cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2017.00176

Broadcast Spawning Coral Mussismilia hispida Can Vertically Transfer its Associated Bacterial Core
Cited by: 61
Author(s): D. L. Leite, Pedro N. Leão, Amana Garrido, Ulysses Lins, Henrique F. Santos, Débora O. Pires, Clovis B. Castro, Jan Dirk van Elsas, Carla Zilberberg, Alexandre Soares Rosado, Raquel S. Peixoto
Software Mentions: 1
Published: over 9 years ago

10.1186/s12916-020-01842-0

Dietary fruit and vegetable intake, gut microbiota, and type 2 diabetes: results from two large human cohort studies
Cited by: 64
Author(s): Zengliang Jiang, Tao Sun, Yan He, Wanglong Gou, Luo-Shi-Yuan Zuo, Yuanqing Fu, Zelei Miao, Menglei Shuai, Fengzhe Xu, Congmei Xiao, Yuhui Liang, Jiali Wang, Yisong Xu, Lipeng Jing, Wenhua Ling, Hongwei Zhou, Yuming Chen, Ju‐Sheng Zheng
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0075079

Strong Stability and Host Specific Bacterial Community in Faeces of Ponies
Cited by: 49
Author(s): Tina Blackmore, Alex Dugdale, Caroline McG. Argo, G. C. Curtis, Eric Pinloche, Pat Harris, Hilary J. Worgan, Susan Elizabeth Girdwood, Kirsty Dougal, C. J. Newbold, Neil McEwan
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0192579

Correction: First evidence of biogenic habitat from tubeworms providing a near-absolute habitat requirement for high-intertidal Ulva macroalgae
Cited by: 0
Author(s): Kiran Liversage
Software Mentions: 1
Published: over 8 years ago

10.3390/ani11092750

Dietary Phospholipids Enhance Growth Performance and Modulate Cold Tolerance in Meagre (Argyrosomus regius) Juveniles
Cited by: 1
Author(s): Ismael Hachero‐Cruzado, Manuel Manchado
Software Mentions: 1
Published: almost 5 years ago

10.3390/ani11051463

Characterization of Microbiome on Feces, Blood and Milk in Dairy Cows with Different Milk Leucocyte Pattern
Cited by: 12
Author(s): Elisa Scarsella, A. Zecconi, Michela Cintio, Bruno Stefanon
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-23032-y

Differences in microbial community structure and nitrogen cycling in natural and drained tropical peatland soils
Cited by: 62
Author(s): Mikk Espenberg, Marika Truu, Ülo Mander, Hiie Nõlvak, Teele Ligi, Kristjan Oopkaup, Martin Maddison, Jaak Truu
Software Mentions: 1
Published: over 8 years ago

10.1128/mSphere.00314-20

Distinct Fecal and Plasma Metabolites in Children with Autism Spectrum Disorders and Their Modulation after Microbiota Transfer Therapy
Cited by: 58
Author(s): Dae Wook Kang, James B. Adams, Troy Vargason, Marina Santiago, Juergen Hahn, Rosa Krajmalnik‐Brown
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.01655

Fecal and Mucosal Microbiota Profiling in Irritable Bowel Syndrome and Inflammatory Bowel Disease
Cited by: 127
Author(s): Alessandra Lo Presti, Francesca Zorzi, Federica Del Chierico, Annamaria Altomare, Silvia Cocca, Alessandra Avola, Fabiola De Biasio, Alessandra Russo, Eleonora Cella, Sofia Reddel, Emma Calabrese, Livia Biancone, Giovanni Monteleone, Michele Cicala, Silvia Angeletti, Massimo Ciccozzi, Lorenza Putignani, Michele Pier Luca Guarino
Software Mentions: 1
Published: about 7 years ago

10.3390/biomedicines9070753

The Gut Microbiota-Immunity Axis in ALS: A Role in Deciphering Disease Heterogeneity?
Cited by: 22
Author(s): Elena Niccolai, Vincenzo Di Pilato, Giulia Nannini, Simone Baldi, Edda Russo, Elisabetta Zucchi, Ilaria Martinelli, Marta Menicatti, Gianluca Bartolucci, Jessica Mandrioli, Amedeo Amedei
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-23261-1

Microbiome-metabolome signatures in mice genetically prone to develop dementia, fed a normal or fatty diet
Cited by: 74
Author(s): Elena Sanguinetti, María Carmen Collado, Vannina G. Marrachelli, Daniel Monleón, Marta Selma‐Royo, Mercedes Pardo-Tendero, Silvia Burchielli, Patricia Iozzo
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-23067-1

Below the Mesophotic
Cited by: 69
Author(s): Carole C. Baldwin, Luke Tornabene, D. Ross Robertson
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0073922

Long-Term Recovery Patterns and Limited Spillover of Large Predatory Fish in a Mediterranean MPA
Cited by: 67
Author(s): Antoni García-Rubies, Bernat Hereu, Míkel Zabala
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0105852

Habitat-Specific Density and Diet of Rapidly Expanding Invasive Red Lionfish, Pterois volitans, Populations in the Northern Gulf of Mexico
Cited by: 86
Author(s): Kristen A. Dahl, William F. Patterson
Software Mentions: 1
Published: about 12 years ago

10.1038/s41598-018-23373-8

Effect of live yeast Saccharomyces cerevisiae (Actisaf Sc 47) supplementation on the performance and hindgut microbiota composition of weanling pigs
Cited by: 38
Author(s): Tadele G. Kiros, Hooman Derakhshani, Eric Pinloche, Romain d'Inca, Jason Marshall, Eric Auclair, Ehsan Khafipour, Andrew Van Kessel
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2018.01631

Fecal Microbiota Transplantation Is Associated With Reduced Morbidity and Mortality in Porcine Circovirus Associated Disease
Cited by: 34
Author(s): Megan C. Niederwerder, Laura A. Constance, Raymond R. R. Rowland, Waseem Abbas, Samodha C. Fernando, M. L. Potter, Maureen A. Sheahan, Thomas E. Burkey, Richard Hesse, Ada G. Cino‐Ozuna
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-23870-w

Dysbiosis of the salivary microbiota in pediatric-onset primary sclerosing cholangitis and its potential as a biomarker
Cited by: 46
Author(s): Kentaro Iwasawa, Wataru Suda, Tomoyuki Tsunoda, Manari Oikawa-Kawamoto, Shuichiro Umetsu, Lena Takayasu, Ayano Inui, Tomoo Fujisawa, Hidetoshi Morita, Tsuyoshi Sogo, Masahira Hattori
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2334-14-526

Bordetella pertussis: an underreported pathogen in pediatric respiratory infections, a prospective cohort study
Cited by: 41
Author(s): G. van den Brink, Jérôme O. Wishaupt, Jacob C. Douma, Nico G. Hartwig, F. G. A. Versteegh
Software Mentions: 1
Published: almost 12 years ago

10.3390/microorganisms9091862

Age and Giardia intestinalis Infection Impact Canine Gut Microbiota
Cited by: 8
Author(s): Anne-Sophie Boucard, Myriam Thomas, Wilfried Lebon, Bruno Polack, Isabelle Florent, Philippe Langella, Luis G. Bermúdez‐Humarán
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.01594

Microbial Communities in a Flow-Through Fish Farm for Lumpfish (Cyclopterus lumpus L.) During Healthy Rearing Conditions
Cited by: 19
Author(s): Irene Roalkvam, Karine Drønen, Helge K. Dahle, Heidrun I. Wergeland
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2018.02897

Comparative Microbiome Signatures and Short-Chain Fatty Acids in Mouse, Rat, Non-human Primate, and Human Feces
Cited by: 155
Author(s): Ravinder Nagpal, Shaohua Wang, Leah C. Solberg Woods, Osborne Seshie, Stephanie T. Chung, Carol A. Shively, Thomas C. Register, Suzanne Craft, Donald A. McClain, Hariom Yadav
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2020.00757

Meal Regularity Plays a Role in Shaping the Saliva Microbiota
Cited by: 5
Author(s): Jannina Viljakainen, Sajan C. Raju, Heli Viljakainen, Rejane Augusta de Oliveira Figueiredo, Eva Roos, Elisabete Weiderpass, Trine B. Rounge
Software Mentions: 1
Published: over 6 years ago

10.1186/s12877-021-02301-y

The PROMOTe study: targeting the gut microbiome with prebiotics to overcome age-related anabolic resistance: protocol for a double-blinded, randomised, placebo-controlled trial
Cited by: 10
Author(s): Mary Ní Lochlainn, Ayrun Nessa, Alyce Sheedy, Rachel Horsfall, María Paz García, Deborah Hart, Gulsah Akdag, Darioush Yarand, Samuel Wadge, Andrei-Florin Baleanu, Kevin Whelan, Claire J. Steves
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0110831

Quantifying Fish Assemblages in Large, Offshore Marine Protected Areas: An Australian Case Study
Cited by: 23
Author(s): Nicole Hill, Neville S. Barrett, Emma Lawrence, J Hulls, Jeffrey M. Dambacher, Scott L. Nichol, Alan Williams, Keith R. Hayes
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0228085

Respiratory dysbiosis and population-wide temporal dynamics in canine chronic bronchitis and non-inflammatory respiratory disease
Cited by: 6
Author(s): Aaron C. Ericsson, Alexa R. Personett, Hansjörg Rindt, Megan Grobman, Carol R. Reinero
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms8091414

Response of Barley Plants to Drought Might Be Associated with the Recruiting of Soil-Borne Endophytes
Cited by: 9
Author(s): Luhua Yang, Peter Schröder, Gisle Vestergaard, Michael Schloter, Viviane Radl
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0137527

Different Oceanographic Regimes in the Vicinity of the Antarctic Peninsula Reflected in Benthic Nematode Communities
Cited by: 16
Author(s): Freija Hauquier, Laura Durán Suja, Julian Gutt, Gritta Veit-Köhler, Ann Vanreusel
Software Mentions: 1
Published: about 11 years ago

10.3390/ani11020577

Expeller-Pressed Canola (Brassica napus) Meal Modulates the Structure and Function of the Cecal Microbiota, and Alters the Metabolome of the Pancreas, Liver, and Breast Muscle of Broiler Chickens
Cited by: 9
Author(s): G. Douglas Inglis, Benjamin D. Wright, Stephanie A. Sheppard, D. Wade Abbott, M. A. Oryschak, Tony Montina
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-25086-4

Assessing the Zoantharian Diversity of the Tropical Eastern Pacific through an Integrative Approach
Cited by: 15
Author(s): Karla B. Jaramillo, Miriam Reverter, Paúl O. Guillén, Grace P. McCormack, Jenny K. Rodríguez, Frédéric Sinniger, Olivier P. Thomas
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.00491

Spatio-Temporal and Cultivar-Dependent Variations in the Cannabis Microbiome
Cited by: 23
Author(s): Dominique Comeau, Amy Novinscak, David L. Joly, Martin Filion
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0134345

Environmental Filtering of Microbial Communities in Agricultural Soil Shifts with Crop Growth
Cited by: 59
Author(s): Sarah K. Hargreaves, Ryan J. Williams, Kirsten Hofmockel
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-018-25414-8

Recruitment Drives Spatial Variation in Recovery Rates of Resilient Coral Reefs
Cited by: 80
Author(s): Sally J. Holbrook, Thomas C. Adam, Peter J. Edmunds, Russell J. Schmitt, Robert C. Carpenter, Andrew J. Brooks, Hunter S. Lenihan, Cheryl J. Briggs
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-019-6175-2

Analysis of the fecal microbiota of fast- and slow-growing rainbow trout (Oncorhynchus mykiss)
Cited by: 37
Author(s): Pratima Chapagain, Brock A. Arivett, Beth M. Cleveland, Donald M. Walker, Mohamed Salem
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2018.00355

Zooplankton From a Reef System Under the Influence of the Amazon River Plume
Cited by: 23
Author(s): Sigrid Neumann‐Leitão, Pedro Augusto Mendes de Castro Melo, Ralf Schwamborn, Xiomara Franchesca García Díaz, Lucas Guedes Pereira Figueirêdo, Andrea P Silva, Renata P. S. Campelo, Mauro de Meló Júnior, Nuno Filipe Alves Correia de Melo, Alejandro Esteweson Santos Faustino da Costa, Moacyr Araújo, Dóris Veleda, Rodrigo L. Moura, Fabiano L. Thompson
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2017.00317

Compositional Stability of the Bacterial Community in a Climate-Sensitive Sub-Arctic Peatland
Cited by: 14
Author(s): James T. Weedon, George A. Kowalchuk, Rien Aerts, Stef Freriks, Wilfred F. M. Röling, Peter M. van Bodegom
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-25989-2

Increasing densities of an invasive polychaete enhance bioturbation with variable effects on solute fluxes
Cited by: 29
Author(s): Lea Kauppi, Guillaume Bernard, Ralf Bastrop, Alf Norkko, Joanna Norkko
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-25745-6

Trophic overlap between expanding and contracting fish predators in a range margin undergoing change
Cited by: 11
Author(s): Mats Westerbom, Antti Lappalainen, Olli Mustonen, Alf Norkko
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.00651

Fungi Originating From Tree Leaves Contribute to Fungal Diversity of Litter in Streams
Cited by: 19
Author(s): Pirjo Koivusaari, Mysore V. Tejesvi, Mikko Tolkkinen, Annamari Markkola, Heikki Mykrä, Anna Maria Pirttilä
Software Mentions: 1
Published: over 7 years ago

10.3390/microorganisms8020220

Effect of Dose and Timing of Burdock (Arctium lappa) Root Intake on Intestinal Microbiota of Mice
Cited by: 15
Author(s): Aya Watanabe, Hiroyuki Sasaki, Hiroki Miyakawa, Yuki Nakayama, Yijin Lyu, Shigenobu Shibata
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-26327-2

Chronic rhinosinusitis with nasal polyps is characterized by dysbacteriosis of the nasal microbiota
Cited by: 61
Author(s): Thanit Chalermwatanachai, Ramiro Vílchez-Vargas, Gabriële Holtappels, Tim Lacoere, Ruy Jáuregui, Frederiek‐Maarten Kerckhof, Dietmar H. Pieper, Tom Van de Wiele, Mario Vaneechoutte, Thibaut Van Zele, Claus Bachert
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2164-15-1133

The genetics of colony form and function in Caribbean Acropora corals
Cited by: 42
Author(s): Elizabeth M. Hemond, Stefan T. Kaluziak, Steven V. Vollmer
Software Mentions: 1
Published: over 12 years ago

10.3390/microorganisms8060954

Combinatorial Effects of Soluble, Insoluble, and Organic Extracts from Jerusalem Artichokes on Gut Microbiota in Mice
Cited by: 6
Author(s): Hiroyuki Sasaki, Yijin Lyu, Yuki Nakayama, Fumiaki Nakamura, Aya Watanabe, Hiroki Miyakawa, Yoichi Nakao, Shigenobu Shibata
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0154270

Experimental Assessment of the Effects of Temperature and Food Availability on Particle Mixing by the Bivalve Abra alba Using New Image Analysis Techniques
Cited by: 13
Author(s): Guillaume Bernard, Jean-Claude Duchêne, Alicia Romero-Ramirez, Pascal Lécroart, Olivier Maire, Aurélie Ciutat, Bruno Deflandre, Antoine Grémare
Software Mentions: 1
Published: over 10 years ago

10.1186/s12864-021-07746-4

Benchmark of 16S rRNA gene amplicon sequencing using Japanese gut microbiome data from the V1–V2 and V3–V4 primer sets
Cited by: 36
Author(s): Shoichiro Kameoka, Daisuke Motooka, Satoshi Watanabe, Rieko Kubo, Nicolas Jung, Yuki Midorikawa, Natsuko O. Shinozaki, Yu Sawai, Aya Takeda, Shota Nakamura
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2018.02396

Protective Effect of Pediococcus pentosaceus LI05 Against Clostridium difficile Infection in a Mouse Model
Cited by: 25
Author(s): Qiaomai Xu, Silan Gu, Yunbo Chen, Jiazheng Quan, Longxian Lv, Runsheng Chen, Beiwen Zheng, Lichen Xu, Lanjuan Li
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2015.01092

The effect of diet and host genotype on ceca microbiota of Japanese quail fed a cholesterol enriched diet
Cited by: 18
Author(s): Shasha Li, Darin C. Bennett, Hein Min Tun, Jieun Kim, Kimberly M. Cheng, Hongfu Zhang, Fung Ping Leung
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2017.01371

Temporal Microbial Community Dynamics in Microbial Electrolysis Cells – Influence of Acetate and Propionate Concentration
Cited by: 23
Author(s): Ananda Rao Hari, Krishnaveni Venkidusamy, Krishna P. Katuri, Samik Bagchi, Pascal E. Saikaly
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0179023

Short-term alteration of biotic and abiotic components of the pelagic system in a shallow bay produced by a strong natural hypoxia event
Cited by: 8
Author(s): Eduardo Hernández‐Miranda, Rodrigo Veas, Valeria Anabalón, Renato A. Quiñones
Software Mentions: 1
Published: about 9 years ago

10.3390/microorganisms9040702

Gut Microbiome of a Multiethnic Community Possessed No Predominant Microbiota
Cited by: 3
Author(s): Wei Wei Thwe Khine, Anna Hui Ting Teo, Lucas Wee Wei Loong, Jarett Jun Hao Tan, Clarabelle Geok Hui Ang, W. F. Ng, Chuen Neng Lee, Congju Zhu, Quek Choon Lau, Yuan‐Kun Lee
Software Mentions: 1
Published: over 5 years ago

10.1186/s13568-021-01233-5

Effect of liquid volume and microflora source on degradation rate and microbial community in corn stover degradation
Cited by: 2
Author(s): Jingjing Wang, Dan Zhu, Siqi Zhao, Sheng Xu, Rong Yang, Wei Zhao, Xiaoxia Zhang, Zhiyong Huang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.00557

Darkening of the Greenland Ice Sheet: Fungal Abundance and Diversity Are Associated With Algal Bloom
Cited by: 49
Author(s): Laura Perini, Cene Gostinčar, Alexandre M. Anesio, Christopher Williamson, Martyn Tranter, Nina Gunde‐Cimerman
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.562560

High-Throughput Sequencing Approach to Analyze the Effect of Aging Time and Barrel Usage on the Microbial Community Composition of Red Wines
Cited by: 7
Author(s): Dimitrios Kioroglou, Albert Mas, María del Carmen Portillo Guisado
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0163374

Influence of Benthic Macrofauna as a Spatial Structuring Agent for Juvenile Haddock (Melanogrammus aeglefinus) on the Eastern Scotian Shelf, Atlantic Canada
Cited by: 4
Author(s): Beatriz Rincón, Ellen Kenchington
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-018-26729-2

The influence of salinity on the effects of Multi-walled carbon nanotubes on polychaetes
Cited by: 12
Author(s): Lucia De Marchi, Victor Neto, Carlo Pretti, Etelvina Figueira, Emo Chiellini, Andrea Morelli, Amadeu M.V.M. Soares, Rosa Freitas
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms9061333

Clary Sage Cultivation and Mycorrhizal Inoculation Influence the Rhizosphere Fungal Community of an Aged Trace-Element Polluted Soil
Cited by: 3
Author(s): Robin Raveau, Anissa Lounès-Hadj Sahraoui, Mohamed Hijri, Joël Fontaine
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9010068

Comparative Analysis of Bacterial Communities in Lutzomyia ayacuchensis Populations with Different Vector Competence to Leishmania Parasites in Ecuador and Peru
Cited by: 5
Author(s): Ahmed Tabbabi, Shinya Watanabe, Daiki Mizushima, Abraham G. Cáceres, Eduardo A. Gómez, Daisuke Yamamoto, Longzhu Cui, Yoshihisa Hashiguchi, Hirotomo Kato
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.01948

16S rRNA Gene Sequencing Reveals a Shift in the Microbiota of Diaphorina citri During the Psyllid Life Cycle
Cited by: 36
Author(s): Lixue Meng, Xiaoyang Li, Xiao-Qin Cheng, Hongyu Zhang
Software Mentions: 1
Published: about 7 years ago

10.3390/microorganisms8111828

Phosphorus Reduces Negative Effects of Nitrogen Addition on Soil Microbial Communities and Functions
Cited by: 25
Author(s): Zongwei Xia, Jingyi Yang, Changpeng Sang, Xu Wang, Lin Sun, Ping Jiang, Chao Wang, Edith Bai
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2020.00682

An Assessment of Climate Induced Increase in Soil Water Availability for Soil Bacterial Communities Exposed to Long-Term Differential Phosphorus Fertilization
Cited by: 2
Author(s): Kate C. Randall, Fiona Brennan, Nicholas Clipson, Rachel Creamer, Bryan S. Griffiths, Sean Storey, Evelyn Doyle
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms8091363

Faecal Microbiota of Dogs Offered a Vegetarian Diet with or without the Supplementation of Feather Meal and either Cornmeal, Rye or Fermented Rye: A Preliminary Study
Cited by: 6
Author(s): Julia Hankel, Amr Abd El‐Wahab, Richard Grone, Birgit Keller, Eric Galvez, Till Strowig, Christian Visscher
Software Mentions: 1
Published: about 6 years ago

10.1186/s42523-019-0012-4

Looking like the locals - gut microbiome changes post-release in an endangered species
Cited by: 36
Author(s): Rowena Chong, Catherine E. Grueber, Samantha Fox, Phil Wise, Vanessa R. Barrs, Carolyn J. Hogg, Katherine Belov
Software Mentions: 1
Published: almost 7 years ago

10.3390/microorganisms7100392

Mediterranean Native Leguminous Plants: A Reservoir of Endophytic Bacteria with Potential to Enhance Chickpea Growth under Stress Conditions
Cited by: 17
Author(s): Clarisse Brı́gido, Esther Menéndez, Ana Paço, Bernard R. Glick, Anabela D. F. Belo, Maria R. Félix, Marina Vieira de Carvalho
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-27491-1

Fish mitigate trophic depletion in marine cave ecosystems
Cited by: 13
Author(s): Simona Bussotti, Antonio Franco, Carlo Nike Bianchi, Pierre Chevaldonné, Lea Egea, Emanuela Fanelli, Christophe Lejeusne, Luigi Musco, Carlos Navarro‐Barranco, Alexis Pey, Serge Planes, Jean Vincent Vieux-Ingrassia, Paolo Guidetti
Software Mentions: 1
Published: about 8 years ago

10.1186/s12876-018-0785-z

Intestinal Candida parapsilosis isolates from Rett syndrome subjects bear potential virulent traits and capacity to persist within the host
Cited by: 9
Author(s): Francesco Strati, Antonio Calabrò, Claudio Donati, Claudio De Felice, Joussef Hayek, Olivier Jousson, Silvia Leoncini, Daniela Renzi, Lisa Rizzetto, Carlotta De Filippo, Duccio Cavalieri
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0219100

Artisans and dugout canoes reveal pieces of Atlantic Forest history
Cited by: 2
Author(s): Laís Lima de Paula, Michele de Sá Dechoum, Viviane Stern da Fonseca-Kruel, Neusa Tamaio, Natália Hanazaki
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-27709-2

Maternal Trophic Status and Offpsring Phenotype in a Marine Invertebrate
Cited by: 13
Author(s): Enrique González‐Ortegón, Lewis Le Vay, Mark Walton, Luis Giménez
Software Mentions: 1
Published: about 8 years ago

10.3390/ani11082219

Late Gestation Maternal Feed Restriction Decreases Microbial Diversity of the Placenta While Mineral Supplementation Improves Richness of the Fetal Gut Microbiome in Cattle
Cited by: 9
Author(s): Gwendolynn L Hummel, Kelly L Woodruff, Kathy J. Austin, Ryan M Knuth, Scott Lake, Hannah C Cunningham-Hollinger
Software Mentions: 1
Published: about 5 years ago

10.1128/mSphere.00084-21

Matrix Effects on the Delivery Efficacy of Bifidobacterium animalis subsp. <i>lactis</i> BB-12 on Fecal Microbiota, Gut Transit Time, and Short-Chain Fatty Acids in Healthy Young Adults
Cited by: 7
Author(s): Zhaoyong Ba, Yujin Lee, Huicui Meng, Penny M. Kris-Etherton, Connie J. Rogers, Zachery T. Lewis, David A. Mills, Emily J. Furumoto, M. Laura Rolon, Jennifer Fleming, Robert F. Roberts
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms8020170

Revealing the Variation and Stability of Bacterial Communities in Tomato Rhizosphere Microbiota
Cited by: 33
Author(s): Zhiqiang Cheng, Shaonan Lei, Ye Li, Wei Huang, Rongqin Ma, Juan Xiong, Ting Zhang, Lingyue Jin, Hafeez Ul Haq, Xiaohong Xu, Baoyu Tian
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms8091278

Effect of Sample Collection (Manual Expression vs. Pumping) and Skimming on the Microbial Profile of Human Milk Using Culture Techniques and Metataxonomic Analysis
Cited by: 11
Author(s): Maricela Rodríguez‐Cruz, Claudio Alba, Marina Aparicio, María Ángeles Checa, Leónides Fernández, Juan Miguel Díaz Rodríguez
Software Mentions: 1
Published: about 6 years ago

10.3390/microorganisms9081755

The Effect of Common Viral Inactivation Techniques on 16S rRNA Amplicon-Based Analysis of the Gut Microbiota
Cited by: 0
Author(s): Zachary L. McAdams, Kevin L. Gustafson, Aaron C. Ericsson
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0060010

Calcification by Reef-Building Sclerobionts
Cited by: 31
Author(s): Jennie Mallela
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0024885

Tracking Signals of Change in Mediterranean Fish Diversity Based on Local Ecological Knowledge
Cited by: 152
Author(s): Ernesto Azzurro, Paula S. Moschella, Francesc Maynou
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12862-018-1222-1

Evolution of contact and alarm calls in the Kenyan endemic Hinde’s babbler (Aves: Passeriformes)
Cited by: 2
Author(s): Jan Christian Habel, Martin Husemann, Werner Ulrich
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0119441

Ablation of Tumor Necrosis Factor Is Associated with Decreased Inflammation and Alterations of the Microbiota in a Mouse Model of Inflammatory Bowel Disease
Cited by: 52
Author(s): Yava Jones‐Hall, Ariangela J. Kozik, Cindy H. Nakatsu
Software Mentions: 1
Published: over 11 years ago

10.3390/ani9040151

Gut Microbiota Shifts in Pup Athymic BALB/c Mice: An Updated Identification in Nude Mice
Cited by: 0
Author(s): Yuting Li, Hao Sun, Bowen Du, Hui Xu
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.02128

Nutritional Models of Experimentally-Induced Subacute Ruminal Acidosis (SARA) Differ in Their Impact on Rumen and Hindgut Bacterial Communities in Dairy Cows
Cited by: 67
Author(s): J.C. Plaizier, Shucong Li, Hein Min Tun, Ehsan Khafipour
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0108630

Effects of Ocean Acidification on the Brown Alga Padina pavonica: Decalcification Due to Acute and Chronic Events
Cited by: 13
Author(s): Teba Gil-Díaz, Ricardo Haroun, Fernando Tuya, Séfora Betancor, María Ascensión Viera-Rodríguez
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2019.02047

Interaction Between Conservation Tillage and Nitrogen Fertilization Shapes Prokaryotic and Fungal Diversity at Different Soil Depths: Evidence From a 23-Year Field Experiment in the Mediterranean Area
Cited by: 45
Author(s): Gaia Piazza, Laura Ercoli, Marco Nuti, Elisa Pellegrino
Software Mentions: 1
Published: about 7 years ago

10.1186/s40168-017-0345-8

Preparing for the crewed Mars journey: microbiota dynamics in the confined Mars500 habitat during simulated Mars flight and landing
Cited by: 42
Author(s): Petra Schwendner, Alexander Mahnert, Kaisa Koskinen, Christine Moissl-Eichinger, Simon Barczyk, Reinhard Wirth, Gabriele Berg, Petra Rettberg
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2020.00053

Long-Term Effects of Multi-Drug-Resistant Tuberculosis Treatment on Gut Microbiota and Its Health Consequences
Cited by: 26
Author(s): Jinyu Wang, Ke Xiong, Shanliang Zhao, Chao Zhang, Jianwen Zhang, Lei Xu, Aiguo Ma
Software Mentions: 1
Published: over 6 years ago

10.1002/ece3.7460

High‐throughput sequencing outperforms traditional morphological methods in Blue Catfish diet analysis and reveals novel insights into diet ecology
Cited by: 5
Author(s): Heather K. Evans, Aaron J. Bunch, Joseph D. Schmitt, Frederick J. Hoogakker, Kara B. Carlson
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0163494

Role of Recruitment Processes in Structuring Coralligenous Benthic Assemblages in the Northern Adriatic Continental Shelf
Cited by: 22
Author(s): Federica Fava, Massimo Ponti, Marco Abbiati
Software Mentions: 1
Published: almost 10 years ago

10.5713/ajas.19.0499

β-Carotene prevents weaning-induced intestinal inflammation by modulating gut microbiota in piglets
Cited by: 30
Author(s): Ruonan Li, Lingqian Li, Hong Pan, Wuying Lang, Junnan Hui, Yang Yu, Xin Zheng
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0195352

Successional dynamics of marine fouling hydroids (Cnidaria: Hydrozoa) at a finfish aquaculture facility in the Mediterranean Sea
Cited by: 10
Author(s): Luis Martell, Roberta Bracale, Steven A. Carrion, Jennifer E. Purcell, Marco Lezzi, Cinzia Gravili, Stefano Piraino, Ferdinando Boero
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0075767

Conserving Biodiversity in a Human-Dominated World: Degradation of Marine Sessile Communities within a Protected Area with Conflicting Human Uses
Cited by: 52
Author(s): Valeriano Parravicini, Fiorenza Micheli, Monica Montefalcone, Carla Morri, Elisa Villa, Michela Castellano, Paolo Pedrini, Carlo Nike Bianchi
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0131080

Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps
Cited by: 1,567
Author(s): Lisa A. Levin, Guillermo Mendoza, Benjamin M. Grupe, Jennifer P. Gonzalez, Brittany M. Jellison, Greg W. Rouse, Andrew R. Thurber, Anders Warén
Software Mentions: 1
Published: about 11 years ago

10.3389/fmicb.2017.02494

Fight Fungi with Fungi: Antifungal Properties of the Amphibian Mycobiome
Cited by: 46
Author(s): Patrick J. Kearns, Sarah Fischer, Saioa Fernández-Beaskoetxea, Caitlin R. Gabor, Jaime Bosch, Jennifer L. Bowen, Michael F. Tlusty, Douglas C. Woodhams
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.02693

Regrowth of Microcosm Biofilms on Titanium Surfaces After Various Antimicrobial Treatments
Cited by: 12
Author(s): Qi Han, Yaling Jiang, Bernd W. Brandt, Jiamin Yang, Yu Chen, M.J. Buijs, Wim Crielaard, Lei Cheng, Dongmei Deng
Software Mentions: 1
Published: almost 7 years ago

10.1128/mSphere.00283-21

Gut Microbiome and Serum Metabolome Alterations Associated with Isolated Dystonia
Cited by: 7
Author(s): Lingyan Ma, Jing Keng, Min Cheng, Hua Pan, Bo Feng, Yongfeng Hu, Tao Feng, Fan Yang
Software Mentions: 1
Published: about 5 years ago

10.1186/s40168-020-00915-9

Soil origin and plant genotype structure distinct microbiome compartments in the model legume Medicago truncatula
Cited by: 78
Author(s): Shawn P. Brown, Michael A. Grillo, Justin C. Podowski, Katy D. Heath
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.01319

Soil Photosynthetic Microbial Communities Mediate Aggregate Stability: Influence of Cropping Systems and Herbicide Use in an Agricultural Soil
Cited by: 31
Author(s): Olivier Crouzet, Laurent Consentino, Jean-Pierre Pétraud, Christelle Marrauld, Jean‐Pierre Aguer, Sylvie Bureau, Carine Le Bourvellec, Line Touloumet, Annette Bérard
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2148-14-156

Importance of plasticity and local adaptation for coping with changing salinity in coastal areas: a test case with barnacles in the Baltic Sea
Cited by: 34
Author(s): Anna-Lisa Wrange, Carl Andrè, Torbjörn Lundh, Ulrika Lind, Anders Blomberg, Per R. Jonsson, Jonathan N. Havenhand
Software Mentions: 1
Published: over 12 years ago

10.3389/fmicb.2016.01377

Unexpectedly High Beta-Diversity of Root-Associated Fungal Communities in the Bolivian Andes
Cited by: 25
Author(s): Christopher J. Barnes, Carla Maldonado, Tobias Guldberg Frøslev, Alexandre Antonelli, Nina Rønsted
Software Mentions: 1
Published: about 10 years ago

10.1186/s40168-021-01109-7

Bacterial colonization dynamics and antibiotic resistance gene dissemination in the hospital environment after first patient occupancy: a longitudinal metagenetic study
Cited by: 8
Author(s): Tilman E. Klassert, Rasmus Leistner, Cristina Zubiría-Barrera, Magdalena Stock, Marta López, Robert Neubert, Dominik Driesch, Petra Gastmeier, Hortense Slevogt
Software Mentions: 1
Published: about 5 years ago

10.1016/j.csbj.2020.08.028

Multi-population cohort meta-analysis of human intestinal microbiota in early life reveals the existence of infant community state types (ICSTs)
Cited by: 15
Author(s): Leonardo Mancabelli, Chiara Tarracchini, Christian Milani, Gabriele Andrea Lugli, Federico Fontana, Francesca Turroni, Douwe van Sinderen, Marco Ventura
Software Mentions: 1
Published: over 6 years ago

10.3390/ijerph18115667

Assessment of Irrigation Water Use Efficiency in Citrus Orchards Using AHP
Cited by: 5
Author(s): Rocío Poveda-Bautista, Bernat Roig Merino, H. Puerto, Juan Buitrago‐Vera
Software Mentions: 1
Published: over 5 years ago

10.1007/s13280-018-1133-9

Relative impacts of fishing and eutrophication on coastal fish assessed by comparing a no-take area with an environmental gradient
Cited by: 23
Author(s): Lena Bergström, Martin Karlsson, Ulf Bergström, Leif Pihl, Patrik Kraufvelin
Software Mentions: 1
Published: almost 8 years ago

10.3390/ani9040143

The Effects of Dietary Insect Meal from Hermetia illucens Prepupae on Autochthonous Gut Microbiota of Rainbow Trout (Oncorhynchus mykiss)
Cited by: 93
Author(s): Simona Rimoldi, Elisabetta Gini, Federica Iannini, Laura Gasco, Genciana Terova
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0150899

Avian Assemblages at Bird Baths: A Comparison of Urban and Rural Bird Baths in Australia
Cited by: 10
Author(s): Grainne Cleary, Holly Parsons, Adrian L. V. Davis, Bill R. Coleman, Darryl Jones, Kelly K. Miller, Michael A. Weston
Software Mentions: 1
Published: over 10 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292