cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2018.02146

A Comparative Analysis of Microbial DNA Preparation Methods for Use With Massive and Branching Coral Growth Forms
Cited by: 14
Author(s): Alejandra Hernández‐Agreda, William Leggat, Tracy D. Ainsworth
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2021.629802

Metaproteomics Reveals Similar Vertical Distribution of Microbial Transport Proteins in Particulate Organic Matter Throughout the Water Column in the Northwest Pacific Ocean
Cited by: 1
Author(s): Ling-Fen Kong, Kunlun Yan, Zhang-Xian Xie, Yuexin He, Lin Lin, Hongkai Xu, Siqi Liu, Dazhi Wang
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms9020211

Disentangling Responses of the Subsurface Microbiome to Wetland Status and Implications for Indicating Ecosystem Functions
Cited by: 4
Author(s): Jie Gao, Miao Liu, Sixue Shi, Ying Liu, Yu Duan, Xianguo Lv, Tsing Bohu, Yuehui Li, Yuanman Hu, Na Wang, Qiuying Wang, Guoqiang Zhuang, Xuliang Zhuang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.00312

Dietary Inulin and Trichuris suis Infection Promote Beneficial Bacteria Throughout the Porcine Gut
Cited by: 17
Author(s): Sophie Stolzenbach, Laura J. Myhill, Lee O’Brien Andersen, Łukasz Krych, Helena Mejer, Andrew R. Williams, Peter Nejsum, Christen Rune Stensvold, Dennis Sandris Nielsen, Stig Milan Thamsborg
Software Mentions: 1
Published: over 6 years ago

10.3390/plants10030476

Transcriptional Regulation of Genes Involved in Zinc Uptake, Sequestration and Redistribution Following Foliar Zinc Application to Medicago sativa
Cited by: 15
Author(s): Alessio Cardini, Elisa Pellegrino, Philip J. White, Barbara Mazzolai, Marco Carlo Mascherpa, Laura Ercoli
Software Mentions: 1
Published: over 5 years ago

10.3390/plants8090311

Effect of Long-Term Fungicide Applications on Virulence and Diversity of Colletotrichum spp. Associated to Olive Anthracnose
Cited by: 11
Author(s): Patrick Materatski, Carla Varanda, Teresa Carvalho, André Luís Dias, Maria Doroteia Campos, Luís Gomes, Tânia Nobre, Fernando Trindade Rei, Maria do Rosário Félix
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2020.00693

Recto-Anal Junction (RAJ) and Fecal Microbiomes of Cattle Experimentally Challenged With Escherichia coli O157:H7
Cited by: 6
Author(s): Raies A. Mir, Robert G. Schaut, Torey Looft, Heather K. Allen, Vijay Kumar Sharma, Indira T. Kudva
Software Mentions: 1
Published: over 6 years ago

10.3389/fnana.2017.00126

Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla
Cited by: 19
Author(s): Dario Carvalho‐Paulo, Nara Gyzely de Morais Magalhães, Diego de Almeida Miranda, Daniel Guerreiro Diniz, Ediely Pereira Henrique, Isis Ananda Matos Moraes, Patrick Douglas Corrêa Pereira, Mauro André Damasceno de Melo, Camila Mendes de Lima, Marcus Augusto de Oliveira, Cristovam Guerreiro-Diniz, David F. Sherry, Cristovam Wanderley Picanço Diniz
Software Mentions: 1
Published: over 8 years ago

10.3389/fneur.2020.01041

Changes in Gastrointestinal Microbiome Composition in PD: A Pivotal Role of Covariates
Cited by: 21
Author(s): Alexandra Cosma-Grigorov, H Meixner, Anne Mrochen, Stefan Wirtz, Jürgen Winkler, Franz Marxreiter
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.01083

The Variation of Nasal Microbiota Caused by Low Levels of Gaseous Ammonia Exposure in Growing Pigs
Cited by: 17
Author(s): Tongxin Wang, Qiongyu He, Weilei Yao, Yafei Shao, Li Ji, Feiruo Huang
Software Mentions: 1
Published: over 7 years ago

10.3389/fneur.2021.574529

Effect of Levodopa Initiation on the Gut Microbiota in Parkinson's Disease
Cited by: 11
Author(s): Natalia Palacios, Anas Hannoun, Julie Flahive, Doyle V. Ward, Kelsey Goostrey, Anindita Deb, Kara M. Smith
Software Mentions: 1
Published: over 5 years ago

10.3390/plants9121797

Salinity-Induced Changes of Photosynthetic Performance, Lawsone, VOCs, and Antioxidant Metabolism in Lawsonia inermis L.
Cited by: 3
Author(s): Basma Najar, Laura Pistelli, Ilaria Marchioni, Luisa Pistelli, Beatrice Muscatello, Marinella De Leo, Andrea Scartazza
Software Mentions: 1
Published: over 5 years ago

10.1186/s13007-020-00700-7

A method for experimental warming of developing tree seeds with a common garden demonstration of seedling responses
Cited by: 10
Author(s): Ehren Moler, Gerald Page, Lluvia Flores‐Rentería, Cory Garms, Julia B. Hull, Hillary F. Cooper, Jared Swenson, Sean Perks, Kristen M. Waring, Amy V. Whipple
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.46205

Cretaceous dinosaur bone contains recent organic material and provides an environment conducive to microbial communities
Cited by: 32
Author(s): Evan T. Saitta, Renxing Liang, Maggie C. Y. Lau, Caleb M. Brown, Nicholas R. Longrich, Thomas G. Kaye, Ben J. Novak, Steven L. Salzberg, Mark A. Norell, Geoffrey D. Abbott, Marc R. Dickinson, Jakob Vinther, Ian D. Bull, Richard A. Brooker, Peter Martin, Paul Donohoe, Timothy Knowles, Kirsty Penkman, Tullis C. Onstott
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2019.01886

Legitimate and Reliable Determination of the Age-Related Intestinal Microbiome in Young Piglets; Rectal Swabs and Fecal Samples Provide Comparable Insights
Cited by: 15
Author(s): R. Choudhury, Anouschka Middelkoop, J.E. Bolhuis, Michiel Kleerebezem
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2018.01848

Isolation, Diversity, and Growth-Promoting Activities of Endophytic Bacteria From Tea Cultivars of Zijuan and Yunkang-10
Cited by: 56
Author(s): Xiaomei Yan, Zhi Wang, Mei Yu, Liqun Wang, Xu Wang, Qingshan Xu, Su Peng, Yu Zhou, Chaoling Wei
Software Mentions: 1
Published: about 8 years ago

10.3389/fnins.2021.690919

Central Administration of Hydrogen Sulfide Donor NaHS Reduces Iba1-Positive Cells in the PVN and Attenuates Rodent Angiotensin II Hypertension
Cited by: 13
Author(s): Başak Dönertaş Ayaz, Aline Cristina Oliveira, Wendi Malphurs, Ty Redler, Arnaldo de Albuquerque Araújo, Ravindra Sharma, Başar Sırmagül, Jasenka Zubcevic
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00425-021-03637-w

Factors contributing to ice nucleation and sequential freezing of leaves in wheat
Cited by: 4
Author(s): David P. Livingston, Annick Bertrand, Michael Wisniewski, Ripley H. Tisdale, Tan D. Tuong, L. V. Gusta, Timothy S. Artlip
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.730477

Assessing the Influence of Environmental Sources on the Gut Mycobiome of Tibetan Macaques
Cited by: 3
Author(s): Binghua Sun, Yingna Xia, Samuel Davison, Andrés Gómez, Paul A. Garber, Katherine R. Amato, Xiaojuan Xu, Dong Xia, Xi Wang, Jin Hua Li
Software Mentions: 1
Published: about 5 years ago

10.3389/fnut.2021.680870

Altered Serum Immunological and Biochemical Parameters and Microbiota Composition in Patients With AN During Realimentation
Cited by: 9
Author(s): Radka Roubalová, Petra Procházková, Jiří Dvořák, Martin Hill, Hana Papežová, Jakub Kreisinger, Josef Bulant, Alena Lambertová, Petra Holanová, Martin Bilej, Helena Tlaskalová‐Hogenová
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.02851

Effect of Different Substrates on Soil Microbial Community Structure and the Mechanisms of Reductive Soil Disinfestation
Cited by: 22
Author(s): Xian-Zheng Tan, Hongkai Liao, Liangzuo Shu, Huaiying Yao
Software Mentions: 1
Published: over 6 years ago

10.3389/fvets.2021.623899

Bacteriophage as an Alternative to Antibiotics Promotes Growth Performance by Regulating Intestinal Inflammation, Intestinal Barrier Function and Gut Microbiota in Weaned Piglets
Cited by: 28
Author(s): Yongdi Zeng, Zi-Rui Wang, Tiande Zou, Jun Chen, Guanhong Li, Liuzhen Zheng, Shuo Li, Jinming You
Software Mentions: 1
Published: over 5 years ago

10.3389/fvets.2020.575685

Supplementing Synbiotic in Sows' Diets Modifies Beneficially Blood Parameters and Colonic Microbiota Composition and Metabolic Activity in Suckling Piglets
Cited by: 10
Author(s): Cui Ma, Qiankun Gao, Wanghong Zhang, Qian Zhu, Wu Tang, François Blachier, Hao Ding, Xiangfeng Kong
Software Mentions: 1
Published: almost 6 years ago

10.3389/fvets.2019.00095

Insight Into Dynamics of Gut Microbial Community of Broilers Fed With Fructooligosaccharides Supplemented Low Calcium and Phosphorus Diets
Cited by: 14
Author(s): Sanjay Kumar, Yue Shang, Woo Kyun Kim
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.591358

Soil Bacterial and Archaeal Communities and Their Potential to Perform N-Cycling Processes in Soils of Boreal Forests Growing on Well-Drained Peat
Cited by: 13
Author(s): Marika Truu, Hiie Nõlvak, Ivika Ostonen, Kristjan Oopkaup, Martin Maddison, Teele Ligi, Mikk Espenberg, Veiko Uri, Ülo Mander, Jaak Truu
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.01381

Microbiota Analysis for the Optimization of Campylobacter Isolation From Chicken Carcasses Using Selective Media
Cited by: 12
Author(s): Jinshil Kim, Hakdong Shin, Hyeeun Park, Hayan Jung, Junhyung Kim, Seongbeom Cho, Sangryeol Ryu, Byeonghwa Jeon
Software Mentions: 1
Published: about 7 years ago

10.3389/fvets.2021.642809

Effects of Aleurone Supplementation on Glucose-Insulin Metabolism and Gut Microbiome in Untrained Healthy Horses
Cited by: 2
Author(s): Berit Boshuizen, Carmen Vidal Moreno de Vega, Lorie De Maré, Constance De meeûs, J. E. de Oliveira, Guilherme Hosotani, Yannick Gansemans, Dieter Deforce, Filip Van Nieuwerburgh, Cathérine Delesalle
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2014.00616

Microbial interactions and the ecology and evolution of Hawaiian Drosophilidae
Cited by: 3
Author(s): Timothy K. O’Connor, Parris T. Humphrey, Richard T. Lapoint, Noah K. Whiteman, Patrick M. O’Grady
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2017.01702

Composted Cattle Manure Increases Microbial Activity and Soil Fertility More Than Composted Swine Manure in a Submerged Rice Paddy
Cited by: 126
Author(s): Suvendu Das, Seung Tak Jeong, Suvendu Das
Software Mentions: 1
Published: about 9 years ago

10.3389/fvets.2017.00192

Impact of Dietary Galacto-Oligosaccharide (GOS) on Chicken’s Gut Microbiota, Mucosal Gene Expression, and Salmonella Colonization
Cited by: 16
Author(s): Rebecca Ayme Hughes, Riawana A. Ali, Mary Mendoza, Hosni M. Hassan, Matthew D. Koci
Software Mentions: 1
Published: almost 9 years ago

10.1128/mSystems.00140-17

Development of the Human Mycobiome over the First Month of Life and across Body Sites
Cited by: 125
Author(s): Tonya Ward, Maria Gloria Domínguez-Bello, Tim Heisel, Gabriel A. Al‐Ghalith, Dan Knights, Cheryl A. Gale
Software Mentions: 1
Published: about 8 years ago

10.3389/fvets.2021.650150

Feeding Pre-weaned Calves With Waste Milk Containing Antibiotic Residues Is Related to a Higher Incidence of Diarrhea and Alterations in the Fecal Microbiota
Cited by: 18
Author(s): Martina Penati, Giulia Sala, Filippo Biscarini, Antonio Boccardo, V. Bronzo, Bianca Castiglioni, Paola Cremonesi, P. Moroni, D. Pravettoni, Maria Filippa Addis
Software Mentions: 1
Published: about 5 years ago

10.3389/fvets.2020.00569

A Mixed Phytogenic Modulates the Rumen Bacteria Composition and Milk Fatty Acid Profile of Water Buffaloes
Cited by: 8
Author(s): Faiz‐ul Hassan, H. M. Ebeid, Zhengyi Tang, Mengwei Li, Lijuan Peng, Kaiping Peng, Xin Liang, Chengjian Yang
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2021.705020

Gut Microbiota Diversity and C-Reactive Protein Are Predictors of Disease Severity in COVID-19 Patients
Cited by: 48
Author(s): André Moreira-Rosário, Cláudia Marques, Hélder Pinheiro, João R. Araújo, Pedro Ribeiro, Rita Rocha, Inês Barreiros Mota, Diogo Pestana, Rogers Ribeiro, Ana Margarida Pereira, Maria José Sousa, José B. Pereira-Leal, José de Sousa, Juliana Morais, Diana Teixeira, Júlio César Rocha, Marta P. Silvestre, Nuno Príncipe, Nuno Gatta, J. A. Amado, Lurdes Santos, Fernando Maltêz, Ana Boquinhas, Germano de Sousa, Nuno Germano, Gonçalo Sarmento, Cristina Granja, Pedro Póvoa, Ana Faria, Conceição Calhau
Software Mentions: 1
Published: about 5 years ago

10.1128/mSystems.00021-18

Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information
Cited by: 329
Author(s): Stefan Janssen, Daniel McDonald, Antonio González, José A. Navas-Molina, Lingjing Jiang, Zhenjiang Zech Xu, Kevin Winker, Deborah M. Kado, Eric S. Orwoll, Mark J. Manary, Siavash Mirarab, Rob Knight
Software Mentions: 1
Published: about 8 years ago

10.3389/fvets.2021.706592

Presence of Adult Companion Goats Favors the Rumen Microbial and Functional Development in Artificially Reared Kids
Cited by: 7
Author(s): Juan Manuel Palma-Hidalgo, D. R. Yáñez-Ruíz, Elisabeth Jiménez, A. I. Martin-García, Alejandro Belanche
Software Mentions: 1
Published: about 5 years ago

10.3389/fvets.2019.00497

Characterizing Woody Breast Myopathy in a Meat Broiler Line by Heat Production, Microbiota, and Plasma Metabolites
Cited by: 20
Author(s): Pramir Maharjan, Katie Hilton, Jordan Weil, N. Suesuttajit, A. Beitia, Casey M. Owens, C. N. Coon
Software Mentions: 1
Published: over 6 years ago

10.3389/fvets.2020.00558

Evaluation of Healthy Canine Conjunctival, Periocular Haired Skin, and Nasal Microbiota Compared to Conjunctival Culture
Cited by: 12
Author(s): Kayla C. Banks, Elizabeth A. Giuliano, Susheel Bhanu Busi, Carol R. Reinero, Aaron C. Ericsson
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2016.01749

Microbial Communities of Conducting and Respiratory Zones of Lung-Transplanted Patients
Cited by: 8
Author(s): Marie Beaume, Vladimir Lazarević, Thilo Köhler, Nadia Gaïa, Oriol Manuel, John-David Aubert, Loic Bærlocher, Laurent Farinelli, Paola Gasche, Jacques Schrenzel, Christian van Delden, Rita Achermann, Patrizia Amico, Philippe Baumann, Guido Beldi, Christian Benden, Christoph Berger, Isabelle Binet, Pierre‐Yves Bochud, Elsa Boely, Heiner C. Bucher, Léo H. Bühler, Thierry Carell, Emmanuelle Catana, Yves Chalandon, Sabina De Geest, Olivier de Rougemont, Michael Dickenmann, Michel Duchosal, Thomas Fehr, Sylvie Ferrari‐Lacraz, Christian Garzoni, Paola Gasche Soccal, Emiliano Giostra, Déla Golshayan, Daniel W. Good, Karine Hadaya, Jörg Halter, Dominik Heim, Christoph Hess, Sven Hillinger, Hans H. Hirsch, Cédric Hirzel, Günther F.L. Hofbauer, Uyen Huynh‐Do, Franz F. Immer, Richard Klaghofer, Michael Koller, Bettina Laesser, Roger Lehmann, Christian Lovis, Hanspeter Marti, Pierre Yves Martin, Luca Martinolli, Pascal Meylan, Paul Mohaçsi, Isabelle Morard, Philippe Morel, Ulrike Mueller, Nicolas J. Mueller, Helen Mueller-McKenna, A Müller, Thomas Müller, Beat Müllhaupt, David Nadal, Manuel Pascual, Jakob Passweg, Chantal Piot Ziegler, Juliane Rick, Eddy Roosnek, Anne Rosselet, Silvia Rothlin, Frank Ruschitzka, Urs Schanz, Stefan Schaub, Christian Seiler, Susanne Stampf, Jürg Steiger, Guido Stirnimann, Guido Toso, Dimitri Tsinalis, Jean-Pierre Venetz, Jean Villard, Madeleine Wick, Markus J. Wilhelm, Patrick Yerly
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2016.00956

Can the Bacterial Community of a High Arctic Glacier Surface Escape Viral Control?
Cited by: 23
Author(s): Sara Rassner, Alexandre M. Anesio, Susan Elizabeth Girdwood, Katherina Hell, Jarishma K. Gokul, David E. Whitworth, Arwyn Edwards
Software Mentions: 1
Published: about 10 years ago

10.3389/fmicb.2018.03334

Bacterial Communities in the Alpaca Gastrointestinal Tract Vary With Diet and Body Site
Cited by: 3
Author(s): Courtney Carroll, Kyle D. Olsen, Nathan J. Ricks, Kimberly A. Dill‐McFarland, Garret Suen, Todd Robinson, John M. Chaston
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2021.542064

Patterns of Sediment Fungal Community Dependent on Farming Practices in Aquaculture Ponds
Cited by: 8
Author(s): Zhimin Zhang, Qinghui Deng, Xiuyun Cao, Yiyong Zhou, Changchun Song
Software Mentions: 1
Published: over 5 years ago

10.1007/s00425-016-2559-6

Maize proteomic responses to separate or overlapping soil drought and two-spotted spider mite stresses
Cited by: 22
Author(s): Anna Dworak, Małgorzata Nykiel, Beata Walczak, A. Miazek, Dagmara Szworst-Łupina, Barbara Zagdańska, Małgorzata Kiełkiewicz
Software Mentions: 1
Published: about 10 years ago

10.3390/microorganisms8050696

Role of Leaf Litter in Above-Ground Wood Decay
Cited by: 4
Author(s): Grant T. Kirker, Amy B. Bishell, Jed Cappellazzi, Jonathan M. Palmer, Nathan J. Bechle, Patricia K. Lebow, Stan Lebow
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2019.01459

The Capacity of the Fecal Microbiota From Malawian Infants to Ferment Resistant Starch
Cited by: 9
Author(s): Yanan Wang, Elissa Mortimer, Kondwani Katundu, Noel Kalanga, Lex E. X. Leong, Geetha Gopalsamy, Claus T. Christophersen, Alyson Richard, Aravind Shivasami, Guy C. J. Abell, Graeme P. Young, Geraint B. Rogers
Software Mentions: 1
Published: about 7 years ago

10.3389/fmed.2021.655474

Gut Microbiota and Related Electronic Multisensorial System Changes in Subjects With Symptomatic Uncomplicated Diverticular Disease Undergoing Rifaximin Therapy
Cited by: 6
Author(s): Antonio De Vincentis, Marco Santonico, Federica Del Chierico, Annamaria Altomare, Benedetta Marigliano, Alice Laudisio, Sofia Reddel, Simone Grasso, Alessandro Zompanti, Giorgio Pennazza, Lorenza Putignani, Michele Pier Luca Guarino, Michele Cicala, Raffaele Antonelli Incalzi
Software Mentions: 1
Published: about 5 years ago

10.14814/phy2.14867

Depletion of the gut microbiota differentially affects the impact of whey protein on high‐fat diet‐induced obesity and intestinal permeability
Cited by: 11
Author(s): Serena Boscaini, Raúl Cabrera‐Rubio, Anna V. Golubeva, Oleksandr Nychyk, Christine Fülling, John R. Speakman, Paul D. Cotter, John F. Cryan, Kanishka N. Nilaweera
Software Mentions: 1
Published: over 5 years ago

10.14814/phy2.13935

Effects of short‐term endurance exercise on gut microbiota in elderly men
Cited by: 72
Author(s): Hirokazu Taniguchi, Kumpei Tanisawa, Xiaomin Sun, Takafumi Kubo, Y. Hoshino, Masahito Hosokawa, Haruko Takeyama, Mitsuru Higuchi
Software Mentions: 1
Published: almost 8 years ago

10.1186/1742-9994-9-38

Do host species evolve a specific response to slave-making ants?
Cited by: 7
Author(s): Olivier Delattre, Rumsaïs Blatrix, Nicolas Châline, Stéphane Chameron, Anne Fédou, Chloé Leroy, Pierre Jaisson
Software Mentions: 1
Published: over 14 years ago

10.1186/s12983-016-0134-4

Feeding cessation alters host morphology and bacterial communities in the ascidian Pseudodistoma crucigaster
Cited by: 10
Author(s): Susanna López‐Legentil, Xavier Turon, Patrick M. Erwin
Software Mentions: 1
Published: over 10 years ago

10.3389/fmed.2021.637246

Compare the Effect of Inhaled Corticosteroids and Systemic Corticosteroids on Sputum Microbiome of AECOPD
Cited by: 4
Author(s): Nan Ma, Yu-Jing Qi, Xiaona Liang, Jing Bai, Jingmin Deng, Meihua Li, He Zhou
Software Mentions: 1
Published: over 5 years ago

10.3390/pharmaceutics12060515

Cationic Dendrimer G2-S16 Inhibits Herpes Simplex Type 2 Infection and Protects Mice Vaginal Microbiome
Cited by: 9
Author(s): Carlos Enrique Guerrero-Beltrán, Inmaculada García-Heredia, Rafael Ceña‐Diez, Ignacio Rodríguez‐Izquierdo, Ma Jesús Serramía, Francisco Martínez-Hernández, Mónica Lluesma-Gomez, Manuel Martínez‐García, María Ángeles Muñoz‐Fernández
Software Mentions: 1
Published: over 6 years ago

10.3390/ph14040299

Fermented Maillard Reaction Products by Lactobacillus gasseri 4M13 Alters the Intestinal Microbiota and Improves Dysfunction in Type 2 Diabetic Mice with Colitis
Cited by: 2
Author(s): Young Jin Jeong, Ho-Young Park, Han Kyul Nam, Kwang Won Lee
Software Mentions: 1
Published: over 5 years ago

10.1186/s12983-016-0170-0

Stable isotope signatures reflect dietary diversity in European forest moths
Cited by: 9
Author(s): Marc-Oliver Adams, Carlo L. Seifert, Lisamarie Lehner, Christine Truxa, Wolfgang Wanek, Konrad Fiedler
Software Mentions: 1
Published: about 10 years ago

10.3389/fmars.2020.566663

Energy Sources of the Depth-Generalist Mixotrophic Coral Stylophora pistillata
Cited by: 27
Author(s): Stephane Martinez, Yehoshua Kolodny, Eli Shemesh, Federica Scucchia, Reinat Nevo, Smadar Levin-Zaidman, Yossi Paltiel, Nir Keren, Dan Tchernov, Tali Mass
Software Mentions: 1
Published: almost 6 years ago

10.3389/fnint.2021.719076

A Multivariate Assessment of Age-Related Cognitive Impairment in Octodon degus
Cited by: 7
Author(s): Daniela Rivera, Carolina B. Lindsay, Carolina A. Oliva, Francisco Bozinovic, Nibaldo C. Inestrosa
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2021.700570

Adalimumab Therapy Restores the Gut Microbiota in Patients With Ankylosing Spondylitis
Cited by: 14
Author(s): Zena Chen, Xuqi Zheng, Xinyu Wu, Jialing Wu, Xiaomin Li, Qiujing Wei, Xi Zhang, Lin Fang, Ou Jin, Gu J
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2020.01654

Altered Microbiota, Impaired Quality of Life, Malabsorption, Infection, and Inflammation in CVID Patients With Diarrhoea
Cited by: 17
Author(s): Cornelia M. van Schewick, Christina Nöltner, Svenja Abel, Siobhan O. Burns, Sarita Workman, Andrew Symes, David Sánchez-Migallón Guzman, Michele Proietti, Alla Bulashevska, Fernando Moreira, Veronika Soetedjo, David M. Lowe, Bodo Grimbacher
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2020.00468

Fungal Dysbiosis and Intestinal Inflammation in Children With Beta-Cell Autoimmunity
Cited by: 31
Author(s): Jarno Honkanen, Arja Vuorela, Daniel Muthas, L. Orivuori, Kristiina Luopajärvi, Mysore V. Tejesvi, Anton Lavrinienko, Anna Maria Pirttilä, Christopher L. Fogarty, Taina Härkönen, Jorma Ilonen, Terhi Ruohtula, Mikael Knip, Janne J. Koskimäki, Outi Vaarala
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.1398

Persistent microbial dysbiosis in preterm premature rupture of membranes from onset until delivery
Cited by: 48
Author(s): Elizabeth A. Baldwin, Marina Walther-Antonio, Allison MacLean, Daryl M. Gohl, Kenneth B. Beckman, Jun Chen, Bryan A. White, Douglas J. Creedon, Nicholas Chia
Software Mentions: 1
Published: almost 11 years ago

10.1007/s10120-020-01141-w

Long-term persistence of gastric dysbiosis after eradication of Helicobacter pylori in patients who underwent endoscopic submucosal dissection for early gastric cancer
Cited by: 14
Author(s): Toshio Watanabe, Yuji Nadatani, Wataru Suda, Akira Higashimori, Koji Otani, Shusei Fukunaga, Shuhei Hosomi, Fumio Tanaka, Yasuaki Nagami, Koichi Taira, Tetsuya Tanigawa, Geicho Nakatsu, Masahira Hattori, Yasuhiro Fujiwara
Software Mentions: 1
Published: almost 6 years ago

10.1155/2018/5284754

Colonic Mucosal Microbiota in Colorectal Cancer: A Single-Center Metagenomic Study in Saudi Arabia
Cited by: 24
Author(s): Ameen Al-Omair, Ibrahim Masoodi, Essam J. Alyamani, Abed Al-Lehibi, Adel Qutub, Khalid Alsayari, Musaad A. Altammami, Ali S. Alshanqeeti
Software Mentions: 1
Published: over 8 years ago

10.3389/fimmu.2019.00666

Oral Administration of Compound Probiotics Improved Canine Feed Intake, Weight Gain, Immunity and Intestinal Microbiota
Cited by: 50
Author(s): Haiyan Xu, Weiqiang Huang, Qiangchuan Hou, Lai‐Yu Kwok, Wuri Laga, Yanjie Wang, Hongbing Ma, Zhihong Sun, Heping Zhang
Software Mentions: 1
Published: over 7 years ago

10.12688/gatesopenres.13039.2

Safe and effective delivery of supplemental iron to healthy older adults: The double-blind, randomized, placebo-controlled trial protocol of the Safe Iron Study
Cited by: 1
Author(s): Erin D. Lewis, Dayong Wu, Joel B. Mason, Athar H. Chishti, John M. Leong, Kathryn Barger, Simin Nikbin Meydani, Gerald F. Combs
Software Mentions: 1
Published: over 5 years ago

10.3390/genes8120364

Delivery Mode and the Transition of Pioneering Gut-Microbiota Structure, Composition and Predicted Metabolic Function
Cited by: 50
Author(s): Noel T. Mueller, Hakdong Shin, Aline Pizoni, Isabel Cristina Ribas Werlang, Úrsula da Silveira Matte, Marcelo Zubarán Goldani, Helena Ayako Sueno Goldani, Maria Gloria Domínguez-Bello
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.7128

Altitudinal gradients in Magellanic sub-Antarctic lagoons: the effect of elevation on freshwater macroinvertebrate diversity and distribution
Cited by: 10
Author(s): Javier Rendoll-Cárcamo, Tamara Contador, Melisa Gañán, Carolina Pérez-Troncoso, Alan Maldonado Márquez, Peter Convey, James H. Kennedy, Ricardo Rozzi
Software Mentions: 1
Published: about 7 years ago

10.3390/microorganisms9071464

Culturable and Non-Culturable Blood Microbiota of Healthy Individuals
Cited by: 11
Author(s): Stefan Panaiotov, Yordan Hodzhev, Borislava Tsafarova, Vladimir Tolchkov, Reni Kalfin
Software Mentions: 1
Published: about 5 years ago

10.3390/genes10030248

Food Tracking Perspective: DNA Metabarcoding to Identify Plant Composition in Complex and Processed Food Products
Cited by: 37
Author(s): Antonia Bruno, Anna Sandionigi, Giulia Agostinetto, Lorenzo Bernabovi, Jessica Frigerio, Maurizio Casiraghi, Massimo Labra
Software Mentions: 1
Published: over 7 years ago

10.3390/genes10050325

Metagenomics-Guided Survey, Isolation, and Characterization of Uranium Resistant Microbiota from the Savannah River Site, USA
Cited by: 20
Author(s): Rajneesh Jaswal, Ashish Pathak, Bobby Edwards, Robert P. Lewis, John C. Seaman, Paul Stothard, Kirill Krivushin, Jochen Blom, Oliver Rupp, Ashvini Chauhan
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2020.01703

Microbiome and Metabolome Analyses Reveal the Disruption of Lipid Metabolism in Systemic Lupus Erythematosus
Cited by: 51
Author(s): Jingquan He, Tianlong Chan, Xiaoping Hong, Fengping Zheng, Chaowei Zhu, Yin Li, Weier Dai, Donge Tang, Dongzhou Liu, Yong Dai
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2020.607609

Neonatal Diet Impacts the Large Intestine Luminal Metabolome at Weaning and Post-Weaning in Piglets Fed Formula or Human Milk
Cited by: 5
Author(s): Fernanda Rosa, Katelin S. Matazel, Anne K. Bowlin, Keith D. Williams, Ahmed A. Elolimy, Sean H. Adams, Lars Bode, Laxmi Yeruva
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2021.713485

Glycerol Monolaurate Ameliorated Intestinal Barrier and Immunity in Broilers by Regulating Intestinal Inflammation, Antioxidant Balance, and Intestinal Microbiota
Cited by: 19
Author(s): Linglian Kong, Zhenhua Wang, Chuanpi Xiao, Qidong Zhu, Zhigang Song
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2020.607754

Gut–Liver Immune Response and Gut Microbiota Profiling Reveal the Pathogenic Mechanisms of Vibrio harveyi in Pearl Gentian Grouper (Epinephelus lanceolatus♂ × E. fuscoguttatus♀)
Cited by: 31
Author(s): Yiqin Deng, Yaqiu Zhang, Haoxiang Chen, Li‐Wen Xu, Qian Wang, Feng Jiang
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2020.00200

Murine Gut Microbiome Association With APOE Alleles
Cited by: 34
Author(s): Ishita Parikh, Janice L. Estus, Diana J. Zajac, Manasi Malik, Juan Maldonado Weng, Leon M. Tai, George E. Chlipala, Mary Jo LaDu, Stefan J. Green, Steven Estus
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2021.688886

Preservation of Gastrointestinal Mucosal Barrier Function and Microbiome in Patients With Controlled HIV Infection
Cited by: 6
Author(s): Gerald Mak, John Zaunders, Michelle Bailey, Nabila Seddiki, Geraint B. Rogers, Lex Leong, Tri Giang Phan, Anthony D. Kelleher, Kersten K. Koelsch, Mark Boyd, Mark Danta
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2020.02101

Intestinal Barrier Breakdown and Mucosal Microbiota Disturbance in Neuromyelitis Optical Spectrum Disorders
Cited by: 12
Author(s): Chun-Ping Chu, Sha Tan, Tao Li, Junli Gong, Yanyu Chang, Yuge Wang, Ping Fan, Dan He, Yiwen Ruan, Wei Qiu
Software Mentions: 1
Published: about 6 years ago

10.1128/mSystems.00177-18

Influence of Feeding Type and <i>Nosema ceranae</i> Infection on the Gut Microbiota of <i>Apis cerana</i> Workers
Cited by: 29
Author(s): Shao Kang Huang, Kun T. Ye, Wei Huang, Bi H. Ying, Xin Su, Li Lin, Jiang H. Li, Yan P. Chen, Ji L. Li, Xiulong Bao, Jian Hu
Software Mentions: 1
Published: almost 8 years ago

10.1590/1678-4685-GMB-2017-0255

Leaf-associated bacterial microbiota of coffee and its correlation with manganese and calcium levels on leaves
Cited by: 4
Author(s): Leandro Pio de Sousa, Marcio da da José Silva, Jorge Maurı́cio Costa Mondego
Software Mentions: 1
Published: over 8 years ago

10.3389/fimmu.2021.669672

Trans Fatty Acid Intake Induces Intestinal Inflammation and Impaired Glucose Tolerance
Cited by: 18
Author(s): Tomio Okamura, Yoshitaka Hashimoto, Susumu Majima, Takafumi Senmaru, Emi Ushigome, Naoko Nakanishi, Mai Asano, Masahiro Yamazaki, Hiroshi Takakuwa, Michiaki Fukui
Software Mentions: 1
Published: over 5 years ago

10.1186/s13059-014-0487-y

Improved characterization of medically relevant fungi in the human respiratory tract using next-generation sequencing
Cited by: 107
Author(s): Kyle Bittinger, Emily S. Charlson, Dorothy E. Loy, David J. Shirley, Andrew R. Haas, Alice Laughlin, Yanjie Yi, Gary D. Wu, James D. Lewis, Ian Frank, Edward Cantu, Joshua M. Diamond, Jason D. Christie, Ronald G. Collman, Frederic D. Bushman
Software Mentions: 1
Published: almost 12 years ago

10.7717/peerj.6844

Captivity causes taxonomic and functional convergence of gut microbial communities in bats
Cited by: 18
Author(s): Yanhong Xiao, Guohong Xiao, Heng Liu, Xiaohui Zhao, Congnan Sun, Xiao Tan, Keping Sun, Sen Liu, Feng Jiang
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2021.755481

Consumption of Butylated Starch Alleviates the Chronic Restraint Stress-Induced Neurobehavioral and Gut Barrier Deficits Through Reshaping the Gut Microbiota
Cited by: 22
Author(s): Peijun Tian, Huiyue Zhu, Xin Qian, Ying Chen, Zheng Wang, Jianxin Zhao, Hao Zhang, Gang Wang
Software Mentions: 1
Published: almost 5 years ago

10.1128/mSystems.00281-18

Pangenomic Approach To Understanding Microbial Adaptations within a Model Built Environment, the International Space Station, Relative to Human Hosts and Soil
Cited by: 29
Author(s): Ryan A. Blaustein, Alexander McFarland, Sarah Ben Maamar, Alberto M. López, Sarah L. Castro-Wallace, Erica M. Hartmann
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2020.599625

Host Defense Effectors Expressed by Hemocytes Shape the Bacterial Microbiota From the Scallop Hemolymph
Cited by: 7
Author(s): Roxana González, Ana Teresa Gonçalves, Rodrigo Rojas, Katherina Brokordt, Rafael Diego Rosa, Paulina Schmitt
Software Mentions: 1
Published: almost 6 years ago

10.1128/mSystems.00208-18

Rare Taxa Exhibit Disproportionate Cell-Level Metabolic Activity in Enriched Anaerobic Digestion Microbial Communities
Cited by: 19
Author(s): Yangyang Jia, Marcus H. Y. Leung, Xinzhao Tong, David E. Wilkins, Patrick K. H. Lee
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2021.621803

Effects of Vaccination Against Coccidiosis on Gut Microbiota and Immunity in Broiler Fed Bacitracin and Berry Pomace
Cited by: 7
Author(s): Quail Das, Julie Shay, Martin Gauthier, Yin X, Teri-Lyn Hasted, Kelly Ross, Carl Julien, Hassina Yacini, Yan Martel Kennes, Keith Warriner, Massimo F. Marcone, Moussa S. Diarra
Software Mentions: 1
Published: over 5 years ago

10.3389/fendo.2021.630526

The Impact of Gut Microbiome on Metabolic Disorders During Catch-Up Growth in Small-for-Gestational-Age
Cited by: 7
Author(s): Jie An, Junqi Wang, Li Guo, Xiao Ming Yuan, Wenli Lü, Lin Li, Lifen Chen, Xinqiong Wang, Zhiya Dong
Software Mentions: 1
Published: over 5 years ago

10.1186/s13059-019-1879-9

Gut-derived Enterococcus faecium from ulcerative colitis patients promotes colitis in a genetically susceptible mouse host
Cited by: 64
Author(s): Jun Seishima, Noriho Iida, Kazuya Kitamura, Masahiro Yutani, Ziyu Wang, Akihiro Seki, Taro Yamashita, Yoshio Sakai, Masao Honda, Takashi Kagaya, Yukihiro Shirota, Yukako Fujinaga, Eishiro Mizukoshi
Software Mentions: 1
Published: almost 7 years ago

10.3389/fendo.2021.662725

Clinical Manifestations of Polycystic Ovary Syndrome and Associations With the Vaginal Microbiome: A Cross-Sectional Based Exploratory Study
Cited by: 14
Author(s): Hong Xiang, Pengfei Qin, Jiechen Yin, Yong Shi, Xuan Yang, Zhengqi Chen, Xu Zhou, Hong Yu, Danhong Peng, Bei Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2019.00101

Phenylketonuria Diet Promotes Shifts in Firmicutes Populations
Cited by: 29
Author(s): G. Bassanini, Camilla Ceccarani, Francesca Borgo, Marco Severgnini, Valentina Rovelli, Giulia Morace, Elvira Verduci, Elisa Borghi
Software Mentions: 1
Published: over 7 years ago

10.7717/peerj.3080

Are floating algal mats a refuge from hypoxia for estuarine invertebrates?
Cited by: 12
Author(s): Michael R.S. Coffin, Kyle M. Knysh, Emma F. Theriault, Christina C. Pater, Simon C. Courtenay, Michael R. van den Heuvel
Software Mentions: 1
Published: over 9 years ago

10.3389/fcimb.2021.625581

Nasopharyngeal Microbiome Signature in COVID-19 Positive Patients: Can We Definitively Get a Role to Fusobacterium periodonticum?
Cited by: 48
Author(s): Carmela Nardelli, Ivan Gentile, Mario Setaro, Carmela Di Domenico, Biagio Pinchera, Antonio Riccardo Buonomo, Emanuela Zappulo, Riccardo Scotto, Giovanni Luca Scaglione, Giuseppe Castaldo, Ettore Capoluongo
Software Mentions: 1
Published: over 5 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Penalties:

Papers Mentioning PERMANOVA 6,292