cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.1038/s41598-018-37914-8

Mapping the Surface Microbiome and Metabolome of Brown Seaweed Fucus vesiculosus by Amplicon Sequencing, Integrated Metabolomics and Imaging Techniques
Cited by: 39
Author(s): Delphine Parrot, Martina Blümel, Caroline Utermann, Giuseppina Chianese, Stefan Krause, Alexander Kovalev, Stanislav N. Gorb, Deniz Taşdemir
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-38541-7

Short-term response of the soil bacterial community to differing wildfire severity in Pinus tabulaeformis stands
Cited by: 28
Author(s): Weike Li, Shukui Niu, Xiaodong Liu, Jianming Wang
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-39521-7

Soil bacterial diversity is positively associated with air temperature in the maritime Antarctic
Cited by: 32
Author(s): Paul G. Dennis, Kevin K. Newsham, Steven Rushton, Anthony G. OˈDonnell, D. W. Hopkins
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-39163-9

Host plant and population source drive diversity of microbial gut communities in two polyphagous insects
Cited by: 86
Author(s): Arthur C. Jones, Charles J. Mason, Gary W. Felton, Kelli Hoover
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-40315-0

Fiddler crab bioturbation determines consistent changes in bacterial communities across contrasting environmental conditions
Cited by: 49
Author(s): Jenny Marie Booth, Marco Fusi, Ramona Marasco, Tumeka Mbobo, Daniele Daffonchio
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-39711-3

Increasing predation risk with light reduces speed, exploration and visit duration of invasive ship rats (Rattus rattus)
Cited by: 12
Author(s): Bridgette Farnworth, Richard Meitern, John Innes, Joseph R. Waas
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-41149-6

Gut microbiota profile in children affected by atopic dermatitis and evaluation of intestinal persistence of a probiotic mixture
Cited by: 96
Author(s): Sofia Reddel, Federica Del Chierico, Andrea Quagliariello, Simona Giancristoforo, Pamela Vernocchi, Alessandra Russo, Alessandro Fiocchi, Paolo Rossi, Lorenza Putignani, May El Hachem
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-41597-0

Longitudinal development of the airway microbiota in infants with cystic fibrosis
Cited by: 19
Author(s): B. Ahmed, Michael J. Cox, Leah Cuthbertson, Phillip James, Woc Cookson, Jane C. Davies, Miriam F. Moffatt, Andrew Bush
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-42329-0

In situ response of Antarctic under-ice primary producers to experimentally altered pH
Cited by: 13
Author(s): Vonda J. Cummings, Neill Barr, R. G. Budd, Peter Marriott, Karl Safi, Andrew M. Lohrer
Software Mentions: 1
Published: over 7 years ago

10.1038/srep02646

Size matters: implications of the loss of large individuals for ecosystem function
Cited by: 167
Author(s): Alf Norkko, Anna Villnäs, Joanna Norkko, Sebastian Valanko, Conrad A. Pilditch
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-019-43346-9

Microbiota alter metabolism and mediate neurodevelopmental toxicity of 17β-estradiol
Cited by: 20
Author(s): Tara R. Catron, Adam Swank, Leah C. Wehmas, Drake Phelps, Scott P. Keely, Nichole E. Brinkman, James McCord, Randolph R. Singh, Jon R. Sobus, Charles E. Wood, Mark J. Strynar, Emily Wheaton, Tamara Tal
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-42550-x

Context dependency, co-introductions, novel mutualisms, and host shifts shaped the ectomycorrhizal fungal communities of the alien tree Eucalyptus globulus
Cited by: 12
Author(s): Serena Santolamazza‐Carbone, Mónica Durán-Otero, María Calviño‐Cancela
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-43980-3

The role of fungi in heterogeneous sediment microbial networks
Cited by: 31
Author(s): Jenny Marie Booth, Marco Fusi, Ramona Marasco, Grégoire Michoud, Stilianos Fodelianakis, Giuseppe Merlino, Daniele Daffonchio
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-44301-4

Cognitive and Microbiome Impacts of Experimental Ancylostoma ceylanicum Hookworm Infections in Hamsters
Cited by: 8
Author(s): Samuel C. Pan, Doyle V. Ward, Yunqiang Yin, Yan Hu, Mostafa A. Elfawal, Robert E. Clark, Raffi V. Aroian
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-44321-0

Sperm motility of oysters from distinct populations differs in response to ocean acidification and freshening
Cited by: 13
Author(s): Laura J. Falkenberg, Craig A. Styan, Jonathan N. Havenhand
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-44566-9

Annual Thermal Stress Increases a Soft Coral’s Susceptibility to Bleaching
Cited by: 19
Author(s): Marc Slattery, M. Sabrina Pankey, Michael P. Lesser
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-44918-5

Assemblage structure of ichthyoplankton in the NE Atlantic in spring under contrasting hydrographic conditions
Cited by: 8
Author(s): J.M. Rodrı́guez
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-44426-6

Author Correction: Differences in the fecal microbiota of neonates born at home or in the hospital
Cited by: 1
Author(s): Joan Combellick, Hakdong Shin, Dongjae Shin, Yi Cai, Holly Hagan, Corey Lacher, David L. Lin, Kathryn McCauley, Susan V. Lynch, Maria Gloria Domínguez-Bello
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-46388-1

Community analysis of gut microbiota in hornets, the largest eusocial wasps, Vespa mandarinia and V. simillima
Cited by: 35
Author(s): Shota Suenami, Masaru K. Nobu, Ryo Miyazaki
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-46607-9

Some environmental and biological determinants of coral richness, resilience and reef building in Galápagos (Ecuador)
Cited by: 8
Author(s): Bernhard Riegl, Matthew W. Johnston, Peter W. Glynn, Inti Keith, Fernando Rivera, Mariana Vera-Zambrano, Stuart Banks, Joshua S. Feingold, Peter J. Glynn
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-46887-1

The effect of regular dental cast artifacts on the 3D superimposition of serial digital maxillary dental models
Cited by: 22
Author(s): Eva Henninger, Georgios Vasilakos, Demetrios J. Halazonetis, Nikolaos Gkantidis
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-46326-1

Pathogen transmission risk by opportunistic gulls moving across human landscapes
Cited by: 23
Author(s): Joan Navarro, David Grémillet, Isabel Afán, Francisco Verdugo-Miranda, W. Bouten, Manuela G. Forero, Jordi Figuerola
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-48549-8

Calcium carbonate alters the functional response of coastal sediments to eutrophication-induced acidification
Cited by: 3
Author(s): Tarn P. Drylie, Hazel Rosemary Needham, Andrew M. Lohrer, Adam Hartland, Conrad A. Pilditch
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-48414-8

Dynamics and diversity of bacteria associated with the disease vectors Aedes aegypti and Aedes albopictus
Cited by: 33
Author(s): Kelly L. Bennett, Carmelo Gómez Martínez, Yamileth Chin, Kristin Saltonstall, W. Owen McMillan, José Rovira, José R. Loaiza
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-48852-4

The subgingival microbial community of feline periodontitis and gingivostomatitis: characterization and comparison between diseased and healthy cats
Cited by: 28
Author(s): Marjory Xavier Rodrigues, R.C. Bicalho, Nadine Fiani, Svetlana Lima, Santiago Peralta
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-021-92870-0

Mucosa-associated gut microbiota reflects clinical course of ulcerative colitis
Cited by: 17
Author(s): Yunosuke Nishihara, Hitoshi Ogino, Masaru Tanaka, Eikichi Ihara, Keita Fukaura, Kusuki Nishioka, Takatoshi Chinen, Yoshimasa Tanaka, Jiro Nakayama, Dongchon Kang, Yoshihiro Ogawa
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92962-x

A unique volatile signature distinguishes malaria infection from other conditions that cause similar symptoms
Cited by: 5
Author(s): Hannier Pulido, Nina M. Stanczyk, Consuelo Μ. De Moraes, Mark C. Mescher
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93426-y

Recent expansion of marine protected areas matches with home range of grey reef sharks
Cited by: 8
Author(s): Lucas Bonnin, David Mouillot, Germain Boussarie, William D. Robbins, Jérémy J. Kiszka, Laurent Dagorn, Laurent Vigliola
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93779-4

Comparative analysis of oral-gut microbiota between captive and wild long-tailed macaque in Thailand
Cited by: 13
Author(s): Vorthon Sawaswong, Kesmanee Praianantathavorn, Prangwalai Chanchaem, Ariya Khamwut, Taratorn Kemthong, Yohei Hamada, Suchinda Malaivijitnond, Sunchai Payungporn
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94507-8

Minimal-moderate variation of human oral virome and microbiome in IgA deficiency
Cited by: 4
Author(s): Maria José de la Cruz Peña, Luis Ignacio González‐Granado, Inmaculada García-Heredia, Lucia Maestre Carballa, Manuel Martínez‐García
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94572-z

Clostridium butyricum enhances colonization resistance against Clostridioides difficile by metabolic and immune modulation
Cited by: 16
Author(s): Mao Hagihara, Tadashi Ariyoshi, Yasutoshi Kuroki, Shuhei Eguchi, Seiya Higashi, Takeshi Mori, Tsunemasa Nonogaki, Kenta Iwasaki, Makoto Yamashita, Nobuhiro Asai, Yusuke Koizumi, Koichiro Oka, Motomichi Takahashi, Yuka Yamagishi, Hiroshige Mikamo
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94418-8

Periodontitis induces endothelial dysfunction in mice
Cited by: 8
Author(s): Maria Parvaneh, Paul K. Witting, Jaqueline Ku, Tala Moradi, Elif İnan Eroğlu, Ben Freedman, Greg T. Sutherland, Andrew N. McCorkindale, Boris Guennewig, Phannaphat Choowong, Kim Bell-Anderson, Gregory J. Cooney, Shane R. Thomas, Jörg Eberhard
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94604-8

Local intestinal microbiota response and systemic effects of feeding black soldier fly larvae to replace soybean meal in growing pigs
Cited by: 10
Author(s): Soumya K. Kar, Dirkjan Schokker, Amy C. Harms, L. Kruijt, M.A. Smits, A.J.M. Jansman
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94880-4

Human beta defensin levels and vaginal microbiome composition in post-menopausal women diagnosed with lichen sclerosus
Cited by: 6
Author(s): Alexandra Brunner, Márta Medvecz, Nóra Makra, Miklós Sárdy, Kinga Komka, Máté Gugolya, Dóra Szabó, Márió Gajdács, Eszter Ostorházi
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-97057-1

Porphyromonas spp., Fusobacterium spp., and Bacteroides spp. dominate microbiota in the course of macropod progressive periodontal disease
Cited by: 7
Author(s): Sabine Yip, Manijeh Mohammadi‐Dehcheshmeh, David J. McLelland, Wayne Boardman, Sugiyono Saputra, Esmaeil Ebrahimie, Laura S. Weyrich, P. S. Bird, Darren J. Trott
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-97315-2

Tea plantations and their importance as host plants and hot spots for epiphytic cryptogams
Cited by: 1
Author(s): Grzegorz J. Wolski, Renata Piwowarczyk, Vítězslav Plášek, Martin Kukwa, Karolina Ruraż
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-96856-w

Secondary predation constrains DNA-based diet reconstruction in two threatened shark species
Cited by: 2
Author(s): Mark de Bruyn, Matteo Barbato, Joseph D. DiBattista, Matt K. Broadhurst
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98068-8

Phenology of Oithona similis demonstrates that ecological flexibility may be a winning trait in the warming Arctic
Cited by: 11
Author(s): Kaja Balazy, Rafał Boehnke, Emilia Trudnowska, Janne E. Søreide, Katarzyna Błachowiak‐Samołyk
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-98284-2

Presence and biodistribution of perfluorooctanoic acid (PFOA) in Paracentrotus lividus highlight its potential application for environmental biomonitoring
Cited by: 6
Author(s): Dario Savoca, Raffaella Melfi, Antonio Palumbo Piccionello, Salvatore Barreca, Silvestre Buscemi, Vincenzo Arizza, Marco Arculeo, Andrea Pace
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-99052-y

Potential roles of 1,5-anhydro-d-fructose in modulating gut microbiome in mice
Cited by: 2
Author(s): Takashi Ito, Tadahide Totoki, Seiya Takada, Shotaro Otsuka, Ikuro Maruyama
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-99314-9

Ileal mucosa-associated microbiota overgrowth associated with pathogenesis of primary biliary cholangitis
Cited by: 7
Author(s): Shogo Kitahata, Yasunori Yamamoto, Osamu Yoshida, Yoshio Terada, Tomoe Kawamura, Shinya Furukawa, Teru Kumagi, Masashi Hirooka, Eiji Takeshita, Masanori Abe, Yoshiou Ikeda, Yoichi Hiasa
Software Mentions: 1
Published: almost 5 years ago

10.1155/2013/906180

Epibenthic Assessment of a Renewable Tidal Energy Site
Cited by: 9
Author(s): Emma V. Sheehan, Sarah Gall, Sophie L. Cousens, Martin J. Attrill
Software Mentions: 1
Published: over 13 years ago

10.1155/2014/215418

Prescribed Burning and Clear-Cutting Effects on Understory Vegetation in aPinus canariensisStand (Gran Canaria)
Cited by: 5
Author(s): José Ramón Arévalo, S. Fernández-Lugo, Celia García-Domínguez, Agustín Naranjo‐Cigala, Federico Grillo, Leonor Calvo
Software Mentions: 1
Published: over 12 years ago

10.1155/2017/5930516

Effects of a Supraseasonal Drought on the Ecological Attributes of<i>Plagioscion squamosissimus</i>(Heckel, 1840) (Pisces, Sciaenidae) in a Brazilian Reservoir
Cited by: 4
Author(s): Antonia Elissandra Freire de Souza, Jônnata Fernandes de Oliveira, Danielle Peretti, Rodrigo Fernandes, Rodrigo Silva da Costa, José Luís Costa Novaes
Software Mentions: 1
Published: over 9 years ago

10.3390/s17102309

The Modular Optical Underwater Survey System
Cited by: 9
Author(s): Ruhul Amin, Benjamin L. Richards, William F. X. E. Misa, Jeremy C. Taylor, Dennis B. Miller, Audrey Rollo, Christopher Demarke, Hanumant Singh, Grace C. Young, Jeremy L. Childress, Justin E. Ossolinski, Russell T Reardon, Kyle Koyanagi
Software Mentions: 1
Published: almost 9 years ago

10.1007/s11325-020-02246-3

Relationships of sleep disturbance, intestinal microbiota, and postoperative pain in breast cancer patients: a prospective observational study
Cited by: 13
Author(s): Zhiwen Yao, Bing-Cheng Zhao, Xiao Yang, Shao-Hui Lei, Yumei Jiang, Ke-Xuan Liu
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13287-020-01902-5

Adipose-derived mesenchymal stem cells attenuate acute lung injury and improve the gut microbiota in septic rats
Cited by: 22
Author(s): Junyi Sun, Xianfei Ding, Shaohua Liu, Xiaoguang Duan, Huoyan Liang, Tongwen Sun
Software Mentions: 1
Published: almost 6 years ago

10.3390/toxics8030055

Effects of MP Polyethylene Microparticles on Microbiome and Inflammatory Response of Larval Zebrafish
Cited by: 16
Author(s): Nicholas Kurchaba, Bryan J. Cassone, Caleb Northam, Bernadette F. Ardelli, Christophe M. R. LeMoine
Software Mentions: 1
Published: about 6 years ago

10.3390/toxics9060126

Temperature and Aging Affect Glyphosate Toxicity and Fatty Acid Composition in Allonychiurus kimi (Lee) (Collembola)
Cited by: 4
Author(s): June Wee, Yun Sik Lee, Yongeun Kim, Jung‐Ho Son, Kijong Cho
Software Mentions: 1
Published: about 5 years ago

10.3390/toxins12080517

Varying Protein Levels Influence Metabolomics and the Gut Microbiome in Healthy Adult Dogs
Cited by: 26
Author(s): Eden Ephraim, Chun‐Yen Cochrane, Dennis E. Jewell
Software Mentions: 1
Published: about 6 years ago

10.1093/tas/txaa138

Evidence for the amnion-fetal gut-microbial axis in late gestation beef calves1
Cited by: 6
Author(s): Gwendolynn L Hummel, Kelly L Woodruff, Kathy J. Austin, Travis Smith, Hannah C Cunningham-Hollinger
Software Mentions: 1
Published: over 5 years ago

10.1038/s41398-020-0734-9

Intermittent cafeteria diet identifies fecal microbiome changes as a predictor of spatial recognition memory impairment in female rats
Cited by: 25
Author(s): Sarah‐Jane Leigh, Nadeem O. Kaakoush, Michael J. Bertoldo, R. Frederick Westbrook, Margaret J. Morris
Software Mentions: 1
Published: over 6 years ago

10.1038/s41398-021-01254-5

Antidepressants fluoxetine and amitriptyline induce alterations in intestinal microbiota and gut microbiome function in rats exposed to chronic unpredictable mild stress
Cited by: 52
Author(s): Weijie Zhang, Wan Qu, Hua Wang, Yan He
Software Mentions: 1
Published: over 5 years ago

10.1186/s13063-018-2739-8

Efficacy of Jia Wei Yang He formula as an adjunctive therapy for asthma: study protocol for a randomized, double blinded, controlled trial
Cited by: 2
Author(s): W. Jiang, Zifeng Ma, Huiyong Zhang, Henry Lynn, Beiqi Xu, Xiao Zhang, Rongrong Bi, Jiyou Fu, Yue Chen, Zhen Xiao, Zhijie Zhang, Zhenhui Lu
Software Mentions: 1
Published: about 8 years ago

10.1128/mBio.00198-16

Changes in the Eye Microbiota Associated with Contact Lens Wearing
Cited by: 152
Author(s): Hakdong Shin, Kenneth W. Price, Albert Luong, Jack M. Dodick, Lisa Park, Maria Gloria Domínguez-Bello
Software Mentions: 1
Published: over 10 years ago

10.1128/mBio.00560-16

The Microbial Signature Provides Insight into the Mechanistic Basis of Coral Success across Reef Habitats
Cited by: 124
Author(s): Alejandra Hernández‐Agreda, William Leggat, Pim Bongaerts, Tracy D. Ainsworth
Software Mentions: 1
Published: almost 10 years ago

10.1128/mBio.02058-16

The Assimilation of Diazotroph-Derived Nitrogen by Scleractinian Corals Depends on Their Metabolic Status
Cited by: 62
Author(s): Vanessa N. Bednarz, Renaud Grover, Jean‐François Maguer, Maoz Fine, Christine Ferrier‐Pagès
Software Mentions: 1
Published: over 9 years ago

10.1128/mBio.01703-16

Effects of the Dietary Protein and Carbohydrate Ratio on Gut Microbiomes in Dogs of Different Body Conditions
Cited by: 101
Author(s): Qinghong Li, Christian L. Lauber, Gail L. Czarnecki-Maulden, Yuanlong Pan, Steven S. Hannah
Software Mentions: 1
Published: over 9 years ago

10.1128/mBio.00470-17

Gut Microbiota Mediates the Protective Effects of Dietary Capsaicin against Chronic Low-Grade Inflammation and Associated Obesity Induced by High-Fat Diet
Cited by: 142
Author(s): Chao Kang, Bin Wang, Kanakaraju Kaliannan, Xiaolan Wang, Hedong Lang, Suocheng Hui, Li Huang, Yong Zhang, Ming Zhou, Mengting Chen, Mantian Mi
Software Mentions: 1
Published: about 9 years ago

10.1128/mBio.01809-17

Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits
Cited by: 44
Author(s): Alexander B. Chase, Ulaş Karaöz, Eoin L. Brodie, Zulema Gómez-Lunar, Adam C. Martiny, Jennifer B. H. Martiny
Software Mentions: 1
Published: over 8 years ago

10.1128/mBio.00319-18

Allometry and Ecology of the Bilaterian Gut Microbiome
Cited by: 26
Author(s): Scott Sherrill-Mix, Kevin McCormick, Abigail Lauder, Aubrey Bailey, Laurie Zimmerman, Yingying Li, Jean-Bosco N. Django, Paco Bertolani, Christelle Colin, John Hart, Térese B. Hart, Alexander V. Georgiev, Crickette Sanz, David Morgan, Rebeca Atencia, Debby Cox, Martin N. Muller, Volker Sommer, Alex K. Piel, Fiona Stewart, Sheri Speede, Joe Roman, Gary D. Wu, J.H.L. Taylor, Rudolf P. Bohm, Heather Marshall Rose, John K. Carlson, Deus Mjungu, Paul S. Schmidt, Celeste Gaughan, Joyslin I. Bushman, Ella Schmidt, Kyle Bittinger, Ronald G. Collman, Beatrice H. Hahn, Frederic D. Bushman
Software Mentions: 1
Published: over 8 years ago

10.1128/mBio.00441-18

Hospitalized Premature Infants Are Colonized by Related Bacterial Strains with Distinct Proteomic Profiles
Cited by: 32
Author(s): Christopher T. Brown, Weili Xiong, Matthew R. Olm, Brian C. Thomas, Robyn Baker, Brian Firek, Michael J. Morowitz, Robert L. Hettich, Jillian F. Banfield
Software Mentions: 1
Published: over 8 years ago

10.1128/mBio.02392-17

Structural Alteration of Gut Microbiota during the Amelioration of Human Type 2 Diabetes with Hyperlipidemia by Metformin and a Traditional Chinese Herbal Formula: a Multicenter, Randomized, Open Label Clinical Trial
Cited by: 229
Author(s): Xiaolin Tong, Jin-Quan Xu, Fengmei Lian, Xiaotong Yu, Yuwu Zhao, Li Xu, Menghui Zhang, Xiao-Feng Zhao, Jian Shen, Shengping Wu, Xiaoyan Pang, Jiaxing Tian, Chenhong Zhang, Qiang Zhou, Linhua Wang, Bing Pang, Feng Chen, Zhiping Peng, Jing Wang, Zhang Zhong, Chao Fang, Min Li, Limei Chen, Liping Zhao
Software Mentions: 1
Published: about 8 years ago

10.1128/mBio.01614-18

Ecological Analyses of Mycobacteria in Showerhead Biofilms and Their Relevance to Human Health
Cited by: 84
Author(s): Matthew J. Gebert, Manuel Delgado‐Baquerizo, Angela M. Oliverio, Tara M. Webster, Lauren M. Nichols, Jennifer R. Honda, Edward D. Chan, Jennifer Adjemian, Robert R. Dunn, Noah Fierer
Software Mentions: 1
Published: almost 8 years ago

10.1128/mBio.02566-18

Dynamics of Human Gut Microbiota and Short-Chain Fatty Acids in Response to Dietary Interventions with Three Fermentable Fibers
Cited by: 436
Author(s): Nielson T. Baxter, Alexander W. Schmidt, Arvind Venkataraman, Kwi S. Kim, Clive Waldron, Thomas M. Schmidt
Software Mentions: 1
Published: over 7 years ago

10.1128/mBio.02903-18

A More Robust Gut Microbiota in Calorie-Restricted Mice Is Associated with Attenuated Intestinal Injury Caused by the Chemotherapy Drug Cyclophosphamide
Cited by: 38
Author(s): Tao Liu, Yanqiu Wu, Linghua Wang, Xiaoyan Pang, Liping Zhao, Huijuan Yuan, Chenhong Zhang
Software Mentions: 1
Published: over 7 years ago

10.1128/mBio.00632-19

Alzheimer’s Disease Microbiome Is Associated with Dysregulation of the Anti-Inflammatory P-Glycoprotein Pathway
Cited by: 230
Author(s): John P. Haran, Shakti Bhattarai, Sage E. Foley, Protiva Dutta, Doyle V. Ward, Vanni Bucci, Beth A. McCormick
Software Mentions: 1
Published: about 7 years ago

10.1128/mBio.01470-19

Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters
Cited by: 6
Author(s): Margarita López-Fernández, Elias Broman, Domenico Simone, Stefan Bertilsson, Mark Dopson
Software Mentions: 1
Published: almost 7 years ago

10.1128/mBio.01733-19

Changes in Aphid Host Plant Diet Influence the Small-RNA Expression Profiles of Its Obligate Nutritional Symbiont, <i>Buchnera</i>
Cited by: 9
Author(s): Margaret W. Thairu, Allison K. Hansen
Software Mentions: 1
Published: over 6 years ago

10.3390/nu11092193

Sugar Beet Pectin Supplementation Did Not Alter Profiles of Fecal Microbiota and Exhaled Breath in Healthy Young Adults and Healthy Elderly
Cited by: 31
Author(s): Ran An, Ellen Wilms, Agnieszka Smolinska, Gerben D. A. Hermes, Ad Masclee, Paul de Vos, Henk A. Schols, Frederik J. van Schooten, Hauke Smidt, Daisy Jonkers, Erwin G. Zoetendal, Freddy J. Troost
Software Mentions: 1
Published: almost 7 years ago

10.3390/nu12030634

Microbiological and Immunological Markers in Milk and Infant Feces for Common Gastrointestinal Disorders: A Pilot Study
Cited by: 17
Author(s): Marina Aparicio, Claudio Alba, Juan M. Rodríguez, Leónides Fernández
Software Mentions: 1
Published: over 6 years ago

10.3390/nu11092128

New and Preliminary Evidence on Altered Oral and Gut Microbiota in Individuals with Autism Spectrum Disorder (ASD): Implications for ASD Diagnosis and Subtyping Based on Microbial Biomarkers
Cited by: 82
Author(s): Xuejun Kong, Jun Li, Murat Çetinbaş, Ruslan I. Sadreyev, Madelyn Koh, Hui Yu Huang, Adetaye Adeseye, Puhan He, Junli Zhu, H. Russell, Clara Hobbie, Kevi Liu, Andrew B. Onderdonk
Software Mentions: 1
Published: almost 7 years ago

10.3390/nu13051602

Administration of Bifidobacterium breve Improves the Brain Function of Aβ1-42-Treated Mice via the Modulation of the Gut Microbiome
Cited by: 34
Author(s): Guangsu Zhu, Jianxin Zhao, Hao Zhang, Gang Wang
Software Mentions: 1
Published: over 5 years ago

10.3390/nu10091298

Astaxanthin Prevents Alcoholic Fatty Liver Disease by Modulating Mouse Gut Microbiota
Cited by: 77
Author(s): Huilin Liu, Meihong Liu, Xueqi Fu, Ziqi Zhang, Liang Zhu, Xin Zheng, Jingsheng Liu
Software Mentions: 1
Published: almost 8 years ago

10.3390/nu13030757

Navy Bean Supplementation in Established High-Fat Diet-Induced Obesity Attenuates the Severity of the Obese Inflammatory Phenotype
Cited by: 7
Author(s): Jennifer M. Monk, Wenqing Wu, Dion Lepp, K. Peter Pauls, Lindsay E. Robinson, Krista A. Power
Software Mentions: 1
Published: over 5 years ago

10.3390/nu9090821

Modulation of Gut Microbiota of Overweight Mice by Agavins and Their Association with Body Weight Loss
Cited by: 51
Author(s): Alicia Huazano-García, Hakdong Shin, Mercedes G. López
Software Mentions: 1
Published: about 9 years ago

10.3390/nu13051400

Using Oral Microbiota Data to Design a Short Sucrose Intake Index
Cited by: 3
Author(s): Anders Esberg, Linda Eriksson, Pamela Hasslöf, Simon Haworth, Pernilla Lif Holgerson, Ingegerd Johansson
Software Mentions: 1
Published: over 5 years ago

10.3390/nu10101556

Low Diversity of Human Milk Oligosaccharides is Associated with Necrotising Enterocolitis in Extremely Low Birth Weight Infants
Cited by: 38
Author(s): Erik Wejryd, Magalí Martí, Giovanna Marchini, Anna Werme, Baldvin Jónsson, Eva Landberg, Thomas Abrahamsson
Software Mentions: 1
Published: almost 8 years ago

10.3390/nu11071541

Diversity of Gut Microbiota Affecting Serum Level of Undercarboxylated Osteocalcin in Patients with Crohn’s Disease
Cited by: 16
Author(s): Kohei Wagatsuma, Satoshi Yamada, Ao Mei, Minoru Matsuura, Hideaki Tsuji, Tomoya Iida, Kentaro Miyamoto, Koichiro Oka, Motomichi Takahashi, Kiyoshi Tanaka, Hiroshi Nakase
Software Mentions: 1
Published: about 7 years ago

10.3390/nu13051569

The TOTUM-63 Supplement and High-Intensity Interval Training Combination Limits Weight Gain, Improves Glycemic Control, and Influences the Composition of Gut Mucosa-Associated Bacteria in Rats on a High Fat Diet
Cited by: 12
Author(s): Marine Dupuit, Vivien Chavanelle, Benoît Chassaing, Fanny Perrière, Monique Etienne, Claire Plissonneau, Audrey Boscaro, Nicolas Barnich, Vincent Pialoux, Thierry Maugard, Florian Le Joubioux, Sébastien Peltier, Pascal Sirvent, Yolanda F. Otero, Nathalie Boisseau
Software Mentions: 1
Published: over 5 years ago

10.3390/nu13061982

Evaluation of the Cholesterol-Lowering Mechanism of Enterococcus faecium Strain 132 and Lactobacillus paracasei Strain 201 in Hypercholesterolemia Rats
Cited by: 15
Author(s): Lingshuang Yang, Xinqiang Xie, Ying Liu, Lei Wu, Congcong Fan, Tingting Liang, Yu X, Shuanghong Yang, Haixin Li, Jumei Zhang, Yu Ding, L. Xue, Moutong Chen, Juan Wang, Qingping Wu
Software Mentions: 1
Published: about 5 years ago

10.3390/nu11061345

Resistant Starch Is Actively Fermented by Infant Faecal Microbiota and Increases Microbial Diversity
Cited by: 21
Author(s): Geetha Gopalsamy, Elissa Mortimer, Paul Greenfield, Anthony R. Bird, Graeme P. Young, Claus T. Christophersen
Software Mentions: 1
Published: about 7 years ago

10.3390/nu13093247

Modifications in the Intestinal Functionality, Morphology and Microbiome Following Intra-Amniotic Administration (Gallus gallus) of Grape (Vitis vinifera) Stilbenes (Resveratrol and Pterostilbene)
Cited by: 13
Author(s): Mariana Juste Contin Gomes, Nikolai Kolba, Nikita Agarwal, Dean Kim, Adi Eshel, Omry Koren, Elad Tako
Software Mentions: 1
Published: almost 5 years ago

10.3390/nu12040937

Randomised Double-Blind Placebo-Controlled Trial of Inulin with Metronidazole in Non-Alcoholic Fatty Liver Disease (NAFLD)
Cited by: 31
Author(s): Clara Yieh Lin Chong, David W. Orr, Lindsay D. Plank, Tommi Vatanen, Justin M. O’Sullivan, Rinki Murphy
Software Mentions: 1
Published: over 6 years ago

10.3390/nu12072127

Circulating Short-Chain Fatty Acids Are Positively Associated with Adiposity Measures in Chinese Adults
Cited by: 17
Author(s): Yiqing Wang, Huijun Wang, Annie Green Howard, Katie A. Meyer, Matthew C. B. Tsilimigras, Christy L. Avery, Sha Wang, Shan Sun, Jiguo Zhang, Chang Su, Bing Zhang, Anthony A. Fodor
Software Mentions: 1
Published: about 6 years ago

10.3390/nu10070890

A Vegetarian Diet Is a Major Determinant of Gut Microbiota Composition in Early Pregnancy
Cited by: 70
Author(s): Helen L. Barrett, Luisa F. Gomez-Arango, Shelley A. Wilkinson, H. David McIntyre, Leonie K. Callaway, Mark Morrison, Marloes Dekker Nitert
Software Mentions: 1
Published: about 8 years ago

10.3390/nu13062107

Habitual Dietary Intake Affects the Altered Pattern of Gut Microbiome by Acarbose in Patients with Type 2 Diabetes
Cited by: 13
Author(s): Fumie Takewaki, Harushi Nakajima, Daiki Takewaki, Yoshitaka Hashimoto, Susumu Majima, Hiroshi Okada, Takafumi Senmaru, Emi Ushigome, Masahide Hamaguchi, Masahiro Yamazaki, Yoshiki Tanaka, Shunji Nakajima, Hiroshi Ohno, Michiaki Fukui
Software Mentions: 1
Published: about 5 years ago

10.3390/nu13062030

Acceleration of Small Intestine Development and Remodeling of the Microbiome Following Hyaluronan 35 kDa Treatment in Neonatal Mice
Cited by: 10
Author(s): Hala Chaaban, Kathryn Burge, Jeffrey Eckert, MaJoi Trammell, David W. Dyer, Ravi S. Keshari, Robert Silasi‐Mansat, Girija Regmi, Cristina Lupu, Misty Good, Steven J. McElroy, Florea Lupu
Software Mentions: 1
Published: about 5 years ago

10.3390/nu7063999

Pyrosequencing Analysis Reveals Changes in Intestinal Microbiota of Healthy Adults Who Received a Daily Dose of Immunomodulatory Probiotic Strains
Cited by: 47
Author(s): Julio Plaza‐Díaz, Jose Ángel Fernández-Caballero, Natalia Chueca, Féderico García, Carolina Gómez-Llorente, María José Sáez-Lara, Luis Fontana, Ángel Gil
Software Mentions: 1
Published: about 11 years ago

10.3390/nu12030681

Oral Microbiota Profile Associates with Sugar Intake and Taste Preference Genes
Cited by: 32
Author(s): Anders Esberg, Simon Haworth, Pamela Hasslöf, Pernilla Lif Holgerson, Ingegerd Johansson
Software Mentions: 1
Published: over 6 years ago

10.3390/nu12082220

Effect of Choline Forms and Gut Microbiota Composition on Trimethylamine-N-Oxide Response in Healthy Men
Cited by: 30
Author(s): Clara E. Cho, Niklas Aardema, Madison L Bunnell, Deanna Larson, Sheryl S. Aguilar, Janet R Bergeson, Olga Malysheva, Marie A. Caudill, Michael Lefevre
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0181531

Response of Posidonia oceanica seagrass and its epibiont communities to ocean acidification
Cited by: 28
Author(s): Katja Guilini, Miriam Weber, Dirk de Beer, M. Schneider, Massimiliano Molari, Christian Lott, Wanda Bodnar, Thibaud Mascart, Marleen De Troch, Ann Vanreusel
Software Mentions: 1
Published: about 9 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Penalties:

Papers Mentioning PERMANOVA 6,292