cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.1093/aobpla/plt043

Banking on the past: seed banks as a reservoir for rare and native species in restored vernal pools
Cited by: 34
Author(s): Akasha M. Faist, Scott Ferrenberg, Sharon K. Collinge
Software Mentions: 1
Published: over 13 years ago

10.1093/aobpla/plu056

Belowground legacies of Pinus contorta invasion and removal result in multiple mechanisms of invasional meltdown
Cited by: 70
Author(s): Ian A. Dickie, Mark G. St. John, G. W. Yeates, Chris W. Morse, Karen I. Bonner, Kate H. Orwin, Duane A. Peltzer
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-017-02034-2

Ecological relevance of skeletal fatty acid concentration and composition in Mediterranean scleractinian corals
Cited by: 7
Author(s): Chiara Samorì, Erik Caroselli, Fiorella Prada, Michela Reggi, Simona Fermani, Zvy Dubinsky, Stefano Goffredo, Giuseppe Falini
Software Mentions: 1
Published: over 9 years ago

10.3390/microorganisms9081717

Effect of Methionine Supplementation on Rumen Microbiota, Fermentation, and Amino Acid Metabolism in In Vitro Cultures Containing Nitrate
Cited by: 10
Author(s): Faiz‐ul Hassan, Yanxia Guo, Mengwei Li, Zhengyi Tang, Lijuan Peng, Xin Liang, Chengjian Yang
Software Mentions: 1
Published: about 5 years ago

10.3390/antiox9070640

The Interaction between Mitochondrial Oxidative Stress and Gut Microbiota in the Cardiometabolic Consequences in Diet-Induced Obese Rats
Cited by: 23
Author(s): Adriana Ortega‐Hernández, Ernesto Martínez‐Martínez, Rubén Gómez-Gordo, Natalia López‐Andrés, Amaya Fernández‐Celis, Beatriz Gutiérrrez-Miranda, Marı́a Luisa Nieto, Teresa Alarcón, Claudio Alba, Dulcenombre Gómez-Garré, Victoria Cachofeiro
Software Mentions: 1
Published: about 6 years ago

10.1128/mSystems.01173-20

The Salivary Microbiota, Cytokines, and Metabolome in Patients with Ankylosing Spondylitis Are Altered and More Proinflammatory than Those in Healthy Controls
Cited by: 9
Author(s): Longxian Lv, Huiyong Jiang, Yan Ren, Danyi Xu, Kaicen Wang, Qiangqiang Wang, Xiaoxiao Chen, Lanjuan Li
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-017-01091-x

The response of a boreal deep-sea sponge holobiont to acute thermal stress
Cited by: 47
Author(s): Roger Strand, Steve W Whalan, Nicole S. Webster, Tina Kutti, James Kar‐Hei Fang, Heidi M. Luter, Raymond Bannister
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02782-1

Serum miRNA signature diagnoses and discriminates murine colitis subtypes and predicts ulcerative colitis in humans
Cited by: 28
Author(s): Émilie Viennois, Yuan Zhao, Moon Kwon Han, Bo Xiao, Mingzhen Zhang, Mahadev Prasad, Lixin Wang, Didier Merlin
Software Mentions: 1
Published: about 9 years ago

10.3390/microorganisms9010039

Lactobacillus iners and gasseri, Prevotella bivia and HPV Belong to the Microbiological Signature Negatively Affecting Human Reproduction
Cited by: 18
Author(s): Giuseppina Campisciano, Valerio Iebba, Gabriella Zito, Stefania Luppi, Monica Martinelli, Leo Fischer, Francesco De Seta, Giuseppe Basile, Giuseppe Ricci, Manola Comar
Software Mentions: 1
Published: over 5 years ago

10.1186/s13568-018-0599-y

Microbial community and diversity in the feces of Sichuan takin (Budorcas taxicolor tibetana) as revealed by Illumina Miseq sequencing and quantitative real-time PCR
Cited by: 4
Author(s): Hongxiang Zhu, Dong Zeng, Ning Wang, Lili Niu, Yi Zhou, Yan Zeng, Xueqin Ni
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms7120610

Modulation of Gut Microbiota by Glucosamine and Chondroitin in a Randomized, Double-Blind Pilot Trial in Humans
Cited by: 8
Author(s): Sandi L. Navarro, Lisa Levy, Keith R. Curtis, Johanna W. Lampe, Meredith A.J. Hullar
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-03282-y

Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N2O formation
Cited by: 48
Author(s): Johannes Harter, Mohamed El-Hadidi, Daniel H. Huson, Andreas Kappler, Sebastian Behrens
Software Mentions: 1
Published: about 9 years ago

10.1002/mbo3.1129

Multiple plasmid origin‐of‐transfer regions might aid the spread of antimicrobial resistance to human pathogens
Cited by: 6
Author(s): Jan Zrimec
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-03889-1

Influences of temperature and salinity on physicochemical properties and toxicity of zinc oxide nanoparticles to the marine diatom Thalassiosira pseudonana
Cited by: 41
Author(s): Mana Man Na Yung, Kevin W.H. Kwok, Aleksandra B. Djurišić, John P. Giesy, Kenneth M.Y. Leung
Software Mentions: 1
Published: about 9 years ago

10.1186/s13756-021-00915-w

Investigating potential transmission of antimicrobial resistance in an open-plan hospital ward: a cross-sectional metagenomic study of resistome dispersion in a lower middle-income setting
Cited by: 1
Author(s): Anushia Ashokan, Josh Hanson, Ne Myo Aung, Mar Mar Kyi, Steven Taylor, Jocelyn M. Choo, Erin Flynn, Fredrick M. Mobegi, Morgyn S. Warner, Steve Wesselingh, Mark Boyd, Geraint B. Rogers
Software Mentions: 1
Published: over 5 years ago

10.1002/mbo3.253

Spatial distribution of marine airborne bacterial communities
Cited by: 51
Author(s): Jasmin Sabrina Seifried, Antje Wichels, Gunnar Gerdts
Software Mentions: 1
Published: over 11 years ago

10.1002/mbo3.716

Microbial effects of livestock manure fertilization on freshwater aquaculture ponds rearing tilapia (Oreochromis shiranus) and North African catfish (Clarias gariepinus)
Cited by: 18
Author(s): Jeremiah J. Minich, Quanyin Zhu, Zhenjiang Zech Xu, Amir Almasi‐Hashiani, Maxon Ngochera, Moses Simwaka, Eric E. Allen, Hastings Zidana, Rob Knight
Software Mentions: 1
Published: almost 8 years ago

10.1128/mSystems.01300-20

Early-Life Immune System Maturation in Chickens Using a Synthetic Community of Cultured Gut Bacteria
Cited by: 60
Author(s): Christian Zenner, Thomas C. A. Hitch, Thomas Riedel, Esther Wortmann, Stefan Tiede, Eva Miriam Buhl, Birte Abt, Klaus Neuhaus, Philippe Velge, Jörg Overmann, Bernd Kaspers, Thomas Clavel
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-017-05220-4

Regional and local environmental conditions do not shape the response to warming of a marine habitat-forming species
Cited by: 23
Author(s): Carolina Crisci, J. B. Ledoux, Kenza Mokhtar-Jamaï, Marc Bally, Nathaniel Bensoussan, Didier Aurelle, Emma Cebrián, Rafael Coma, Jean‐Pierre Féral, Marie Rivière, Cristina Linares, Paula López‐Sendino, Christian Marschal, Marta Ribes, Núria Teixidó, Frédéric Zuberer, Joaquim Garrabou
Software Mentions: 1
Published: about 9 years ago

10.1128/AAC.01395-19

Multiple-Ascending-Dose Phase 1 Clinical Study of the Safety, Tolerability, and Pharmacokinetics of CRS3123, a Narrow-Spectrum Agent with Minimal Disruption of Normal Gut Microbiota
Cited by: 11
Author(s): Barbara Lomeli, Hal Galbraith, Jared Schettler, George A. Saviolakis, Wael Elamin, Blaire L. Osborn, Jacques Ravel, Keith Z. Hazleton, Catherine Lozupone, Ronald J. Evans, Stacie Bell, Urs A. Ochsner, Thale C. Jarvis, Shahida Baqar, Nebojša Janjić
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-05251-x

Effects of combined dredging-related stressors on sponges: a laboratory approach using realistic scenarios
Cited by: 15
Author(s): Mari Carmen Pineda, Brian Strehlow, Jasmine Kamp, Alan Duckworth, Ross Jones, Nicole S. Webster
Software Mentions: 1
Published: about 9 years ago

10.1002/mbo3.1132

Bacterioplankton response to nitrogen and dissolved organic matter produced from salmon mucus
Cited by: 10
Author(s): Verónica Molina, Camila Fernández
Software Mentions: 1
Published: over 5 years ago

10.1002/mbo3.693

Characteristics of microbial communities and intestinal pathogenic bacteria for migrated Larus ridibundus in southwest China
Cited by: 11
Author(s): Feng Li, Wenpeng Gu, Duo Li, Junrong Liang, Xiaoqing Fu, Wen Xu, Ran Duan, Xin Wang, Huaiqi Jing, Jiejie Dai
Software Mentions: 1
Published: about 8 years ago

10.1002/mbo3.425

Investigation of the microbial communities colonizing prepainted steel used for roofing and walling
Cited by: 3
Author(s): Tran T. Huynh, Ili Jamil, Nicole A. Pianegonda, Stephen J. Blanksby, Philip Barker, Michael Manefield, Scott A. Rice
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-02516-3

Comparison of DNA-, PMA-, and RNA-based 16S rRNA Illumina sequencing for detection of live bacteria in water
Cited by: 94
Author(s): Ru Li, Hein Min Tun, Musarrat Jahan, Zhengxiao Zhang, Ayush Kumar, W. G. Dilantha Fernando, Annemieke Farenhorst, Ehsan Khafipour
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-06013-5

Assessment of different techniques for 3D superimposition of serial digital maxillary dental casts on palatal structures
Cited by: 63
Author(s): Georgios Vasilakos, Roman Schilling, Demetrios J. Halazonetis, Nikolaos Gkantidis
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-06394-7

Threats to large brown algal forests in temperate seas: the overlooked role of native herbivorous fish
Cited by: 46
Author(s): Fabrizio Gianni, Fabrizio Bartolini, Alexis Pey, Mathieu Laurent, Gustavo M. Martins, Laura Airoldi, Luisa Mangialajo
Software Mentions: 1
Published: about 9 years ago

10.3390/antibiotics10040352

Characterization of Environmental and Cultivable Antibiotic-Resistant Microbial Communities Associated with Wastewater Treatment
Cited by: 4
Author(s): Alicia Sorgen, James E. Johnson, Kevin Lambirth, Sandra M. Clinton, Molly C. Redmond, Anthony A. Fodor, Cynthia Gibas
Software Mentions: 1
Published: over 5 years ago

10.1002/mbo3.1046

Long‐term stability of microbiome diversity and composition in fecal samples stored in eNAT medium
Cited by: 7
Author(s): Rebecca Young, Kirsten Jenkins, Félix Araújo-Pérez, Patrick C. Seed, Matthew S. Kelly
Software Mentions: 1
Published: over 6 years ago

10.1002/mbo3.1050

Impact of host intraspecies genetic variation, diet, and age on bacterial and fungal intestinal microbiota in tigers
Cited by: 17
Author(s): Haiying Jiang, Caihong Wu, Lei Su, Mu-Shun Huang, Li-Bo Lin, Shan Qiao, Guanyu Li, Hafiz Ishfaq Ahmad, Linmiao Li, Xiujuan Zhang, Huiming Li, Jinping Chen
Software Mentions: 1
Published: over 6 years ago

10.1002/mbo3.936

Low‐calcium diet in mice leads to reduced gut colonization by Enterococcus faecium
Cited by: 2
Author(s): Janetta Top, Antoni P. A. Hendrickx, Marleen T. J. van Ampting, Kees van Limpt, Jan Knol, Denise van de Kamer, Johanna C. Braat, Marco C. Viveen, Malbert R. C. Rogers, Hans Kemperman, Rob J. L. Willems, Fernanda L. Paganelli
Software Mentions: 1
Published: almost 7 years ago

10.1002/mbo3.216

DNA extraction protocols cause differences in 16S rRNA amplicon sequencing efficiency but not in community profile composition or structure
Cited by: 84
Author(s): Benjamin E. R. Rubin, Jon G. Sanders, Jarrad Hampton-Marcell, Sarah M. Owens, Jack A. Gilbert, Corrie S. Moreau
Software Mentions: 1
Published: almost 12 years ago

10.3390/antibiotics10030269

Allium Extract Implements Weaned Piglet’s Productive Parameters by Modulating Distal Gut Microbiota
Cited by: 15
Author(s): Miguel Rabelo-Ruiz, Claudia Teso-Pérez, Juan Manuel Peralta‐Sánchez, Juan José Ariza, Antonio Manuel Martín-Platero, Óscar Casabuena-Rincón, Patricia Vázquez-Chas, Enrique Guillamón, M. A. Aguinaga, Mercedes Maqueda, Eva Valdivia, Alberto Baños, Manuel Martínez‐Bueno
Software Mentions: 1
Published: over 5 years ago

10.3390/antibiotics10060643

Core Altered Microorganisms in Colitis Mouse Model: A Comprehensive Time-Point and Fecal Microbiota Transplantation Analysis
Cited by: 41
Author(s): Lijun Shang, Hongbin Liu, Haitao Yu, Meixia Chen, Tianren Yang, Xiangfang Zeng, Shiyan Qiao
Software Mentions: 1
Published: about 5 years ago

10.1002/mbo3.157

Bacterial community dynamics and activity in relation to dissolved organic matter availability during sea‐ice formation in a mesocosm experiment
Cited by: 23
Author(s): Eeva Eronen-Rasimus, Hermanni Kaartokallio, Christina Lyra, Riitta Autio, Harri Kuosa, Gerhard Dieckmann, David N. Thomas
Software Mentions: 1
Published: over 12 years ago

10.1093/aob/mcy233

Embolism resistance in stems of herbaceous Brassicaceae and Asteraceae is linked to differences in woodiness and precipitation
Cited by: 28
Author(s): Larissa Chacon Dória, Cynthia Meijs, Diego Sotto Podadera, Marcelino del Arco, Erik Smets, Sylvain Delzon, Frédéric Lens
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-49361-0

Fungal succession during mammalian cadaver decomposition and potential forensic implications
Cited by: 18
Author(s): Xiaoliang Fu, Jinglin Guo, Dmitrijs Finkelbergs, Jing He, Lagabaiyila Zha, Yadong Guo, Jifeng Cai
Software Mentions: 1
Published: almost 7 years ago

10.1002/mbo3.719

Effects of temperature on bacterial microbiome composition inIxodes scapularisticks
Cited by: 50
Author(s): Santosh Thapa, Yan Zhang, Michael S. Allen
Software Mentions: 1
Published: almost 8 years ago

10.1002/mbo3.667

Active microbiome structure and its association with environmental factors and viruses at different aquatic sites of a high‐altitude wetland
Cited by: 11
Author(s): Yoanna Eissler, María‐Jesús Gálvez, Cristina Dorador, Martha Hengst, Verónica Molina
Software Mentions: 1
Published: about 8 years ago

10.3390/ani11010004

Analysis of Hindgut Microbiome of Sheep and Effect of Different Husbandry Conditions
Cited by: 1
Author(s): Giulietta Minozzi, Filippo Biscarini, Emanuela Dalla Costa, Matteo Chincarini, Nicola Ferri, C. Palestrini, Michela Minero, Silvia Mazzola, R. Piccinini, G. Vignola, Simona Cannas
Software Mentions: 1
Published: over 5 years ago

10.1099/mgen.0.000391

Genomic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients
Cited by: 22
Author(s): Bede Constantinides, Kevin Chau, T Phuong Quan, Gillian Rodger, Monique Andersson, Katie Jeffery, Sam Lipworth, Hyun S. Gweon, Andy Peniket, Graham Pike, Julian Millo, Mary Byukusenge, Matt Holdaway, Cat Gibbons, Amy J Mathers, Derrick W. Crook, Timothy E. A. Peto, A Sarah Walker, Nicole Stoesser
Software Mentions: 1
Published: about 6 years ago

10.3390/ani11020448

Allium-Based Phytobiotic Enhances Egg Production in Laying Hens through Microbial Composition Changes in Ileum and Cecum
Cited by: 21
Author(s): Miguel Rabelo-Ruiz, Juan José Ariza-Romero, María Jesús Zurita-González, Antonio Manuel Martín-Platero, Alberto Baños, Mercedes Maqueda, Eva Valdivia, Manuel Martínez‐Bueno, Juan Manuel Peralta‐Sánchez
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-50090-7

Lactulose drives a reversible reduction and qualitative modulation of the faecal microbiota diversity in healthy dogs
Cited by: 11
Author(s): Marisa Ferreira, Silke Salavati Schmitz, Jeffrey J. Schoenebeck, Dylan Clements, Susan Mary Campbell, Donna Gaylor, Richard J. Mellanby, Adam Gow, Mazdak Salavati
Software Mentions: 1
Published: almost 7 years ago

10.1264/jsme2.ME15127

Responses of Soil Fungal Populations and Communities to the Thinning of Cryptomeria Japonica Forests
Cited by: 12
Author(s): Wan-Rou Lin, Pi-Han Wang, Wen‐Cheng Chen, Ching-Shu Lai, Richard S. Winder
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-019-49713-w

Anthropogenic impact is negatively related to coral health in Sicily (Mediterranean Sea)
Cited by: 6
Author(s): Fiorella Prada, Luigi Musco, Adriana Alagna, Davide Agnetta, Eleonora Beccari, Giovanni D’Anna, Vincenzo Maximiliano Giacalone, Carlo Pipitone, Tomás Vega Fernández, Stefano Goffredo, Fabio Badalamenti
Software Mentions: 1
Published: almost 7 years ago

10.3390/ani11092750

Dietary Phospholipids Enhance Growth Performance and Modulate Cold Tolerance in Meagre (Argyrosomus regius) Juveniles
Cited by: 1
Author(s): Ismael Hachero‐Cruzado, Manuel Manchado
Software Mentions: 1
Published: almost 5 years ago

10.3390/ani11051463

Characterization of Microbiome on Feces, Blood and Milk in Dairy Cows with Different Milk Leucocyte Pattern
Cited by: 12
Author(s): Elisa Scarsella, A. Zecconi, Michela Cintio, Bruno Stefanon
Software Mentions: 1
Published: about 5 years ago

10.1264/jsme2.ME21004

Nitrogen Deficiency-induced Bacterial Community Shifts in Soybean Roots
Cited by: 3
Author(s): Wataru Yazaki, Tomohisa Shimasaki, Yosuke Aoki, Sachiko Masuda, Arisa Shibata, Wataru Suda, Ken Shirasu, Kazufumi Yazaki, Akifumi Sugiyama
Software Mentions: 1
Published: over 5 years ago

10.3390/ani11020577

Expeller-Pressed Canola (Brassica napus) Meal Modulates the Structure and Function of the Cecal Microbiota, and Alters the Metabolome of the Pancreas, Liver, and Breast Muscle of Broiler Chickens
Cited by: 9
Author(s): G. Douglas Inglis, Benjamin D. Wright, Stephanie A. Sheppard, D. Wade Abbott, M. A. Oryschak, Tony Montina
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-50190-4

Comparison of the microbial composition of African fermented foods using amplicon sequencing
Cited by: 44
Author(s): María Díaz, Lee Kellingray, Nwanneka M Akinyemi, Oyetayo Olaoluwa Adefiranye, Arinola B. Olaonipekun, Geoffroy Romaric Bayili, Jekwu Ibezim, Adriana Salomina du Plessis, Marcel Houngbédji, Deus Kamya, Ivan Muzira Mukisa, Guesh Mulaw, Samuel Manthi Josiah, William Onyango Chienjo, Amy Atter, Evans Agbemafle, Theophilus Annan, Nina Bernice Ackah, Elna M. Buys, D. Joseph Hounhouigan, Charles Muyanja, Jesca Nakavuma, Damaris Achieng Odeny, Hagrétou Sawadogo-Lingani, Anteneh Tesfaye Tefera, Wisdom Kofi Amoa-Awua, M. Obodai, Melinda J. Mayer, Folarin A. Oguntoyinbo, Arjan Narbad
Software Mentions: 1
Published: almost 7 years ago

10.1007/s00248-019-01369-9

Characterization of Bacterial Communities in Breeding Waters of Anopheles darlingi in Manaus in the Amazon Basin Malaria-Endemic Area
Cited by: 16
Author(s): Louise K. J. Nilsson, Marta Rodrigues de Oliveira, Osvaldo Marinotti, Elerson Matos Rocha, Sebastian Håkansson, Wanderli Pedro Tadei, Antônia Queiroz Lima de Souza, Olle Terenius
Software Mentions: 1
Published: over 7 years ago

10.1007/s00248-020-01544-3

Natural Variation in Physicochemical Profiles and Bacterial Communities Associated with Aedes aegypti Breeding Sites and Larvae on Guadeloupe and French Guiana
Cited by: 26
Author(s): Lyza Héry, Amandine Guidez, Audrey‐Anne Durand, Christelle Delannay, Josiann Normandeau-Guimond, Yann Reynaud, Jean Issaly, Daniella Goindin, Grégory Legrave, Joël Gustave, Stéphanie Raffestin, Sébastien Breurec, Philippe Constant, Isabelle Dusfour, Claude Guertin, Anubis Vega-Rúa
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-50621-2

Microplastics in gentoo penguins from the Antarctic region
Cited by: 139
Author(s): Filipa Bessa, Norman Ratcliffe, Vanessa Otero, Paula Sobral, João Carlos Marques, Claire M. Waluda, Phil Trathan, José C. Xavier
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-50807-8

Oral selective serotonin reuptake inhibitors activate vagus nerve dependent gut-brain signalling
Cited by: 55
Author(s): Karen‐Anne McVey Neufeld, John Bienenstock, Aadil Bharwani, Kevin Champagne-Jorgensen, Yu Mao, Christine West, Yunpeng Liu, Michael G. Surette, Wolfgang Kunze, Paul Forsythe
Software Mentions: 1
Published: almost 7 years ago

10.3390/ani11082219

Late Gestation Maternal Feed Restriction Decreases Microbial Diversity of the Placenta While Mineral Supplementation Improves Richness of the Fetal Gut Microbiome in Cattle
Cited by: 9
Author(s): Gwendolynn L Hummel, Kelly L Woodruff, Kathy J. Austin, Ryan M Knuth, Scott Lake, Hannah C Cunningham-Hollinger
Software Mentions: 1
Published: about 5 years ago

10.1007/s00248-019-01358-y

How Hosts Taxonomy, Trophy, and Endosymbionts Shape Microbiome Diversity in Beetles
Cited by: 36
Author(s): Michał Kolasa, Radosław Ścibior, Miłosz A. Mazur, D. Kubisz, Katarzyna Dudek, Łukasz Kajtoch
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-50563-9

Development of the equine gut microbiota
Cited by: 22
Author(s): Frederikke Lindenberg, Łukasz Krych, Witold Kot, J. Fielden, Hanne Frøkiær, Gaby Van Galen, Dennis Sandris Nielsen, Axel Kornerup Hansen
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-51136-6

Modulatory Effect of Protein and Carotene Dietary Levels on Pig gut Microbiota
Cited by: 17
Author(s): Rayner González-Prendes, Ramona N. Pena, Emma Solé, Ahmad Reza Seradj, J. Estany, Yuliaxis Ramayo-Caldas
Software Mentions: 1
Published: almost 7 years ago

10.3390/ani9040151

Gut Microbiota Shifts in Pup Athymic BALB/c Mice: An Updated Identification in Nude Mice
Cited by: 0
Author(s): Yuting Li, Hao Sun, Bowen Du, Hui Xu
Software Mentions: 1
Published: over 7 years ago

10.3390/biom10050797

Study of Synthesis Pathways of the Essential Polyunsaturated Fatty Acid 20:5n-3 in the Diatom Chaetoceros Muelleri Using 13C-Isotope Labeling
Cited by: 14
Author(s): Marine Remize, F. Planchon, Andrew Loh, Fabienne Le Grand, Antoine Bideau, Nelly Le Goïc, Elodie Fleury, Philippe Miner, Rudolph Corvaisier, Aswani K. Volety, Philippe Soudant
Software Mentions: 1
Published: about 6 years ago

10.1007/s00248-020-01639-x

The Diversity of Nitrogen-Cycling Microbial Genes in a Waste Stabilization Pond Reveals Changes over Space and Time that Is Uncoupled to Changing Nitrogen Chemistry
Cited by: 6
Author(s): Alea Rose, Anna Padovan, Keith A. Christian, Jodie van de Kamp, Mirjam Kaestli, S. Tsoukalis, Levente Bodrossy, Karen S. Gibb
Software Mentions: 1
Published: almost 6 years ago

10.3390/ani9040143

The Effects of Dietary Insect Meal from Hermetia illucens Prepupae on Autochthonous Gut Microbiota of Rainbow Trout (Oncorhynchus mykiss)
Cited by: 93
Author(s): Simona Rimoldi, Elisabetta Gini, Federica Iannini, Laura Gasco, Genciana Terova
Software Mentions: 1
Published: over 7 years ago

10.3390/nu12072127

Circulating Short-Chain Fatty Acids Are Positively Associated with Adiposity Measures in Chinese Adults
Cited by: 17
Author(s): Yiqing Wang, Huijun Wang, Annie Green Howard, Katie A. Meyer, Matthew C. B. Tsilimigras, Christy L. Avery, Sha Wang, Shan Sun, Jiguo Zhang, Chang Su, Bing Zhang, Anthony A. Fodor
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-51506-0

Impact of Early Life Antibiotic Exposure and Neonatal Hyperoxia on the Murine Microbiome and Lung Injury
Cited by: 13
Author(s): Melissa H. Althouse, Christopher J. Stewart, Weiwu Jiang, Bhagavatula Moorthy, Krithika Lingappan
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-51170-4

Diversity of nectar amino acids in the Fritillaria (Liliaceae) genus: ecological and evolutionary implications
Cited by: 12
Author(s): Katarzyna Roguz, Andrzej Bajguz, Magdalena Chmur, Agnieszka Gołębiewska, Agata Roguz, Marcin Zych
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-51870-x

Survey of bacteria associated with western corn rootworm life stages reveals no difference between insects reared in different soils
Cited by: 9
Author(s): Dalton C. Ludwick, Aaron C. Ericsson, Lisa N. Meihls, Michelle Gregory, Deborah L. Finke, Thomas A. Coudron, Bruce E. Hibbard, Kent S. Shelby
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-51698-5

Retinal artery occlusion is associated with compositional and functional shifts in the gut microbiome and altered trimethylamine-N-oxide levels
Cited by: 17
Author(s): Denise C. Zysset-Burri, Irene Keller, Lieselotte Erika Berger, Peter Neyer, Christian Steuer, Sebastian Wolf, Martin Zinkernagel
Software Mentions: 1
Published: almost 7 years ago

10.1101/2020.11.19.20234229

Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment
Cited by: 12
Author(s): Clarisse Marotz, Pedro Belda-Ferre, Farhana Ali, Promi Das, Shi Huang, Kalen Cantrel, Lingjing Jiang, Cameron Martino, Rachel E. Diner, Gibraan Rahman, Daniel McDonald, George E. Armstrong, Sho M. Kodera, S. De Donato, Gertrude Ecklu-Mensah, Neil Gottel, Mariana Salas Garcia, Leslie Chiang, Rodolfo A. Salido, Justin P. Shaffer, MacKenzie Bryant, Karenina Sanders, Greg Humphrey, Gail Ackermann, Niina Haiminen, Kristen L. Beck, Ho-Cheol Kim, Anna Paola Carrieri, Laxmi Parida, Yoshiki Vázquez-Baeza, Francesca J. Torriani, Rob Knight, Jack A. Gilbert, Daniel A. Sweeney, Sarah Allard
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-51856-9

Long-term performance of seagrass restoration projects in Florida, USA
Cited by: 24
Author(s): Ryan J. Rezek, Bradley T. Furman, Robin P. Jung, Margaret O. Hall, Susan S. Bell
Software Mentions: 1
Published: almost 7 years ago

10.1007/s00248-020-01504-x

Characterizing Microbial Signatures on Sculptures and Paintings of Similar Provenance
Cited by: 6
Author(s): Manolito Torralba, Claire Kuelbs, Kelvin Moncera, Rhonda K. Roby, Karen E. Nelson
Software Mentions: 1
Published: about 6 years ago

10.1007/s00248-019-01403-w

Dynamics of Abundant and Rare Bacteria During Degradation of Lignocellulose from Sugarcane Biomass
Cited by: 21
Author(s): Pilar Eliana Puentes-Téllez, Joana Falcão Salles
Software Mentions: 1
Published: about 7 years ago

10.1186/s12934-016-0491-x

Microorganism-regulated mechanisms of temperature effects on the performance of anaerobic digestion
Cited by: 46
Author(s): Qiang Lin, Guihua He, Junpeng Rui, Xiaoyu Fang, Yong Tao, Jiabao Li, Xiangzhen Li
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-019-52586-8

Declining maerl vitality and habitat complexity across a dredging gradient: Insights from in situ sediment profile imagery (SPI)
Cited by: 18
Author(s): Guillaume Bernard, Alicia Romero-Ramirez, Adeline Tauran, Michael Pantalos, Bruno Deflandre, Jacques Grall, Antoine Grémare
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-52980-2

High-fat diet-mediated dysbiosis exacerbates NSAID-induced small intestinal damage through the induction of interleukin-17A
Cited by: 15
Author(s): Naoki Sugimura, Koji Otani, Toshio Watanabe, Geicho Nakatsu, Sunao Shimada, Kosuke Fujimoto, Yuji Nadatani, Shuhei Hosomi, Fumio Tanaka, Noriko Kamata, Koichi Taira, Yasuaki Nagami, Tetsuya Tanigawa, Satoshi Uematsu, Yasuhiro Fujiwara
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-52273-8

Complex life histories discovered in a critically endangered fish
Cited by: 41
Author(s): James A. Hobbs, Levi S. Lewis, Malte Willmes, Christian Denney, Eva Bush
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.humic.2019.100069

Gut microbiome composition and diversity are related to human personality traits
Cited by: 104
Author(s): Katerina V.‐A. Johnson
Software Mentions: 1
Published: over 6 years ago

10.3390/ani11061534

Successful Use of Geochemical Tools to Trace the Geographic Origin of Long-Snouted Seahorse Hippocampus guttulatus Raised in Captivity
Cited by: 2
Author(s): Ana Elisa Cabral, Fernando Ricardo, Carla Patinha, Eduardo Ferreira da Silva, Miguel Correia, Jorge Palma, Miquel Planas, Ricardo Calado
Software Mentions: 1
Published: about 5 years ago

10.1111/1751-7915.13591

Association between algal productivity and phycosphere composition in an outdoor Chlorella sorokiniana reactor based on multiple longitudinal analyses
Cited by: 14
Author(s): Seth A. Steichen, Song Gao, Peter Waller, Judith K. Brown
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-53559-7

Gastric acid inhibitor aggravates indomethacin-induced small intestinal injury via reducing Lactobacillus johnsonii
Cited by: 27
Author(s): Yuji Nadatani, Toshio Watanabe, Wataru Suda, Atsushi Nakata, Yuji Matsumoto, Shogo Kosaka, Akira Higashimori, Koji Otani, Shuhei Hosomi, Fumio Tanaka, Yasuaki Nagami, Noriko Kamata, Koichi Taira, Hirokazu Yamagami, Tetsuya Tanigawa, Masahira Hattori, Yasuhiro Fujiwara
Software Mentions: 1
Published: over 6 years ago

10.1111/1751-7915.13629

Protective effect of Lactobacillus salivarius Li01 on thioacetamide‐induced acute liver injury and hyperammonaemia
Cited by: 19
Author(s): Liya Yang, Xiaoyuan Bian, Wenshuai Wu, Longxian Lv, Yating Li, Jianzhong Ye, Xianwan Jiang, Qing Wang, Ding Shi, Daiqiong Fang, Jingjing Wu, Kaicen Wang, Jiafeng Xia, Jiao-Jiao Xie, Yao Lu
Software Mentions: 1
Published: about 6 years ago

10.1111/1751-7915.13464

Viral composition and context in metagenomes from biofilm and suspended growth municipal wastewater treatment plants
Cited by: 18
Author(s): Morgan Petrovich, Sarah Ben Maamar, Erica M. Hartmann, Brian T. Murphy, Rachel Poretsky, George F. Wells
Software Mentions: 1
Published: about 7 years ago

10.3390/nu10070890

A Vegetarian Diet Is a Major Determinant of Gut Microbiota Composition in Early Pregnancy
Cited by: 70
Author(s): Helen L. Barrett, Luisa F. Gomez-Arango, Shelley A. Wilkinson, H. David McIntyre, Leonie K. Callaway, Mark Morrison, Marloes Dekker Nitert
Software Mentions: 1
Published: about 8 years ago

10.1111/1751-7915.12769

The contribution of microbial biotechnology to mitigating coral reef degradation
Cited by: 80
Author(s): Katarina Damjanovic, Linda L. Blackall, Nicole S. Webster, Madeleine J. H. van Oppen
Software Mentions: 1
Published: about 9 years ago

10.1111/1751-7915.12457

Effect of temperature and colonization of Legionella pneumophila and Vermamoeba vermiformis on bacterial community composition of copper drinking water biofilms
Cited by: 31
Author(s): Helen Y. Buse, Peng Ji, Vicente Gomez-Alvarez, Amy Pruden, Marc Edwards, Nicholas J. Ashbolt
Software Mentions: 1
Published: over 9 years ago

10.1038/ismej.2016.109

Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time
Cited by: 108
Author(s): Nina Dombrowski, Klaus Schlaeppi, Matthew T. Agler, Stéphane Hacquard, Eric Kemen, Ruben Garrido‐Oter, Jörg Wunder, George Coupland, Paul Schulze‐Lefert
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-019-55089-8

Subsoil microbial community responses to air exposure and legume growth depend on soil properties across different depths
Cited by: 22
Author(s): Hongmei Yan, Fan Yang, Jiamin Gao, Ziyi Peng, Weimin Chen
Software Mentions: 1
Published: over 6 years ago

10.3390/ani11040976

The Influence of Diet Change and Oral Metformin on Blood Glucose Regulation and the Fecal Microbiota of Healthy Horses
Cited by: 5
Author(s): Aaron C. Ericsson, Philip J. Johnson, Lyndsy M. Gieche, Chelsea Zobrist, Katie Bucy, Kile S. Townsend, Lynn M. Martin, Alison M. LaCarrubba
Software Mentions: 1
Published: over 5 years ago

10.1111/1751-7915.13395

Effect of forest fire prevention treatments on bacterial communities associated with productiveBoletus edulissites
Cited by: 18
Author(s): Olaya Mediavilla, József Geml, Jaime Olaizola, Juan Rueda, Petr Baldrián, Pablo Martín‐Pinto
Software Mentions: 1
Published: over 7 years ago

10.3390/nu13062107

Habitual Dietary Intake Affects the Altered Pattern of Gut Microbiome by Acarbose in Patients with Type 2 Diabetes
Cited by: 13
Author(s): Fumie Takewaki, Harushi Nakajima, Daiki Takewaki, Yoshitaka Hashimoto, Susumu Majima, Hiroshi Okada, Takafumi Senmaru, Emi Ushigome, Masahide Hamaguchi, Masahiro Yamazaki, Yoshiki Tanaka, Shunji Nakajima, Hiroshi Ohno, Michiaki Fukui
Software Mentions: 1
Published: about 5 years ago

10.1038/s41396-020-00822-9

Plant resistome profiling in evolutionary old bog vegetation provides new clues to understand emergence of multi-resistance
Cited by: 29
Author(s): Melanie M. Obermeier, Wisnu Adi Wicaksono, Julian Taffner, Alessandro Bergna, Anja Poehlein, Tomislav Cernava, Stefanie Lindstaedt, Mario Lovrić, Christina A. Müller Bogotá, Gabriele Berg
Software Mentions: 1
Published: almost 6 years ago

10.3390/biomedicines9081065

Clostridium butyricum MIYAIRI 588 Modifies Bacterial Composition under Antibiotic-Induced Dysbiosis for the Activation of Interactions via Lipid Metabolism between the Gut Microbiome and the Host
Cited by: 13
Author(s): Tadashi Ariyoshi, Mao Hagihara, Susumu Tomono, Shuhei Eguchi, Ayaka Minemura, Daiki Miura, Koichiro Oka, Motomichi Takahashi, Yuka Yamagishi, Hiroshige Mikamo
Software Mentions: 1
Published: almost 5 years ago

10.3390/ani11041185

Schizochytrium sp. (T18) Oil as a Fish Oil Replacement in Diets for Juvenile Rainbow Trout (Oncorhynchus mykiss): Effects on Growth Performance, Tissue Fatty Acid Content, and Lipid-Related Transcript Expression
Cited by: 11
Author(s): Angelisa T. Y. Osmond, Michael T. Arts, Jennifer R. Hall, Matthew L. Rise, Richard P. Bazinet, Roberto E. Armenta, Stefanie M. Colombo
Software Mentions: 1
Published: over 5 years ago

10.1111/1751-7915.13417

Long‐term microbial community dynamics at two full‐scale biotrickling filters treating pig house exhaust air
Cited by: 8
Author(s): Caroline Van der Heyden, Tom De Mulder, Eveline Volcke, Peter Demeyer, Marc Heyndrickx, Geertrui Rasschaert
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-55940-y

Habitat filtering shapes the differential structure of microbial communities in the Xilingol grassland
Cited by: 10
Author(s): Jie Yang, Yanfen Wang, Xiaoyong Cui, Kai Xue, Yiming Zhang, Zhisheng Yu
Software Mentions: 1
Published: over 6 years ago

10.1111/1751-7915.13461

Aquatic microbial diversity associated with faecal pollution of Norwegian waterbodies characterized by 16S rRNA gene amplicon deep sequencing
Cited by: 15
Author(s): Lisa Paruch, Adam M. Paruch, Hans Geir Eiken, Roald Sørheim
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-56058-x

Faecal pollution affects abundance and diversity of aquatic microbial community in anthropo-zoogenically influenced lotic ecosystems
Cited by: 36
Author(s): Lisa Paruch, Adam M. Paruch, Hans Geir Eiken, Roald Sørheim
Software Mentions: 1
Published: over 6 years ago

10.3390/ani10050785

Green Tea and Pomegranate Extract Administered During Critical Moments of the Production Cycle Improves Blood Antiradical Activity and Alters Cecal Microbial Ecology of Broiler Chickens
Cited by: 11
Author(s): Vera Perricone, Marcello Comi, Carlotta Giromini, R. Rebucci, Alessandro Agazzi, G. Savoini, V. Bontempo
Software Mentions: 1
Published: over 6 years ago

10.3390/metabo9100229

Metabolite Changes in an Estuarine Annelid Following Sublethal Exposure to a Mixture of Zinc and Boscalid
Cited by: 12
Author(s): Georgia M. Sinclair, Allyson L. O’Brien, Michael J. Keough, David P. De Souza, Saravanan Dayalan, Komal Kanojia, Konstantinos A. Kouremenos, Dedreia Tull, Rhys A. Coleman, Oliver A.H. Jones, Sara M. Long
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-56264-7

Habitat selection patterns of a species at the edge – case study of the native racer goby population in Central Europe
Cited by: 7
Author(s): Krzysztof Kukuła, Bernadetta Ortyl, Aneta Bylak
Software Mentions: 1
Published: over 6 years ago

10.3390/metabo10090370

Effect of Added Dietary Betaine and Soluble Fiber on Metabolites and Fecal Microbiome in Dogs with Early Renal Disease
Cited by: 11
Author(s): Eden Ephraim, Dennis E. Jewell
Software Mentions: 1
Published: almost 6 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292