cran: PHENIX | Projects | Ecosyste.ms: Papers

10.1038/srep17216

Structure of the Human Factor VIII C2 Domain in Complex with the 3E6 Inhibitory Antibody
Cited by: 5
Author(s): Michelle E. Wuerth, Rebecca K. Cragerud, P. Clint Spiegel
Software Mentions: 1
Published: over 10 years ago

10.1038/srep34756

Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide
Cited by: 34
Author(s): Hiroki Omura, Daisuke Oikawa, Takanori Nakane, Megumi Kato, Ryohei Ishii, Ryuichiro Ishitani, Fuminori Tokunaga, Osamu Nureki
Software Mentions: 1
Published: almost 10 years ago

10.1107/S0909049513022760

Crystal structure of the N-terminal domain of MinC dimerizedviadomain swapping
Cited by: 2
Author(s): Jin Yong An, Tae Kyun Kim, Kyoung Ryoung Park, Jung‐Kyu Lee, Hyung‐Seop Youn, Youngjin Lee, Jung Youn Kang, Gil Bu Kang, Soo Hyun Eom
Software Mentions: 1
Published: almost 13 years ago

10.3390/ijms131114326

Molecular Mechanisms of Pharmaceutical Drug Binding into Calsequestrin
Cited by: 8
Author(s): Arun K Subra, Mark S. Nissen, K.M. Lewis, Ashwin K Muralidharan, E.J. Sanchez, Hendrik Milting, Chulho Kang
Software Mentions: 1
Published: almost 14 years ago

10.3390/ijms15034523

A Preliminary X-ray Study of Murine Tnfaip8/Oxi-α
Cited by: 4
Author(s): Daeun Lee, Mi-Sun Kim, Jimin Park, Gil‐Ja Jhon, Jin H. Son, Dongkun Shin
Software Mentions: 1
Published: over 12 years ago

10.3390/ijms151120736

Structures of the Inducer-Binding Domain of Pentachlorophenol-Degrading Gene Regulator PcpR from Sphingobium chlorophenolicum
Cited by: 17
Author(s): Robert P. Hayes, Timothy W. Moural, K.M. Lewis, David Onofrei, Luying Xun, ChulHee Kang
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-017-16607-8

Structural insights into the potency of SK channel positive modulators
Cited by: 19
Author(s): Young Woo Nam, Razan Orfali, Tingting Liu, Kunqian Yu, Meng Cui, Heike Wulff, Miao Zhang
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-17677-4

Structural insight into a CE15 esterase from the marine bacterial metagenome
Cited by: 17
Author(s): Concetta De Santi, Osman Gani, Ronny Helland, Adele Kim Williamson
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-16876-3

Insulin in motion: The A6-A11 disulfide bond allosterically modulates structural transitions required for insulin activity
Cited by: 27
Author(s): Bianca J. van Lierop, Shee Chee Ong, Alessia Belgi, Carlie Delaine, Sofianos Andrikopoulos, Naomi L. Haworth, John G. Menting, Michael C. Lawrence, Andrea J. Robinson, Briony E. Forbes
Software Mentions: 1
Published: over 8 years ago

10.1016/j.jsb.2016.06.018

Structural and calorimetric studies demonstrate that the hepatocyte nuclear factor 1β (HNF1β) transcription factor is imported into the nucleus via a monopartite NLS sequence
Cited by: 4
Author(s): Mareike M. Wiedmann, Shintaro Aibara, David R. Spring, Murray Stewart, James D. Brenton
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-017-18045-y

A Novel Ultra-Stable, Monomeric Green Fluorescent Protein For Direct Volumetric Imaging of Whole Organs Using CLARITY
Cited by: 59
Author(s): Daniel J. Scott, Natalie Gunn, Kelvin Junwei Yong, Verena C. Wimmer, Nicholas A. Veldhuis, Leesa M. Challis, Mouna Haidar, Steven Petrou, Ross A. D. Bathgate, Michael D. W. Griffin
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms17070988

The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations
Cited by: 8
Author(s): Michelle Schaffer, Guanya Peng, Bernhard Spingler, Joachim Schnabl, Meitian Wang, V. Oliéric, Roland K. O. Sigel
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-018-20067-z

Structural and functional characterization of shaft, anchor, and tip proteins of the Mfa1 fimbria from the periodontal pathogen Porphyromonas gingivalis
Cited by: 22
Author(s): Michael Hall, Yoshinori Hasegawa, Fuminobu Yoshimura, Karina Persson
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms17091539

Characterization of Post-Translational Modifications to Calsequestrins of Cardiac and Skeletal Muscle
Cited by: 13
Author(s): K.M. Lewis, Gerhard R. Munske, S.S. Byrd, Jeehoon Kang, Hyun Jai Cho, Eduardo Rı́os, ChulHee Kang
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-018-20634-4

Structural and mechanistic divergence of the small (p)ppGpp synthetases RelP and RelQ
Cited by: 46
Author(s): Wieland Steinchen, Marian Samuel Vogt, Florian Altegoer, Pietro Ivan Giammarinaro, Petra Horvatek, Christiane Wolz, Gert Bange
Software Mentions: 1
Published: over 8 years ago

10.1038/srep19565

Structural basis for the recognition of two consecutive mutually interacting DPF motifs by the SGIP1 μ homology domain
Cited by: 12
Author(s): Akira Shimada, Atsuko Yamaguchi, Daisuke Kohda
Software Mentions: 1
Published: over 10 years ago

10.1038/srep16915

Structural insights into YfiR sequestering by YfiB in Pseudomonas aeruginosa PAO1
Cited by: 14
Author(s): Shanshan Li, Tingting Li, Yueyang Xu, Qionglin Zhang, Wei Zhang, Shiyou Che, Ruihua Liu, Yingying Wang, Mark Bartlam
Software Mentions: 1
Published: over 10 years ago

10.3390/ijms18071464

Structural Elements Recognized by Abacavir-Induced T Cells
Cited by: 19
Author(s): Daniel Yerly, Y.A. Pompeu, Ryan J. Schutte, Klara Kristin Eriksson, Anette Strhyn, A.W. Bracey, Søren Buus, David A. Ostrov
Software Mentions: 1
Published: about 9 years ago

10.1038/srep33632

Structural basis for disruption of claudin assembly in tight junctions by an enterotoxin
Cited by: 83
Author(s): Takehiro Shinoda, Naoko Shinya, Kaori Ito, Noboru Ohsawa, Takaho Terada, Kunio Hirata, Yoshiaki Kawano, Masaki Yamamoto, Tomomi Kimura‐Someya, Shigeyuki Yokoyama, Mikako Shirouzu
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-018-21476-w

6-Thioguanine is a noncompetitive and slow binding inhibitor of human deubiquitinating protease USP2
Cited by: 40
Author(s): Shang-Ju Chuang, Sha-Yen Cheng, Hui-Chi Tang, Chee‐Ching Sun, Chi-Yuan Chou
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-21955-0

Understanding the Structure, Multimerization, Subcellular Localization and mC Selectivity of a Genomic Mutator and Anti-HIV Factor APOBEC3H
Cited by: 36
Author(s): Fumiaki Ito, Hanjing Yang, Xiao Xiao, Shuxing Li, Aaron Wolfe, Brett Zirkle, В. М. Арутюнян, Xiaojiang S. Chen
Software Mentions: 1
Published: over 8 years ago

10.1038/srep33633

Full-length model of the human galectin-4 and insights into dynamics of inter-domain communication
Cited by: 14
Author(s): Joane K. Rustiguel, Ricardo Oliveira dos Santos Soares, Steve P. Meisburger, Katherine M. Davis, Kristina L. Malzbender, Nozomi Ando, Marcelo Dias‐Baruffi, Maria Cristina Nonato
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijms19092796

CoII(Chromomycin)2 Complex Induces a Conformational Change of CCG Repeats from i-Motif to Base-Extruded DNA Duplex
Cited by: 9
Author(s): Yu‐Wen Chen, Roshan Satange, Pei-Ching Wu, Cyong-Ru Jhan, Chung-ke Chang, Kuang‐Ren Chung, Michael J. Waring, Sheng-Wei Lin, Li-Ching Hsieh, Ming-Hon Hou
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep13133

Structural basis for the neutralization of MERS-CoV by a human monoclonal antibody MERS-27
Cited by: 59
Author(s): Xintong Yu, Senyan Zhang, Liwei Jiang, Ye Cui, Dongxia Li, Dongli Wang, Nianshuang Wang, Lili Fu, Xuanlin Shi, Ziqiang Li, Linqi Zhang, Xinquan Wang
Software Mentions: 1
Published: about 11 years ago

10.1016/j.jsb.2021.107752

Crystal structure of the anti-CRISPR repressor Aca2
Cited by: 6
Author(s): B. F. Usher, Nils Birkholz, Izaak N Beck, Robert D. Fagerlund, Simon A. Jackson, Peter C. Fineran, Tim R. Blower
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms20133247

Crystal Structure of Phosphoserine BlaC from Mycobacterium tuberculosis Inactivated by Bis(Benzoyl) Phosphate
Cited by: 1
Author(s): Timothy W. Moural, Dawanna S. White, Cindy J. Choy, ChulHee Kang, Clifford E. Berkman
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms20174245

Structural Insights into the Interaction of Cytochrome P450 3A4 with Suicide Substrates: Mibefradil, Azamulin and 6′,7′-Dihydroxybergamottin
Cited by: 16
Author(s): Irina F. Sevrioukova
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-25237-7

Structures of Angptl3 and Angptl4, modulators of triglyceride levels and coronary artery disease
Cited by: 33
Author(s): Ekaterina Biterova, Mariam Esmaeeli, Heli I. Alanen, Mirva J. Saaranen, Lloyd W. Ruddock
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-25231-z

Inherent flexibility of CLIC6 revealed by crystallographic and solution studies
Cited by: 15
Author(s): Alisa Ferofontov, Roi Strulovich, Milit Marom, Moshe Giladi, Yoni Haitin
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-25487-5

Patient-derived mutations within the N-terminal domains of p85α impact PTEN or Rab5 binding and regulation
Cited by: 12
Author(s): Paul Mellor, Jeremy Marshall, Xuan Ruan, Dielle E. Whitecross, Rebecca Ross, Margaret A. Knowles, Stanley A. Moore, Deborah H. Anderson
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-25157-6

Functional insights into the interplay between DNA interaction and metal coordination in ferric uptake regulators
Cited by: 13
Author(s): Sabina Sarvan, François Charih, Momen Askoura, James Butcher, J.S. Brunzelle, Alain Stintzi, Jean Couture
Software Mentions: 1
Published: over 8 years ago

10.1016/j.str.2011.11.001

Structure of Ddn, the Deazaflavin-Dependent Nitroreductase from Mycobacterium tuberculosis Involved in Bioreductive Activation of PA-824
Cited by: 77
Author(s): Susan E. Cellitti, Jennifer Shaffer, David H. Jones, Tathagata Mukherjee, Meera Gurumurthy, Badry Bursulaya, Helena I. Boshoff, Inhee Choi, Amit Nayyar, Yong Sok Lee, Joseph Cherian, Pornwaratt Niyomrattanakit, Thomas Dick, Ujjini H. Manjunatha, Clifton E. Barry, Glen Spraggon, Bernhard H. Geierstanger
Software Mentions: 1
Published: over 14 years ago

10.1016/j.str.2015.01.014

Structure of the Ribosomal Oxygenase OGFOD1 Provides Insights into the Regio- and Stereoselectivity of Prolyl Hydroxylases
Cited by: 29
Author(s): Shoichiro Horita, John S. Scotti, Cyrille C. Thinnes, Yousef S. Mottaghi-Taromsari, Armin Thalhammer, Wei Ge, W.S. Aik, Christoph Loenarz, Christopher J. Schofield, M.A. McDonough
Software Mentions: 1
Published: over 11 years ago

10.1016/j.str.2015.05.002

Structural Characterization of the Chaetomium thermophilum TREX-2 Complex and its Interaction with the mRNA Nuclear Export Factor Mex67:Mtr2
Cited by: 20
Author(s): Lyudmila Dimitrova, Eugene Valkov, Shintaro Aibara, Dirk Flemming, Stephen H. McLaughlin, Ed Hurt, Murray Stewart
Software Mentions: 1
Published: about 11 years ago

10.3390/ijms20174301

Active Site Architecture and Reaction Mechanism Determination of Cold Adapted β-d-galactosidase from Arthrobacter sp. 32cB
Cited by: 11
Author(s): Maria Rutkiewicz, A. Bujacz, Marta Wanarska, Anna Wierzbicka-Woś, Hubert Cieśliński
Software Mentions: 1
Published: almost 7 years ago

10.1107/S0909049513020700

X-ray structure determination and deuteration of nattokinase
Cited by: 12
Author(s): Yasuhide Yanagisawa, Toshiyuki Chatake, Sawa Naito, Tadanori Ohsugi, Chieko Yatagai, Hiroyuki Sumi, Akio Kawaguchi, Kaori Chiba-Kamosida, Megumi Ogawa, Tatsumi Adachi, Yukio Morimoto
Software Mentions: 1
Published: almost 13 years ago

10.1016/j.jsb.2016.07.007

The Sac3 TPR-like region in the Saccharomyces cerevisiae TREX-2 complex is more extensive but independent of the CID region
Cited by: 3
Author(s): Shintaro Aibara, Xiao Chen Bai, Murray Stewart
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.str.2015.12.015

Family-wide Structural Analysis of Human Numb-Associated Protein Kinases
Cited by: 113
Author(s): F.J. Sorrell, M. Szklarz, K.R. Abdul Azeez, J.M. Elkins, Stefan Knapp
Software Mentions: 1
Published: over 10 years ago

10.1038/srep32277

Time-dependent X-ray diffraction studies on urea/hen egg white lysozyme complexes reveal structural changes that indicate onset of denaturation
Cited by: 13
Author(s): Tushar Raskar, Sagar Khavnekar, M.V. Hosur
Software Mentions: 1
Published: almost 10 years ago

10.1038/srep31487

Macromolecular structure phasing by neutron anomalous diffraction
Cited by: 13
Author(s): M.G. Cuypers, Sax A. Mason, Estelle Mossou, Michael Haertlein, V. Trevor Forsyth, Edward P. Mitchell
Software Mentions: 1
Published: about 10 years ago

10.1128/JVI.00378-17

Structural Transitions of the Conserved and Metastable Hantaviral Glycoprotein Envelope
Cited by: 34
Author(s): Ilona Rissanen, Robert Stass, Antra Zeltina, Sai Li, Jussi Hepojoki, K. Harlos, Robert J.C. Gilbert, Juha T. Huiskonen, Thomas A. Bowden
Software Mentions: 1
Published: almost 9 years ago

10.1016/j.str.2018.03.014

Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1
Cited by: 30
Author(s): Deg Briggs, Erhard Hohenester
Software Mentions: 1
Published: about 8 years ago

10.1016/j.str.2018.07.011

Insights into Kinesin-1 Activation from the Crystal Structure of KLC2 Bound to JIP3
Cited by: 43
Author(s): J.J.B. Cockburn, Sophie J. Hesketh, Peter O. Mulhair, Maren Thomsen, Mary J. O’Connell, Michael Way
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijms21010308

In Situ Proteolysis Condition-Induced Crystallization of the XcpVWX Complex in Different Lattices
Cited by: 1
Author(s): Yichen Zhang, Shu Wang, Zongchao Jia
Software Mentions: 1
Published: over 6 years ago

10.1016/j.str.2019.06.008

Identification and Characterization of Mutations in Ubiquitin Required for Non-covalent Dimer Formation
Cited by: 4
Author(s): Mads Gabrielsen, Lori Buetow, Dominika Kowalczyk, Wei Zhang, Sachdev S. Sidhu, Danny T. Huang
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.str.2019.06.005

Structural Basis for Recruitment of DAPK1 to the KLHL20 E3 Ligase
Cited by: 18
Author(s): Zhuoyao Chen, S. Picaud, P. Filippakopoulos, Vincenzo D’Angiolella, Alex N. Bullock
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.str.2019.09.010

Combining Transient Expression and Cryo-EM to Obtain High-Resolution Structures of Luteovirid Particles
Cited by: 22
Author(s): Matthew J. Byrne, John F. C. Steele, Emma L. Hesketh, Miriam Walden, Rebecca Thompson, George P. Lomonossoff, Neil A. Ranson
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms21010280

GTP Preference of d-Glycero-α-d-manno-Heptose-1-Phosphate Guanylyltransferase from Yersinia pseudotuberculosis
Cited by: 6
Author(s): Suwon Kim, Mi Sun Kim, Seri Jo, Dongkun Shin
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms21030915

Phenylthiourea Binding to Human Tyrosinase-Related Protein 1
Cited by: 11
Author(s): Xuelei Lai, Harry J. Wichers, Montserrat Soler-López, Bauke W. Dijkstra
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms21051689

N-terminal Backbone Pairing Shifts in CCL5-12AAA14 Dimer Interface: Structural Significance of the FAY Sequence
Cited by: 1
Author(s): Jin-Ye Li, Yi‐Chen Chen, Yi-Zong Lee, Chun‐Hsiang Huang, Shih‐Che Sue
Software Mentions: 1
Published: over 6 years ago

10.1016/j.str.2020.01.003

MyD88 Death-Domain Oligomerization Determines Myddosome Architecture: Implications for Toll-like Receptor Signaling
Cited by: 39
Author(s): Martin C. Moncrieffe, Daniel Bollschweiler, Bing Li, Pawel A. Penczek, Lee Hopkins, Clare E. Bryant, David Klenerman
Software Mentions: 1
Published: over 6 years ago

10.1016/j.str.2020.01.005

Structural Basis for Rab8a Recruitment of RILPL2 via LRRK2 Phosphorylation of Switch 2
Cited by: 51
Author(s): Dieter Waschbüsch, Elena Purlyte, Prosenjit Pal, Emma McGrath, Dario R. Alessi, Amir R. Khan
Software Mentions: 1
Published: over 6 years ago

10.1016/j.yjsbx.2021.100044

Structural basis of enzyme activity regulation by the propeptide of l-lysine α-oxidase precursor from Trichoderma viride
Cited by: 2
Author(s): Masaki Kawamura, Norihisa Ito, Yuya Matsumoto, Masaya Saito, Takashi Tamura, Hitoshi Kusakabe, Kenji Inagaki, Katsumi Imada
Software Mentions: 1
Published: over 5 years ago

10.1038/srep30442

Cell-free methods to produce structurally intact mammalian membrane proteins
Cited by: 52
Author(s): Takehiro Shinoda, Naoko Shinya, Kaori Ito, Yoshiko Ishizuka-Katsura, Noboru Ohsawa, Takaho Terada, Kunio Hirata, Yoshiaki Kawano, Masaki Yamamoto, Taisuke Tomita, Yoshihiro Ishibashi, Yoshio Hirabayashi, Tomomi Kimura‐Someya, Mikako Shirouzu, Shigeyuki Yokoyama
Software Mentions: 1
Published: about 10 years ago

10.1107/S0909049513022164

Creation and structure determination of an artificial protein with three complete sequence repeats
Cited by: 2
Author(s): Motoyasu Adachi, R Shimizu, Ryota Kuroki, Michael Blaber
Software Mentions: 1
Published: almost 13 years ago

10.1038/srep29457

Dual thio-digalactoside-binding modes of human galectins as the structural basis for the design of potent and selective inhibitors
Cited by: 66
Author(s): T.J. Hsieh, Hsien Ya Lin, Zhijay Tu, Ting Chien Lin, Shang-Chuen Wu, Yu Yao Tseng, Fu‐Tong Liu, Shang-Te Danny Hsu, Chun Hung Lin
Software Mentions: 1
Published: about 10 years ago

10.3390/ijms21113940

The Structural Basis of the Binding of Various Aminopolycarboxylates by the Periplasmic EDTA-Binding Protein EppA from Chelativorans sp. BNC1
Cited by: 3
Author(s): K.M. Lewis, C.L. Greene, S.A. Sattler, BuHyun Youn, Luying Xun, ChulHee Kang
Software Mentions: 1
Published: about 6 years ago

10.1016/j.yjsbx.2020.100021

Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain
Cited by: 4
Author(s): David Kalbermatter, Neeta Shrestha, Flavio M. Gall, Marianne Wyss, Rainer Riedl, Philippe Plattet, Dimitrios Fotiadis
Software Mentions: 1
Published: over 6 years ago

10.1038/srep28664

New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit
Cited by: 17
Author(s): Priyanka Chaurasia, Shivendra Pratap, Ingemar von Ossowski, Airi Palva, Vengadesan Krishnan
Software Mentions: 1
Published: about 10 years ago

10.3390/toxins10030108

Structural Basis for the Specific Neutralization of Stx2a with a Camelid Single Domain Antibody Fragment
Cited by: 18
Author(s): Robert Alvin Bernedo-Navarro, Ema Romão, Tomomasa Yano, Joar Pinto, Henri De Greve, Yann G.J. Sterckx, Serge Muyldermans
Software Mentions: 1
Published: over 8 years ago

10.3390/toxins12060380

mRNA Interferase Bacillus cereus BC0266 Shows MazF-Like Characteristics Through Structural and Functional Study
Cited by: 4
Author(s): Sung-Min Kang, Ji Sung Koo, In Soo Kim, Do-Hee Kim, Bong-Jin Lee
Software Mentions: 1
Published: about 6 years ago

10.3390/toxins12070438

Structural and Functional Insights into the C-terminal Fragment of Insecticidal Vip3A Toxin of Bacillus thuringiensis
Cited by: 17
Author(s): Kun Jiang, Yan Zhang, Zhe Chen, Dalei Wu, Jin Cai, Xiang Gao
Software Mentions: 1
Published: about 6 years ago

10.3390/toxins12100616

Two VHH Antibodies Neutralize Botulinum Neurotoxin E1 by Blocking Its Membrane Translocation in Host Cells
Cited by: 5
Author(s): Kwok Ho Lam, Kay Perry, Charles B. Shoemaker, Rongsheng Jin
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.yjsbx.2021.100049

Structural characterization of two solute-binding proteins for N,N′-diacetylchitobiose/N,N′,N′′-triacetylchitotoriose of the gram-positive bacterium, Paenibacillus sp. str. FPU-7
Cited by: 0
Author(s): Takafumi Itoh, Misaki Yaguchi, Akari Nakaichi, Moe Yoda, Takao Hibi, Hisashi Kimoto
Software Mentions: 1
Published: over 5 years ago

10.1038/s41398-018-0258-8

Genome-wide association study identifies glutamate ionotropic receptor GRIA4 as a risk gene for comorbid nicotine dependence and major depression
Cited by: 11
Author(s): Hang Zhou, Zhongshan Cheng, Nick Bass, John H. Krystal, Lindsay A. Farrer, Henry R. Kranzler, Joel Gelernter
Software Mentions: 1
Published: almost 8 years ago

10.1101/2020.06.08.141267

Structural basis of a public antibody response to SARS-CoV-2
Cited by: 18
Author(s): Meng Yuan, Hejun Liu, Nicholas C. Wu, Chang-Chun David Lee, Xueyong Zhu, Fangzhu Zhao, Deli Huang, Wenli Yu, Yuanzi Hua, Henry J Tien, Thomas F. Rogers, Elise Landais, Devin Sok, Joseph G. Jardine, Dennis R. Burton, Ian A. Wilson
Software Mentions: 1
Published: about 6 years ago

10.1101/2020.08.02.233536

Cross-neutralization of a SARS-CoV-2 antibody to a functionally conserved site is mediated by avidity
Cited by: 13
Author(s): Hejun Liu, Nicholas C. Wu, Meng Yuan, Sandhya Bangaru, Jonathan L. Torres, Tom G. Caniels, Jelle van Schooten, Xueyong Zhu, Chang-Chun David Lee, Philip J.M. Brouwer, Marit J. van Gils, Rogier W. Sanders, Andrew B. Ward, Ian A. Wilson
Software Mentions: 1
Published: about 6 years ago

10.1101/2021.01.26.428356

Sequence signatures of two IGHV3-53/3-66 public clonotypes to SARS-CoV-2 receptor binding domain
Cited by: 3
Author(s): Timothy J.C. Tan, Meng Yuan, Kaylee Kuzelka, Gilberto C Padron, Jacob R. Beal, Xin Chen, Yiquan Wang, Joel Rivera-Cardona, Xueyong Zhu, Beth M. Stadtmueller, Christopher B. Brooke, Ian A. Wilson, Nicholas C. Wu
Software Mentions: 1
Published: over 5 years ago

10.1101/2020.09.18.302901

SARS-CoV-2 Nsp1 suppresses host but not viral translation through a bipartite mechanism
Cited by: 34
Author(s): Ming Shi, Long Wang, Pietro Fontana, Setu M. Vora, Ying Zhang, Tian‐Min Fu, Judy Lieberman, Hao Wu
Software Mentions: 1
Published: almost 6 years ago

10.1101/2020.09.21.305441

A natural mutation between SARS-CoV-2 and SARS-CoV determines neutralization by a cross-reactive antibody
Cited by: 4
Author(s): Nicholas C. Wu, Meng Yuan, Sandhya Bangaru, Deli Huang, Xueyong Zhu, Chang-Chun David Lee, Hannah L. Turner, Linghang Peng, Linlin Yang, David Nemazee, Andrew B. Ward, Ian A. Wilson
Software Mentions: 1
Published: almost 6 years ago

10.1101/2021.04.01.437942

Ultrapotent bispecific antibodies neutralize emerging SARS-CoV-2 variants
Cited by: 6
Author(s): Hyeseon Cho, Kristina Kay Gonzales-Wartz, Deli Huang, Meng Yuan, Mary Peterson, Janie Liang, Nathan Beutler, Jonathan L. Torres, Cong Yu, Elena Postnikova, Sandhya Bangaru, Chloe Adrienna Talana, Wei Shi, Eun Sung Yang, Yi Zhang, Kwanyee Leung, Lingshu Wang, Linghang Peng, Jeff Skinner, Shanping Li, Nicholas C. Wu, Hejun Liu, Cherrelle Dacon, Thomas P. Moyer, Melanie Cohen, Ming Zhao, F. Eun-Hyung Lee, Rona Singer Weinberg, Iyadh Douagi, Robin Gross, Connie S. Schmaljohn, Amarendra Pegu, John R. Mascola, Michael R. Holbrook, David Nemazee, Thomas F. Rogers, Andrew B. Ward, Ian A. Wilson, Peter D. Crompton, Joshua Tan
Software Mentions: 1
Published: over 5 years ago

10.1128/mBio.00492-16

Structures of Pathogenic Fungal FKBP12s Reveal Possible Self-Catalysis Function
Cited by: 30
Author(s): Nam K. Tonthat, Praveen R. Juvvadi, Hengshan Zhang, Soo Chan Lee, Ronald A. Venters, Leonard D. Spicer, William J. Steinbach, Joseph Heitman, Maria A. Schumacher
Software Mentions: 1
Published: over 10 years ago

10.1128/mBio.00872-16

Molecular Insights into the Fungus-Specific Serine/Threonine Protein Phosphatase Z1 in Candida albicans
Cited by: 21
Author(s): Emily Chen, M.S. Choy, Katalin Petrényi, Zoltán Kónya, Ferenc Erdődi, Viktor Dombrádi, Wolfgang Peti, Rebecca Page
Software Mentions: 1
Published: almost 10 years ago

10.1128/mBio.01543-16

Emergence of a Potent Multidrug Efflux Pump Variant That Enhances Campylobacter Resistance to Multiple Antibiotics
Cited by: 81
Author(s): Hong Yao, Zhangqi Shen, Yang Wang, Fengru Deng, Dejun Liu, Gaowa Naren, Lei Dai, Chih‐Chia Su, Bing Wang, Shaolin Wang, Congming Wu, Edward Yu, Qijing Zhang, Jianzhong Shen
Software Mentions: 1
Published: almost 10 years ago

10.1038/srep27498

Structural and biochemical characterization of the cell fate determining nucleotidyltransferase fold protein MAB21L1
Cited by: 33
Author(s): Carina C. de Oliveira Mann, R. Kiefersauer, Gregor Witte, Karl‐Peter Hopfner
Software Mentions: 1
Published: about 10 years ago

10.1128/mBio.00225-17

Antibiotic Capture by Bacterial Lipocalins Uncovers an Extracellular Mechanism of Intrinsic Antibiotic Resistance
Cited by: 28
Author(s): Omar M. El-Halfawy, Javier Klett, Rebecca J. Ingram, Slade A. Loutet, M.E.P. Murphy, Sonsoles Martín‐Santamaría, Miguel A. Valvano
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms21175977

Lard Injection Matrix for Serial Crystallography
Cited by: 25
Author(s): Ki Hyun Nam
Software Mentions: 1
Published: about 6 years ago

10.1107/S0909049513021572

Structural studies of haemoglobin from pisces species shortfin mako shark (Isurus oxyrinchus)at 1.9 Å resolution
Cited by: 5
Author(s): Ramesh Pandian, S. Sundaresan, Pon. Sathya Moorthy, Mahalingam Balasubramanian, M. N. Ponnuswamy
Software Mentions: 1
Published: almost 13 years ago

10.1128/mBio.00674-17

Curative Treatment of Severe Gram-Negative Bacterial Infections by a New Class of Antibiotics Targeting LpxC
Cited by: 21
Author(s): Nadine Lemaître, Xiaofei Liang, Javaria Najeeb, Chul‐Jin Lee, Marie Titécat, Emmanuelle Leteurtre, Michel Simonet, Eric J. Toone, Pei Zhou, Florent Sebbane
Software Mentions: 1
Published: almost 9 years ago

10.1128/mBio.00787-17

Crystal Structures of Two Immune Complexes Identify Determinants for Viral Infectivity and Type-Specific Neutralization of Human Papillomavirus
Cited by: 17
Author(s): Zhihai Li, Daning Wang, Ying Gu, Shuo Song, Maozhou He, Jingjie Shi, Xinlin Liu, Shuangping Wei, Jinjin Li, Hai Yu, Qingbing Zheng, Xiaodong Yan, Timothy S. Baker, Jun Zhang, Jason S. McLellan, Ningshao Xia
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijms21197166

Repurposing Benzbromarone for Familial Amyloid Polyneuropathy: A New Transthyretin Tetramer Stabilizer
Cited by: 15
Author(s): Ellen Y Cotrina, Â. Oliveira, José P. Leite, Jordi Llop, Luı́s Gales, Jordi Quintana, Isabel Cardoso, Gemma Arsequell
Software Mentions: 1
Published: almost 6 years ago

10.1038/srep25961

X-Ray Structure and Inhibition of 3C-like Protease from Porcine Epidemic Diarrhea Virus
Cited by: 11
Author(s): Sarah E. St. John, Brandon Anson, Andrew D. Mesecar
Software Mentions: 1
Published: over 10 years ago

10.1128/mBio.01346-18

Structural Analysis of the Interaction between the Bacterial Cell Division Proteins FtsQ and FtsB
Cited by: 38
Author(s): Danguole Kureisaite-Ciziene, Aravindan Varadajan, Stephen H. McLaughlin, Marjolein Glas, Alejandro Montón Silva, Rosa A. Luirink, Carolin Mueller, Tanneke den Blaauwen, Tom N. Grossmann, Joen Luirink, Jan Löwe
Software Mentions: 1
Published: almost 8 years ago

10.1128/mBio.01784-18

The Protozoan Trichomonas vaginalis Targets Bacteria with Laterally Acquired NlpC/P60 Peptidoglycan Hydrolases
Cited by: 19
Author(s): Jully Pinheiro, Jacob Biboy, Waldemar Vollmer, Robert P. Hirt, J.R. Keown, Anastasiia Artuyants, Moyra M. Black, David C. Goldstone, Augusto Simões-Barbosa
Software Mentions: 1
Published: over 7 years ago

10.1038/srep24788

The structural basis of chicken, swine and bovine CD8αα dimers provides insight into the co-evolution with MHC I in endotherm species
Cited by: 9
Author(s): Yanjie Liu, Xin Li, Jianxun Qi, Nianzhi Zhang, Chun Xia
Software Mentions: 1
Published: over 10 years ago

10.3390/ijms21197375

Crystal Structure of Non-Structural Protein 10 from Severe Acute Respiratory Syndrome Coronavirus-2
Cited by: 45
Author(s): Annika Rogstam, Maria Nyblom, Steffan Wittrup Christensen, C. Sele, V. Talibov, Therese Lindvall, Anna Andersson Rasmussen, Ingemar André, S.Z. Fisher, Wolfgang Knecht, Frank Kozielski
Software Mentions: 1
Published: almost 6 years ago

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Science Score: 75/100

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Papers Mentioning PHENIX 2,287