cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2014.00616

Microbial interactions and the ecology and evolution of Hawaiian Drosophilidae
Cited by: 3
Author(s): Timothy K. O’Connor, Parris T. Humphrey, Richard T. Lapoint, Noah K. Whiteman, Patrick M. O’Grady
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2019.01381

Microbiota Analysis for the Optimization of Campylobacter Isolation From Chicken Carcasses Using Selective Media
Cited by: 12
Author(s): Jinshil Kim, Hakdong Shin, Hyeeun Park, Hayan Jung, Junhyung Kim, Seongbeom Cho, Sangryeol Ryu, Byeonghwa Jeon
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0133974

Inferring Phytoplankton, Terrestrial Plant and Bacteria Bulk δ¹³C Values from Compound Specific Analyses of Lipids and Fatty Acids
Cited by: 36
Author(s): Sami J. Taipale, Elina Peltomaa, Minna Hiltunen, Roger Jones, Martin W. Hahn, Christina Biasi, Michael T. Brett
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0225845

The effect of carbohydrate sources: Sucrose, invert sugar and components of mānuka honey, on core bacteria in the digestive tract of adult honey bees (Apis mellifera)
Cited by: 22
Author(s): MA Taylor, Alastair W. Robertson, Patrick J. Biggs, Kate Richards, Daniel Fiske Jones, Shanthi G. Parkar
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0052108

Assessing Dispersal Patterns of Fish Propagules from an Effective Mediterranean Marine Protected Area
Cited by: 44
Author(s): Antonio Franco, Giovanni Coppini, J. M. Pujolar, Giulio A. De Leo, Marino Gatto, Vladyslav Lyubartsev, Paco Melià, Lorenzo Zane, Paolo Guidetti
Software Mentions: 1
Published: over 13 years ago

10.1186/s13293-020-00346-z

Analysis of sex differences in dietary copper-fructose interaction-induced alterations of gut microbial activity in relation to hepatic steatosis
Cited by: 5
Author(s): Ming Song, Fang Yuan, Xiaohong Li, Xipeng Ma, Xinmin Yin, Eric C. Rouchka, Xiang Zhang, Zhongbin Deng, Russell A. Prough, Craig J. McClain
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.591358

Soil Bacterial and Archaeal Communities and Their Potential to Perform N-Cycling Processes in Soils of Boreal Forests Growing on Well-Drained Peat
Cited by: 13
Author(s): Marika Truu, Hiie Nõlvak, Ivika Ostonen, Kristjan Oopkaup, Martin Maddison, Teele Ligi, Mikk Espenberg, Veiko Uri, Ülo Mander, Jaak Truu
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0108801

Reproductive Strategies of the Insidious Fish Ectoparasite, Neobenedenia sp. (Capsalidae: Monogenea)
Cited by: 27
Author(s): Truong Dinh Hoai, Kate S. Hutson
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2019.02851

Effect of Different Substrates on Soil Microbial Community Structure and the Mechanisms of Reductive Soil Disinfestation
Cited by: 22
Author(s): Xian-Zheng Tan, Hongkai Liao, Liangzuo Shu, Huaiying Yao
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0068533

Host-Specific Interactions with Environmental Factors Shape the Distribution of Symbiodinium across the Great Barrier Reef
Cited by: 56
Author(s): Linda Tonk, Eugenia M. Sampayo, Scarla J. Weeks, Marites Canto, Ove Hoegh‐Guldberg
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0130053

Partitioning the Relative Importance of Phylogeny and Environmental Conditions on Phytoplankton Fatty Acids
Cited by: 196
Author(s): Aaron W. E. Galloway, Monika Winder
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0244458

Field-based body temperatures reveal behavioral thermoregulation strategies of the Atlantic marsh fiddler crab Minuca pugnax
Cited by: 6
Author(s): Sarah Hews, Zahkeyah Allen, Adrienne Baxter, Jacquline Rich, Zahida Sheikh, Kayla Taylor, Jenny Wu, Heidi Zakoul, Renae J. Brodie
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0115601

Changes in Nematode Communities in Different Physiographic Sites of the Condor Seamount (North-East Atlantic Ocean) and Adjacent Sediments
Cited by: 21
Author(s): Daniela Zeppilli, Lucia Bongiorni, Ricardo Serrão Santos, Ann Vanreusel
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2021.730477

Assessing the Influence of Environmental Sources on the Gut Mycobiome of Tibetan Macaques
Cited by: 3
Author(s): Binghua Sun, Yingna Xia, Samuel Davison, Andrés Gómez, Paul A. Garber, Katherine R. Amato, Xiaojuan Xu, Dong Xia, Xi Wang, Jin Hua Li
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0203072

Effects of depth on reef fish communities: Insights of a “deep refuge hypothesis” from Southwestern Atlantic reefs
Cited by: 25
Author(s): Pedro Henrique Cipresso Pereira, Cláudio Henrique Rodrigues de Macedo, José de Anchieta C. C. Nunes, Laura Fernandes de Barros Marangoni, Adalto Bianchini
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0106492

Embryonic Developmental Temperatures Modulate Thermal Acclimation of Performance Curves in Tadpoles of the Frog Limnodynastes peronii
Cited by: 36
Author(s): Frank Seebacher, Veronica S. Grigaltchik
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2018.01848

Isolation, Diversity, and Growth-Promoting Activities of Endophytic Bacteria From Tea Cultivars of Zijuan and Yunkang-10
Cited by: 56
Author(s): Xiaomei Yan, Zhi Wang, Mei Yu, Liqun Wang, Xu Wang, Qingshan Xu, Su Peng, Yu Zhou, Chaoling Wei
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2019.01886

Legitimate and Reliable Determination of the Age-Related Intestinal Microbiome in Young Piglets; Rectal Swabs and Fecal Samples Provide Comparable Insights
Cited by: 15
Author(s): R. Choudhury, Anouschka Middelkoop, J.E. Bolhuis, Michiel Kleerebezem
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0234378

Effect of dietary gossypol supplement on fermentation characteristics and bacterial diversity in the rumen of sheep
Cited by: 6
Author(s): CaiDie Wang, Yuqi Li, TunNiSa MaiTiSaiYiDi, Hongjian Yang, Kailun Yang
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0018078

Biological vs. Physical Mixing Effects on Benthic Food Web Dynamics
Cited by: 41
Author(s): Ulrike Braeckman, Pieter Provoost, Tom Moens, Karline Soetaert, Jack J. Middelburg, Magda Vincx, Jan Vanaverbeke
Software Mentions: 1
Published: over 15 years ago

10.3389/fmicb.2019.01083

The Variation of Nasal Microbiota Caused by Low Levels of Gaseous Ammonia Exposure in Growing Pigs
Cited by: 17
Author(s): Tongxin Wang, Qiongyu He, Weilei Yao, Yafei Shao, Li Ji, Feiruo Huang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0105863

Contrasting Light Spectra Constrain the Macro and Microstructures of Scleractinian Corals
Cited by: 15
Author(s): Rui J. M. Rocha, Ana M. B. Silva, María Helena Fernandes, Igor Cristino Silva Cruz, Rui Rosa, Ricardo Calado
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2020.00693

Recto-Anal Junction (RAJ) and Fecal Microbiomes of Cattle Experimentally Challenged With Escherichia coli O157:H7
Cited by: 6
Author(s): Raies A. Mir, Robert G. Schaut, Torey Looft, Heather K. Allen, Vijay Kumar Sharma, Indira T. Kudva
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0232831

Organic acid blend supplementation increases butyrate and acetate production in Salmonella enterica serovar Typhimurium challenged broilers
Cited by: 20
Author(s): Mashael R. Aljumaah, Manal M. Alkhulaifi, Alaeldein M. Abudabos, Abdulaziz Alabdullatifb, Aarif H. El‐Mubarak, Ali R. Al Suliman, Dragana Stanley
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2020.00312

Dietary Inulin and Trichuris suis Infection Promote Beneficial Bacteria Throughout the Porcine Gut
Cited by: 17
Author(s): Sophie Stolzenbach, Laura J. Myhill, Lee O’Brien Andersen, Łukasz Krych, Helena Mejer, Andrew R. Williams, Peter Nejsum, Christen Rune Stensvold, Dennis Sandris Nielsen, Stig Milan Thamsborg
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.629802

Metaproteomics Reveals Similar Vertical Distribution of Microbial Transport Proteins in Particulate Organic Matter Throughout the Water Column in the Northwest Pacific Ocean
Cited by: 1
Author(s): Ling-Fen Kong, Kunlun Yan, Zhang-Xian Xie, Yuexin He, Lin Lin, Hongkai Xu, Siqi Liu, Dazhi Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.02146

A Comparative Analysis of Microbial DNA Preparation Methods for Use With Massive and Branching Coral Growth Forms
Cited by: 14
Author(s): Alejandra Hernández‐Agreda, William Leggat, Tracy D. Ainsworth
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0059299

Generalization versus Specialization in Pollination Systems: Visitors, Thieves, and Pollinators of Hypoestes aristata (Acanthaceae)
Cited by: 32
Author(s): Eliška Padyšáková, Michael Bartoš, Robert Tropek, Štěpán Janeček
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2018.02343

Leaves of Indoor Ornamentals Are Biodiversity and Functional Hotspots for Fungi
Cited by: 9
Author(s): Alexander Mahnert, Rocel Amor Ortega, Christian Berg, Martín Grube, Gabriele Berg
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2020.00268

Microbiome in Cladonia squamosa Is Vertically Stratified According to Microclimatic Conditions
Cited by: 20
Author(s): Hyun-Ju Noh, Yung Mi Lee, Chae Haeng Park, Hong Kum Lee, Jang-Cheon Cho, Soon Gyu Hong
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.664257

Prenatal Depression, Breastfeeding, and Infant Gut Microbiota
Cited by: 10
Author(s): Nicole Rodriguez, Hein Min Tun, Catherine J. Field, Piushkumar J. Mandhane, James A. Scott, Anita L. Kozyrskyj
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0166379

Ontogenetic Characterization of the Intestinal Microbiota of Channel Catfish through 16S rRNA Gene Sequencing Reveals Insights on Temporal Shifts and the Influence of Environmental Microbes
Cited by: 84
Author(s): Jacob W. Bledsoe, Brian Peterson, Kelly S. Swanson, Brian C. Small
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2015.01022

Temporal stability of bacterial symbionts in a temperate ascidian
Cited by: 20
Author(s): Susanna López‐Legentil, Xavier Turon, Roger Espluga, Patrick M. Erwin
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2017.01531

High Spatial and Temporal Variations of Microbial Community along the Southern Catfish Gastrointestinal Tract: Insights into Dynamic Food Digestion
Cited by: 24
Author(s): Zhimin Zhang, Dapeng Li, Mohamed M. Refaey, Weigang Xu
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0164826

Evaluating the Effects of Different Vegetation Types on Necrophagous Fly Communities (Diptera: Calliphoridae; Sarcophagidae): Implications for Conservation
Cited by: 12
Author(s): Jorge Rodrigues de Sousa, Fernando da Silva Carvalho-Filho, Leandro Juen, Maria Cristina Espósito
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0152751

Gut Microbiome Developmental Patterns in Early Life of Preterm Infants: Impacts of Feeding and Gender
Cited by: 168
Author(s): Xiaomei Cong, Wanli Xu, Susan Janton, Wendy A. Henderson, Adam Matson, Jacqueline M. McGrath, Kendra Maas, Joerg Graf
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0059959

Fish Assemblages Associated with Natural and Anthropogenically-Modified Habitats in a Marine Embayment: Comparison of Baited Videos and Opera-House Traps
Cited by: 31
Author(s): Corey B. Wakefield, Paul D. Lewis, Teresa B. Coutts, David V. Fairclough, Timothy J. Langlois
Software Mentions: 1
Published: over 13 years ago

10.3390/nu13062030

Acceleration of Small Intestine Development and Remodeling of the Microbiome Following Hyaluronan 35 kDa Treatment in Neonatal Mice
Cited by: 10
Author(s): Hala Chaaban, Kathryn Burge, Jeffrey Eckert, MaJoi Trammell, David W. Dyer, Ravi S. Keshari, Robert Silasi‐Mansat, Girija Regmi, Cristina Lupu, Misty Good, Steven J. McElroy, Florea Lupu
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0080137

Modelling Coral Reef Futures to Inform Management: Can Reducing Local-Scale Stressors Conserve Reefs under Climate Change?
Cited by: 51
Author(s): Georgina G. Gurney, Jess Melbourne-Thomas, Rollan C. Geronimo, P. M. Aliño, Craig R. Johnson
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-021-94880-4

Human beta defensin levels and vaginal microbiome composition in post-menopausal women diagnosed with lichen sclerosus
Cited by: 6
Author(s): Alexandra Brunner, Márta Medvecz, Nóra Makra, Miklós Sárdy, Kinga Komka, Máté Gugolya, Dóra Szabó, Márió Gajdács, Eszter Ostorházi
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0142681

Effects of Seasonal Upwelling on Inorganic and Organic Matter Dynamics in the Water Column of Eastern Pacific Coral Reefs
Cited by: 16
Author(s): Ines Stuhldreier, Celeste Sánchez-Noguera, Tim Rixen, Jorge Cortés, Álvaro Morales, Christian Wild
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0065665

Additive Diversity Partitioning of Fish in a Caribbean Coral Reef Undergoing Shift Transition
Cited by: 36
Author(s): Gilberto Acosta‐González, Fabián Alejandro Rodríguez‐Zaragoza, Roberto C. Hernández-Landa, Jesús Ernesto Arias‐González
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0167809

Fish Distribution and Habitat Complexity on Banks of the Strait of Sicily (Central Mediterranean Sea) from Remotely-Operated Vehicle (ROV) Explorations
Cited by: 33
Author(s): Pierpaolo Consoli, Valentina Esposito, Pietro Battaglia, Chiara Altobelli, Teresa Romeo, Simonepietro Canese, Franco Andaloro
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2016.00321

Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
Cited by: 43
Author(s): Judith Lucas, Irina Koester, Antje Wichels, Jutta Niggemann, Thorsten Dittmar, Ulrich Callies, Karen Helen Wiltshire, Gunnar Gerdts
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0029133

Spatial Patterns of Parrotfish Corallivory in the Caribbean: The Importance of Coral Taxa, Density and Size
Cited by: 18
Author(s): George Roff, Mary H. Ledlie, Juan Carlos Ortíz, Peter J. Mumby
Software Mentions: 1
Published: over 14 years ago

10.1186/s12575-020-00131-7

Nasopharyngeal Microbiota Profiling of SARS-CoV-2 Infected Patients
Cited by: 68
Author(s): Flavio De Maio, Brunella Posteraro, Francesca Romana Ponziani, Paola Cattani, Antonio Gasbarrini, Maurizio Sanguinetti
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0201156

Comparison of the upper and lower airway microbiota in children with chronic lung diseases
Cited by: 26
Author(s): B. Ahmed, Michael J. Cox, Leah Cuthbertson, Phillip James, William Cookson, Jane C. Davies, Miriam F. Moffatt, Andrew Bush
Software Mentions: 1
Published: about 8 years ago

10.1242/bio.201411288

Differences in the fatty-acid composition of rodent spermatozoa are associated to levels of sperm competition
Cited by: 19
Author(s): Javier delBarco‐Trillo, Rafael Mateo, Eduardo R. S. Roldán
Software Mentions: 1
Published: over 11 years ago

10.1242/bio.013409

Changes in cell shape are correlated with metastatic potential in murine and human osteosarcomas
Cited by: 60
Author(s): Samanthe M. Lyons, Elaheh Alizadeh, Joshua Mannheimer, Katherine Schuamberg, Jordan Castle, Bryce Schroder, Philip Turk, Douglas H. Thamm, Ashok Prasad
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2019.00458

The Effects of Unfermented and Fermented Cow and Sheep Milk on the Gut Microbiota
Cited by: 14
Author(s): Elizabeth A. Rettedal, Eric Altermann, Nicole C. Roy, Julie E. Dalziel
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0033820

First Evidence of Immunomodulation in Bivalves under Seawater Acidification and Increased Temperature
Cited by: 114
Author(s): Valerio Matozzo, A. Chinellato, Marco Munari, Livio Finos, M. Bressan, María Gabriella Marin
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0102782

Ecological Shifts in Mediterranean Coralligenous Assemblages Related to Gorgonian Forest Loss
Cited by: 88
Author(s): Massimo Ponti, Rossella Angela Perlini, Vincenzo Ventra, Daniele Grech, Marco Abbiati, Carlo Cerrano
Software Mentions: 1
Published: about 12 years ago

10.1242/bio.045252

First data on microflora of loggerhead sea turtle (<i>Caretta caretta)</i> nests from the coastlines of Sicily (Italy)
Cited by: 10
Author(s): Delia Gambino, Maria Flaminia Persichetti, Antonino Gentile, Marco Arculeo, Giulia Visconti, V. Currò, Giulia Caracappa, Daniela Crucitti, Antonio Piazza, Francesca Mancianti, Simona Nardoni, Domenico Vicari, S. Caracappà
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0119567

Early Successional Microhabitats Allow the Persistence of Endangered Plants in Coastal Sand Dunes
Cited by: 25
Author(s): Eleanor A. Pardini, Kyle E. Vickstrom, Tiffany M. Knight
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2019.02689

Vasoactive Intestinal Peptide Deficiency Is Associated With Altered Gut Microbiota Communities in Male and Female C57BL/6 Mice
Cited by: 15
Author(s): Manpreet Bains, Caleb Laney, Annie E. Wolfe, Megan Orr, James A. Waschek, Aaron C. Ericsson, Glenn Dorsam
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0126685

The Effect of Sampling and Storage on the Fecal Microbiota Composition in Healthy and Diseased Subjects
Cited by: 144
Author(s): Danyta I. Tedjo, Daisy Jonkers, Paul H. M. Savelkoul, Ad Masclee, Niels van Best, Marieke Pierik, John Penders
Software Mentions: 1
Published: about 11 years ago

10.1242/bio.045591

High levels of floridoside at high salinity link osmoadaptation with bleaching susceptibility in the cnidarian-algal endosymbiosis
Cited by: 17
Author(s): Hagen M. Gegner, Nils Rädecker, Michael A. Ochsenkühn, Marcelle Muniz Barreto, Maren Ziegler, Jessica Reichert, Patrick Schubert, Thomas Wilke, Christian R. Voolstra
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0132973

Bored to Death: Community-Wide Effect of Predation on a Foundation Species in a Low-Disturbance Arctic Subtidal System
Cited by: 6
Author(s): Eugeniy Yakovis, Anna Artemieva
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0182766

Phytoplasma infection of a tropical root crop triggers bottom-up cascades by favoring generalist over specialist herbivores
Cited by: 9
Author(s): Kris A. G. Wyckhuys, Ignazio Graziosi, Dharani Dhar Burra, Abigail J. Walter
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0083883

Recovery of a Temperate Reef Assemblage in a Marine Protected Area following the Exclusion of Towed Demersal Fishing
Cited by: 62
Author(s): Emma V. Sheehan, Timothy Stevens, Sarah Gall, Sophie L. Cousens, Martin J. Attrill
Software Mentions: 1
Published: over 12 years ago

10.1007/s10530-017-1634-7

Historical ecology of a biological invasion: the interplay of eutrophication and pollution determines time lags in establishment and detection
Cited by: 39
Author(s): Paolo G. Albano, Ivo Gallmetzer, Alexandra Haselmair, Adam Tomášových, Michael Stachowitsch, Martin Zuschin
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0183786

Maternal treatment with short-chain fatty acids modulates the intestinal microbiota and immunity and ameliorates type 1 diabetes in the offspring
Cited by: 43
Author(s): James C. Needell, Diana Ir, Charles E. Robertson, Miranda Kroehl, Daniel N. Frank, Danny Zipris
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0200349

Macrobenthic communities in a shallow normoxia to hypoxia gradient in the Humboldt upwelling ecosystem
Cited by: 18
Author(s): Maritza Fajardo, Diego Andrade, Jessica Bonicelli, Melanie Bon, Gonzalo E. Gómez, José M. Riascos, Aldo S. Pacheco
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0221291

Stakeholder valuation of soil ecosystem services from New Zealand’s planted forests
Cited by: 3
Author(s): Graham Coker, Mathis Richard, Karen Bayne, Simeon J. Smaill, Loretta G. Garrett, Amanda Matson, Steven A. Wakelin
Software Mentions: 1
Published: almost 7 years ago

10.3390/nu7063999

Pyrosequencing Analysis Reveals Changes in Intestinal Microbiota of Healthy Adults Who Received a Daily Dose of Immunomodulatory Probiotic Strains
Cited by: 47
Author(s): Julio Plaza‐Díaz, Jose Ángel Fernández-Caballero, Natalia Chueca, Féderico García, Carolina Gómez-Llorente, María José Sáez-Lara, Luis Fontana, Ángel Gil
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0198021

Stimulated and unstimulated saliva samples have significantly different bacterial profiles
Cited by: 50
Author(s): Sonia Gomar‐Vercher, Áurea Simón-Soro, José María Montiel-Company, José Manuel Almerich‐Silla, Álex Mira
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0144161

Diel Vertical Dynamics of Gelatinous Zooplankton (Cnidaria, Ctenophora and Thaliacea) in a Subtropical Stratified Ecosystem (South Brazilian Bight)
Cited by: 22
Author(s): Miodeli Nogueira Júnior, Frederico Pereira Brandini, Juan Carlos Ugaz Codina
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0193545

Effects of Didymosphenia geminata massive growth on stream communities: Smaller organisms and simplified food web structure
Cited by: 22
Author(s): Rubén Ladrera, Joan Gomà, Narcı́s Prat
Software Mentions: 1
Published: over 8 years ago

10.3897/BDJ.9.e54843

The effect of edaphic factors on the distribution and abundance of ants (Hymenoptera: Formicidae) in Iran
Cited by: 2
Author(s): Mohammad Réza Mohseni, Shahrokh Pashaei Rad
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0098700

The Seeding and Cultivation of a Tropical Species of Filamentous Ulva for Algal Biomass Production
Cited by: 36
Author(s): Christina Carl, Rocky de Nys, Nicholas A. Paul
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0020094

Meiofauna in the Gollum Channels and the Whittard Canyon, Celtic Margin—How Local Environmental Conditions Shape Nematode Structure and Function
Cited by: 73
Author(s): Jeroen Ingels, Alexei V. Tchesunov, Ann Vanreusel
Software Mentions: 1
Published: over 15 years ago

10.3389/fmicb.2021.712212

Administration of All-Trans Retinoic Acid to Pregnant Sows Alters Gut Bacterial Community of Neonatal Piglets With Different Hoxa1 Genotypes
Cited by: 1
Author(s): Haimei Zhou, Huadong Wu, Yixin Chen, Wanjie Zou, Wei Lü, Yan He
Software Mentions: 1
Published: about 5 years ago

10.3897/BDJ.4.e8233

Environmental variability and heavy metal concentrations from five lagoons in the Ionian Sea (Amvrakikos Gulf, W Greece)
Cited by: 5
Author(s): Katerina Vasileiadou, Christina Pavloudi, Ioanna Kalantzi, Eugenia T. Apostolaki, Georgios Chatzigeorgiou, Eva Chatzinikolaou, Evangelos Pafilis, Nikos Papageorgiou, Lucia Fanini, Spyridon Konstas, Nina Fragopoulou, Christos Arvanitidis
Software Mentions: 1
Published: almost 10 years ago

10.3897/BDJ.7.e37968

Fauna of nocturnal moth species collected in a semi-natural grassland at Kanpu-zan in northern Japan
Cited by: 1
Author(s): Masaru Kamikura, Yuzu Sakata
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-021-97057-1

Porphyromonas spp., Fusobacterium spp., and Bacteroides spp. dominate microbiota in the course of macropod progressive periodontal disease
Cited by: 7
Author(s): Sabine Yip, Manijeh Mohammadi‐Dehcheshmeh, David J. McLelland, Wayne Boardman, Sugiyono Saputra, Esmaeil Ebrahimie, Laura S. Weyrich, P. S. Bird, Darren J. Trott
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2019.01192

Community Structure of Bacteria Associated With Drifting Sargassum horneri, the Causative Species of Golden Tide in the Yellow Sea
Cited by: 19
Author(s): Xiangyuan Mei, Chunhui Wu, Jianmin Zhao, Yun Tian, Peng Jiang
Software Mentions: 1
Published: about 7 years ago

10.1186/s13040-018-0187-3

Knomics-Biota - a system for exploratory analysis of human gut microbiota data
Cited by: 27
Author(s): Daria Efimova, Alexander Tyakht, Anna Popenko, Anatoly Vasilyev, Ilya Altukhov, Nikita V. Dovidchenko, Vera Odintsova, Natalia Klimenko, Robert Loshkarev, Maria Pashkova, A. N. Elizarova, Viktoriya Voroshilova, Sergei Slavskii, Yury Pekov, É. D. Filippova, Tatiana I. Shashkova, E.V. Levin, Dmitry Alexeev
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0110880

Linking Environmental Forcing and Trophic Supply to Benthic Communities in the Vercelli Seamount Area (Tyrrhenian Sea)
Cited by: 3
Author(s): Anabella Covazzi Harriague, Giorgio Bavestrello, Marzia Bo, Mireno Borghini, Michela Castellano, Margherita Majorana, Francesco Massa, Alessandro Montella, Paolo Pedrini, Cristina Misic
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0160678

Limited Genetic Connectivity between Gorgonian Morphotypes along a Depth Gradient
Cited by: 35
Author(s): Federica Costantini, Andrea Gori, Pablo J. López‐González, Lorenzo Bramanti, Sergio Rossi, Josep-Marı́a Gili, Marco Abbiati
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0063505

Fish Assemblages on Estuarine Artificial Reefs: Natural Rocky-Reef Mimics or Discrete Assemblages?
Cited by: 67
Author(s): Heath Folpp, Michael B. Lowry, Marcus Gregson, Iain M. Suthers
Software Mentions: 1
Published: about 13 years ago

10.1186/s12917-021-02972-0

Spatiotemporal variation in the fecal microbiota of mule deer is associated with proximate and future measures of host health
Cited by: 1
Author(s): Hyrum S. Eddington, Courtney Carroll, Randy T. Larsen, Brock R. McMillan, John M. Chaston
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2018.00833

Coral Bacterial-Core Abundance and Network Complexity as Proxies for Anthropogenic Pollution
Cited by: 46
Author(s): D. L. Leite, Joana Falcão Salles, Emiliano Nicolas Calderón, Clovis B. Castro, Adalto Bianchini, Joseane Aparecida Marques, Jan Dirk van Elsas, Raquel S. Peixoto
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.01697

Schizasterid Heart Urchins Host Microorganisms in a Digestive Symbiosis of Mesozoic Origin
Cited by: 4
Author(s): Alexander Ziegler, Ariel M Gilligan, Jesse G. Dillon, Bruno Pernet
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0234005

Assessment of bacterial diversity of Rhipicephalus microplus ticks from two livestock agroecosystems in Antioquia, Colombia
Cited by: 15
Author(s): Juan Segura, Juan Pablo Isaza, Luz Elena Botero, Juan F. Alzate, Luis Felipe Higuita Gutiérrez
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0144051

Spatial and Dietary Overlap Creates Potential for Competition between Red Snapper (Lutjanus campechanus) and Vermilion snapper (Rhomboplites aurorubens)
Cited by: 12
Author(s): William T. Davis, J. Marcus Drymon, Sean P. Powers
Software Mentions: 1
Published: over 10 years ago

10.1186/s12917-020-02477-2

The gut bacterial diversity of sheep associated with different breeds in Qinghai province
Cited by: 20
Author(s): Jianjun Chang, Xiaoting Yao, Chenxiang Zuo, Yuxu Qi, Dekun Chen, Wentao Ma
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0215262

The human microbiota is associated with cardiometabolic risk across the epidemiologic transition
Cited by: 27
Author(s): Na Fei, Beatriz Peñalver Bernabé, Louise Lie, Danny Baghdan, Kweku Bedu-Addo, Jacob Plange‐Rhule, Terrence Forrester, Estelle V. Lambert, Pascal Bovet, Neil Gottel, Walter Riesen, Wolfgang Korte, Amy Luke, Stephanie Kliethermes, Brian T. Layden, Jack A. Gilbert, Lara R. Dugas
Software Mentions: 1
Published: about 7 years ago

10.1186/s42523-019-0011-5

Similar bacterial communities on healthy and injured skin of black tip reef sharks
Cited by: 20
Author(s): Claudia Pogoreutz, Mauvis A. Gore, Gabriela Perna, Catriona Millar, Robert Nestler, Rupert Ormond, Christopher R. Clarke, Christian R. Voolstra
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0255083

Bacterial diversity dynamics in microbial consortia selected for lignin utilization
Cited by: 9
Author(s): Isis Viana Mendes, Mariana Botelho Garcia, Ana Carolina Araújo Bitencourt, Renata Henrique Santana, Philippe de Castro Lins, Rafaella Silveira, Blake A. Simmons, John M. Gladden, Ricardo Henrique Krüger, Betânia Ferraz Quirino
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12917-020-02437-w

Saccharomyces cerevisiae fermentation products (SCFP) stabilize the ruminal microbiota of lactating dairy cows during periods of a depressed rumen pH
Cited by: 19
Author(s): Hein Min Tun, Shucong Li, I. Yoon, S. J. Meale, Paula Azevedo, Ehsan Khafipour, J.C. Plaizier
Software Mentions: 1
Published: about 6 years ago

10.1186/s42523-019-0002-6

Distinct microbiotas of anatomical gut regions display idiosyncratic seasonal variation in an avian folivore
Cited by: 19
Author(s): Sergei V. Drovetski, Michael O’Mahoney, Kenan O. Matterson, Brian K. Schmidt, Gary R. Graves
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.592539

Comparative Analysis of the Gut Microbial Communities of the Eurasian Kestrel (Falco tinnunculus) at Different Developmental Stages
Cited by: 12
Author(s): Lei Zhou, Xiaona Huo, Boyu Liu, Hui Wu, Feng Jiang
Software Mentions: 1
Published: over 5 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292