Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: PERMANOVA

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
2 versions
Latest release: about 3 years ago
299 downloads last month

Papers Mentioning PERMANOVA 6,292

10.1002/fsn3.1106
Pomegranate peel extract alters the microbiome in mice and dysbiosis caused by <i>Citrobacter rodentium</i> infection
Cited by: 25
Author(s): Nadja S. George, Lumei Cheung, Devanand L. Luthria, Mónica Santı́n, Harry Dawson, Arvind A. Bhagwat, Allen Smith
Software Mentions: 1
Published: over 5 years ago
10.1093/femsec/fiaa212
Supplemental selenium source on gut health: insights on fecal microbiome and fermentation products of growing puppies
Cited by: 27
Author(s): Ana Margarida Pereira, Carlo Pinna, Giacomo Biagi, Claudio Stefanelli, Margarida R.G. Maia, Elisabete Matos, Marcela A. Segundo, António J.M. Fonseca, Ana R.J. Cabrita
Software Mentions: 1
Published: about 4 years ago
10.1186/s40104-021-00553-7
Hydroxychloride trace minerals have a positive effect on growth performance, carcass quality and impact ileal and cecal microbiota in broiler chickens
Cited by: 6
Author(s): Sandra van Kuijk, Yanming Han, A. I. García-Ruiz, Ana Rodiles
Software Mentions: 1
Published: over 3 years ago
10.1186/s40104-021-00571-5
Dietary supplementation of dried plum: a novel strategy to mitigate heat stress in broiler chickens
Cited by: 19
Author(s): S. S. Wasti, Nirvay Sah, Amit Kumar Singh, Chin N. Lee, Rajesh Jha
Software Mentions: 1
Published: over 3 years ago
10.1093/femsec/fiv129
16S rRNA assessment of the influence of shading on early-successional biofilms in experimental streams
Cited by: 3
Author(s): Katja Lehmann, Andrew C. Singer, Michael J. Bowes, Nicola L. Ings, Dawn Field, Thomas Bell
Software Mentions: 1
Published: about 9 years ago
10.1002/2211-5463.13193
Profiling of gut microbial dysbiosis in adults with myeloid leukemia
Cited by: 9
Author(s): Dandan Yu, Xinhua Yu, Aifang Ye, Chi Xu, Xiaolong Li, Geng Wang, Li Zhu
Software Mentions: 1
Published: over 3 years ago
10.1186/s40104-021-00614-x
Specific inhibition of Streptococcus bovis by endolysin LyJH307 supplementation shifts the rumen microbiota and metabolic pathways related to carbohydrate metabolism
Cited by: 8
Author(s): Hanbeen Kim, Tansol Park, Inhyuk Kwon, Jakyeom Seo
Software Mentions: 1
Published: over 3 years ago
10.1002/2211-5463.12590
Rapid bacterial identification by direct PCR amplification of 16S rRNA genes using the MinION™ nanopore sequencer
Cited by: 81
Author(s): Shinichi Kai, Yoshiyuki Matsuo, So Nakagawa, Kirill Kryukov, Shino Matsukawa, Hiromasa Tanaka, Teppei Iwai, Tadashi Imanishi, Kiichi Hirota
Software Mentions: 1
Published: almost 6 years ago
10.1007/s13353-020-00575-3
Characterizing the fecal bacteria and archaea community of heifers and lactating cows through 16S rRNA next-generation sequencing
Cited by: 13
Author(s): Filippo Cendron, Giovanni Niero, Gabriele Carlino, M. Penasa, Martino Cassandro
Software Mentions: 1
Published: about 4 years ago
10.3390/nu13062107
Habitual Dietary Intake Affects the Altered Pattern of Gut Microbiome by Acarbose in Patients with Type 2 Diabetes
Cited by: 13
Author(s): Fumie Takewaki, Harushi Nakajima, Daiki Takewaki, Yoshitaka Hashimoto, Susumu Majima, Hiroshi Okada, Takafumi Senmaru, Emi Ushigome, Masahide Hamaguchi, Masahiro Yamazaki, Yoshiki Tanaka, Shunji Nakajima, Hiroshi Ohno, Michiaki Fukui
Software Mentions: 1
Published: over 3 years ago
10.1111/jbi.12913
Biogeography and molecular diversity of coral symbionts in the genus <i>Symbiodinium</i> around the Arabian Peninsula
Cited by: 114
Author(s): Maren Ziegler, Chatchanit Arif, John A. Burt, Sergey Dobretsov, Cornelia Roder, Todd C. LaJeunesse, Christian R. Voolstra
Software Mentions: 1
Published: almost 8 years ago
10.12688/f1000research.3-34.v1
Genetic and environmental determinants of insect herbivore community structure in a Betula pendula population
Cited by: 9
Author(s): Tarja Silfver, Matti Rousi, Elina Oksanen, Heikki Roininen
Software Mentions: 1
Published: almost 11 years ago
10.1186/2241-5793-21-10
Benthic molluscan macrofauna structure in heavily trawled sediments (Thermaikos Gulf, North Aegean Sea): spatiotemporal patterns
Cited by: 7
Author(s): Charalampos Dimitriadis, Drosos Koutsoubas, Zoi Garyfalou, Α. Τσελεπίδης
Software Mentions: 1
Published: over 10 years ago
10.1186/s40709-018-0084-4
Differences in trophic resources and niches of two juvenile predatory species in three Pangani estuarine zones, Tanzania: stomach contents and stable isotope approaches
Cited by: 1
Author(s): Alistidia Paul Mwijage, Daniel Abel Shilla, John F. Machiwa
Software Mentions: 1
Published: over 6 years ago
10.7150/jca.43561
High Fat High Calories Diet (HFD) Increase Gut Susceptibility to Carcinogens by Altering the Gut Microbial Community
Cited by: 17
Author(s): Hei-Ying Jin, Chunxia Zhang
Software Mentions: 1
Published: almost 5 years ago
10.1186/s40662-021-00228-4
Strain heterogeneity, cooccurrence network, taxonomic composition and functional profile of the healthy ocular surface microbiome
Cited by: 11
Author(s): Yutong Kang, Shudan Lin, Xueli Ma, Yanlin Che, Yi‐Ju Chen, Tian Wan, Die Zhang, Jiao Shao, Jie Xu, Yi Xu, Yongliang Lou, Meiqin Zheng
Software Mentions: 1
Published: over 3 years ago
10.7717/peerj.8363
Osmotrophic glucose and leucine assimilation and its impact on EPA and DHA content in algae
Cited by: 3
Author(s): Elina Peltomaa, Sami J. Taipale
Software Mentions: 1
Published: almost 5 years ago
10.1111/jcmm.16157
Complement C5 activation promotes type 2 diabetic kidney disease via activating STAT3 pathway and disrupting the gut‐kidney axis
Cited by: 25
Author(s): Ling Li, Tiantian Wei, Shuyun Liu, Chengshi Wang, Meng Zhao, Yanhuan Feng, Liang Ma, Yanrong Liu, Ping Fu, Jingping Liu
Software Mentions: 1
Published: almost 4 years ago
10.1007/s10886-017-0821-4
Alarm Pheromone Composition and Behavioral Activity in Fungus-Growing Ants
Cited by: 18
Author(s): Victoria C Norman, Thomas M. Butterfield, Falko P. Drijfhout, Kiah Tasman, William O. Hughes
Software Mentions: 1
Published: over 7 years ago
10.1111/eva.12477
Selection by higher‐order effects of salinity and bacteria on early life‐stages of Western Baltic spring‐spawning herring
Cited by: 9
Author(s): Maude Poirier, Luisa Listmann, Olivia Roth
Software Mentions: 1
Published: over 7 years ago
10.7717/peerj.6512
The role of juvenile hormone in regulating reproductive physiology and dominance in <i>Dinoponera quadriceps</i> ants
Cited by: 8
Author(s): Victoria C Norman, Tobias Pamminger, Fábio Santos do Nascimento, William O. Hughes
Software Mentions: 1
Published: over 5 years ago
10.1111/eva.12203
Genes predict long distance migration and large body size in a migratory fish, Pacific lamprey
Cited by: 41
Author(s): Jon E. Hess, Christopher C. Caudill, Matthew L. Keefer, Brian McIlraith, Mary L. Moser, Shawn R. Narum
Software Mentions: 1
Published: about 10 years ago
10.1186/s13227-019-0119-4
The role of the hyaline spheres in sea cucumber metamorphosis: lipid storage via transport cells in the blastocoel
Cited by: 12
Author(s): Josefina Peters-Didier, Mary A. Sewell
Software Mentions: 1
Published: over 5 years ago
10.1155/2021/5584247
Effect of Acupuncture on Gut-Brain Axis Parameters in Patients with Atopic Dermatitis: A Study Protocol for a Randomized, Participant- and Assessor-Blind, Sham-Controlled Trial
Cited by: 0
Author(s): Jundong Kim, Soon Kyeong Kwon, In Seon Lee, Mijung Yeom, Dae Hyun Hahm, Hi-Joon Park, Kyuseok Kim
Software Mentions: 1
Published: about 3 years ago
10.7717/peerj.9185
Coral cover and rubble cryptofauna abundance and diversity at outplanted reefs in Okinawa, Japan
Cited by: 6
Author(s): Piera Biondi, Giovanni Diego Masucci, James Davis Reimer
Software Mentions: 1
Published: about 4 years ago
10.3164/jcbn.18-116
Green tea polyphenol (epigallocatechin-3-gallate) improves gut dysbiosis and serum bile acids dysregulation in high-fat diet-fed mice
Cited by: 89
Author(s): Chihiro Ushiroda, Yuji Naito, Tomohisa Takagi, Kazuhiko Uchiyama, Katsura Mizushima, Yasuki Higashimura, Zenta Yasukawa, Tsutomu Ōkubo, Ryo Inoüe, Akira Honda, Yasushi Matsuzaki, Yoshito Itoh
Software Mentions: 1
Published: almost 6 years ago
10.7717/peerj.1985
The interplay between habitat structure and chemical contaminants on biotic responses of benthic organisms
Cited by: 17
Author(s): Mariana Mayer‐Pinto, Miguel G. Matias, Ross A. Coleman
Software Mentions: 1
Published: over 8 years ago
10.3164/jcbn.20-53
Characterizing the gut microbiota in females with infertility and preliminary results of a water-soluble dietary fiber intervention study
Cited by: 19
Author(s): Shinnosuke Komiya, Yuji Naito, Hidetaka Okada, Yoshiyuki Matsuo, Kiichi Hirota, Tomohisa Takagi, Katsura Mizushima, Ryo Inoüe, Aya Abe, Yoshiharu Morimoto
Software Mentions: 1
Published: almost 5 years ago
10.1155/2021/4602612
The Herbal Formula Granule Prescription Mahuang Decoction Ameliorated Chronic Kidney Disease Which Was Associated with Restoration of Dysbiosis of Intestinal Microbiota in Rats
Cited by: 5
Author(s): Ming Yao, Sijing Cheng, Wuqiang Long, Hong‐Lian Wang, Chuanlan Xu, Xiaoyu Liu, Qiong Zhang, Sha Zhao, Xia Zou, Jianhui Fan, Li Wang, Hongchun Shen
Software Mentions: 1
Published: over 3 years ago
10.1172/JCI133605
Gut microbiome communication with bone marrow regulates susceptibility to amebiasis
Cited by: 18
Author(s): Stacey L. Burgess, Jhansi L. Leslie, Uddin Mj, Noah Oakland, Carol A. Gilchrist, G. Brett Moreau, Kôji Watanabe, Mahmoud Saleh, Morgan Simpson, Brandon A. Thompson, David T. Auble, Stephen D. Turner, Natasa Giallourou, Jonathan R. Swann, Zhen Pu, Z. Jennie, Rashidul Haque, William A. Petri
Software Mentions: 1
Published: over 4 years ago
10.3390/jcm7090282
Association between Cigarette Smoking Status and Composition of Gut Microbiota: Population-Based Cross-Sectional Study
Cited by: 160
Author(s): Su Hwan Lee, Yeojun Yun, Soo Jung Kim, Eun‐Ju Lee, Yoosoo Chang, Seungho Ryu, Hocheol Shin, Hyung-Lae Kim, Hanna Kim, Jin Hwa Lee
Software Mentions: 1
Published: about 6 years ago
10.3390/jcm8010079
The Impact of Cholecystectomy on the Gut Microbiota: A Case-Control Study
Cited by: 41
Author(s): Won Jae Yoon, Hanna Kim, Eunkyo Park, Seungho Ryu, Yoosoo Chang, Hocheol Shin, Hyung-Lae Kim, Sun Young Yi
Software Mentions: 1
Published: almost 6 years ago
10.1128/mSphere.00084-21
Matrix Effects on the Delivery Efficacy of Bifidobacterium animalis subsp. <i>lactis</i> BB-12 on Fecal Microbiota, Gut Transit Time, and Short-Chain Fatty Acids in Healthy Young Adults
Cited by: 7
Author(s): Zhaoyong Ba, Yujin Lee, Huicui Meng, Penny M. Kris-Etherton, Connie J. Rogers, Zachery T. Lewis, David A. Mills, Emily J. Furumoto, M. Laura Rolon, Jennifer Fleming, Robert F. Roberts
Software Mentions: 1
Published: about 3 years ago
10.1007/s00394-019-02036-y
Long-term Paleolithic diet is associated with lower resistant starch intake, different gut microbiota composition and increased serum TMAO concentrations
Cited by: 53
Author(s): Angela Genoni, Claus T. Christophersen, Johnny Lo, Megan L. Coghlan, Mary C. Boyce, Anthony R. Bird, Philippa Lyons‐Wall, Amanda Devine
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-017-08427-7
Effects of latitude and depth on the beta diversity of New Zealand fish communities
Cited by: 26
Author(s): Vincent Zintzen, Marti J. Anderson, Clive D. Roberts, Euan S. Harvey, Andrew L. Stewart
Software Mentions: 1
Published: over 7 years ago
10.1021/acs.est.0c07805
Severe Toxic Effects on Pelagic Copepods from Maritime Exhaust Gas Scrubber Effluents
Cited by: 16
Author(s): Peter Thor, Maria Granberg, Hulda Winnes, Kerstin Magnusson
Software Mentions: 1
Published: over 3 years ago
10.1007/s11356-017-8851-6
Response of marine benthic fauna to thin-layer capping with activated carbon in a large-scale field experiment in the Grenland fjords, Norway
Cited by: 18
Author(s): Göran Samuelsson, Caroline Raymond, Stefan Agrenius, Morten Schaanning, Gerard Cornelissen, Jonas S. Gunnarsson
Software Mentions: 1
Published: over 7 years ago
10.7717/peerj.7296
Grazing effects on woody and herbaceous plant biodiversity on a limestone mountain in northern Tunisia
Cited by: 4
Author(s): David Anthony Kirk, Katherine Hébert, F. B. Goldsmith
Software Mentions: 1
Published: over 5 years ago
10.1128/mSphere.00283-21
Gut Microbiome and Serum Metabolome Alterations Associated with Isolated Dystonia
Cited by: 7
Author(s): Lingyan Ma, Jing Keng, Min Cheng, Hua Pan, Bo Feng, Yongfeng Hu, Tao Feng, Fan Yang
Software Mentions: 1
Published: about 3 years ago
10.1038/s41598-017-09281-3
Fungal community assemblage of different soil compartments in mangrove ecosystem
Cited by: 30
Author(s): Dinesh Sanka Loganathachetti, Anbu Poosakkannu, Muthuraman Sundararaman
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-017-08161-0
A biomechanical approach to understand the ecomorphological relationship between primate mandibles and diet
Cited by: 22
Author(s): Jordi Marcè-Nogué, Thomas A. Püschel, Thomas M. Kaiser
Software Mentions: 1
Published: over 7 years ago
10.1007/s11356-015-5049-7
Seagrass vegetation and meiofauna enhance the bacterial abundance in the Baltic Sea sediments (Puck Bay)
Cited by: 13
Author(s): Emilia Jankowska, Katarzyna Jankowska, Maria Włodarska‐Kowalczuk
Software Mentions: 1
Published: over 9 years ago
10.1038/s41598-017-10494-9
Temporal Stability and Composition of the Ocular Surface Microbiome
Cited by: 152
Author(s): Jerome Ozkan, Shaun Nielsen, Cristina Díez‐Vives, Minas T. Coroneo, Torsten Thomas, Mark Willcox
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-09844-4
Comparison of vaginal microbiota sampling techniques: cytobrush versus swab
Cited by: 21
Author(s): Anita Mitra, David A. MacIntyre, Vishakha Mahajan, Yun Sok Lee, Ann Smith, Julian R. Marchesi, Deirdre Lyons, Phillip R. Bennett, Maria Kyrgiou
Software Mentions: 1
Published: about 7 years ago
10.1007/s11356-017-8377-y
Microbial changes linked to the accelerated degradation of the herbicide atrazine in a range of temperate soils
Cited by: 28
Author(s): Rachel Louise Yale, Melanie Sapp, Chris Sinclair, James Moir
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-017-10231-2
Microbial communities in marine sediments modify success of an invasive macrophyte
Cited by: 32
Author(s): Paul E. Gribben, Shaun Nielsen, Justin R. Seymour, Daniel Bradley, Matthew N. West, Torsten Thomas
Software Mentions: 1
Published: about 7 years ago
10.1007/s11356-020-11607-0
Impaired benthic macrofauna function 4 years after sediment capping with activated carbon in the Grenland fjords, Norway
Cited by: 4
Author(s): Caroline Raymond, Göran Samuelsson, Stefan Agrenius, Morten Schaanning, Jonas S. Gunnarsson
Software Mentions: 1
Published: almost 4 years ago
10.1039/d0en00883d
Environmentally relevant concentrations of titanium dioxide nanoparticles pose negligible risk to marine microbes
Cited by: 24
Author(s): Craig J. Dedman, Aaron A. King, Joseph Alexander Christie-Oleza, G. R. Davies
Software Mentions: 1
Published: almost 4 years ago
10.7717/peerj.5353
Occurrence of virulent multidrug-resistant<i>Enterococcus faecalis</i>and<i>Enterococcus faecium</i>in the pigs, farmers and farm environments in Malaysia
Cited by: 21
Author(s): Shiang Chiet Tan, Chun Wie Chong, Cindy Shuan Ju Teh, Peck Toung Ooi, Kwai Lin Thong
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-017-09973-w
Ecological and functional adaptations to water management in a semiarid agroecosystem: a soil metaproteomics approach
Cited by: 33
Author(s): Robert M. Starke, Felipe Bastida, J. Abadía, Carlos Garcı́a, Emilio Nicolás, Nico Jehmlich
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-10818-9
Applications of unmanned aerial vehicles in intertidal reef monitoring
Cited by: 84
Author(s): Sarah L. Murfitt, Blake M. Allan, Alecia Bellgrove, Alex Rattray, Mary Young, Daniel Ierodiaconou
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-10834-9
Aging-related changes in the diversity of women’s skin microbiomes associated with oral bacteria
Cited by: 122
Author(s): Nakako Shibagaki, Wataru Suda, Cécile Clavaud, Philippe Bastien, Lena Takayasu, Erica Iioka, Rina Kurokawa, Naoko Yamashita, Yasue Hattori, Chie Shindo, Lionel Breton, Masahira Hattori
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-11069-4
Gender-based differences in host behavior and gut microbiota composition in response to high fat diet and stress in a mouse model
Cited by: 93
Author(s): Laura C. Bridgewater, Chenhong Zhang, Yanqiu Wu, Weiwei Hu, Qianpeng Zhang, Jing Wang, Shengtian Li, Liping Zhao
Software Mentions: 1
Published: about 7 years ago
10.1128/mSphere.00130-21
Local Network Properties of Soil and Rhizosphere Microbial Communities in Potato Plantations Treated with a Biological Product Are Important Predictors of Crop Yield
Cited by: 2
Author(s): Nabeel Imam, Ignacio Belda, Beatriz García-Jiménez, Adrian J. Duehl, James R. Doroghazi, Daniel E. Almonacid, Varghese P. Thomas, Alberto Acedo
Software Mentions: 1
Published: about 3 years ago
10.1186/s40793-020-00362-x
Performance evaluation of high-volume electret filter air samplers in aerosol microbiome research
Cited by: 4
Author(s): Kari Oline Bøifot, Jostein Gohli, Gunnar Skogan, Marius Dybwad
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-017-11441-4
Introduced ascidians harbor highly diverse and host-specific symbiotic microbial assemblages
Cited by: 31
Author(s): James S. Evans, Patrick M. Erwin, Noa Shenkar, Susanna López‐Legentil
Software Mentions: 1
Published: about 7 years ago
10.1111/1758-2229.12115
Impacts of bioturbation on temporal variation in bacterial and archaeal nitrogen‐cycling gene abundance in coastal sediments
Cited by: 44
Author(s): Bonnie Laverock, Karen Tait, Jack A. Gilbert, A. Mark Osborn, Stephen Widdicombe
Software Mentions: 1
Published: about 11 years ago
10.7717/peerj.2505
The effect of CO<sub>2</sub>enrichment on net photosynthesis of the red alga<i>Furcellaria lumbricalis</i>in a brackish water environment
Cited by: 13
Author(s): Liina Pajusalu, Georg Martin, Tiina Paalme, Arno Põllumäe
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-017-11311-z
Dynamic oropharyngeal and faecal microbiota during treatment in infants hospitalized for bronchiolitis compared with age-matched healthy subjects
Cited by: 7
Author(s): Qian-Nan Hu, Wenkui Dai, Qian Zhou, Dan Fu, Yuejie Zheng, Wenjian Wang, Yanhong Liu, Qin Yang, De‐Zai Dai, Sixi Liu, Guosheng Liu, Shuai Cheng Li, Feiqiu Wen
Software Mentions: 1
Published: about 7 years ago
10.1111/1758-2229.12739
Ontogeny of symbiont community structure in two carotenoid‐rich, viviparous marine sponges: comparison of microbiomes and analysis of culturable pigmented heterotrophic bacteria
Cited by: 17
Author(s): Oriol Sacristán-Soriano, Marina Winkler, Patrick M. Erwin, Jeremy B. Weisz, Olivia Harriott, Gary E. Heussler, Emily A. Bauer, Brittany W. Marsden, Andrew P. Hill, Malcolm Hill
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-017-10956-0
Under-ice availability of phytoplankton lipids is key to freshwater zooplankton winter survival
Cited by: 58
Author(s): Guillaume Grosbois, Heather L. Mariash, Tobias Schneider, Milla Rautio
Software Mentions: 1
Published: about 7 years ago
10.1186/s40168-019-0646-1
Systemic translocation of Staphylococcus drives autoantibody production in HIV disease
Cited by: 21
Author(s): Zhenwu Luo, Min Li, Yongxia Wu, Zhefeng Meng, Lisa Martin, Lumin Zhang, Elizabeth Ogunrinde, Zejun Zhou, Shenghui Qin, Zhuang Wan, Maria Anna Julia Westerink, Stephanie Warth, Hui Liu, Ping Jin, David F. Stroncek, Quan-Zhen Li, Ena Wang, Xueling Wu, Sonya L. Heath, Zihai Li, Alexander V. Alekseyenko, Wei Jiang
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-017-12556-4
Potential effects of an invasive seaweed (Caulerpa cylindracea, Sonder) on sedimentary organic matter and microbial metabolic activities
Cited by: 32
Author(s): Lucia Rizzo, Antonio Pusceddu, Loredana Stabili, Pietro Alifano, Simonetta Fraschetti
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-11699-8
Microbiome profile of the amniotic fluid as a predictive biomarker of perinatal outcome
Cited by: 77
Author(s): Daichi Urushiyama, Wataru Suda, Eriko Ohnishi, Ryoko Araki, Chihiro Kiyoshima, Masamitsu Kurakazu, Ayako Sanui, Fusanori Yotsumoto, Mariko Murata, Kazuki Nabeshima, Shin’ichiro Yasunaga, Shigeru Saito, Makoto Nomiyama, Masahira Hattori, Shingo Miyamoto, Kenichiro Hata
Software Mentions: 1
Published: about 7 years ago
10.1111/1462-2920.14750
Dynamics of the Pacific oyster pathobiota during mortality episodes in Europe assessed by 16S rRNA gene profiling and a new target enrichment next‐generation sequencing strategy
Cited by: 46
Author(s): Aide Lasa, Andrea Di Cesare, Giovanni Tassistro, Alessio Borello, Stefano Gualdi, Dolors Furones, Noèlia Carrasco, Deborah Cheslett, Amanda Bréchon, Christine Paillard, Adeline Bidault, Fabrice Pernet, Laura Canesi, Paolo Edomi, Alberto Pallavicini, Carla Pruzzo, Luigi Vezzulli
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-017-12427-y
Pristine populations of habitat-forming gorgonian species on the Antarctic continental shelf
Cited by: 10
Author(s): Stefano Ambroso, Janire Salazar, Rebeca Zapata-Guardiola, Luisa Federwisch, Claudio Richter, Josep María Gili, Núria Teixidó
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-13393-1
Reproduction of an azooxanthellate coral is unaffected by ocean acidification
Cited by: 10
Author(s): Francesca Gizzi, Ludovica de Mas, Valentina Airi, Erik Caroselli, Fiorella Prada, Giuseppe Falini, Zvy Dubinsky, Stefano Goffredo
Software Mentions: 1
Published: about 7 years ago
10.1111/1462-2920.15337
Contrasting community assembly processes structure lotic bacteria metacommunities along the river continuum
Cited by: 33
Author(s): Hyun S. Gweon, Michael J. Bowes, Heather Moorhouse, Anna Oliver, Mark Bailey, M. Acreman, Daniel S. Read
Software Mentions: 1
Published: almost 4 years ago
10.1038/s41598-017-14223-0
Antibiotics ameliorate lupus-like symptoms in mice
Cited by: 86
Author(s): Qinghui Mu, Vincent J. Tavella, Jay Kirby, Thomas E. Cecere, Matthias Chung, Jiyoung Lee, Song Li, S. Ansar Ahmed, Kristin Eden, Irving C. Allen, Christopher M. Reilly, Xin Luo
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-13962-4
Interactions between seagrasses and seaweeds during surge nitrogen acquisition determine interspecific competition
Cited by: 12
Author(s): Ana Alexandre, Alexandra Baeta, Aschwin H. Engelen, Rui Santos
Software Mentions: 1
Published: about 7 years ago
10.1111/1462-2920.12886
Bacterial diversity along a 2600 km river continuum
Cited by: 226
Author(s): Domenico Savio, Lucas Sinclair, Umer Zeeshan Ijaz, J. Parajka, Georg H. Reischer, Philipp Stadler, Alfred Paul Blaschke, Günter Blöschl, Robert L. Mach, Alexander K. T. Kirschner, Andreas H. Farnleitner, Alexander Eiler
Software Mentions: 1
Published: over 9 years ago
10.1111/1462-2920.12913
Light availability affects stream biofilm bacterial community composition and function, but not diversity
Cited by: 40
Author(s): Karoline Wagner, Katharina Besemer, Nancy R. Burns, Tom J. Battin, Mia M. Bengtsson
Software Mentions: 1
Published: over 9 years ago
10.1128/mSystems.00117-16
Microbial Communities Are Well Adapted to Disturbances in Energy Input
Cited by: 26
Author(s): Nuria Fernández-González, J. A. Huber, Joseph J. Vallino
Software Mentions: 1
Published: about 8 years ago
10.1111/1462-2920.14801
Maternal versus artificial rearing shapes the rumen microbiome having minor long‐term physiological implications
Cited by: 32
Author(s): Alejandro Belanche, D. R. Yáñez-Ruíz, Andrew Detheridge, Gareth Griffith, Alison H. Kingston‐Smith, C. J. Newbold
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-017-13833-y
Identifying critical recruitment bottlenecks limiting seedling establishment in a degraded seagrass ecosystem
Cited by: 38
Author(s): John Statton, Leonardo Ruiz Montoya, Robert J. Orth, Kingsley W. Dixon, Gary A. Kendrick
Software Mentions: 1
Published: about 7 years ago
10.7717/peerj.12120
A cross-sectional study of the nasal and fecal microbiota of sows from different health status within six commercial swine farms
Cited by: 1
Author(s): Andréia G. Arruda, Loïc Deblais, Vanessa L. Hale, Christopher Madden, Monique D. Pairis‐Garcia, Vishal Srivastava, Dipak Kathayat, Anand Kumar, Gireesh Rajashekara
Software Mentions: 1
Published: about 3 years ago
10.1038/s41598-017-15122-0
Time-resolved analysis of a denitrifying bacterial community revealed a core microbiome responsible for the anaerobic degradation of quinoline
Cited by: 16
Author(s): Yun Wang, Hao Tian, Fei Huang, Wenmin Long, Qianpeng Zhang, Jing Wang, Ying Zhu, Xiaogang Wu, Guanzhou Chen, Liping Zhao, Lars R. Bakken, Åsa Frostegård, Xiaojun Zhang
Software Mentions: 1
Published: about 7 years ago
10.7717/peerj.5276
The influence of different deep-sea coral habitats on sediment macrofaunal community structure and function
Cited by: 12
Author(s): Jill R. Bourque, Amanda W.J. Demopoulos
Software Mentions: 1
Published: over 6 years ago
10.1111/1462-2920.14598
Emerging from the ice‐fungal communities are diverse and dynamic in earliest soil developmental stages of a receding glacier
Cited by: 29
Author(s): Philipp Dresch, Johannes Falbesoner, Chiara Ennemoser, Michaela Hittorf, Regina Kuhnert, Ursula Peintner
Software Mentions: 1
Published: over 5 years ago
10.1111/1462-2920.14327
Isotopic evidence of biotrophy and unusual nitrogen nutrition in soil‐dwelling Hygrophoraceae
Cited by: 17
Author(s): Hans Halbwachs, Gary L. Easton, Roland Bol, Erik A. Hobbie, Mark H. Garnett, Derek Peršoh, E. R. Dixon, Nicholas J. Ostle, Peter Karasch, Gareth Griffith
Software Mentions: 1
Published: about 6 years ago
10.1007/s10646-012-1003-3
Influence of dietary carbon on mercury bioaccumulation in streams of the Adirondack Mountains of New York and the Coastal Plain of South Carolina, USA
Cited by: 26
Author(s): Karen Riva-Murray, Paul M. Bradley, Lia C. Chasar, Daniel T. Button, Mark E. Brigham, Barbara C. Scudder Eikenberry, Celeste A. Journey, Michelle A. Lutz
Software Mentions: 1
Published: about 12 years ago
10.1038/s41598-017-15584-2
The Habitats Humans Provide: Factors affecting the diversity and composition of arthropods in houses
Cited by: 9
Author(s): Misha Leong, Matthew A. Bertone, Amy M. Savage, Keith M. Bayless, Robert R. Dunn, Michelle Trautwein
Software Mentions: 1
Published: about 7 years ago
10.1002/ecy.3226
High summer temperatures amplify functional differences between coral‐ and algae‐dominated reef communities
Cited by: 13
Author(s): Florian Roth, Nils Rädecker, Susana Carvalho, Carlos M. Duarte, Vincent Saderne, Andrea Antón, Luis Silva, María Ll. Calleja, Xosé Anxelu G. Morán, Christian R. Voolstra, Benjamin Kürten, Burton H. Jones, Christian Wild
Software Mentions: 1
Published: almost 4 years ago
10.3390/nu12103035
Ingestion of Helianthus tuberosus at Breakfast Rather Than at Dinner is More Effective for Suppressing Glucose Levels and Improving the Intestinal Microbiota in Older Adults
Cited by: 8
Author(s): Hyeon Ki Kim, Hanako Chijiki, Takuya Nanba, Mamiho Ozaki, Hiroyuki Sasaki, Masaki Takahashi, Shigenobu Shibata
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-017-16253-0
Copolymers enhance selective bacterial community colonization for potential root zone applications
Cited by: 8
Author(s): Vy Pham, P. Murugaraj, Falko Mathes, Bien Keem Tan, Vi Khanh Truong, Daniel V. Murphy, David E. Mainwaring
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-15988-0
Physicochemical characteristics and toxicity of surface-modified zinc oxide nanoparticles to freshwater and marine microalgae
Cited by: 38
Author(s): Mana Man Na Yung, Paul-Antoine Fougères, Yu Hang Leung, Fangzhou Liu, Aleksandra B. Djurišić, John P. Giesy, K. M. Leung
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-16289-2
Dysbiosis of the microbiome in gastric carcinogenesis
Cited by: 150
Author(s): Natalia Castaño‐Rodríguez, Khean‐Lee Goh, Kwong Ming Fock, Hazel M. Mitchell, Nadeem O. Kaakoush
Software Mentions: 1
Published: about 7 years ago
10.1002/ece3.6045
Vegetation structure and ground cover attributes describe the occurrence of a newly discovered carnivorous marsupial on the Tweed Shield Volcano caldera, the endangered black‐tailed dusky antechinus ( <i>Antechinus arktos</i> )
Cited by: 3
Author(s): Caitlin E. Riordan, Coral Pearce, Bill McDonald, Ian Gynther, Andrew Baker
Software Mentions: 1
Published: almost 5 years ago
10.1002/ece3.5366
Are <i>Drosophila</i> preferences for yeasts stable or contextual?
Cited by: 14
Author(s): Catrin S. Günther, Sarah Knight, Rhys Jones, Matthew R. Goddard
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-017-16753-z
CSA13 inhibits colitis-associated intestinal fibrosis via a formyl peptide receptor like-1 mediated HMG-CoA reductase pathway
Cited by: 10
Author(s): Chunlan Xu, Sally Ghali, Jiani Wang, David Q. Shih, Christina Ortiz, Caroline C. Mussatto, Elaine C. Lee, Diana Tran, Jonathan P. Jacobs, Venu Lagishetty, Phillip Fleshner, Lori Robbins, Michelle Vu, Tressia Hing, Dermot McGovern, Hon Wai Koon
Software Mentions: 1
Published: almost 7 years ago
10.1186/s40168-019-0747-x
A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals
Cited by: 96
Author(s): Petar Šćepanović, Flavia Hodel, Stanislas Mondot, Valentin Partula, Allyson L. Byrd, Christian Hammer, Cécile Alanio, Jacob Bergstedt, Étienne Patin, Mathilde Touvier, Olivier Lantz, Matthew L. Albert, Darragh Duffy, Lluı́s Quintana-Murci, Jacques Fellay
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-017-16341-1
Heatwaves diminish the survival of a subtidal gastropod through reduction in energy budget and depletion of energy reserves
Cited by: 40
Author(s): Jonathan Y.S. Leung, Sean D. Connell, Bayden D. Russell
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-18014-5
A gut pathobiont synergizes with the microbiota to instigate inflammatory disease marked by immunoreactivity against other symbionts but not itself
Cited by: 31
Author(s): João Carlos Gomes-Neto, Hatem Kittana, Sara Mantz, Rafael R. Segura Muñoz, Robert Schmaltz, Laure B. Bindels, Jennifer Clarke, Jesse M. Hostetter, Andrew K. Benson, Jens Walter, Amanda E. Ramer‐Tait
Software Mentions: 1
Published: almost 7 years ago
10.1002/ece3.2992
Ants as ecological indicators of rainforest restoration: Community convergence and the development of an Ant Forest Indicator Index in the Australian wet tropics
Cited by: 32
Author(s): Michael J. Lawes, Anthony M. Moore, Alan N. Andersen, Noel D. Preece, Donald C. Franklin
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-18218-9
Intraskeletal histovariability, allometric growth patterns, and their functional implications in bird-like dinosaurs
Cited by: 13
Author(s): Edina Prondvai, Pascal Godefroit, Dominique Adriaens, Daogong Hu
Software Mentions: 1
Published: almost 7 years ago
10.1002/ece3.7293
Dynamics of bird assemblages in response to temporally and spatially variable resources in arid Australia
Cited by: 3
Author(s): Bruce A. Pascoe, Chris R. Pavey, Stephen Morton, Christine A. Schlesinger
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-017-18904-8
An insight into intestinal mucosal microbiota disruption after stroke
Cited by: 93
Author(s): Dragana Stanley, Robert J. Moore, Connie Hoi Yee Wong
Software Mentions: 1
Published: almost 7 years ago
10.1016/j.csbj.2020.01.007
Co-occurrence patterns of bacteria within microbiome of Moscow subway
Cited by: 21
Author(s): Natalia Klimenko, Alexander V. Tyakht, Stepan V. Toshchakov, Margarita Shevchenko, Aleksei A. Korzhenkov, Ebrahim Afshinnekoo, Christopher E. Mason, Dmitry Alexeev
Software Mentions: 1
Published: almost 5 years ago
10.1038/s41598-017-19051-w
Effects of CO2 enrichment on benthic primary production and inorganic nitrogen fluxes in two coastal sediments
Cited by: 9
Author(s): Kay Vopel, Cintya Del-Río, Conrad A. Pilditch
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-017-17851-8
Comparative analyses of fecal microbiota in Chinese isolated Yao population, minority Zhuang and rural Han by 16sRNA sequencing
Cited by: 31
Author(s): Ming Liao, Yuanliang Xie, Yan Mao, Libing Zheng, Aihua Tan, Chunlei Wu, Zhifu Zhang, Yang Chen, Tianyu Li, Yu Ye, Ziting Yao, Yonghua Jiang, Hongzhe Li, Xiaoming Li, Xiaobo Yang, Qiuyan Wang, Zengnan Mo
Software Mentions: 1
Published: almost 7 years ago