cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2021.657754

Venomous Snakes Reveal Ecological and Phylogenetic Factors Influencing Variation in Gut and Oral Microbiomes
Cited by: 11
Author(s): Sierra N. Smith, Timothy J. Colston, Cameron D. Siler
Software Mentions: 1
Published: over 5 years ago

10.3389/fnut.2019.00120

Early-Life Iron Deficiency and Subsequent Repletion Alters Development of the Colonic Microbiota in the Pig
Cited by: 14
Author(s): Laura C. Knight, Mei Wang, Sharon M. Donovan, Ryan N. Dilger
Software Mentions: 1
Published: about 7 years ago

10.3389/fnut.2021.705763

Probiotic Effects of Lactobacillus fermentum ZJUIDS06 and Lactobacillus plantarum ZY08 on Hypercholesteremic Golden Hamsters
Cited by: 22
Author(s): Dongting Yang, Wentao Lyu, Zhengqiang Hu, Jiting Gao, Zhiyao Zheng, Weijun Wang, Jenni Firrman, Dawei Ren
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.722626

Fungi-Bacteria Associations in Wilt Diseased Rhizosphere and Endosphere by Interdomain Ecological Network Analysis
Cited by: 14
Author(s): Lin Tan, Weiai Zeng, Yansong Xiao, Pengfei Li, Shuhang Gu, Shaolong Wu, Zhengguang Zhai, Kai Feng, Ye Deng, Qiulong Hu
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.00808

Is It First the Egg or the Shrimp? – Diversity and Variation in Microbial Communities Colonizing Broods of the Vent Shrimp Rimicaris exoculata During Embryonic Development
Cited by: 19
Author(s): Pierre Methou, Iván Hernández-Ávila, Johanne Aubé, Valérie Cueff-Gauchard, Nicolas Gayet, Louis Amand, Bruce Shillito, Florence Pradillon, Marie-Anne Cambon-Bonavita
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.01894

NifH-Harboring Bacterial Community Composition across an Alaskan Permafrost Thaw Gradient
Cited by: 31
Author(s): C. Ryan Penton, Caiyun Yang, Liyou Wu, Qiong Wang, Jin Zhang, Feifei Liu, Yujia Qin, Ye Deng, Christopher L. Hemme, Tao Zheng, Edward A. G. Schuur, James M. Tiedje, Jizhong Zhou
Software Mentions: 1
Published: almost 10 years ago

10.3389/fonc.2021.614448

Dysbiosis of Oral Microbiota During Oral Squamous Cell Carcinoma Development
Cited by: 43
Author(s): Purandar Sarkar, Samaresh Malik, Sayantan Laha, Shantanab Das, Soumya Bunk, Jharna Ray, Raghunath Chatterjee, Abhik Saha
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.01803

The Association Between Inflammaging and Age-Related Changes in the Ruminal and Fecal Microbiota Among Lactating Holstein Cows
Cited by: 16
Author(s): Guoxing Zhang, Yachun Wang, Hanpeng Luo, Qiu Wan-hua, Hai-Liang Zhang, Lirong Hu, Yajing Wang, Ganghui Dong, Gang Guo
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2019.00413

Distributions of Extracellular Peptidases Across Prokaryotic Genomes Reflect Phylogeny and Habitat
Cited by: 47
Author(s): Trang T. H. Nguyen, David D. Myrold, Robert F. Mueller
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2019.00054

High-Level PM2.5/PM10 Exposure Is Associated With Alterations in the Human Pharyngeal Microbiota Composition
Cited by: 31
Author(s): Tian Qin, Furong Zhang, Haijian Zhou, Hao Ren, Yijun Du, Shengnan Liang, Fei Wang, Lihong Cheng, Xuguang Xie, Aoming Jin, Yangfeng Wu, Jinxing Zhao, Jianguo Xu
Software Mentions: 1
Published: over 7 years ago

10.3389/fphar.2019.01684

Alpha-Glucosidase Inhibitors Alter Gut Microbiota and Ameliorate Collagen-Induced Arthritis
Cited by: 22
Author(s): Lingshu Zhang, Pingfang Song, Xiaowei Zhang, Christina Metea, Matthew Schleisman, Lisa Karstens, Eric T. Leung, Jun Zhang, Qiang Xu, Yi Liu, Mark Asquith, Cong Qiu Chu
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.00015

Distribution of Archaeal Communities along the Coast of the Gulf of Finland and Their Response to Oil Contamination
Cited by: 25
Author(s): Lijuan Yan, Dan Yu, Nan Hui, Eve Naanuri, Signe Viggor, А. Б. Гафаров, С. Л. Соколов, Ain Heinaru, Martin Romantschuk
Software Mentions: 1
Published: almost 9 years ago

10.3389/fphar.2021.665881

Anti-Obesity Effect of Fermented Panax notoginseng Is Mediated Via Modulation of Appetite and Gut Microbial Population
Cited by: 5
Author(s): Na Rae Shin, Shambhunath Bose, Yura Choi, Youngmi Kim, Young‐Won Chin, Eun-Ji Song, Young-Do Nam, Hojun Kim
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.3080

Are floating algal mats a refuge from hypoxia for estuarine invertebrates?
Cited by: 12
Author(s): Michael R.S. Coffin, Kyle M. Knysh, Emma F. Theriault, Christina C. Pater, Simon C. Courtenay, Michael R. van den Heuvel
Software Mentions: 1
Published: over 9 years ago

10.3389/fphar.2020.569402

The Effects of Gum Acacia on the Composition of the Gut Microbiome and Plasma Levels of Short-Chain Fatty Acids in a Rat Model of Chronic Kidney Disease
Cited by: 14
Author(s): Maha Al-Asmakh, Muhammad Sohail, Ola Al-Jamal, Banan Mosaad Shoair, Asmaa Yousef Al-Baniali, Salma Bouabidi, Shahd Nasr, Hiba Bawadi
Software Mentions: 1
Published: almost 6 years ago

10.7717/peerj.4194

Crustacean amphipods from marsh ponds: a nutritious feed resource with potential for application in Integrated Multi-Trophic Aquaculture
Cited by: 21
Author(s): Pablo Jiménez‐Prada, Ismael Hachero‐Cruzado, Inmaculada Giráldez, Catalina Fernández‐Díaz, César Vílas, José Pedro Cañavate, José M. Guerra-García
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2017.00175

Diversity and Distribution of Freshwater Aerobic Anoxygenic Phototrophic Bacteria across a Wide Latitudinal Gradient
Cited by: 25
Author(s): Isabel Ferrera, Hugo Sarmento, John C. Priscu, Amy Chiuchiolo, José M. González, Hans‐Peter Grossart
Software Mentions: 1
Published: over 9 years ago

10.3389/fphar.2020.00833

Integrated Metagenomic and Metabolomic Analyses of the Effect of Astragalus Polysaccharides on Alleviating High-Fat Diet–Induced Metabolic Disorders
Cited by: 47
Author(s): Ying Hong, Bingbing Li, Ningning Zheng, Gaosong Wu, Junli Ma, Xin Tao, Linlin Chen, Jing Zhong, Lili Sheng, Houkai Li
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.01403

Repeated Inoculation of Young Calves With Rumen Microbiota Does Not Significantly Modulate the Rumen Prokaryotic Microbiota Consistently but Decreases Diarrhea
Cited by: 18
Author(s): Dengpan Bu, Xin Zhang, Lu Ma, Tansol Park, Lingling Wang, Mengzhi Wang, Jianchu Xu, Zhongtang Yu
Software Mentions: 1
Published: over 6 years ago

10.3389/fphys.2021.663950

Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome
Cited by: 20
Author(s): Jin Xue, Celeste Allaband, Dan Zhou, Orit Poulsen, Cameron Martino, Lingjing Jiang, Anupriya Tripathi, Emmanuel O. Elijah, Pieter C. Dorrestein, Rob Knight, Amir Zarrinpar, Gabriel G. Haddad
Software Mentions: 1
Published: over 5 years ago

10.3389/fphys.2017.00362

You Are What You Eat: A Genomic Analysis of the Gut Microbiome of Captive and Wild Octopus vulgaris Paralarvae and Their Zooplankton Prey
Cited by: 24
Author(s): Álvaro Roura, Stephen R. Doyle, Manuel Nande, Jan M. Strugnell
Software Mentions: 1
Published: over 9 years ago

10.3389/fphys.2020.607369

Slight Disruption in Intestinal Environment by Dextran Sodium Sulfate Reduces Egg Yolk Size Through Disfunction of Ovarian Follicle Growth
Cited by: 4
Author(s): Takahiro Nii, Takashi Bungo, Naoki Isobe, Y. Yoshimura
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.03062

The Preliminary Development of an in vitro Poultry Cecal Culture Model to Evaluate the Effects of Original XPCTM for the Reduction of Campylobacter jejuni and Its Potential Effects on the Microbiota
Cited by: 14
Author(s): Kristina M. Feye, Peter M. Rubinelli, W. Evan Chaney, Hilary O. Pavlidis, Michael H. Kogut, Steven C. Ricke
Software Mentions: 1
Published: almost 7 years ago

10.3389/fphys.2020.00022

Changes in Biochemical Composition and Energy Reserves Associated With Sexual Maturation of Octopus maya
Cited by: 7
Author(s): Cristina Pascual, Honorio Cruz-López, Maité Mascaró, Pedro Gallardo, Ariadna Sánchez, Pedro Domíngues, Carlos Rosas
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.629852

Exploration of Intrinsic Microbial Community Modulators in the Rice Endosphere Indicates a Key Role of Distinct Bacterial Taxa Across Different Cultivars
Cited by: 7
Author(s): Pei Wang, Xiao Kong, Hongsong Chen, Yutao Xiao, Huijun Liu, Xiaojuan Li, Zhuo Zhang, Xinqiu Tan, Diandong Wang, Decai Jin, Ye Deng, Tomislav Cernava
Software Mentions: 1
Published: over 5 years ago

10.1128/mSystems.00107-20

Correlations between the Composition of the Bovine Microbiota and Vitamin B 12 Abundance
Cited by: 24
Author(s): Julian Franco-Lopez, M. Duplessis, An Tran Hoang Bui, Coralie Reymond, William Poisson, Lya Blais, Jasmine Chong, R. Gervais, Daniel Rico, R.I. Cue, C.L. Girard, Jennifer Ronholm
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.661515

Effects of Field Fumigation and Inoculation With the Pecan Truffle (Tuber lyonii) on the Fungal Community of Pecan (Carya illinoinensis) Seedlings Over 5 Years
Cited by: 3
Author(s): Arthur C. Grupe, Michelle A. Jusino, Alija B. Mujic, Brantlee Spakes Richter, Gregory Bonito, T. B. Brenneman, Matthew Smith
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.4521

The effect of tides on nearshore environmental DNA
Cited by: 74
Author(s): Ryan P. Kelly, Ramón Gallego, Emily Jacobs-Palmer
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2016.01446

Mineral vs. Organic Amendments: Microbial Community Structure, Activity and Abundance of Agriculturally Relevant Microbes Are Driven by Long-Term Fertilization Strategies
Cited by: 394
Author(s): Davide Francioli, Elke Schulz, Guillaume Lentendu, Tesfaye Wubet, François Buscot, Thomas Reitz
Software Mentions: 1
Published: about 10 years ago

10.3389/fphys.2020.532271

Systems View of Deconditioning During Spaceflight Simulation in the PlanHab Project: The Departure of Urine 1 H-NMR Metabolomes From Healthy State in Young Males Subjected to Bedrest Inactivity and Hypoxia
Cited by: 9
Author(s): Robert Šket, Leon Deutsch, Zala Prevoršek, Igor B. Mekjavić, Janez Plavec, Jörn Rittweger, Tadej Debevec, Ola Eiken, Blaž Stres
Software Mentions: 1
Published: almost 6 years ago

10.3389/fphys.2019.01015

Alterations of Gut Microbiota and Blood Lipidome in Gestational Diabetes Mellitus With Hyperlipidemia
Cited by: 59
Author(s): He Liu, Li-Long Pan, Siting Lv, Qin Yang, Hao Zhang, Wei Chen, Zhuwu Lv, Jia Sun
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2017.01127

Temporal Dynamics of Soil Microbial Communities below the Seedbed under Two Contrasting Tillage Regimes
Cited by: 100
Author(s): Florine Degrune, Nicolas Theodorakopoulos, Gilles Colinet, Marie-Pierre Hiel, Bernard Bodson, Bernard Taminiau, Georges Daube, Micheline Vandenbol, Martin Hartmann
Software Mentions: 1
Published: over 9 years ago

10.3389/fphys.2017.00467

Feeding Relationship between Octopus vulgaris (Cuvier, 1797) Early Life-Cycle Stages and Their Prey in the Western Iberian Upwelling System: Correlation of Reciprocal Lipid and Fatty Acid Contents
Cited by: 15
Author(s): Sílvia Lourenço, Álvaro Roura, María José Fernández‐Reiriz, Luı́s Narciso, Ángel F. González
Software Mentions: 1
Published: over 9 years ago

10.3389/fphys.2019.01446

Impact of Ocean Acidification on the Intestinal Microbiota of the Marine Sea Bream (Sparus aurata L.)
Cited by: 18
Author(s): Filomena Fonseca, Ricardo Cerqueira, Juan Fuentes
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2017.00350

An Endohyphal Bacterium (Chitinophaga, Bacteroidetes) Alters Carbon Source Use by Fusarium keratoplasticum (F. solani Species Complex, Nectriaceae)
Cited by: 58
Author(s): Justin P. Shaffer, Jana M. U’Ren, Rachel E. Gallery, David A. Baltrus, A. Elizabeth Arnold
Software Mentions: 1
Published: over 9 years ago

10.3389/fpls.2021.650296

Long-Term Lime and Phosphogypsum Amended-Soils Alleviates the Field Drought Effects on Carbon and Antioxidative Metabolism of Maize by Improving Soil Fertility and Root Growth
Cited by: 10
Author(s): João William Bossolani, Carlos Alexandre Costa Crusciol, Ariani Garcia, Luiz Gustavo Moretti, José Roberto Portugal, Vitor Alves Rodrigues, Mariley de Cássia da Fonseca, Juliano Carlos Calonego, Eduardo Fávero Caires, Telmo Jorge Carneiro Amado, André Rodrigues dos Reis
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.11522

Freshwater-adapted sea bass Dicentrarchus labrax feeding frequency impact in a lettuce Lactuca sativa aquaponics system
Cited by: 5
Author(s): Paraskevi Stathopoulou, Panagiotis Berillis, Nikolaos Vlahos, Eleni Nikouli, Konstantinos Ar. Kormas, Efi Levizou, Ν. Katsoulas, Eleni Mente
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2016.00171

Characterization of the Core and Caste-Specific Microbiota in the Termite, Reticulitermes flavipes
Cited by: 56
Author(s): Jacquelynn Benjamino, Joerg Graf
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2021.570908

Nitrogen Deposition Reduces the Diversity and Abundance of cbbL Gene-Containing CO2-Fixing Microorganisms in the Soil of the Stipa baicalensis Steppe
Cited by: 10
Author(s): Jie Qin, Ming Li, Haifang Zhang, Hongmei Liu, Junjie Zhao, Yang Dian-lin
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2020.00599

Drought Drives Spatial Variation in the Millet Root Microbiome
Cited by: 33
Author(s): Tuesday Simmons, Alexander Styer, Grady Pierroz, A. Pedro Gonçalves, Ramji Pasricha, Amrita B. Hazra, Patricia Bubner, Devin Coleman‐Derr
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2018.00858

Relating Bryophyte Assemblages to a Remotely Sensed Depth-to-Water Index in Boreal Forests
Cited by: 21
Author(s): Samuel F. Bartels, Richard T. Caners, Jae Ogilvie, Barry White, S. Ellen Macdonald
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2021.680981

Genomic Diversity of Pigeon Pea (Cajanus cajan L. Millsp.) Endosymbionts in India and Selection of Potential Strains for Use as Agricultural Inoculants
Cited by: 11
Author(s): Beatriz Jorrín, Marta Maluk, Nagvanti Atoliya, Shiv Charan Kumar, Danteswari Chalasani, Andrzej Tkacz, Prachi Singh, Anirban Basu, Sarma V. S. R. N. Pullabhotla, Murugan Kumar, Santosh Ranjan Mohanty, Alison K. East, Vinoy K. Ramachandran, Euan K. James, Appa Rao Podile, Anil Kumar Saxena, D. L. N. Rao, Philip S. Poole
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.2656

Foliar fungal communities strongly differ between habitat patches in a landscape mosaic
Cited by: 27
Author(s): Thomas Fort, Cécile Robin, Xavier Capdevielle, Laurent Delière, Corinne Vacher
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2018.01400

Diversity of Fungal Communities in Heshang Cave of Central China Revealed by Mycobiome-Sequencing
Cited by: 20
Author(s): Baiying Man, Hongmei Wang, Yuan Yun, Xiang Xiao, Ruicheng Wang, Yonggang Duan, Xiaoyu Cheng
Software Mentions: 1
Published: over 8 years ago

10.7717/peerj.2052

Response of marine copepods to a changing tropical environment: winners, losers and implications
Cited by: 17
Author(s): Li Lee Chew, Ving Ching Chong
Software Mentions: 1
Published: over 10 years ago

10.3389/fpls.2019.00149

A Phytogeographic Divide Along the 500 mm Isohyet in the Qinghai-Tibet Plateau: Insights From the Phylogeographic Evidence of Chinese Alliums (Amaryllidaceae)
Cited by: 5
Author(s): Minjie Li, Deng-Feng Xie, Chuan Xie, Yuqing Deng, Yuan Zhong, Yan Yu, Xing‐Jin He
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2019.00337

Species-Specific Outcome in the Competition for Nitrogen Between Invasive and Native Tree Seedlings
Cited by: 11
Author(s): Andrea Bueno, Karin Pritsch, Judy Simon
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2015.01130

VarR controls colonization and virulence in the marine macroalgal pathogen Nautella italica R11
Cited by: 17
Author(s): Melissa Gardiner, Neil D. Fernandes, Dennis Nowakowski, Mark J. Raftery, Staffan Kjelleberg, Ling Zhong, Torsten Thomas, Suhelen Egan
Software Mentions: 1
Published: about 11 years ago

10.3390/microorganisms9030501

Bacterial Communities and Enzymatic Activities in Sediments of Long-Term Fish and Crab Aquaculture Ponds
Cited by: 13
Author(s): Zhimin Zhang, Qinghui Deng, Lingling Wan, Xiuyun Cao, Yiyong Zhou, Changchun Song
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.6445

Fine-scale substrate heterogeneity does not affect arthropod communities on green roofs
Cited by: 3
Author(s): Bracha Y. Schindler, Amiel Vasl, Leon Blaustein, David Gurevich, Gyongyver J. Kadas, Merav Seifan
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2019.02262

Similar Shift Patterns in Gut Bacterial and Fungal Communities Across the Life Stages of Bactrocera minax Larvae From Two Field Populations
Cited by: 26
Author(s): Zhichao Yao, Qiongke Ma, Zhaohui Cai, Muhammad Fahim Raza, Shuai Bai, Yichen Wang, Ping Zhang, Hua Ma, Hongyu Zhang
Software Mentions: 1
Published: about 7 years ago

10.3389/fpls.2017.01288

Pearl Millet Genetic Traits Shape Rhizobacterial Diversity and Modulate Rhizosphere Aggregation
Cited by: 21
Author(s): Papa Mamadou Sitor Ndour, Mame Codou Guèye, Mohamed Barakat, Philippe Ortet, Marie Bertrand-Huleux, Anne-Laure Pablo, Damien Dezette, Lydie Chapuis‐Lardy, Komi Assigbetsé, Ndjido Ardo Kane, Yves Vigouroux, Wafa Achouak, Ibrahima Ndoye, Thierry Heulin, Laurent Cournac
Software Mentions: 1
Published: about 9 years ago

10.3389/fpls.2019.01026

Distinct Morphological, Physiological, and Biochemical Responses to Light Quality in Barley Leaves and Roots
Cited by: 45
Author(s): Karel Klem, Albert Gargallo‐Garriga, Wutthida Rattanapichai, Michal Oravec, Petr Holub, Barbora Veselá, Jordi Sardans, Josep Peñuelas, Otmar Urban
Software Mentions: 1
Published: about 7 years ago

10.3389/fpls.2020.550169

Plant-Dependent Soil Bacterial Responses Following Amendment With a Multispecies Microbial Biostimulant Compared to Rock Mineral and Chemical Fertilizers
Cited by: 9
Author(s): Bede S. Mickan, Ahmed R. Alsharmani, Zakaria M. Solaiman, Matthias Leopold, Lynette Abbott
Software Mentions: 1
Published: over 5 years ago

10.3389/fmed.2021.655474

Gut Microbiota and Related Electronic Multisensorial System Changes in Subjects With Symptomatic Uncomplicated Diverticular Disease Undergoing Rifaximin Therapy
Cited by: 6
Author(s): Antonio De Vincentis, Marco Santonico, Federica Del Chierico, Annamaria Altomare, Benedetta Marigliano, Alice Laudisio, Sofia Reddel, Simone Grasso, Alessandro Zompanti, Giorgio Pennazza, Lorenza Putignani, Michele Pier Luca Guarino, Michele Cicala, Raffaele Antonelli Incalzi
Software Mentions: 1
Published: over 5 years ago

10.3389/fmed.2021.637246

Compare the Effect of Inhaled Corticosteroids and Systemic Corticosteroids on Sputum Microbiome of AECOPD
Cited by: 4
Author(s): Nan Ma, Yu-Jing Qi, Xiaona Liang, Jing Bai, Jingmin Deng, Meihua Li, He Zhou
Software Mentions: 1
Published: over 5 years ago

10.3389/fmars.2020.566663

Energy Sources of the Depth-Generalist Mixotrophic Coral Stylophora pistillata
Cited by: 27
Author(s): Stephane Martinez, Yehoshua Kolodny, Eli Shemesh, Federica Scucchia, Reinat Nevo, Smadar Levin-Zaidman, Yossi Paltiel, Nir Keren, Dan Tchernov, Tali Mass
Software Mentions: 1
Published: almost 6 years ago

10.3389/fnint.2021.719076

A Multivariate Assessment of Age-Related Cognitive Impairment in Octodon degus
Cited by: 7
Author(s): Daniela Rivera, Carolina B. Lindsay, Carolina A. Oliva, Francisco Bozinovic, Nibaldo C. Inestrosa
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.8227

Testing marine regional-scale hypotheses along the Yucatan continental shelf using soft-bottom macrofauna
Cited by: 10
Author(s): Iván Hernández-Ávila, Frank A. Ocaña, Daniel Pech
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2017.02019

Community Profiling of Fusarium in Combination with Other Plant-Associated Fungi in Different Crop Species Using SMRT Sequencing
Cited by: 42
Author(s): Florian Walder, Klaus Schlaeppi, Raphaël Wittwer, Alain Held, Susanne Vogelgsang, Marcel G. A. van der Heijden
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2020.560869

Understanding the Impact of Cultivar, Seed Origin, and Substrate on Bacterial Diversity of the Sugar Beet Rhizosphere and Suppression of Soil-Borne Pathogens
Cited by: 24
Author(s): Adrian Wolfgang, Christin Zachow, Henry Müller, Alfred Grand, Nora Temme, Ralf Tilcher, Gabriele Berg
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2021.700570

Adalimumab Therapy Restores the Gut Microbiota in Patients With Ankylosing Spondylitis
Cited by: 14
Author(s): Zena Chen, Xuqi Zheng, Xinyu Wu, Jialing Wu, Xiaomin Li, Qiujing Wei, Xi Zhang, Lin Fang, Ou Jin, Gu J
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2020.01654

Altered Microbiota, Impaired Quality of Life, Malabsorption, Infection, and Inflammation in CVID Patients With Diarrhoea
Cited by: 17
Author(s): Cornelia M. van Schewick, Christina Nöltner, Svenja Abel, Siobhan O. Burns, Sarita Workman, Andrew Symes, David Sánchez-Migallón Guzman, Michele Proietti, Alla Bulashevska, Fernando Moreira, Veronika Soetedjo, David M. Lowe, Bodo Grimbacher
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2020.00468

Fungal Dysbiosis and Intestinal Inflammation in Children With Beta-Cell Autoimmunity
Cited by: 31
Author(s): Jarno Honkanen, Arja Vuorela, Daniel Muthas, L. Orivuori, Kristiina Luopajärvi, Mysore V. Tejesvi, Anton Lavrinienko, Anna Maria Pirttilä, Christopher L. Fogarty, Taina Härkönen, Jorma Ilonen, Terhi Ruohtula, Mikael Knip, Janne J. Koskimäki, Outi Vaarala
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2020.590968

Phytonutritional Content and Aroma Profile Changes During Postharvest Storage of Edible Flowers
Cited by: 9
Author(s): Ilaria Marchioni, Laura Pistelli, Benedetta Ferri, Andrea Copetta, B. Ruffoni, Luisa Pistelli, Basma Najar
Software Mentions: 1
Published: almost 6 years ago

10.7717/peerj.8705

Alternative dietary protein and water temperature influence the skin and gut microbial communities of yellowtail kingfish (Seriola lalandi)
Cited by: 19
Author(s): Jack Horlick, Mark A. Booth, Sasha G. Tetu
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2017.00132

Community Structure, Species Variation, and Potential Functions of Rhizosphere-Associated Bacteria of Different Winter Wheat (Triticum aestivum) Cultivars
Cited by: 111
Author(s): Aaron K. Mahoney, Chuntao Yin, Scot H. Hulbert
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.9058

Meiofaunal communities and nematode diversity characterizing the Secca delle Fumose shallow vent area (Gulf of Naples, Italy)
Cited by: 10
Author(s): Elisa Baldrighi, Daniela Zeppilli, Luca Appolloni, Luigia Donnarumma, Elena Chianese, Gìovanni Fulvio Russo, Roberto Sandulli
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2020.00561

Tissue-Specific Dynamics in the Endophytic Bacterial Communities in Arctic Pioneer Plant Oxyria digyna
Cited by: 9
Author(s): Cindy Given, Elina Häikiö, Manoj Kumar, Riitta Nissinen
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2019.00666

Oral Administration of Compound Probiotics Improved Canine Feed Intake, Weight Gain, Immunity and Intestinal Microbiota
Cited by: 50
Author(s): Haiyan Xu, Weiqiang Huang, Qiangchuan Hou, Lai‐Yu Kwok, Wuri Laga, Yanjie Wang, Hongbing Ma, Zhihong Sun, Heping Zhang
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2020.01703

Microbiome and Metabolome Analyses Reveal the Disruption of Lipid Metabolism in Systemic Lupus Erythematosus
Cited by: 51
Author(s): Jingquan He, Tianlong Chan, Xiaoping Hong, Fengping Zheng, Chaowei Zhu, Yin Li, Weier Dai, Donge Tang, Dongzhou Liu, Yong Dai
Software Mentions: 1
Published: about 6 years ago

10.1128/mSystems.00149-20

Strain-Level Diversity Impacts Cheese Rind Microbiome Assembly and Function
Cited by: 41
Author(s): Brittany A. Niccum, Erik K. Kastman, Nicole Kfoury, Albert Robbat, Benjamin E. Wolfe
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2021.642027

Microbiome-Assisted Breeding to Understand Cultivar-Dependent Assembly in Cucurbita pepo
Cited by: 18
Author(s): Peter Kusstatscher, Eveline Adam, Wisnu Adi Wicaksono, Maria Bernhart, Expedito Olimi, Henry Müller, Gabriele Berg
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2016.00212

Suitability of Phytosterols Alongside Fatty Acids as Chemotaxonomic Biomarkers for Phytoplankton
Cited by: 71
Author(s): Sami J. Taipale, Minna Hiltunen, Kristiina Vuorio, Elina Peltomaa
Software Mentions: 1
Published: over 10 years ago

10.3389/fimmu.2020.607609

Neonatal Diet Impacts the Large Intestine Luminal Metabolome at Weaning and Post-Weaning in Piglets Fed Formula or Human Milk
Cited by: 5
Author(s): Fernanda Rosa, Katelin S. Matazel, Anne K. Bowlin, Keith D. Williams, Ahmed A. Elolimy, Sean H. Adams, Lars Bode, Laxmi Yeruva
Software Mentions: 1
Published: almost 6 years ago

10.7717/peerj.1747

Microphytoplankton variations during coral spawning at Los Roques, Southern Caribbean
Cited by: 1
Author(s): Francoise Cavada-Blanco, Ainhoa L. Zubillaga, Carolina Bastidas
Software Mentions: 1
Published: over 10 years ago

10.3389/fimmu.2021.713485

Glycerol Monolaurate Ameliorated Intestinal Barrier and Immunity in Broilers by Regulating Intestinal Inflammation, Antioxidant Balance, and Intestinal Microbiota
Cited by: 19
Author(s): Linglian Kong, Zhenhua Wang, Chuanpi Xiao, Qidong Zhu, Zhigang Song
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2020.607754

Gut–Liver Immune Response and Gut Microbiota Profiling Reveal the Pathogenic Mechanisms of Vibrio harveyi in Pearl Gentian Grouper (Epinephelus lanceolatus♂ × E. fuscoguttatus♀)
Cited by: 31
Author(s): Yiqin Deng, Yaqiu Zhang, Haoxiang Chen, Li‐Wen Xu, Qian Wang, Feng Jiang
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2018.01072

Nocturnal Bee Pollinators Are Attracted to Guarana Flowers by Their Scents
Cited by: 28
Author(s): C. A. Krug, Guaraci Duran Cordeiro, Irmgard Schäffler, Cláudia Inês da Silva, Reisla Oliveira, Clemens Schlindwein, Stefan Dötterl, Isabel Alves-dos-Santos
Software Mentions: 1
Published: about 8 years ago

10.3389/fpls.2021.719436

Responses of Root Endophytes to Phosphorus Availability in Peach Rootstocks With Contrasting Phosphorus-Use Efficiencies
Cited by: 0
Author(s): Yu Zhang, Xin Liu, Jiying Guo, Jianbo Zhao, Wang ShangDe, Zheng Zhi-qin, Quan Jiang, Fei Ren
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.10602

Effects of oxygen exposure on relative nucleic acid content and membrane integrity in the human gut microbiota
Cited by: 3
Author(s): Mariia Taguer, Ophélie Quillier, Corinne F. Maurice
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2020.00200

Murine Gut Microbiome Association With APOE Alleles
Cited by: 34
Author(s): Ishita Parikh, Janice L. Estus, Diana J. Zajac, Manasi Malik, Juan Maldonado Weng, Leon M. Tai, George E. Chlipala, Mary Jo LaDu, Stefan J. Green, Steven Estus
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2019.01556

Differential Leaf Age-Dependent Thermal Plasticity in the Keystone Seagrass Posidonia oceanica
Cited by: 24
Author(s): Miriam Ruocco, Pasquale De Luca, Lázaro Marín-Guirao, Gabriele Procaccini
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2016.01463

Association of Increased Grain Iron and Zinc Concentrations with Agro-morphological Traits of Biofortified Rice
Cited by: 25
Author(s): Laura T. Moreno-Moyano, Julien Bonneau, José Tonatiuh Sánchez-Palacios, Joseph M. Tohme, Alexander Johnson
Software Mentions: 1
Published: about 10 years ago

10.3389/fimmu.2021.688886

Preservation of Gastrointestinal Mucosal Barrier Function and Microbiome in Patients With Controlled HIV Infection
Cited by: 6
Author(s): Gerald Mak, John Zaunders, Michelle Bailey, Nabila Seddiki, Geraint B. Rogers, Lex Leong, Tri Giang Phan, Anthony D. Kelleher, Kersten K. Koelsch, Mark Boyd, Mark Danta
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2021.650132

Biopesticide Trunk Injection Into Apple Trees: A Proof of Concept for the Systemic Movement of Mint and Cinnamon Essential Oils
Cited by: 14
Author(s): Pierre-Yves Werrie, Clément Burgeon, Guillaume Jean Le Goff, Thierry Hance, Marie‐Laure Fauconnier
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2020.02101

Intestinal Barrier Breakdown and Mucosal Microbiota Disturbance in Neuromyelitis Optical Spectrum Disorders
Cited by: 12
Author(s): Chun-Ping Chu, Sha Tan, Tao Li, Junli Gong, Yanyu Chang, Yuge Wang, Ping Fan, Dan He, Yiwen Ruan, Wei Qiu
Software Mentions: 1
Published: about 6 years ago

10.3389/fpls.2017.00925

A Global Assessment of the Chemical Recalcitrance of Seagrass Tissues: Implications for Long-Term Carbon Sequestration
Cited by: 58
Author(s): Stacey M. Trevathan-Tackett, Peter I. Macreadie, Jonathan Sanderman, J. A. Baldock, Johanna M. Howes, Peter J. Ralph
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.804

Wild plant species growing closely connected in a subalpine meadow host distinct root-associated bacterial communities
Cited by: 63
Author(s): Kristin Aleklett, Jonathan W. Leff, Noah Fierer, Miranda M. Hart
Software Mentions: 1
Published: over 11 years ago

10.3389/fimmu.2021.669672

Trans Fatty Acid Intake Induces Intestinal Inflammation and Impaired Glucose Tolerance
Cited by: 18
Author(s): Tomio Okamura, Yoshitaka Hashimoto, Susumu Majima, Takafumi Senmaru, Emi Ushigome, Naoko Nakanishi, Mai Asano, Masahiro Yamazaki, Hiroshi Takakuwa, Michiaki Fukui
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.755481

Consumption of Butylated Starch Alleviates the Chronic Restraint Stress-Induced Neurobehavioral and Gut Barrier Deficits Through Reshaping the Gut Microbiota
Cited by: 22
Author(s): Peijun Tian, Huiyue Zhu, Xin Qian, Ying Chen, Zheng Wang, Jianxin Zhao, Hao Zhang, Gang Wang
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2020.599625

Host Defense Effectors Expressed by Hemocytes Shape the Bacterial Microbiota From the Scallop Hemolymph
Cited by: 7
Author(s): Roxana González, Ana Teresa Gonçalves, Rodrigo Rojas, Katherina Brokordt, Rafael Diego Rosa, Paulina Schmitt
Software Mentions: 1
Published: almost 6 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292