cran: PHENIX | Projects | Ecosyste.ms: Papers

10.1038/s41598-018-34171-7

Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis
Cited by: 337
Author(s): Robert N. Kirchdoerfer, Nianshuang Wang, Jesper Pallesen, Daniel Wrapp, Hannah L. Turner, Christopher A. Cottrell, Kizzmekia S. Corbett, Barney S. Graham, Jason S. McLellan, Andrew B. Ward
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-34176-2

Direct visualization of DNA baton pass between replication factors bound to PCNA
Cited by: 9
Author(s): Kouta Mayanagi, Sonoko Ishino, Tomoyuki Shirai, Takuji Oyama, Shinichi Kiyonari, Daisuke Kohda, Kosuke Morikawa, Yuji Ishino
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-34615-0

Crystal Structure of Human Nocturnin Catalytic Domain
Cited by: 13
Author(s): Michael Estrella, Jin Du, Alexei Korennykh
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-35754-0

High resolution X-ray and NMR structural study of human T-cell immunoglobulin and mucin domain containing protein-3
Cited by: 28
Author(s): Amit Gandhi, Walter M. Kim, Zhenyu Sun, Yu‐Hwa Huang, Daniel A. Bonsor, Eric J. Sundberg, Yasuyuki Kondo, Gerhard Wagner, Vijay K. Kuchroo, Gregory A. Petsko, Richard S. Blumberg
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-37417-6

Structure and function of the Ts2631 endolysin of Thermus scotoductus phage vB_Tsc2631 with unique N-terminal extension used for peptidoglycan binding
Cited by: 26
Author(s): Magdalena Płotka, Enea Sancho‐Vaello, Sebastian Dorawa, Anna-Karina Kaczorowska, Łukasz P. Kozłowski, Tadeusz Kaczorowski, Kornelius Zeth
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-39687-0

Biochemical and structural characterization of tomato polyphenol oxidases provide novel insights into their substrate specificity
Cited by: 34
Author(s): Ioannis Kampatsikas, Aleksandar Bijelic, Annette Rompel
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-40937-4

An Effective Neutralizing Antibody Against Influenza Virus H1N1 from Human B Cells
Cited by: 12
Author(s): Cheng-Chung Lee, Chih-Ya Yang, Long-Yau Lin, Tzu‐Ping Ko, Alarng Hsun-Lang Chang, Stanley Shi-Chung Chang, Andrew H.‐J. Wang
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-40879-x

Crystal structure and epitope analysis of house dust mite allergen Der f 21
Cited by: 13
Author(s): Sze Lei Pang, Ken Ho, Jitka Waterman, Robert P. Rambo, Aik-Hong Teh, Indran Mathavan, Gemma Harris, Konstantinos Beis, Yee‐How Say, Matta Sri Anusha, Yang Yie Sio, Fook Tim Chew, Chyan Leong Ng
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-41354-3

Structural determinants of inhibition of Porphyromonas gingivalis gingipain K by KYT-36, a potent, selective, and bioavailable peptidase inhibitor
Cited by: 14
Author(s): Tibisay Guevara, Arturo Rodríguez-Banqueri, Anna M. Łasica, Mirosław Książek, Barbara Potempa, Jan Potempa, F. Xavier Gomis‐Rüth
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-41498-2

Position 123 of halohydrin dehalogenase HheG plays an important role in stability, activity, and enantioselectivity
Cited by: 12
Author(s): Jennifer Solarczek, Thomas Klünemann, Felix Brandt, Patrick Schrepfer, Mario Wolter, Christoph R. Jacob, Wulf Blankenfeldt, Anett Schallmey
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-43577-w

Structural Insights into Catalytic Versatility of the Flavin-dependent Hydroxylase (HpaB) from Escherichia coli
Cited by: 12
Author(s): Xiaolin Shen, Da‐Yong Zhou, Yuheng Lin, Jia Wang, Shuaihua Gao, P. Kandavelu, Hua Zhang, Ruihua Zhang, Bi-Cheng Wang, John P. Rose, Qipeng Yuan, Yajun Yan
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-43932-x

Structural and functional characterization of the PDZ domain of the human phosphatase PTPN3 and its interaction with the human papillomavirus E6 oncoprotein
Cited by: 18
Author(s): Mariano Genera, Diana Samson, Bertrand Raynal, Ahmed Haouz, Bruno Baron, Catherine Simenel, Raphaël Guérois, Nicolas Wolff, Célia Caillet‐Saguy
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-44108-3

FABP1 controls hepatic transport and biotransformation of Δ9-THC
Cited by: 15
Author(s): Matthew W. Elmes, Lauren E. Prentis, L.L. McGoldrick, Christopher J. Giuliano, Joseph Sweeney, Olivia M. Joseph, Joyce Che, Gregory Carbonetti, Keith M. Studholme, Dale G. Deutsch, Robert C. Rizzo, Steven E. Glynn, Martin Kaczocha
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-44943-4

Recombinant production, purification, crystallization, and structure analysis of human transforming growth factor β2 in a new conformation
Cited by: 7
Author(s): Laura del Amo-Maestro, Laura Marino‐Puertas, Theodoros Goulas, F. Xavier Gomis‐Rüth
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-48019-1

Exit tunnel modulation as resistance mechanism of S. aureus erythromycin resistant mutant
Cited by: 31
Author(s): Y. Halfon, Donna Matzov, Zohar Eyal, Anat Bashan, Ella Zimmerman, Jette Sejer Kjeldgaard, Hanne Ingmer, Ada Yonath
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-48850-6

The complex structure of bile salt hydrolase from Lactobacillus salivarius reveals the structural basis of substrate specificity
Cited by: 13
Author(s): Fanxing Xu, Xiaojian Hu, Warispreet Singh, Wenjing Geng, Irina G. Tikhonova, Jun Lin
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-50249-2

Structural insight into glucose repression of the mannitol operon
Cited by: 9
Author(s): Mangyu Choe, Huitae Min, Young Ha Park, Yeon Ran Kim, Jae Sung Woo, Yeong‐Jae Seok
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-51006-1

Structural and biochemical characterisation of a novel alginate lyase from Paenibacillus sp. str. FPU-7
Cited by: 24
Author(s): Takafumi Itoh, Emi Nakagawa, Moe Yoda, Akari Nakaichi, Takao Hibi, Hisashi Kimoto
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-52703-7

Structural insights into mutagenicity of anticancer nucleoside analog cytarabine during replication by DNA polymerase η
Cited by: 5
Author(s): Olga Rechkoblit, Robert E. Johnson, Angeliki Buku, Louise Prakash, Satya Prakash, Aneel K. Aggarwal
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-020-57675-7

Viscosity-adjustable grease matrices for serial nanocrystallography
Cited by: 11
Author(s): Michihiro Sugahara, K. Motomura, Mamoru Suzuki, Tetsuya Masuda, Yasumasa Joti, Keiji Numata, Kensuke Tono, Makina Yabashi, Tetsuya Ishikawa
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-59446-w

What does fluorine do to a protein? Thermodynamic, and highly-resolved structural insights into fluorine-labelled variants of the cold shock protein
Cited by: 27
Author(s): Hannah Welte, Tiankun Zhou, Xenia Mihajlenko, Olga Mayans, Michael Kovermann
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-64527-x

Structural Basis for PPARα Activation by 1H-pyrazolo-[3,4-b]pyridine Derivatives
Cited by: 4
Author(s): Takuya Yoshida, Hiroya Oki, Masamitsu Doi, Syohei Fukuda, Tomohiro Yuzuriha, Ryotaro Tabata, Kenji Ishimoto, Kazuki Kawahara, Tadayasu Ohkubo, Hiroyuki Miyachi, Takefumi Doi, Keisuke Tachibana
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-64792-w

The pivot point arginines identified in the β-pinwheel structure of C-terminal domain from Salmonella Typhi DNA Gyrase A subunit
Cited by: 1
Author(s): Ekta Sachdeva, Gurpreet Kaur, Pragya Tiwari, Deepali Gupta, T.P. Singh, A.S. Ethayathulla, Punit Kaur
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-65123-9

Aspartate/asparagine-β-hydroxylase: a high-throughput mass spectrometric assay for discovery of small molecule inhibitors
Cited by: 14
Author(s): Lennart Brewitz, Anthony Tumber, Inga Pfeffer, M.A. McDonough, Christopher J. Schofield
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-66050-5

A disulfide constrains the ToxR periplasmic domain structure, altering its interactions with ToxS and bile-salts
Cited by: 8
Author(s): Charles R. Midgett, Rachel A. Swindell, Maria Pellegrini, F. Jon Kull
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-67069-4

Structural and enzymatic characterisation of the Type III effector NopAA (=GunA) from Sinorhizobium fredii USDA257 reveals a Xyloglucan hydrolase activity
Cited by: 4
Author(s): Jonathan Dorival, Sonia Philys, Elisa Giuntini, Romain Brailly, Jérôme de Ruyck, Mirjam Czjzek, Emanuele G. Biondi, Coralie Bompard
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-68502-4

Structural basis of SALM3 dimerization and synaptic adhesion complex formation with PTPσ
Cited by: 3
Author(s): Sudeep Karki, Alexander V. Shkumatov, Sungchul Bae, Hyeonho Kim, Jaewon Ko, Tommi Kajander
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-68355-x

The discovery of a new antibody for BRIL-fused GPCR structure determination
Cited by: 19
Author(s): Hikaru Miyagi, Hidetsugu Asada, Mina Suzuki, Yuichi Takahashi, Mai Yasunaga, Chiyo Suno, So Iwata, Junichi Saito
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-68612-z

Structure and mechanism of potent bifunctional β-lactam- and homoserine lactone-degrading enzymes from marine microorganisms
Cited by: 10
Author(s): Christopher Selleck, Marcelo Monteiro Pedroso, Liam A. Wilson, Stefan Krco, Esmée Gianna Knaven, Manfredi Miraula, Nataša Mitić, James A. Larrabee, Thomas Brück, Alice M. Clark, Luke W. Guddat
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-73452-y

The crystal structure of mycobacterial epoxide hydrolase A
Cited by: 3
Author(s): Eike C. Schulz, Sara R. Henderson, Boris Illarionov, Thomas Crosskey, Stacey M. Southall, Boris Krichel, Charlotte Uetrecht, Markus Fischer, Matthias Wilmanns
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-78148-x

Structural analysis and insight into effector binding of the niacin-responsive repressor NiaR from Bacillus halodurans
Cited by: 2
Author(s): Jun Young Lee, Young Woo Park, Myung Yeon Lee, Kang Hwa Jeong, Jae Young Lee
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-79654-8

Linker histone defines structure and self-association behaviour of the 177 bp human chromatosome
Cited by: 14
Author(s): Qianqian Wang, Vinod K. Vogirala, Aghil Soman, Nikolay V. Berezhnoy, Zhehui Barry Liu, Andrew Barnabas Wong, Nikolay Korolev, Chun‐Jen Su, Sara Sandin, Lars Nordenskiöld
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-80588-4

Discovery of small molecules targeting the tandem tudor domain of the epigenetic factor UHRF1 using fragment-based ligand discovery
Cited by: 14
Author(s): Lyra Chang, James C. Campbell, Idris Raji, Shiva Krishna Reddy Guduru, Prasanna Kandel, Michelle Nguyen, Steven Liu, Kevin Tran, Navneet K Venugopal, Bethany C Taylor, Matthew V. Holt, Nicolas L. Young, Errol L. G. Samuel, Prashi Jain, Conrad Santini, Banumathi Sankaran, Kevin R. MacKenzie, Damian W. Young
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-83438-z

Three-dimensional structure of human cyclooxygenase (hCOX)-1
Cited by: 24
Author(s): Morena Miciaccia, Benny Danilo Belviso, Mariaclara Iaselli, Gino Cingolani, Savina Ferorelli, Marianna Cappellari, Paola Loguercio Polosa, Maria Grazia Perrone, Rocco Caliandro, Antonio Scilimati
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-85559-x

Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity
Cited by: 12
Author(s): Naazneen Khan, Tatsuya Arai, Sakae Tsuda, Hidemasa Kondo
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-89785-1

A PROSS-designed extensively mutated estrogen receptor α variant displays enhanced thermal stability while retaining native allosteric regulation and structure
Cited by: 12
Author(s): Mark Kriegel, Hanna J. Wiederanders, Sewar Alkhashrom, Jutta Eichler, Yves A. Muller
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-91596-3

Anthrax toxin translocation complex reveals insight into the lethal factor unfolding and refolding mechanism
Cited by: 5
Author(s): Alexandra J. Machen, Mark T. Fisher, Bret Freudenthal
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92554-9

Stereoselective synthesis of a 4-⍺-glucoside of valienamine and its X-ray structure in complex with Streptomyces coelicolor GlgE1-V279S
Cited by: 2
Author(s): Anshupriya Si, Thilina D. Jayasinghe, Radhika Thanvi, Sunayana Kapil, Donald R. Ronning, Steven J. Sucheck
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-95123-2

Structure of the master regulator Rns reveals an inhibitor of enterotoxigenic Escherichia coli virulence regulons
Cited by: 9
Author(s): Charles R. Midgett, Kacey Marie Talbot, Jessica L. Day, George P. Munson, F. Jon Kull
Software Mentions: 1
Published: about 5 years ago

10.1038/s41392-021-00712-2

Structural and functional basis for pan-CoV fusion inhibitors against SARS-CoV-2 and its variants with preclinical evaluation
Cited by: 33
Author(s): Shuai Xia, Qiaoshuai Lan, Yun Zhu, Chao Wang, Wei Xu, Yutang Li, Lijue Wang, Fanke Jiao, Jie Zhou, Hua Chen, Qian Wang, Xiujun Cai, Yang Wu, Jie Gao, Huan Liu, Ge Sun, Jan Münch, Frank Kirchhoff, Zhenghong Yuan, Youhua Xie, Fei Sun, Shibo Jiang, Lu Lu
Software Mentions: 1
Published: about 5 years ago

10.1186/1751-0473-7-5

Automatic Fortran to C++ conversion with FABLE
Cited by: 13
Author(s): Ralf W. Grosse‐Kunstleve, Thomas C. Terwilliger, Nicholas K. Sauter, Paul D. Adams
Software Mentions: 1
Published: over 14 years ago

10.1063/1.4984052

Structural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity
Cited by: 8
Author(s): Donghyun Ka, Sung Kyu Hong, Ugeene Jeong, Migyeong Jeong, Nayoung Suh, Jeong‐Yong Suh, Euiyoung Bae
Software Mentions: 1
Published: over 9 years ago

10.1063/1.5092803

Structural and dynamical description of the enzymatic reaction of a phosphohexomutase
Cited by: 7
Author(s): Kyle M. Stiers, Abigail C. Graham, Jian‐She Zhu, David L. Jakeman, Jay C. Nix, Lesa J. Beamer
Software Mentions: 1
Published: over 7 years ago

10.1063/1.5120527

High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures
Cited by: 16
Author(s): Juan Sanchez, Melissa Carrillo, Suraj Pandey, Moraima Noda, Luis Aldama, Denisse Feliz, Elin Claesson, Weixiao Yuan Wahlgren, Gregory Tracy, Phu Duong, Angela C. Nugent, Andrew Field, V. Šrajer, Christopher Kupitz, So Iwata, Eriko Nango, Rie Tanaka, Tomoyuki Tanaka, Luo Fangjia, Kensuke Tono, Shigeki Owada, Sebastian Westenhoff, Marius Schmidt, Emina A. Stojković
Software Mentions: 1
Published: about 7 years ago

10.1063/1.5130582

Conformational sampling and kinetics changes across a non-Arrhenius break point in the enzyme thermolysin
Cited by: 3
Author(s): Ming Dong, Mackenzie L. Lauro, Timothy J. Koblish, Brian J. Bahnson
Software Mentions: 1
Published: over 6 years ago

10.1016/j.str.2012.08.011

The CDK9 Tail Determines the Reaction Pathway of Positive Transcription Elongation Factor b
Cited by: 31
Author(s): Sonja Baumli, A.J. Hole, Lan-Zhen Wang, M.E.M. Noble, Jane Endicott
Software Mentions: 1
Published: almost 14 years ago

10.1016/j.str.2008.08.007

Structural Analysis of the Interactions Between Paxillin LD Motifs and α-Parvin
Cited by: 35
Author(s): Sonja Lorenz, Ioannis Vakonakis, E.D. Lowe, Iain D. Campbell, M.E.M. Noble, M.K. Hoellerer
Software Mentions: 1
Published: almost 18 years ago

10.1016/j.str.2008.05.006

Structural Basis for the Recognition of Histone H4 by the Histone-Chaperone RbAp46
Cited by: 193
Author(s): Natalia V. Murzina, X.Y. Pei, Wei Zhang, Mike Sparkes, Jose Vicente-Garcia, J. Venkatesh Pratap, Stephen H. McLaughlin, Tom Rolef Ben-Shahar, Alain Verreault, Ben F. Luisi, Ernest D. Laue
Software Mentions: 1
Published: about 18 years ago

10.1016/j.str.2014.11.020

Local Error Estimates Dramatically Improve the Utility of Homology Models for Solving Crystal Structures by Molecular Replacement
Cited by: 19
Author(s): G. Bunkóczi, Björn Wallner, Randy J. Read
Software Mentions: 1
Published: over 11 years ago

10.1084/jem.20191957

Metabolic bifunctionality of Rv0812 couples folate and peptidoglycan biosynthesis in Mycobacterium tuberculosis
Cited by: 4
Author(s): Katherine A. Black, Lei Duan, Lungelo Mandyoli, Bruna Pelegrim Selbach, Weizhen Xu, Sabine Ehrt, James C. Sacchettini, Kyu Y. Rhee
Software Mentions: 1
Published: over 5 years ago

10.1186/s13045-021-01032-2

Recurrent XPO1 mutations alter pathogenesis of chronic lymphocytic leukemia
Cited by: 25
Author(s): J. T. Walker, Zachary A. Hing, Bonnie K. Harrington, J.M. Baumhardt, Hatice Gülçin Özer, Amy Lehman, Brian Giacopelli, Larry Beaver, Katie Williams, Jordan Skinner, Casey B. Cempre, Qingxiang Sun, Sharon Shacham, Benjamin R. Stromberg, Matthew K. Summers, Lynne V. Abruzzo, Laura Z. Rassenti, Thomas J. Kipps, Sameer A. Parikh, Neil E. Kay, Kerry A. Rogers, Jennifer A. Woyach, Vincenzo Coppola, Yuh Min Chook, Christopher C. Oakes, John C. Byrd, Rosa Lapalombella
Software Mentions: 1
Published: over 5 years ago

10.1016/j.ijpddr.2016.02.001

The Ascaris suum nicotinic receptor, ACR-16, as a drug target: Four novel negative allosteric modulators from virtual screening
Cited by: 15
Author(s): Fudan Zheng, Alan P. Robertson, Melanie Abongwa, Edward Yu, R. J. Martin
Software Mentions: 1
Published: over 10 years ago

10.4049/jimmunol.1303142

Mutational and Structural Analysis of KIR3DL1 Reveals a Lineage-Defining Allotypic Dimorphism That Impacts Both HLA and Peptide Sensitivity
Cited by: 46
Author(s): Geraldine M. O’Connor, J.P. Vivian, Jacqueline M.L. Widjaja, John S. Bridgeman, Emma Gostick, Bernard A. P. Lafont, Stephen Anderson, David A. Price, Andrëw G. Brööks, Jamie Rossjohn, Daniel W. McVicar
Software Mentions: 1
Published: over 12 years ago

10.1016/j.jinorgbio.2016.07.013

Use of ferrous iron by metallo-β-lactamases
Cited by: 20
Author(s): Samuel T. Cahill, Hanna Tarhonskaya, Anna M. Rydzik, Emily Flashman, M.A. McDonough, Christopher J. Schofield, Jürgen Brem
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.jinorgbio.2018.08.002

Structural and catalytic properties of the peroxygenase P450 enzyme CYP152K6 from Bacillus methanolicus
Cited by: 14
Author(s): Hazel M. Girvan, Harshwardhan Poddar, Kirsty J. McLean, David R. Nelson, Katherine A. Hollywood, Colin Levy, D. Leys, Andrew W. Munro
Software Mentions: 1
Published: almost 8 years ago

10.1016/j.jlr.2021.100054

Molecular basis for the interaction of cellular retinol binding protein 2 (CRBP2) with nonretinoid ligands
Cited by: 6
Author(s): J.A. Silvaroli, Jacqueline Plau, Charlie H. Adams, Surajit Banerjee, Made Airanthi K. Widjaja‐Adhi, William S. Blaner, Marcin Golczak
Software Mentions: 1
Published: over 5 years ago

10.1021/acs.jmedchem.0c00373

Shedding X-ray Light on the Role of Magnesium in the Activity of Mycobacterium tuberculosis Salicylate Synthase (MbtI) for Drug Design
Cited by: 18
Author(s): Matteo Mori, Giovanni Stelitano, Arianna Gelain, Elena Pini, Laurent R. Chiarelli, Josè Camilla Sammartino, Giulio Poli, Tiziano Tuccinardi, Giangiacomo Beretta, Alessio Porta, M. Bellinzoni, Stefania Villa, Fiorella Meneghetti
Software Mentions: 1
Published: about 6 years ago

10.1016/j.jmb.2010.11.039

Structural Basis for Langerin Recognition of Diverse Pathogen and Mammalian Glycans through a Single Binding Site
Cited by: 101
Author(s): H. Feinberg, Maureen E. Taylor, Nahid Razi, Ryan McBride, Yuriy A. Knirel, Sarah A. Graham, Kurt Drickamer, William I. Weis
Software Mentions: 1
Published: over 15 years ago

10.1016/j.jmb.2011.01.029

Structure of Rhomboid Protease in a Lipid Environment
Cited by: 81
Author(s): Kutti R. Vinothkumar
Software Mentions: 1
Published: over 15 years ago

10.1016/j.jmb.2017.08.010

Structures of Leishmania Fructose-1,6-Bisphosphatase Reveal Species-Specific Differences in the Mechanism of Allosteric Inhibition
Cited by: 9
Author(s): Meng Yuan, Montserrat G. Vásquez-Valdivieso, I.W. McNae, Paul A.M. Michels, Linda A. Fothergill‐Gilmore, Malcolm D. Walkinshaw
Software Mentions: 1
Published: almost 9 years ago

10.1016/j.jmb.2007.09.055

Predicting Protein Function from Structure—The Roles of Short-chain Dehydrogenase/Reductase Enzymes in Bordetella O-antigen Biosynthesis
Cited by: 19
Author(s): Jerry D. King, Nicholas J. Harmer, Andrew Preston, Colin M. Palmer, Martin Rejzek, Robert A. Field, Tom L. Blundell, Duncan J. Maskell
Software Mentions: 1
Published: almost 19 years ago

10.1016/j.jmb.2017.08.007

Studies on the Interaction of the Histone Demethylase KDM5B with Tricarboxylic Acid Cycle Intermediates
Cited by: 26
Author(s): Hanna Tarhonskaya, Radosław P. Nowak, C. Johansson, A. Szykowska, Anthony Tumber, Rebecca L. Hancock, Pauline A. Lang, Emily Flashman, U. Oppermann, Christopher J. Schofield, Akane Kawamura
Software Mentions: 1
Published: about 9 years ago

10.1016/j.jmb.2008.09.085

Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter
Cited by: 52
Author(s): Guoyu Meng, Joseph W. St. Geme, Gabriel Waksman
Software Mentions: 1
Published: almost 18 years ago

10.1016/j.jmb.2017.11.016

The Y. bercovieri Anbu crystal structure sheds light on the evolution of highly (pseudo)symmetric multimers
Cited by: 4
Author(s): Anna Piasecka, H. Czapinska, Marie‐Theres Vielberg, Roman H. Szczepanowski, R. Kiefersauer, Simon H. Reed, M. Groll, Matthias Bochtler
Software Mentions: 1
Published: over 8 years ago

10.1016/j.jmb.2011.10.036

Structure of the Glycosyltransferase EryCIII in Complex with its Activating P450 Homologue EryCII
Cited by: 30
Author(s): Martin C. Moncrieffe, M. J. Fernàndez, Dieter Spiteller, Hideki Matsumura, Ben F. Luisi, Peter F. Leadlay
Software Mentions: 1
Published: over 14 years ago

10.1016/j.jmb.2010.02.026

Structural and Biochemical Bases for the Redox Sensitivity of Mycobacterium tuberculosis RslA
Cited by: 42
Author(s): Krishan Gopal Thakur, T. Praveena, B. Gopal
Software Mentions: 1
Published: over 16 years ago

10.1016/j.jmb.2015.12.018

Pi Release Limits the Intrinsic and RNA-Stimulated ATPase Cycles of DEAD-Box Protein 5 (Dbp5)
Cited by: 14
Author(s): Emily V. Wong, Wenxiang Cao, Judit Vörös, Monique Merchant, Yorgo Modis, David D. Hackney, Ben Montpetit, Enrique M. De La Cruz
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.55966

A dynamic charge-charge interaction modulates PP2A:B56 substrate recruitment
Cited by: 31
Author(s): Xinru Wang, Dimitriya H Garvanska, Isha Nasa, Yumi Ueki, Gang Zhang, Arminja N. Kettenbach, Wolfgang Peti, Jakob Nilsson, Rebecca Page
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.21465

Chlamydia trachomatis-containing vacuole serves as deubiquitination platform to stabilize Mcl-1 and to interfere with host defense
Cited by: 55
Author(s): Annette Fischer, Kelly S. Harrison, Y. Ramirez, Daniela Auer, Suvagata Roy Chowdhury, Bhupesh K. Prusty, Florian Sauer, Zoe Dimond, Caroline Kisker, P. Scott Hefty, Thomas Rudel
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.61496

Structural basis of ClpXP recognition and unfolding of ssrA-tagged substrates
Cited by: 34
Author(s): Fu‐Shan Xue, Tristan A Bell, Sarah R. Barkow, T.A. Baker, Robert T. Sauer
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.53530

New approach for membrane protein reconstitution into peptidiscs and basis for their adaptability to different proteins
Cited by: 44
Author(s): Gabriella Angiulli, Harveer Singh Dhupar, Hiroshi Suzuki, Irvinder Singh Wason, Franck Duong, Thomas Walz
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.02391

Re-examining how complexin inhibits neurotransmitter release
Cited by: 65
Author(s): Thorsten Trimbuch, Junjie Xu, David K. Flaherty, Diana R. Tomchick, Josep Rizo, Christian Rosenmund
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.61056

Antibody escape by polyomavirus capsid mutation facilitates neurovirulence
Cited by: 8
Author(s): Matthew D Lauver, Daniel J. Goetschius, Colleen S. Netherby, Katelyn N Ayers, Ge Jin, Daniel G Haas, Elizabeth Frost, Sung Hyun Cho, Carol M. Bator, Stephanie M. Bywaters, Neil D. Christensen, Susan Hafenstein, Aron E. Lukacher
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.04187

Crystal structure of PfRh5, an essential P. falciparum ligand for invasion of human erythrocytes
Cited by: 52
Author(s): Lin Chen, Yibin Xu, Julie Healer, Jay Daniel Thompson, Brian J. Smith, Michael C. Lawrence, Alan F. Cowman
Software Mentions: 1
Published: almost 12 years ago

10.7554/eLife.36758

Structures reveal opening of the store-operated calcium channel Orai
Cited by: 76
Author(s): Xiaowei Hou, Shana R. Burstein, Stephen B. Long
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.24149

Cryo-EM structure of the ATP-sensitive potassium channel illuminates mechanisms of assembly and gating
Cited by: 155
Author(s): Gregory M. Martin, Craig Yoshioka, Emily A. Rex, Jonathan F. Fay, Qing Xie, Matthew R. Whorton, James Z. Chen, Show Ling Shyng
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.17755

A near atomic structure of the active human apoptosome
Cited by: 62
Author(s): Tianfan Cheng, Chuan Hong, Ildikó V. Akey, Shujun Yuan, Christopher W. Akey
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.43959

Structure and mechanism of a Hypr GGDEF enzyme that activates cGAMP signaling to control extracellular metal respiration
Cited by: 25
Author(s): Zachary F. Hallberg, Chi Ho Chan, Todd A. Wright, Philip J. Kranzusch, Kevin W. Doxzen, James J Park, Daniel R. Bond, Ming C. Hammond
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.21137

Elucidation of a four-site allosteric network in fibroblast growth factor receptor tyrosine kinases
Cited by: 35
Author(s): Huaibin Chen, William M. Marsiglia, Min Kyu Cho, Zhifeng Huang, Jingjing Deng, Steven P. Blais, Weiming Gai, Shibani Bhattacharya, Thomas A. Neubert, Nathaniel J. Traaseth, Moosa Mohammadi
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.43204

The cryo-EM structure of a 12-subunit variant of RNA polymerase I reveals dissociation of the A49-A34.5 heterodimer and rearrangement of subunit A12.2
Cited by: 36
Author(s): Lucas Tafur, Yashar Sadian, Jonas Hanske, René Wetzel, Félix Weis, Christoph W. Müller
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.12411

The Sec7 N-terminal regulatory domains facilitate membrane-proximal activation of the Arf1 GTPase
Cited by: 14
Author(s): Brian C. Richardson, Steve Halaby, Margaret A. Gustafson, J. Christopher Fromme
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.22520

Structure and function of the mycobacterial transcription initiation complex with the essential regulator RbpA
Cited by: 101
Author(s): Elizabeth A. Hubin, Allison Fay, Catherine K. Xu, James Bean, Ruth M. Saecker, Michael S. Glickman, Seth A. Darst, Elizabeth A. Campbell
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.23905

Elucidation of the anti-autophagy mechanism of the Legionella effector RavZ using semisynthetic LC3 proteins
Cited by: 64
Author(s): Aimin Yang, Supansa Pantoom, Yao‐Wen Wu
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.35898

Structural insights into the architecture and membrane interactions of the conserved COMMD proteins
Cited by: 28
Author(s): Michael D. Healy, Manuela K. Hospenthal, Ryan J. Hall, Mintu Chandra, Molly Chilton, Vikas A. Tillu, Kai‐En Chen, Dion J. Celligoi, Fiona J. McDonald, Peter J. Cullen, J.S. Lott, Brett M. Collins, Rajesh Ghai
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.19058

Molecular basis of sidekick-mediated cell-cell adhesion and specificity
Cited by: 32
Author(s): K.M. Goodman, Masahito Yamagata, Xiangshu Jin, Seetha Mannepalli, Phinikoula S. Katsamba, Göran Ahlsén, Alina P. Sergeeva, Barry Honig, Joshua R. Sanes, Lawrence Shapiro
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.11859

A G-protein activation cascade from Arl13B to Arl3 and implications for ciliary targeting of lipidated proteins
Cited by: 117
Author(s): Katja Gotthardt, Mandy Lokaj, Carolin Koerner, Nathalie Falk, Andreas Gießl, Alfred Wittinghofer
Software Mentions: 1
Published: almost 11 years ago

Projects: cran: PHENIX

Science Score: 75/100

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Papers Mentioning PHENIX 2,287