cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0122268

Culicidae Community Composition and Temporal Dynamics in Guapiaçu Ecological Reserve, Cachoeiras de Macacu, Rio de Janeiro, Brazil
Cited by: 28
Author(s): Jerônimo Alencar, Cecília Ferreira de Mello, Anthony Érico Guimarães, Hélcio R. Gil-Santana, Júlia dos Santos Silva, J Mallet, Raquel M. Gleiser
Software Mentions: 1
Published: over 9 years ago

10.1186/s12866-019-1514-7

Bacterial microbiomes of Ixodes scapularis ticks collected from Massachusetts and Texas, USA
Cited by: 42
Author(s): Santosh Thapa, Yan Zhang, Michael S. Allen
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0111889

Differences in Life-Histories Refute Ecological Equivalence of Cryptic Species and Provide Clues to the Origin of Bathyal Halomonhystera (Nematoda)
Cited by: 24
Author(s): Jelle Van Campenhout, Sofie Derycke, Tom Moens, Ann Vanreusel
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0009733

Benthic Composition of a Healthy Subtropical Reef: Baseline Species-Level Cover, with an Emphasis on Algae, in the Northwestern Hawaiian Islands
Cited by: 53
Author(s): Peter S. Vroom, Cristi L. Braun
Software Mentions: 1
Published: over 14 years ago

10.1186/s12866-021-02173-7

Association between aging-dependent gut microbiome dysbiosis and dry eye severity in C57BL/6 male mouse model: a pilot study
Cited by: 19
Author(s): Chang Ho Yoon, Jin Suk Ryu, Jin Young Moon, Mee Kum Kim
Software Mentions: 1
Published: over 3 years ago

10.3389/fmicb.2020.617800

Caeca Microbial Variation in Broiler Chickens as a Result of Dietary Combinations Using Two Cereal Types, Supplementation of Crude Protein and Sodium Butyrate
Cited by: 8
Author(s): Daniel Borda-Molina, Gábor Mátis, Máté Mackei, Zsuzsanna Neogrády, Korinna Huber, Jana Seifert, Amélia Camarinha‐Silva
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pone.0197502

Enhanced transfer of organic matter to higher trophic levels caused by ocean acidification and its implications for export production: A mass balance approach
Cited by: 4
Author(s): Tim Boxhammer, Jan Taucher, Lennart T. Bach, Eric P. Achterberg, María Algueró-Muñiz, Jessica Bellworthy, Jan Czerny, Mario Espósito, Mathias Haunost, Dana Hellemann, Andrea Ludwig, Jaw Chuen Yong, Maren Zark, Ulf Riebesell, Leif G. Anderson
Software Mentions: 1
Published: over 6 years ago

10.1186/s12866-019-1426-6

Using formalin fixed paraffin embedded tissue to characterize the preterm gut microbiota in necrotising enterocolitis and spontaneous isolated perforation using marginal and diseased tissue
Cited by: 20
Author(s): Christopher J. Stewart, Roxana Fatemizadeh, Pamela Parsons, Christopher A Lamb, Deborah A. Shady, Joseph F. Petrosino, Amy B. Hair
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0187650

Oil palm monoculture induces drastic erosion of an Amazonian forest mammal fauna
Cited by: 45
Author(s): Ana Cristina Mendes‐Oliveira, Carlos A. Peres, Paula Cristina Rodrigues de Almeida Maués, Geovana Linhares de Oliveira, Ivo Gabriel Barros Mineiro, Susanne Lúcia Silva de Maria, Renata de Lima
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2021.656269

Temporal and Spatial Changes in Phyllosphere Microbiome of Acacia Trees Growing in Arid Environments
Cited by: 11
Author(s): Ashraf Al-Ashhab, Shiri Meshner, Rivka Alexander-Shani, Hana Dimerets, Michael Brandwein, Yael Bar-Lavan, Gidon Winters
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0176419

Impact of life history traits on gene flow: A multispecies systematic review across oceanographic barriers in the Mediterranean Sea
Cited by: 110
Author(s): Marta Pascual, Borja Rives, Celia Schunter, Enrique Macpherson
Software Mentions: 1
Published: over 7 years ago

10.1186/s12866-019-1391-0

Comparative study of vulva and abdominal skin microbiota of healthy females with high and average BMI
Cited by: 18
Author(s): Rebecca Vongsa, Deborah Hoffman, Kristin Shepard, David W. Koenig
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0118390

Large-Scale Geographic Variation in Distribution and Abundance of Australian Deep-Water Kelp Forests
Cited by: 63
Author(s): Ezequiel M. Marzinelli, Stefan B. Williams, Russell C. Babcock, Neville S. Barrett, Craig R. Johnson, Alan Jordan, Gary A. Kendrick, Oscar Pizarro, Dan Smale, Peter D. Steinberg
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0139848

Community Structure and Function of Amphibian Skin Microbes: An Experiment with Bullfrogs Exposed to a Chytrid Fungus
Cited by: 73
Author(s): Jenifer B. Walke, Matthew H. Becker, Stephen C. Loftus, Leanna House, Thais L. Teotonio, Kevin P. C. Minbiole, Lisa K. Belden
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2019.00889

The Effect of Disease and Season to Hepatopancreas and Intestinal Mycobiota of Litopenaeus vannamei
Cited by: 21
Author(s): Juan Li, Haiying Jiang, Linmiao Li, Xiujuan Zhang, Jinping Chen
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0249613

Multisite evaluation of phenotypic plasticity for specialized metabolites, some involved in carrot quality and disease resistance
Cited by: 6
Author(s): Wilfried Chevalier, Sitti-Anlati Moussa, Miguel Medeiros Netto Ottoni, Cécile Dubois-Laurent, Sébastien Huet, Christophe Aubert, Elsa Desnoues, B. Navez, V. Cottet, Guillaume Chalot, Michel Jost, Laure Barrot, Gerald Freymark, Maarten Uittenbogaard, François Chaniet, Anita Suel, Marie-Hélène Bouvier Merlet, Latifa Hamama, Valérie Le Clerc, Mathilde Briard, Didier Peltier, Emmanuel Geoffriau
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0205307

Burn injury alters the intestinal microbiome’s taxonomic composition and functional gene expression
Cited by: 24
Author(s): Nadine Beckmann, Amanda M. Pugh, Charles C. Caldwell
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0222182

Can we teach a fish how to eat? The impact of bottom and surface feeding on survival and growth of hatchery-reared sea trout parr (Salmo trutta trutta L.) in the wild
Cited by: 5
Author(s): Tomasz Krepski, Robert Czerniawski
Software Mentions: 1
Published: about 5 years ago

10.1186/s12866-020-01843-2

The microbiome of diabetic foot ulcers: a comparison of swab and tissue biopsy wound sampling techniques using 16S rRNA gene sequencing
Cited by: 16
Author(s): Jason Travis, Matthew Malone, Honghua Hu, Abdul Baten, Khalid Johani, Flavia Huygens, Karen Vickery, Kirsten Benkendorff
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0049437

Effects of Reef Proximity on the Structure of Fish Assemblages of Unconsolidated Substrata
Cited by: 28
Author(s): Arthur L. Schultz, Hamish A. Malcolm, Daniel J Bucher, Stephen Smith
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0027103

Rapid Biodiversity Assessment and Monitoring Method for Highly Diverse Benthic Communities: A Case Study of Mediterranean Coralligenous Outcrops
Cited by: 63
Author(s): Silvija Kipson, Maïa Fourt, Núria Teixidó, Emma Cebrián, Edgar Casas, Enric Ballesteros, Míkel Zabala, Joaquim Garrabou
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0187935

Contrasts in the marine ecosystem of two Macaronesian islands: A comparison between the remote Selvagens Reserve and Madeira Island
Cited by: 25
Author(s): Alan M. Friedlander, Enric Ballesteros, Sabrina Clemente, Emanuel João Gonçalves, Andy Estep, Paul Rose, Enric Sala
Software Mentions: 1
Published: about 7 years ago

10.1186/s12866-021-02171-9

Defining the temporal evolution of gut dysbiosis and inflammatory responses leading to hepatocellular carcinoma in Mdr2 −/− mouse model
Cited by: 11
Author(s): Jason Behary, Anita Raposo, Nadia Amorim, Huimin Zheng, Lan Gong, Emily McGovern, Jinbiao Chen, K. Liu, Julia Beretov, C. Theocharous, M.T. Jackson, J. Seet-Lee, Geoffrey W. McCaughan, Emad El‐Omar, Amany Zekry
Software Mentions: 1
Published: over 3 years ago

10.3389/fmicb.2012.00444

Same, same but different: symbiotic bacterial associations in GBR sponges
Cited by: 44
Author(s): Nicole S. Webster, Heidi M. Luter, Rochelle M. Soo, Emmanuelle S. Botté, Rachel L. Simister, Dave Abdo, Steve W Whalan
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2020.00367

Metatranscriptomic Profiling Reveals the Effect of Breed on Active Rumen Eukaryotic Composition in Beef Cattle With Varied Feed Efficiency
Cited by: 18
Author(s): Yawei Zhang, Fuyong Li, Yanhong Chen, Hao Wu, Qingxiang Meng, Le Luo Guan
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0090223

Isolation and Identification of Oedogonium Species and Strains for Biomass Applications
Cited by: 43
Author(s): Rebecca Lawton, Rocky de Nys, Stephen Skinner, Nicholas A. Paul
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2018.02588

Exposure to Antibiotics Affects Saponin Immersion-Induced Immune Stimulation and Shift in Microbial Composition in Zebrafish Larvae
Cited by: 24
Author(s): Adrià López Nadal, David Peggs, G.F. Wiegertjes, Sylvia Brugman
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0044859

Macroalgal Extracts Induce Bacterial Assemblage Shifts and Sublethal Tissue Stress in Caribbean Corals
Cited by: 55
Author(s): Kathleen M. Morrow, Raphael Ritson‐Williams, Cliff Ross, Mark R. Liles, Valerie J. Paul
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0142409

Seasonal Shifts in Diet and Gut Microbiota of the American Bison (Bison bison)
Cited by: 80
Author(s): Gaddy T. Bergmann, Joseph M. Craine, Michael S. Robeson, Noah Fierer
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0038552

Bacterial and Phytoplankton Responses to Nutrient Amendments in a Boreal Lake Differ According to Season and to Taxonomic Resolution
Cited by: 24
Author(s): Sari Peura, Alexander Eiler, Minna Hiltunen, Hannu Nykänen, Marja Tiirola, Roger Jones
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0032742

The Structure of Mediterranean Rocky Reef Ecosystems across Environmental and Human Gradients, and Conservation Implications
Cited by: 266
Author(s): Enric Sala, Enric Ballesteros, Panagiotis Dendrinos, Antonio Franco, Francesco Ferretti, David G. Foley, Simonetta Fraschetti, Alan M. Friedlander, Joaquim Garrabou, Harun Güçlüsoy, Paolo Guidetti, Benjamin S. Halpern, Bernat Hereu, Alexandros A. Karamanlidis, Zafer Kızılkaya, Enrique Macpherson, Luisa Mangialajo, Simone Mariani, Fiorenza Micheli, António Pais, Kristin L. Riser, Andrew A. Rosenberg, Marta Sales, Kimberly A. Selkoe, Richard M. Starr, Fiona Tomàs, Míkel Zabala
Software Mentions: 1
Published: over 12 years ago

10.3389/fmicb.2019.01255

Diatom-Bacteria Interactions Modulate the Composition and Productivity of Benthic Diatom Biofilms
Cited by: 53
Author(s): Coco Koedooder, Willem Stock, Anne Willems, Sven Mangelinckx, Marleen De Troch, Wim Vyverman, Koen Sabbe
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0092628

Depth Refuge and the Impacts of SCUBA Spearfishing on Coral Reef Fishes
Cited by: 90
Author(s): Steven J. Lindfield, Jennifer L. McIlwain, Euan S. Harvey
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2017.01435

Microbial Community Structure and the Persistence of Cyanobacterial Populations in Salt Crusts of the Hyperarid Atacama Desert from Genome-Resolved Metagenomics
Cited by: 62
Author(s): Kari Finstad, Alexander J. Probst, Brian C. Thomas, Gary L. Andersen, Cecilia Demergasso, Alex Echeverría, R. Amundson, Jillian F. Banfield
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.591462

Differential Responses to Dietary Protein and Carbohydrate Ratio on Gut Microbiome in Obese vs. Lean Cats
Cited by: 6
Author(s): Qinghong Li, Yuanlong Pan
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0218274

Exploring the impact of Helicobacter pylori on gut microbiome composition
Cited by: 66
Author(s): Nihar Ranjan Dash, Ghalia Khoder, Aml Mohamed Nada, Mohammad Tahseen Al Bataineh
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0134647

Monitoring Spawning Activity in a Southern California Marine Protected Area Using Molecular Identification of Fish Eggs
Cited by: 39
Author(s): Alice E. Harada, Elise Anna Lindgren, Maiko Hermsmeier, Peter Rogowski, Eric Terrill, Ronald S. Burton
Software Mentions: 1
Published: about 9 years ago

10.1186/s42523-021-00083-7

Effects of calcium level and source, formic acid, and phytase on phytate degradation and the microbiota in the digestive tract of broiler chickens
Cited by: 8
Author(s): Jochen Krieg, Daniel Borda-Molina, W. Siegert, Vera Sommerfeld, Yung Ping, Hamid Reza Taheri, Dieter Feuerstein, Amélia Camarinha‐Silva, M. Rodehutscord
Software Mentions: 1
Published: over 3 years ago

10.1186/s12866-017-1064-9

The oral fungal mycobiome: characteristics and relation to periodontitis in a pilot study
Cited by: 91
Author(s): Brandilyn A. Peters, Jing Wu, Richard B. Hayes, Jiyoung Ahn
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2019.01572

Seasonal Changes of Airborne Bacterial Communities Over Tokyo and Influence of Local Meteorology
Cited by: 61
Author(s): Jun Uetake, Yutaka Tobo, Yasushi Uji, Thomas C. J. Hill, Paul J. DeMott, Sonia M. Kreidenweis, Ryohei Misumi
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0237874

Learning machine approach reveals microbial signatures of diet and sex in dog
Cited by: 14
Author(s): Elisa Scarsella, Bruno Stefanon, Michela Cintio, Danilo Licastro, Sandy Sgorlon, Simeone Dal Monego, Misa Sandri
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0035456

Acanthaster planci Outbreak: Decline in Coral Health, Coral Size Structure Modification and Consequences for Obligate Decapod Assemblages
Cited by: 42
Author(s): Matthieu Leray, Maxime Béraud, Arthur Anker, Yannick Chancerelle, Suzanne C. Mills
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0171456

Physiological plasticity related to zonation affects hsp70 expression in the reef-building coral Pocillopora verrucosa
Cited by: 16
Author(s): Davide Poli, Elena Fabbri, Stefano Goffredo, Valentina Airi, Silvia Franzellitti
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2020.01165

Cryoconite Hole Location in East-Antarctic Untersee Oasis Shapes Physical and Biological Diversity
Cited by: 14
Author(s): Klemens Weisleitner, A. Perras, Seraphin Hubert Unterberger, Christine Moissl-Eichinger, Dale T. Andersen, Birgit Sattler
Software Mentions: 1
Published: over 4 years ago

10.1186/s12866-020-01992-4

The pelvis urinary microbiome in patients with kidney stones and clinical associations
Cited by: 9
Author(s): Fengping Liu, Nan Zhang, Yunhong Wu, Jiang Peng, Tingting Jiang, Wang Yang, Yuwei Zhang, Qixiao Zhai, Yeqing Zou, Na Feng
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0086765

Patterns of the Non-Indigenous Isopod Cirolana harfordi in Sydney Harbour
Cited by: 8
Author(s): Ana B. Bugnot, Ross A. Coleman, Will F. Figueira, Ezequiel M. Marzinelli
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0224796

The gut microbiome of freshwater Unionidae mussels is determined by host species and is selectively retained from filtered seston
Cited by: 28
Author(s): Eric A. Weingarten, Carla L. Atkinson, Colin R. Jackson
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0081910

Determining the Metabolic Footprints of Hydrocarbon Degradation Using Multivariate Analysis
Cited by: 16
Author(s): Renee J. Smith, Thomas C. Jeffries, Eric M. Adetutu, Peter G. Fairweather, James G. Mitchell
Software Mentions: 1
Published: almost 11 years ago

10.7554/eLife.67175

Environmental fluctuations reshape an unexpected diversity-disturbance relationship in a microbial community
Cited by: 20
Author(s): Christopher P. Mancuso, Hyunseok Lee, Clare I. Abreu, Jeff Gore, Ahmad S. Khalil
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0139444

Using Fish Population Metrics to Compare the Effects of Artificial Reef Density
Cited by: 16
Author(s): Catheline Y.M. Froehlich, Richard J. Kline
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0021195

Development of Bacterial Biofilms on Artificial Corals in Comparison to Surface-Associated Microbes of Hard Corals
Cited by: 43
Author(s): Michael Sweet, Aldo Cróquer, John C. Bythell
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0218227

The role of alien species on plant-floral visitor network structure in invaded communities
Cited by: 18
Author(s): Víctor Parra‐Tabla, Diego F. Angulo, Cristopher Albor, María José Campos‐Navarrete, Juan Tún-Garrido, Paula Sosenski, Conchita Alonso, Tia‐Lynn Ashman, Gerardo Arceo‐Gómez
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0117936

The Effect of Filamentous Turf Algal Removal on the Development of Gametes of the Coral Orbicella annularis
Cited by: 6
Author(s): Neidy P. Cetz-Navarro, Eugenio Carpizo‐Ituarte, Julio Espinoza-Ávalos, Guillermina Chee-Barragán
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12866-018-1290-9

Different laboratory populations similar bacterial profile? The case of Glossina palpalis gambiensis
Cited by: 4
Author(s): Vangelis Doudoumis, Antonios A. Augustinos, Aggeliki Saridaki, Andrew G. Parker, Adly M. M. Abd-Alla, Kostas Bourtzis, George Tsiamis
Software Mentions: 1
Published: about 6 years ago

10.1186/s42523-020-00060-6

Development of the equine hindgut microbiome in semi-feral and domestic conventionally-managed foals
Cited by: 4
Author(s): Meredith Tavenner, Sue M. McDonnell, Amy S. Biddle
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2019.01848

Different Gut Microbial Profiles in Sub-Saharan African and South Asian Women of Childbearing Age Are Primarily Associated With Dietary Intakes
Cited by: 15
Author(s): Minghua Tang, Daniel N. Frank, Antoinette Tshefu, Adrien Lokangaka, Shivaprasad S. Goudar, Sangappa Dhaded, Manjunath S Somannavar, Audrey E. Hendricks, Diana Ir, Charles E. Robertson, Jennifer Kemp, Rebecca L. Lander, Jamie E Westcott, K. Michael Hambidge, Nancy F. Krebs
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0256685

High biogeographic and latitudinal variability in gastropod drilling predation on molluscs along the eastern Indian coast: Implications on the history of fossil record of drillholes
Cited by: 1
Author(s): Subhronil Mondal, Hindolita Chakraborty, Sandip Saha, Sahana Dey, Deepjay Sarkar
Software Mentions: 1
Published: about 3 years ago

10.3389/fmicb.2021.632715

Experimental Warming Reduces Survival, Cold Tolerance, and Gut Prokaryotic Diversity of the Eastern Subterranean Termite, Reticulitermes flavipes (Kollar)
Cited by: 8
Author(s): Rachel A. Arango, Sean D. Schoville, Cameron R. Currie, Camila Carlos‐Shanley
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-85396-y

Fish associations with shallow water subsea pipelines compared to surrounding reef and soft sediment habitats
Cited by: 11
Author(s): Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0173818

Dynamic changes of the respiratory microbiota and its relationship to fecal and blood microbiota in healthy young cats
Cited by: 52
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Megan Grobman, Amber Graham, Kaitlin Bishop, Leah A. Cohn, Carol R. Reinero
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0113068

Fast Growing, Healthy and Resident Green Turtles (Chelonia mydas) at Two Neritic Sites in the Central and Northern Coast of Peru: Implications for Conservation
Cited by: 26
Author(s): Ximena Vélez‐Zuazo, Javier Quiñónes, Aldo S. Pacheco, Luciana Klinge, Evelyn Paredes, Sixto Quispe, Shaleyla Kelez
Software Mentions: 1
Published: about 10 years ago

10.3389/fmicb.2019.00093

Production of Naturally γ-Aminobutyric Acid-Enriched Cheese Using the Dairy Strains Streptococcus thermophilus 84C and Lactobacillus brevis DSM 32386
Cited by: 27
Author(s): Ilaria Carafa, Giorgia Stocco, T. Nardin, R. Larcher, Giovanni Bittante, Kieran Tuohy, Elena Franciosi
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2018.02209

Dietary Bile Salt Types Influence the Composition of Biliary Bile Acids and Gut Microbiota in Grass Carp
Cited by: 27
Author(s): Fan Xiong, Shan Wu, Jing Zhang, Ivan Jakovlić, Wen Xiang Li, Hong Zou, Ming Li, Gui Tang Wang
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0217556

Wildlife usage indicates increased similarity between reclaimed upland habitat and mature boreal forest in the Athabasca Oil Sands Region of Alberta, Canada
Cited by: 11
Author(s): Virgil C. Hawkes, Travis G. Gerwing
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0158007

The Role of Maternal Nutrition on Oocyte Size and Quality, with Respect to Early Larval Development in The Coral-Eating Starfish, Acanthaster planci
Cited by: 38
Author(s): Ciemon F. Caballes, Morgan S. Pratchett, Alexander M. Kerr, Jairo Rivera-Posada
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0203748

Impact of violacein from Chromobacterium violaceum on the mammalian gut microbiome
Cited by: 14
Author(s): Heidi Pauer, Cristiane Cassiolato Pires Hardoim, Felipe Lopes Teixeira, Karla Rodrigues Miranda, Davi da Silva Barbirato, Denise P. Carvalho, L. Caetano M. Antunes, Álvaro C. Leitão, Leandro Araújo Lobo, Regina Maria Cavalcanti Pilotto Domingues
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0213926

Diversity and shifts of the bacterial community associated with Baikal sponge mass mortalities
Cited by: 34
Author(s): С. И. Беликов, Natalia Belkova, Tatyana V. Butina, Lubov Chernogor, Alexandra Martynova–Van Kley, Armen Nalian, Colin Rorex, И. В. Ханаев, O. O. Maikova, Sergey Feranchuk
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0080510

Feeding Preferences of Abyssal Macrofauna Inferred from In Situ Pulse Chase Experiments
Cited by: 24
Author(s): Rachel M. Jeffreys, Ciara Burke, Alan J. Jamieson, Bhavani Narayanaswamy, Henry A. Ruhl, Kenneth L. Smith, Ursula Witte
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2017.00784

Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle
Cited by: 23
Author(s): Cynthia B. Silveira, Gustavo Bueno Gregoracci, Felipe H. Coutinho, Genivaldo G. Z. Silva, John M. Haggerty, Louisi Souza de Oliveira, Anderson de Souza Cabral, Carlos Eduardo de Rezende, Cristiane C. Thompson, Ronaldo B. Francini‐Filho, Robert A. Edwards, Elizabeth A. Dinsdale, Fabiano L. Thompson
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0127616

Decadal Changes in the Abundance and Length of Snapper (Chrysophrys auratus) in Subtropical Marine Sanctuaries
Cited by: 34
Author(s): Hamish A. Malcolm, Arthur L. Schultz, Patrick Sachs, Nicola Johnstone, Alan Jordan
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2019.02459

The Stain of the Original Salt: Red Heats on Chrome Tanned Leathers and Purple Spots on Ancient Parchments Are Two Sides of the Same Ecological Coin
Cited by: 12
Author(s): Nicoletta Perini, F. Mercuri, María Cristina Thaller, S. Orlanducci, Domenico Castiello, Valerio Talarico, Luciana Migliore
Software Mentions: 1
Published: about 5 years ago

10.1186/s12866-018-1362-x

Diet, physical activity and screen time but not body mass index are associated with the gut microbiome of a diverse cohort of college students living in university housing: a cross-sectional study
Cited by: 43
Author(s): Corrie M. Whisner, Juan Maldonado, Brandon Dente, Rosa Krajmalnik‐Brown, Meg Bruening
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-85484-z

Exodontia associated bacteremia in horses characterized by next generation sequencing
Cited by: 3
Author(s): Kile S. Townsend, Philip J. Johnson, Alison M. LaCarrubba, Lynn M. Martin, Aaron C. Ericsson
Software Mentions: 1
Published: over 3 years ago

10.3389/fmicb.2019.02634

Exogenous Nitric Oxide and Phosphorus Stress Affect the Mycorrhization, Plant Growth, and Associated Microbes of Carya illinoinensis Seedlings Colonized by Tuber indicum
Cited by: 12
Author(s): Xiaoping Zhu, Xin Li, Chenguang Wu, Lei Ye, Zongjing Kang
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0191232

Evaluation of bloodstream infections, Clostridium difficile infections, and gut microbiota in pediatric oncology patients
Cited by: 23
Author(s): Bryan T. Nycz, Samuel R. Dominguez, Deborah Friedman, Joanne M. Hilden, Diana Ir, Charles E. Robertson, Daniel N. Frank
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0146329

Agricultural Land Use Determines the Trait Composition of Ground Beetle Communities
Cited by: 41
Author(s): Helena I. Hanson, Erkki Palmu, Klaus Birkhofer, Henrik G. Smith, Katarina Hedlund
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-021-85750-0

Functional profiling of COVID-19 respiratory tract microbiomes
Cited by: 21
Author(s): Niina Haiminen, Filippo Utro, Ed Seabolt, Laxmi Parida
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0096358

An Invasive Vector of Zoonotic Disease Sustained by Anthropogenic Resources: The Raccoon Dog in Northern Europe
Cited by: 38
Author(s): Karmen Süld, Harri Valdmann, Leidi Laurimaa, Egle Soe, John Davison, Urmas Saarma
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-021-85897-w

Evaluation of the gut microbiome in association with biological signatures of inflammation in murine polytrauma and shock
Cited by: 6
Author(s): Sandra A. Appiah, Christine L. Foxx, Dominik Langgartner, Annette Palmer, Cristian A. Zambrano, Sonja Braumüller, Evan J. Schaefer, Ulrich Wachter, Brooke L. Elam, Peter Radermacher, Christopher E. Stamper, Jared D. Heinze, Stephanie Salazar, Amalia K. Luthens, Andrea L. Arnold, Stefan O. Reber, Markus Huber‐Lang, Christopher A. Lowry, Rebecca Halbgebauer
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0124162

Macroalgae Inhibits Larval Settlement and Increases Recruit Mortality at Ningaloo Reef, Western Australia
Cited by: 51
Author(s): Fiona J. Webster, Russell C. Babcock, M. van Keulen, N.R. Loneragan
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2018.00946

Geographical and Cultivar Features Differentiate Grape Microbiota in Northern Italy and Spain Vineyards
Cited by: 82
Author(s): Valerio Mezzasalma, Anna Sandionigi, Lorenzo Guzzetti, Andrea Galimberti, S. Grando, Javier Tardáguila, Massimo Labra
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-86052-1

Retinitis pigmentosa is associated with shifts in the gut microbiome
Cited by: 15
Author(s): Oksana Kutsyr, Lucía Maestre‐Carballa, Mónica Lluesma-Gomez, Manuel Martínez‐García, Nicolás Cuenca, Pedro Lax
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0228171

Sugar, amino acid and inorganic ion profiling of the honeydew from different hemipteran species feeding on Abies alba and Picea abies
Cited by: 26
Author(s): Basel Shaaban, Victoria Seeburger, Annette Schroeder, Gertrud Lohaus
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2020.569366

Inoculation With the Plant-Growth-Promoting Rhizobacterium Pseudomonas fluorescens LBUM677 Impacts the Rhizosphere Microbiome of Three Oilseed Crops
Cited by: 21
Author(s): J. Jiménez, Amy Novinscak, Martin Filion
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0091881

Similar Resilience Attributes in Lakes with Different Management Practices
Cited by: 24
Author(s): Didier L. Baho, Stina Drakare, Richard K. Johnson, Craig R. Allen, David G. Angeler
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2021.613356

Safety and Efficacy of a Phage, kpssk3, in an in vivo Model of Carbapenem-Resistant Hypermucoviscous Klebsiella pneumoniae Bacteremia
Cited by: 11
Author(s): Yun-Long Shi, Yuan Peng, Yixin Zhang, Yu Chen, Cheng Zhang, X. G. Luo, Yajie Chen, Zhiqiang Yuan, Jing Chen, Yanhong Gong
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0091841

Large-Scale Assessment of Mediterranean Marine Protected Areas Effects on Fish Assemblages
Cited by: 139
Author(s): Paolo Guidetti, Pasquale Baiata, Enric Ballesteros, Antonio Franco, Bernat Hereu, Enrique Macpherson, Fiorenza Micheli, António Pais, Pieraugusto Panzalis, Andrew A. Rosenberg, Michel Zabala, Enric Sala
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2019.02833

Impact of Sample Preservation and Manipulation on Insect Gut Microbiome Profiling. A Test Case With Fruit Flies (Diptera, Tephritidae)
Cited by: 21
Author(s): Maarten De Cock, M. Virgilio, Peter Vandamme, Antonios A. Augustinos, Kostas Bourtzis, Anne Willems, M. De Meyer
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12866-020-02037-6

Lower methane emissions were associated with higher abundance of ruminal Prevotella in a cohort of Colombian buffalos
Cited by: 17
Author(s): Sandra Bibiana Aguilar Marín, Claudia Lorena Betancur-Murillo, Gustavo Isaza, Henry Mesa, Juan Jovel
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2018.00796

Key Role of Alphaproteobacteria and Cyanobacteria in the Formation of Stromatolites of Lake Dziani Dzaha (Mayotte, Western Indian Ocean)
Cited by: 31
Author(s): Emmanuelle Gérard, Siham de Goeyse, Mylène Hugoni, Hélène Agogué, Laurent Richard, Vincent Milesi, François Guyot, Léna Lecourt, Stéphan Borensztajn, Marie-Béatrice Joseph, Thomas Leclerc, Gérard Sarazin, Didier Jézéquel, Christophe Leboulanger, Magali Ader
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0153192

Using Stable Isotopes to Infer the Impacts of Habitat Change on the Diets and Vertical Stratification of Frugivorous Bats in Madagascar
Cited by: 12
Author(s): Kim E. Reuter, Abigail R. Wills, Raymond W. Lee, Erik E. Cordes, Brent J. Sewall
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.00553

Chemical Dispersant Enhances Microbial Exopolymer (EPS) Production and Formation of Marine Oil/Dispersant Snow in Surface Waters of the Subarctic Northeast Atlantic
Cited by: 8
Author(s): Laura Durán Suja, Xindi Chen, Stephen Summers, David M. Paterson, Tony Gutiérrez
Software Mentions: 1
Published: over 5 years ago

Projects: cran: PERMANOVA

Papers Mentioning PERMANOVA 6,292