cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.3389/fcimb.2021.637394

Dynamic Observation of the Effect of Maternal Caries on the Oral Microbiota of Infants Aged 12–24 Months
Cited by: 2
Author(s): Fĕi Li, Ding Fu, Danying Tao, Xiping Feng, Chun Hung Chu, Wei Xu, Hai‐Xia Lu
Software Mentions: 1
Published: about 5 years ago

10.3389/fcimb.2018.00433

The Gastric Microbiome Is Perturbed in Advanced Gastric Adenocarcinoma Identified Through Shotgun Metagenomics
Cited by: 82
Author(s): Yu‐Chen Hu, Wei Wei Pang, Yun Huang, Yan Zhang, Chaojun Zhang
Software Mentions: 1
Published: over 7 years ago

10.3389/fcimb.2021.579386

The Effects of Hemodialysis and Peritoneal Dialysis on the Gut Microbiota of End-Stage Renal Disease Patients, and the Relationship Between Gut Microbiota and Patient Prognoses
Cited by: 26
Author(s): Dan Luo, Wenbo Zhao, Zhiming Lin, Jianhao Wu, Hsiu-Li Lin, Yongjie Li, Jun Song, Jun Zhang, Hui Peng
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2020.00058

Alterations in Gut Microbiota of Gestational Diabetes Patients During the First Trimester of Pregnancy
Cited by: 59
Author(s): Shujuan Ma, Yu You, Lingting Huang, Sisi Long, Jiayue Zhang, Chuhao Guo, Na Zhang, Xinrui Wu, Yanni Xiao, Hongzhuan Tan
Software Mentions: 1
Published: over 6 years ago

10.3389/fcimb.2017.00540

Sinus Microanatomy and Microbiota in a Rabbit Model of Rhinosinusitis
Cited by: 27
Author(s): Do‐Yeon Cho, Calvin Mackey, William J. Van Der Pol, Daniel Skinner, Casey D. Morrow, Trenton R. Schoeb, Steven M. Rowe, W. Edward Swords, Guillermo J. Tearney, Bradford A. Woodworth
Software Mentions: 1
Published: over 8 years ago

10.3389/fcimb.2021.658203

Association Between Oral Microbiota and Cigarette Smoking in the Chinese Population
Cited by: 33
Author(s): Yijing Jia, Ying Liao, Yanhu He, Zheng Miao, Xia‐Ting Tong, Wen‐Qiong Xue, Jiang-Bo Zhang, Lei‐Lei Yuan, Wenli Zhang, Wei‐Hua Jia
Software Mentions: 1
Published: about 5 years ago

10.3389/fcimb.2020.00402

Gut Dysbiosis in Chagas Disease. A Possible Link to the Pathogenesis
Cited by: 10
Author(s): Marcela de Souza-Basqueira, Roberto Marques Ribeiro, Léa Campos de Oliveira, Carlos Henrique Valente Moreira, Roberta Cristina Ruedas Martins, Diego Castillo Franco, Pâmela Pontes Penas Amado, Márcia Pinto Alves Mayer, Éster Cerdeira Sabino
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcimb.2021.636808

Changes in Microbial Community Composition Related to Sex and Colon Cancer by Nrf2 Knockout
Cited by: 7
Author(s): Chin Hee Song, Nayoung Kim, Ryoung Hee Nam, Soo In Choi, Jeong Eun Yu, Heewon Nho, Young Joon Surh
Software Mentions: 1
Published: about 5 years ago

10.3389/fcimb.2020.583761

Oral and Fecal Microbiome in Molar-Incisor Pattern Periodontitis
Cited by: 20
Author(s): Pâmela Pontes Penas Amado, Dione Kawamoto, Emmanuel Albuquerque‐Souza, Diego Castillo Franco, Luciana Saraiva, Renato Corrêa Viana Casarin, Anna Carolina Ratto Tempestini Horliana, Márcia Pinto Alves Mayer
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcimb.2021.640309

Salivary Microbiota for Gastric Cancer Prediction: An Exploratory Study
Cited by: 31
Author(s): Kun Huang, Xuefeng Gao, Lili Wu, Bin Yan, Zikai Wang, Xiaomei Zhang, Lihua Peng, Jiu-fei Yu, Gang Sun, Yunsheng Yang
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2021.625589

Biliary Microbiota in Choledocholithiasis and Correlation With Duodenal Microbiota
Cited by: 12
Author(s): Jiahuai Han, Shuodong Wu, Ying Fan, Yu Tian, Jing Kong
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2021.629438

Assessment of Oral Vancomycin-Induced Alterations in Gut Bacterial Microbiota and Metabolome of Healthy Men
Cited by: 7
Author(s): Andrew Hyoung Jin Kim, Yujin Lee, Eunwoo Kim, Sang Chun Ji, Jae Yong Chung, Joo Youn Cho
Software Mentions: 1
Published: about 5 years ago

10.3389/fcimb.2020.555508

Alterations in Urobiome in Patients With Bladder Cancer and Implications for Clinical Outcome: A Single-Institution Study
Cited by: 35
Author(s): Jiayi Zeng, Guihao Zhang, Chunxiao Chen, Kun Li, Yuehui Wen, Jie Zhao, Peng Wu
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2018.00422

Establishment and Development of Oral Microflora in 12–24 Month-Old Toddlers Monitored by High-Throughput Sequencing
Cited by: 18
Author(s): Fĕi Li, Danying Tao, Xiping Feng, Chun Hung Chu, Hai‐Xia Lu
Software Mentions: 1
Published: over 7 years ago

10.3389/fcimb.2019.00039

Frequency of Tongue Cleaning Impacts the Human Tongue Microbiome Composition and Enterosalivary Circulation of Nitrate
Cited by: 59
Author(s): Gena D. Tribble, Nikola Angelov, Robin Weltman, Bing-Yan Wang, Sridhar V. Eswaran, Isabel Gay, Kavitha Parthasarathy, Doan-Hieu V. Dao, Katherine N. Richardson, Nadia M. Ismail, Iraida Sharina, Embriette R. Hyde, Nadim J. Ajami, Joseph F. Petrosino, Nathan S. Bryan
Software Mentions: 1
Published: over 7 years ago

10.3389/fcimb.2021.625581

Nasopharyngeal Microbiome Signature in COVID-19 Positive Patients: Can We Definitively Get a Role to Fusobacterium periodonticum?
Cited by: 48
Author(s): Carmela Nardelli, Ivan Gentile, Mario Setaro, Carmela Di Domenico, Biagio Pinchera, Antonio Riccardo Buonomo, Emanuela Zappulo, Riccardo Scotto, Giovanni Luca Scaglione, Giuseppe Castaldo, Ettore Capoluongo
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2019.00101

Phenylketonuria Diet Promotes Shifts in Firmicutes Populations
Cited by: 29
Author(s): G. Bassanini, Camilla Ceccarani, Francesca Borgo, Marco Severgnini, Valentina Rovelli, Giulia Morace, Elvira Verduci, Elisa Borghi
Software Mentions: 1
Published: over 7 years ago

10.3389/fendo.2021.662725

Clinical Manifestations of Polycystic Ovary Syndrome and Associations With the Vaginal Microbiome: A Cross-Sectional Based Exploratory Study
Cited by: 14
Author(s): Hong Xiang, Pengfei Qin, Jiechen Yin, Yong Shi, Xuan Yang, Zhengqi Chen, Xu Zhou, Hong Yu, Danhong Peng, Bei Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fendo.2021.630526

The Impact of Gut Microbiome on Metabolic Disorders During Catch-Up Growth in Small-for-Gestational-Age
Cited by: 7
Author(s): Jie An, Junqi Wang, Li Guo, Xiao Ming Yuan, Wenli Lü, Lin Li, Lifen Chen, Xinqiong Wang, Zhiya Dong
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.621803

Effects of Vaccination Against Coccidiosis on Gut Microbiota and Immunity in Broiler Fed Bacitracin and Berry Pomace
Cited by: 7
Author(s): Quail Das, Julie Shay, Martin Gauthier, Yin X, Teri-Lyn Hasted, Kelly Ross, Carl Julien, Hassina Yacini, Yan Martel Kennes, Keith Warriner, Massimo F. Marcone, Moussa S. Diarra
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2020.599625

Host Defense Effectors Expressed by Hemocytes Shape the Bacterial Microbiota From the Scallop Hemolymph
Cited by: 7
Author(s): Roxana González, Ana Teresa Gonçalves, Rodrigo Rojas, Katherina Brokordt, Rafael Diego Rosa, Paulina Schmitt
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2021.755481

Consumption of Butylated Starch Alleviates the Chronic Restraint Stress-Induced Neurobehavioral and Gut Barrier Deficits Through Reshaping the Gut Microbiota
Cited by: 22
Author(s): Peijun Tian, Huiyue Zhu, Xin Qian, Ying Chen, Zheng Wang, Jianxin Zhao, Hao Zhang, Gang Wang
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2021.669672

Trans Fatty Acid Intake Induces Intestinal Inflammation and Impaired Glucose Tolerance
Cited by: 18
Author(s): Tomio Okamura, Yoshitaka Hashimoto, Susumu Majima, Takafumi Senmaru, Emi Ushigome, Naoko Nakanishi, Mai Asano, Masahiro Yamazaki, Hiroshi Takakuwa, Michiaki Fukui
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2020.02101

Intestinal Barrier Breakdown and Mucosal Microbiota Disturbance in Neuromyelitis Optical Spectrum Disorders
Cited by: 12
Author(s): Chun-Ping Chu, Sha Tan, Tao Li, Junli Gong, Yanyu Chang, Yuge Wang, Ping Fan, Dan He, Yiwen Ruan, Wei Qiu
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2021.688886

Preservation of Gastrointestinal Mucosal Barrier Function and Microbiome in Patients With Controlled HIV Infection
Cited by: 6
Author(s): Gerald Mak, John Zaunders, Michelle Bailey, Nabila Seddiki, Geraint B. Rogers, Lex Leong, Tri Giang Phan, Anthony D. Kelleher, Kersten K. Koelsch, Mark Boyd, Mark Danta
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2020.00200

Murine Gut Microbiome Association With APOE Alleles
Cited by: 34
Author(s): Ishita Parikh, Janice L. Estus, Diana J. Zajac, Manasi Malik, Juan Maldonado Weng, Leon M. Tai, George E. Chlipala, Mary Jo LaDu, Stefan J. Green, Steven Estus
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2020.607754

Gut–Liver Immune Response and Gut Microbiota Profiling Reveal the Pathogenic Mechanisms of Vibrio harveyi in Pearl Gentian Grouper (Epinephelus lanceolatus♂ × E. fuscoguttatus♀)
Cited by: 31
Author(s): Yiqin Deng, Yaqiu Zhang, Haoxiang Chen, Li‐Wen Xu, Qian Wang, Feng Jiang
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.713485

Glycerol Monolaurate Ameliorated Intestinal Barrier and Immunity in Broilers by Regulating Intestinal Inflammation, Antioxidant Balance, and Intestinal Microbiota
Cited by: 19
Author(s): Linglian Kong, Zhenhua Wang, Chuanpi Xiao, Qidong Zhu, Zhigang Song
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2020.607609

Neonatal Diet Impacts the Large Intestine Luminal Metabolome at Weaning and Post-Weaning in Piglets Fed Formula or Human Milk
Cited by: 5
Author(s): Fernanda Rosa, Katelin S. Matazel, Anne K. Bowlin, Keith D. Williams, Ahmed A. Elolimy, Sean H. Adams, Lars Bode, Laxmi Yeruva
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2020.01703

Microbiome and Metabolome Analyses Reveal the Disruption of Lipid Metabolism in Systemic Lupus Erythematosus
Cited by: 51
Author(s): Jingquan He, Tianlong Chan, Xiaoping Hong, Fengping Zheng, Chaowei Zhu, Yin Li, Weier Dai, Donge Tang, Dongzhou Liu, Yong Dai
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2019.00666

Oral Administration of Compound Probiotics Improved Canine Feed Intake, Weight Gain, Immunity and Intestinal Microbiota
Cited by: 50
Author(s): Haiyan Xu, Weiqiang Huang, Qiangchuan Hou, Lai‐Yu Kwok, Wuri Laga, Yanjie Wang, Hongbing Ma, Zhihong Sun, Heping Zhang
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2020.00468

Fungal Dysbiosis and Intestinal Inflammation in Children With Beta-Cell Autoimmunity
Cited by: 31
Author(s): Jarno Honkanen, Arja Vuorela, Daniel Muthas, L. Orivuori, Kristiina Luopajärvi, Mysore V. Tejesvi, Anton Lavrinienko, Anna Maria Pirttilä, Christopher L. Fogarty, Taina Härkönen, Jorma Ilonen, Terhi Ruohtula, Mikael Knip, Janne J. Koskimäki, Outi Vaarala
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2020.01654

Altered Microbiota, Impaired Quality of Life, Malabsorption, Infection, and Inflammation in CVID Patients With Diarrhoea
Cited by: 17
Author(s): Cornelia M. van Schewick, Christina Nöltner, Svenja Abel, Siobhan O. Burns, Sarita Workman, Andrew Symes, David Sánchez-Migallón Guzman, Michele Proietti, Alla Bulashevska, Fernando Moreira, Veronika Soetedjo, David M. Lowe, Bodo Grimbacher
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2021.700570

Adalimumab Therapy Restores the Gut Microbiota in Patients With Ankylosing Spondylitis
Cited by: 14
Author(s): Zena Chen, Xuqi Zheng, Xinyu Wu, Jialing Wu, Xiaomin Li, Qiujing Wei, Xi Zhang, Lin Fang, Ou Jin, Gu J
Software Mentions: 1
Published: almost 5 years ago

10.3389/fnint.2021.719076

A Multivariate Assessment of Age-Related Cognitive Impairment in Octodon degus
Cited by: 7
Author(s): Daniela Rivera, Carolina B. Lindsay, Carolina A. Oliva, Francisco Bozinovic, Nibaldo C. Inestrosa
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmars.2020.566663

Energy Sources of the Depth-Generalist Mixotrophic Coral Stylophora pistillata
Cited by: 27
Author(s): Stephane Martinez, Yehoshua Kolodny, Eli Shemesh, Federica Scucchia, Reinat Nevo, Smadar Levin-Zaidman, Yossi Paltiel, Nir Keren, Dan Tchernov, Tali Mass
Software Mentions: 1
Published: over 5 years ago

10.3389/fmed.2021.637246

Compare the Effect of Inhaled Corticosteroids and Systemic Corticosteroids on Sputum Microbiome of AECOPD
Cited by: 4
Author(s): Nan Ma, Yu-Jing Qi, Xiaona Liang, Jing Bai, Jingmin Deng, Meihua Li, He Zhou
Software Mentions: 1
Published: over 5 years ago

10.3389/fmed.2021.655474

Gut Microbiota and Related Electronic Multisensorial System Changes in Subjects With Symptomatic Uncomplicated Diverticular Disease Undergoing Rifaximin Therapy
Cited by: 6
Author(s): Antonio De Vincentis, Marco Santonico, Federica Del Chierico, Annamaria Altomare, Benedetta Marigliano, Alice Laudisio, Sofia Reddel, Simone Grasso, Alessandro Zompanti, Giorgio Pennazza, Lorenza Putignani, Michele Pier Luca Guarino, Michele Cicala, Raffaele Antonelli Incalzi
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2018.00487

Host and Aquatic Environment Shape the Amphibian Skin Microbiome but Effects on Downstream Resistance to the Pathogen Batrachochytrium dendrobatidis Are Variable
Cited by: 56
Author(s): Andrea J. Jani, Cheryl J. Briggs
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2017.02073

Diets Alter the Gut Microbiome of Crocodile Lizards
Cited by: 64
Author(s): Haiying Jiang, Jinge Ma, Juan Li, Xiujuan Zhang, Linmiao Li, Nan He, Haiyang Liu, Shuyi Luo, Zhengjun Wu, Ri-Chou Han, Jinping Chen
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2017.00065

Combined Carbohydrates Support Rich Communities of Particle-Associated Marine Bacterioplankton
Cited by: 25
Author(s): Martin Sperling, Judith Piontek, Anja Engel, Karen Helen Wiltshire, Jutta Niggemann, Gunnar Gerdts, Antje Wichels
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2021.721441

Different Amounts of Nitrogen Fertilizer Applications Alter the Bacterial Diversity and Community Structure in the Rhizosphere Soil of Sugarcane
Cited by: 11
Author(s): Yan Gu, Jihua Wang, Wei‐Jun Cai, Guoliang Li, Man Yu, Sen Yang
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2019.01252

Shotgun Metagenomics Reveals the Benthic Microbial Community Response to Plastic and Bioplastic in a Coastal Marine Environment
Cited by: 117
Author(s): Lee J. Pinnell, John Turner
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2021.614501

Assembly Patterns of the Rhizosphere Microbiome Along the Longitudinal Root Axis of Maize (Zea mays L.)
Cited by: 46
Author(s): Lioba Rüger, Kai Feng, Kenneth Dumack, Jule Freudenthal, Yan Chen, Run‐Cang Sun, Monica Wilson, Peng Yu, Bo Sun, Ye Deng, Frank Hochholdinger, Doris Vetterlein, Michael Bonkowski
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.685111

Impact of Soil Disinfestation on Fungal and Bacterial Communities in Soil With Cucumber Cultivation
Cited by: 2
Author(s): Yan Wang, Yujie Jin, Ping Han, Jianjun Hao, Hongyu Pan, Jinliang Liu
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2020.617800

Caeca Microbial Variation in Broiler Chickens as a Result of Dietary Combinations Using Two Cereal Types, Supplementation of Crude Protein and Sodium Butyrate
Cited by: 8
Author(s): Daniel Borda-Molina, Gábor Mátis, Máté Mackei, Zsuzsanna Neogrády, Korinna Huber, Jana Seifert, Amélia Camarinha‐Silva
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.656269

Temporal and Spatial Changes in Phyllosphere Microbiome of Acacia Trees Growing in Arid Environments
Cited by: 11
Author(s): Ashraf Al-Ashhab, Shiri Meshner, Rivka Alexander-Shani, Hana Dimerets, Michael Brandwein, Yael Bar-Lavan, Gidon Winters
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.00889

The Effect of Disease and Season to Hepatopancreas and Intestinal Mycobiota of Litopenaeus vannamei
Cited by: 21
Author(s): Juan Li, Haiying Jiang, Linmiao Li, Xiujuan Zhang, Jinping Chen
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2012.00444

Same, same but different: symbiotic bacterial associations in GBR sponges
Cited by: 44
Author(s): Nicole S. Webster, Heidi M. Luter, Rochelle M. Soo, Emmanuelle S. Botté, Rachel L. Simister, Dave Abdo, Steve W Whalan
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2020.00367

Metatranscriptomic Profiling Reveals the Effect of Breed on Active Rumen Eukaryotic Composition in Beef Cattle With Varied Feed Efficiency
Cited by: 18
Author(s): Yawei Zhang, Fuyong Li, Yanhong Chen, Hao Wu, Qingxiang Meng, Le Luo Guan
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.02588

Exposure to Antibiotics Affects Saponin Immersion-Induced Immune Stimulation and Shift in Microbial Composition in Zebrafish Larvae
Cited by: 24
Author(s): Adrià López Nadal, David Peggs, G.F. Wiegertjes, Sylvia Brugman
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2019.01255

Diatom-Bacteria Interactions Modulate the Composition and Productivity of Benthic Diatom Biofilms
Cited by: 53
Author(s): Coco Koedooder, Willem Stock, Anne Willems, Sven Mangelinckx, Marleen De Troch, Wim Vyverman, Koen Sabbe
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2017.01435

Microbial Community Structure and the Persistence of Cyanobacterial Populations in Salt Crusts of the Hyperarid Atacama Desert from Genome-Resolved Metagenomics
Cited by: 62
Author(s): Kari Finstad, Alexander J. Probst, Brian C. Thomas, Gary L. Andersen, Cecilia Demergasso, Alex Echeverría, R. Amundson, Jillian F. Banfield
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2020.591462

Differential Responses to Dietary Protein and Carbohydrate Ratio on Gut Microbiome in Obese vs. Lean Cats
Cited by: 6
Author(s): Qinghong Li, Yuanlong Pan
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.01572

Seasonal Changes of Airborne Bacterial Communities Over Tokyo and Influence of Local Meteorology
Cited by: 61
Author(s): Jun Uetake, Yutaka Tobo, Yasushi Uji, Thomas C. J. Hill, Paul J. DeMott, Sonia M. Kreidenweis, Ryohei Misumi
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2020.01165

Cryoconite Hole Location in East-Antarctic Untersee Oasis Shapes Physical and Biological Diversity
Cited by: 14
Author(s): Klemens Weisleitner, A. Perras, Seraphin Hubert Unterberger, Christine Moissl-Eichinger, Dale T. Andersen, Birgit Sattler
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2019.01848

Different Gut Microbial Profiles in Sub-Saharan African and South Asian Women of Childbearing Age Are Primarily Associated With Dietary Intakes
Cited by: 15
Author(s): Minghua Tang, Daniel N. Frank, Antoinette Tshefu, Adrien Lokangaka, Shivaprasad S. Goudar, Sangappa Dhaded, Manjunath S Somannavar, Audrey E. Hendricks, Diana Ir, Charles E. Robertson, Jennifer Kemp, Rebecca L. Lander, Jamie E Westcott, K. Michael Hambidge, Nancy F. Krebs
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2021.632715

Experimental Warming Reduces Survival, Cold Tolerance, and Gut Prokaryotic Diversity of the Eastern Subterranean Termite, Reticulitermes flavipes (Kollar)
Cited by: 8
Author(s): Rachel A. Arango, Sean D. Schoville, Cameron R. Currie, Camila Carlos‐Shanley
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.00093

Production of Naturally γ-Aminobutyric Acid-Enriched Cheese Using the Dairy Strains Streptococcus thermophilus 84C and Lactobacillus brevis DSM 32386
Cited by: 27
Author(s): Ilaria Carafa, Giorgia Stocco, T. Nardin, R. Larcher, Giovanni Bittante, Kieran Tuohy, Elena Franciosi
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2018.02209

Dietary Bile Salt Types Influence the Composition of Biliary Bile Acids and Gut Microbiota in Grass Carp
Cited by: 27
Author(s): Fan Xiong, Shan Wu, Jing Zhang, Ivan Jakovlić, Wen Xiang Li, Hong Zou, Ming Li, Gui Tang Wang
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2017.00784

Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle
Cited by: 23
Author(s): Cynthia B. Silveira, Gustavo Bueno Gregoracci, Felipe H. Coutinho, Genivaldo G. Z. Silva, John M. Haggerty, Louisi Souza de Oliveira, Anderson de Souza Cabral, Carlos Eduardo de Rezende, Cristiane C. Thompson, Ronaldo B. Francini‐Filho, Robert A. Edwards, Elizabeth A. Dinsdale, Fabiano L. Thompson
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2019.02459

The Stain of the Original Salt: Red Heats on Chrome Tanned Leathers and Purple Spots on Ancient Parchments Are Two Sides of the Same Ecological Coin
Cited by: 12
Author(s): Nicoletta Perini, F. Mercuri, María Cristina Thaller, S. Orlanducci, Domenico Castiello, Valerio Talarico, Luciana Migliore
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2019.02634

Exogenous Nitric Oxide and Phosphorus Stress Affect the Mycorrhization, Plant Growth, and Associated Microbes of Carya illinoinensis Seedlings Colonized by Tuber indicum
Cited by: 12
Author(s): Xiaoping Zhu, Xin Li, Chenguang Wu, Lei Ye, Zongjing Kang
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2018.00946

Geographical and Cultivar Features Differentiate Grape Microbiota in Northern Italy and Spain Vineyards
Cited by: 82
Author(s): Valerio Mezzasalma, Anna Sandionigi, Lorenzo Guzzetti, Andrea Galimberti, S. Grando, Javier Tardáguila, Massimo Labra
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.569366

Inoculation With the Plant-Growth-Promoting Rhizobacterium Pseudomonas fluorescens LBUM677 Impacts the Rhizosphere Microbiome of Three Oilseed Crops
Cited by: 21
Author(s): J. Jiménez, Amy Novinscak, Martin Filion
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2021.613356

Safety and Efficacy of a Phage, kpssk3, in an in vivo Model of Carbapenem-Resistant Hypermucoviscous Klebsiella pneumoniae Bacteremia
Cited by: 11
Author(s): Yun-Long Shi, Yuan Peng, Yixin Zhang, Yu Chen, Cheng Zhang, X. G. Luo, Yajie Chen, Zhiqiang Yuan, Jing Chen, Yanhong Gong
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.02833

Impact of Sample Preservation and Manipulation on Insect Gut Microbiome Profiling. A Test Case With Fruit Flies (Diptera, Tephritidae)
Cited by: 21
Author(s): Maarten De Cock, M. Virgilio, Peter Vandamme, Antonios A. Augustinos, Kostas Bourtzis, Anne Willems, M. De Meyer
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.00796

Key Role of Alphaproteobacteria and Cyanobacteria in the Formation of Stromatolites of Lake Dziani Dzaha (Mayotte, Western Indian Ocean)
Cited by: 31
Author(s): Emmanuelle Gérard, Siham de Goeyse, Mylène Hugoni, Hélène Agogué, Laurent Richard, Vincent Milesi, François Guyot, Léna Lecourt, Stéphan Borensztajn, Marie-Béatrice Joseph, Thomas Leclerc, Gérard Sarazin, Didier Jézéquel, Christophe Leboulanger, Magali Ader
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2019.00553

Chemical Dispersant Enhances Microbial Exopolymer (EPS) Production and Formation of Marine Oil/Dispersant Snow in Surface Waters of the Subarctic Northeast Atlantic
Cited by: 8
Author(s): Laura Durán Suja, Xindi Chen, Stephen Summers, David M. Paterson, Tony Gutiérrez
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2017.01848

Sample Preservation, DNA or RNA Extraction and Data Analysis for High-Throughput Phytoplankton Community Sequencing
Cited by: 53
Author(s): Anita Mäki, Pauliina Salmi, Anu Mikkonen, Anke Kremp, Marja Tiirola
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2021.665853

Captivity Is Associated With Gut Mycobiome Composition in Tibetan Macaques (Macaca thibetana)
Cited by: 16
Author(s): Binghua Sun, Yingna Xia, Paul A. Garber, Katherine R. Amato, Andrés Gómez, Xiaojuan Xu, Wenbo Li, Mingjing Huang, Dong-Po Xia, Xi Wang, Jinhua Li
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.01948

16S rRNA Gene Sequencing Reveals a Shift in the Microbiota of Diaphorina citri During the Psyllid Life Cycle
Cited by: 36
Author(s): Lixue Meng, Xiaoyang Li, Xiao-Qin Cheng, Hongyu Zhang
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2020.00682

An Assessment of Climate Induced Increase in Soil Water Availability for Soil Bacterial Communities Exposed to Long-Term Differential Phosphorus Fertilization
Cited by: 2
Author(s): Kate C. Randall, Fiona Brennan, Nicholas Clipson, Rachel Creamer, Bryan S. Griffiths, Sean Storey, Evelyn Doyle
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.02128

Nutritional Models of Experimentally-Induced Subacute Ruminal Acidosis (SARA) Differ in Their Impact on Rumen and Hindgut Bacterial Communities in Dairy Cows
Cited by: 67
Author(s): J.C. Plaizier, Shucong Li, Hein Min Tun, Ehsan Khafipour
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2019.02047

Interaction Between Conservation Tillage and Nitrogen Fertilization Shapes Prokaryotic and Fungal Diversity at Different Soil Depths: Evidence From a 23-Year Field Experiment in the Mediterranean Area
Cited by: 45
Author(s): Gaia Piazza, Laura Ercoli, Marco Nuti, Elisa Pellegrino
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2020.00053

Long-Term Effects of Multi-Drug-Resistant Tuberculosis Treatment on Gut Microbiota and Its Health Consequences
Cited by: 26
Author(s): Jinyu Wang, Ke Xiong, Shanliang Zhao, Chao Zhang, Jianwen Zhang, Lei Xu, Aiguo Ma
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2017.02494

Fight Fungi with Fungi: Antifungal Properties of the Amphibian Mycobiome
Cited by: 46
Author(s): Patrick J. Kearns, Sarah Fischer, Saioa Fernández-Beaskoetxea, Caitlin R. Gabor, Jaime Bosch, Jennifer L. Bowen, Michael F. Tlusty, Douglas C. Woodhams
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.02693

Regrowth of Microcosm Biofilms on Titanium Surfaces After Various Antimicrobial Treatments
Cited by: 12
Author(s): Qi Han, Yaling Jiang, Bernd W. Brandt, Jiamin Yang, Yu Chen, M.J. Buijs, Wim Crielaard, Lei Cheng, Dongmei Deng
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2019.01319

Soil Photosynthetic Microbial Communities Mediate Aggregate Stability: Influence of Cropping Systems and Herbicide Use in an Agricultural Soil
Cited by: 31
Author(s): Olivier Crouzet, Laurent Consentino, Jean-Pierre Pétraud, Christelle Marrauld, Jean‐Pierre Aguer, Sylvie Bureau, Carine Le Bourvellec, Line Touloumet, Annette Bérard
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2016.01377

Unexpectedly High Beta-Diversity of Root-Associated Fungal Communities in the Bolivian Andes
Cited by: 25
Author(s): Christopher J. Barnes, Carla Maldonado, Tobias Guldberg Frøslev, Alexandre Antonelli, Nina Rønsted
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2015.01008

Bacterial endophyte communities in the foliage of coast redwood and giant sequoia
Cited by: 47
Author(s): Alyssa A. Carrell, A. Carolin Frank
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2019.02397

Species-Specific Differences in the Microbiomes and Organic Exudates of Crustose Coralline Algae Influence Bacterioplankton Communities
Cited by: 13
Author(s): Zachary A. Quinlan, Raphael Ritson‐Williams, Brenna J Carroll, Craig A. Carlson, Craig E. Nelson
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2018.02001

Assessment of Bacterial Communities Associated With the Skin of Costa Rican Amphibians at La Selva Biological Station
Cited by: 17
Author(s): Juan G. Abarca, Gabriel Vargas, Ibrahim Zuñiga, Steven M. Whitfield, Douglas C. Woodhams, Jacob L. Kerby, Valerie J. McKenzie, Catalina Murillo‐Cruz, Adrián A. Pinto‐Tomás
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2018.00729

Energy Gradients Structure Microbial Communities Across Sediment Horizons in Deep Marine Sediments of the South China Sea
Cited by: 15
Author(s): Michael F. Graw, Grace D’Angelo, Matthew Borchers, Andrew R. Thurber, Joel E. Johnson, Chuanlun Zhang, Haodong Liu, Frederick S. Colwell
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2021.584850

Highly Contaminated Marine Sediments Can Host Rare Bacterial Taxa Potentially Useful for Bioremediation
Cited by: 30
Author(s): Filippo Dell’Anno, Eugenio Rastelli, Michael Tangherlini, Cinzia Corinaldesi, Clementina Sansone, Christophe Brunet, Sergio Balzano, Adrianna Ianora, Luigi Musco, Maria Rita Montereali, Antonio Dell’Anno
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.00120

Distinct Types of Gut Microbiota Dysbiosis in Hospitalized Gastroenterological Patients Are Disease Non-related and Characterized With the Predominance of Either Enterobacteriaceae or Enterococcus
Cited by: 19
Author(s): Aleksander Mahnič, Martin Breskvar, Sašo Džeroski, Pavel Skok, Špela Pintar, Maja Rupnik
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.656656

Build Your Own Mushroom Soil: Microbiota Succession and Nutritional Accumulation in Semi-Synthetic Substratum Drive the Fructification of a Soil-Saprotrophic Morel
Cited by: 21
Author(s): Hao Tan, Yang Yu, Jie Tang, Tianhai Liu, Renyun Miao, Huang ZhongQian, Francis Martin, Weihong Peng
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2015.00193

Stable microbial community composition on the Greenland Ice Sheet
Cited by: 53
Author(s): Michaela Musilova, Martyn Tranter, Sarah A. Bennett, Jemma L. Wadham, Alexandre M. Anesio
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2019.02858

Intestinal Pioneer Colonizers as Drivers of Ileal Microbial Composition and Diversity of Broiler Chickens
Cited by: 27
Author(s): Denise Russi Rodrigues, Emily Winson, Kim Wilson, W.N. Briggs, Audrey F. Duff, K.M. Chasser, Lisa R. Bielke
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.726483

Metataxonomic Analysis of Grape Microbiota During Wine Fermentation Reveals the Distinction of Cyprus Regional terroirs
Cited by: 11
Author(s): Eleni Kamilari, Minas A. Mina, Christos Karallis, Dimitrios Tsaltas
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2020.00891

Comparing Gut Microbiome in Mothers’ Own Breast Milk- and Formula-Fed Moderate-Late Preterm Infants
Cited by: 24
Author(s): Ziyi Wang, Achal Neupane, Richard Vo, Jessica White, Xiuqing Wang, Shin-Yi Lee Marzano
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2021.718884

Mucosal Microbiota and Metabolome in the Ileum of Hu Sheep Offered a Low-Grain, Pelleted or Non-pelleted High-Grain Diet
Cited by: 3
Author(s): Ruiyang Zhang, Zhiqiang Zhong, Huiting Ma, Limei Lin, Fei Xie, Shengyong Mao, David M. Irwin, Zhe Wang, Shuyi Zhang
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2021.678012

Massive Survey on Bacterial–Bacteriophages Biodiversity and Quality of Natural Whey Starter Cultures in Trentingrana Cheese Production
Cited by: 5
Author(s): Mancini Am, Maria Cid Rodriguez, Miriam Zago, Nicola Cologna, Andrea Goss, Ilaria Carafa, Kieran Tuohy, Andrea Merz, Elena Franciosi
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.541583

Forest Microhabitat Affects Succession of Fungal Communities on Decomposing Fine Tree Roots
Cited by: 11
Author(s): Petr Kohout, Radka Sudová, Vendula Brabcová, Stanislav Vosolsobě, Petr Baldrián, Jana Albrechtová
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.00153

Microbial and Viral Communities and Their Antibiotic Resistance Genes Throughout a Hospital Wastewater Treatment System
Cited by: 54
Author(s): Morgan Petrovich, Adi Zilberman, Aviv Kaplan, Gefen R. Eliraz, Yübo Wang, Kathryn Langenfeld, Melissa B. Duhaime, Krista Wigginton, Rachel Poretsky, Dror Avisar, George F. Wells
Software Mentions: 1
Published: over 6 years ago

10.3389/fnut.2018.00028

Gut Microbiome Composition in Non-human Primates Consuming a Western or Mediterranean Diet
Cited by: 107
Author(s): Ravinder Nagpal, Carol A. Shively, Susan A Appt, Thomas C. Register, Kristofer T. Michalson, Mara Z. Vitolins, Hariom Yadav
Software Mentions: 1
Published: over 8 years ago

10.3389/fnut.2020.615003

Metabolic and Gut Microbiota Responses to Sourdough Pasta Consumption in Overweight and Obese Adults
Cited by: 4
Author(s): Saleh Shah, Paul D. Brown, Shyamchand Mayengbam, Michael G. Gänzle, Weilan Wang, Chunlong Mu, Silvio Lettrari, Craig Bertagnolli, Jane Shearer
Software Mentions: 1
Published: over 5 years ago

10.3389/fnut.2019.00120

Early-Life Iron Deficiency and Subsequent Repletion Alters Development of the Colonic Microbiota in the Pig
Cited by: 14
Author(s): Laura C. Knight, Mei Wang, Sharon M. Donovan, Ryan N. Dilger
Software Mentions: 1
Published: about 7 years ago

10.3389/fnut.2021.705763

Probiotic Effects of Lactobacillus fermentum ZJUIDS06 and Lactobacillus plantarum ZY08 on Hypercholesteremic Golden Hamsters
Cited by: 22
Author(s): Dongting Yang, Wentao Lyu, Zhengqiang Hu, Jiting Gao, Zhiyao Zheng, Weijun Wang, Jenni Firrman, Dawei Ren
Software Mentions: 1
Published: about 5 years ago

10.3389/fonc.2021.614448

Dysbiosis of Oral Microbiota During Oral Squamous Cell Carcinoma Development
Cited by: 43
Author(s): Purandar Sarkar, Samaresh Malik, Sayantan Laha, Shantanab Das, Soumya Bunk, Jharna Ray, Raghunath Chatterjee, Abhik Saha
Software Mentions: 1
Published: over 5 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

Bonuses:

Penalties:

Papers Mentioning PERMANOVA 6,292