cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.1038/s41598-018-23373-8

Effect of live yeast Saccharomyces cerevisiae (Actisaf Sc 47) supplementation on the performance and hindgut microbiota composition of weanling pigs
Cited by: 38
Author(s): Tadele G. Kiros, Hooman Derakhshani, Eric Pinloche, Romain d'Inca, Jason Marshall, Eric Auclair, Ehsan Khafipour, Andrew Van Kessel
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-23870-w

Dysbiosis of the salivary microbiota in pediatric-onset primary sclerosing cholangitis and its potential as a biomarker
Cited by: 46
Author(s): Kentaro Iwasawa, Wataru Suda, Tomoyuki Tsunoda, Manari Oikawa-Kawamoto, Shuichiro Umetsu, Lena Takayasu, Ayano Inui, Tomoo Fujisawa, Hidetoshi Morita, Tsuyoshi Sogo, Masahira Hattori
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms9081616

Oral Factors That Impact the Oral Microbiota in Parkinson’s Disease
Cited by: 17
Author(s): Natalia S. Rozas, Gena D. Tribble, Cameron B. Jeter
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9051108

Differences in the On- and Off-Tumor Microbiota between Right- and Left-Sided Colorectal Cancer
Cited by: 13
Author(s): Oliver Phipps, Mohammed Nabil Quraishi, Edward Dickson, Helen Steed, Aditi Kumar, Austin G Acheson, Andrew D Beggs, Matthew Brookes, Hafid O. Al-Hassi
Software Mentions: 1
Published: about 5 years ago

10.1128/AEM.02427-20

Dilution-to-Stimulation/Extinction Method: a Combination Enrichment Strategy To Develop a Minimal and Versatile Lignocellulolytic Bacterial Consortium
Cited by: 23
Author(s): Laura Díaz-García, Sixing Huang, Cathrin Spröer, R. Sierra, Boyke Bunk, Jörg Overmann, Diego Javier Jiménez
Software Mentions: 1
Published: over 5 years ago

10.1128/AEM.02907-20

Transmission Dynamics of Shiga Toxin-Producing Escherichia coli in New Zealand Cattle from Farm to Slaughter
Cited by: 2
Author(s): A. Springer Browne, Anne C. Midwinter, Helen Withers, Adrian L. Cookson, Patrick J. Biggs, Jonathan Marshall, Jackie Benschop, S.C. Hathaway, Lynn Rogers, Shahista Nisa, C. Reed Hranac, Taylor Winkleman, Nigel French
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms7060176

High-Fat Diet Alters the Intestinal Microbiota in Streptozotocin-Induced Type 2 Diabetic Mice
Cited by: 38
Author(s): Sheng Liu, Panpan Qin, Jing Wang
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-25086-4

Assessing the Zoantharian Diversity of the Tropical Eastern Pacific through an Integrative Approach
Cited by: 15
Author(s): Karla B. Jaramillo, Miriam Reverter, Paúl O. Guillén, Grace P. McCormack, Jenny K. Rodríguez, Frédéric Sinniger, Olivier P. Thomas
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms8091299

Tick-Borne Pathogens Shape the Native Microbiome Within Tick Vectors
Cited by: 35
Author(s): Abdulsalam Adegoke, Deepak Kumar, Cailyn G Bobo, Imran Rashid, A. Z. Durrani, Muhammad Sohail Sajid, Shahid Karim
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-25414-8

Recruitment Drives Spatial Variation in Recovery Rates of Resilient Coral Reefs
Cited by: 80
Author(s): Sally J. Holbrook, Thomas C. Adam, Peter J. Edmunds, Russell J. Schmitt, Robert C. Carpenter, Andrew J. Brooks, Hunter S. Lenihan, Cheryl J. Briggs
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms9071449

Alteration of the Fecal but Not Salivary Microbiome in Patients with Behçet’s Disease According to Disease Activity Shift
Cited by: 8
Author(s): Jin Cheol Kim, Mi Jin Park, Sun Park, Eun‐So Lee
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-25989-2

Increasing densities of an invasive polychaete enhance bioturbation with variable effects on solute fluxes
Cited by: 29
Author(s): Lea Kauppi, Guillaume Bernard, Ralf Bastrop, Alf Norkko, Joanna Norkko
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-25745-6

Trophic overlap between expanding and contracting fish predators in a range margin undergoing change
Cited by: 11
Author(s): Mats Westerbom, Antti Lappalainen, Olli Mustonen, Alf Norkko
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-26327-2

Chronic rhinosinusitis with nasal polyps is characterized by dysbacteriosis of the nasal microbiota
Cited by: 61
Author(s): Thanit Chalermwatanachai, Ramiro Vílchez-Vargas, Gabriële Holtappels, Tim Lacoere, Ruy Jáuregui, Frederiek‐Maarten Kerckhof, Dietmar H. Pieper, Tom Van de Wiele, Mario Vaneechoutte, Thibaut Van Zele, Claus Bachert
Software Mentions: 1
Published: about 8 years ago

10.3390/microorganisms9061244

Soil Microbial Indicators within Rotations and Tillage Systems
Cited by: 16
Author(s): Gevan D. Behnke, Nakian Kim, María Celina Zabaloy, Chance W. Riggins, Sandra L. Rodriguez-Zas, María B. Villamil
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms8060873

Skin Microbiome Analysis for Forensic Human Identification: What Do We Know So Far?
Cited by: 25
Author(s): Pamela Tozzo, Gabriella D’Angiolella, Paola Brun, Ignazio Castagliuolo, Sarah Gino, Luciana Caenazzo
Software Mentions: 1
Published: about 6 years ago

10.3390/microorganisms9081785

Root-Associated Microbiomes, Growth and Health of Ornamental Geophytes Treated with Commercial Plant Growth-Promoting Products
Cited by: 0
Author(s): Gavriel Friesem, Noam Reznik, Michal Sharon Cohen, Nir Carmi, Zohar Kerem, Iris Yedidia
Software Mentions: 1
Published: almost 5 years ago

10.3390/microorganisms7120649

Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children
Cited by: 31
Author(s): Aly Kodio, Drissa Coulibaly, Abdoulaye K. Koné, Salimata Konaté, Safiatou Doumbo, Abdoulaye Guindo, Fadi Bittar, Frédérique Gouriet, Didier Raoult, Mahamadou Aly Thera, Stéphane Ranque
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms9061152

Differences in Gut Microbiome Composition and Antibiotic Resistance Gene Distribution between Chinese and Pakistani University Students from a Common Peer Group
Cited by: 6
Author(s): Tianshu Feng, Mian Gul Hilal, Yijie Wang, Rui Zhou, Qiaoling Yu, Jiapeng Qu, Huan Li
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-26729-2

The influence of salinity on the effects of Multi-walled carbon nanotubes on polychaetes
Cited by: 12
Author(s): Lucia De Marchi, Victor Neto, Carlo Pretti, Etelvina Figueira, Emo Chiellini, Andrea Morelli, Amadeu M.V.M. Soares, Rosa Freitas
Software Mentions: 1
Published: about 8 years ago

10.3390/microorganisms9071380

Land-Use Type Drives Soil Population Structures of the Entomopathogenic Fungal Genus Metarhizium
Cited by: 8
Author(s): María Fernández-Bravo, Florian Gschwend, Johanna Mayerhofer, Anna Hug, Franco Widmer, Jürg Enkerli
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-27491-1

Fish mitigate trophic depletion in marine cave ecosystems
Cited by: 13
Author(s): Simona Bussotti, Antonio Franco, Carlo Nike Bianchi, Pierre Chevaldonné, Lea Egea, Emanuela Fanelli, Christophe Lejeusne, Luigi Musco, Carlos Navarro‐Barranco, Alexis Pey, Serge Planes, Jean Vincent Vieux-Ingrassia, Paolo Guidetti
Software Mentions: 1
Published: about 8 years ago

10.3390/microorganisms8060879

Changes in the Microbiome of Cryptosporidium-Infected Mice Correlate to Differences in Susceptibility and Infection Levels
Cited by: 25
Author(s): Raheela Charania, Brandy E. Wade, Nina McNair, Jan R. Mead
Software Mentions: 1
Published: about 6 years ago

10.3390/microorganisms8060882

Investigation of Intestinal Microbiota and Fecal Calprotectin in Non-Toxigenic and Toxigenic Clostridioides difficile Colonization and Infection
Cited by: 8
Author(s): Seunghoon Han, Joowon Yi, Jihoon Kim, And Hee-Won Moon
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-27709-2

Maternal Trophic Status and Offpsring Phenotype in a Marine Invertebrate
Cited by: 13
Author(s): Enrique González‐Ortegón, Lewis Le Vay, Mark Walton, Luis Giménez
Software Mentions: 1
Published: about 8 years ago

10.1128/AEM.00735-19

Optimizing the Production of Nursery-Based Biological Soil Crusts for Restoration of Arid Land Soils
Cited by: 25
Author(s): Julie Bethany, Ana Giraldo-Silva, Corey Nelson, Nichole N. Barger, Ferrán García-Pichel
Software Mentions: 1
Published: about 7 years ago

10.1186/s42523-020-00050-8

The microbiota of the surface, dermis and subcutaneous tissue of dog skin
Cited by: 8
Author(s): Rocío García-Fonticoba, Lluís Ferrer, Olga Francino, Anna Cuscó
Software Mentions: 1
Published: almost 6 years ago

10.3390/microorganisms9020211

Disentangling Responses of the Subsurface Microbiome to Wetland Status and Implications for Indicating Ecosystem Functions
Cited by: 4
Author(s): Jie Gao, Miao Liu, Sixue Shi, Ying Liu, Yu Duan, Xianguo Lv, Tsing Bohu, Yuehui Li, Yuanman Hu, Na Wang, Qiuying Wang, Guoqiang Zhuang, Xuliang Zhuang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41396-021-00960-8

Nutrient supplementation experiments with saltern microbial communities implicate utilization of DNA as a source of phosphorus
Cited by: 7
Author(s): Zheng-Shuang Hua, Matthew Ouellette, Andrea M. Makkay, R. Thane Papke, Olga Zhaxybayeva
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8050696

Role of Leaf Litter in Above-Ground Wood Decay
Cited by: 4
Author(s): Grant T. Kirker, Amy B. Bishell, Jed Cappellazzi, Jonathan M. Palmer, Nathan J. Bechle, Patricia K. Lebow, Stan Lebow
Software Mentions: 1
Published: over 6 years ago

10.1186/s42523-019-0012-4

Looking like the locals - gut microbiome changes post-release in an endangered species
Cited by: 36
Author(s): Rowena Chong, Catherine E. Grueber, Samantha Fox, Phil Wise, Vanessa R. Barrs, Carolyn J. Hogg, Katherine Belov
Software Mentions: 1
Published: almost 7 years ago

10.3390/microorganisms9071464

Culturable and Non-Culturable Blood Microbiota of Healthy Individuals
Cited by: 11
Author(s): Stefan Panaiotov, Yordan Hodzhev, Borislava Tsafarova, Vladimir Tolchkov, Reni Kalfin
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms7100383

Food Preservatives Induce Proteobacteria Dysbiosis in Human-Microbiota Associated Nod2-Deficient Mice
Cited by: 37
Author(s): L Hrncírová, Vladimira Machova, Eva Trckova, Jan Krejsek, Tomáš Hrnčíř
Software Mentions: 1
Published: almost 7 years ago

10.1128/AEM.02615-16

Alternative Protein Sources in the Diet Modulate Microbiota and Functionality in the Distal Intestine of Atlantic Salmon (Salmo salar)
Cited by: 124
Author(s): Karina Gajardo, Alexander Jaramillo-Torres, Trond M. Kortner, Daniel L. Merrifield, John Tinsley, Anne Marie Bakke, Åshild Krogdahl
Software Mentions: 1
Published: over 9 years ago

10.1128/AEM.01235-16

The Microbiota of Breast Tissue and Its Association with Breast Cancer
Cited by: 347
Author(s): Camilla Urbaniak, Gregory B. Gloor, Muriel Brackstone, Leslie Scott, Mark Tangney, Gregor Reid
Software Mentions: 1
Published: about 10 years ago

10.1093/aobpla/plv123

Effects of disturbance regime on carbohydrate reserves in meadow plants
Cited by: 12
Author(s): Štěpán Janeček, Alena Bartušková, Michael Bartoš, Jan Altman, Francesco de Bello, Jiří Doležal, Vít Latzel, Vojtěch Lanta, Jan Lepš, Jitka Klimešová
Software Mentions: 1
Published: over 11 years ago

10.3390/microorganisms8050632

Revealing Fungal Communities in Alpine Wetlands through Species Diversity, Functional Diversity and Ecological Network Diversity
Cited by: 12
Author(s): Fei Xie, Anzhou Ma, Haoran Zhou, Yu Liang, Jun Yin, Keping Ma, Xuliang Zhuang, Guoqiang Zhuang
Software Mentions: 1
Published: over 6 years ago

10.1093/aobpla/plw004

Changes in composition, ecology and structure of high-mountain vegetation: a re-visitation study over 42 years
Cited by: 63
Author(s): Alberto Evangelista, Ludovico Frate, María Laura Carranza, Fabio Attorre, Giovanni Pelino, Angela Stanisci
Software Mentions: 1
Published: almost 11 years ago

10.3390/microorganisms9050888

Fecal Microbiota Perspective for Evaluation of Prebiotic Potential of Bamboo Hemicellulose Hydrolysate in Mice: A Preliminary Study
Cited by: 3
Author(s): Nao Ikeyama, Mitsuo Sakamoto, Moriya Ohkuma, Shigeru Hiramoto, Jianpeng Wang, Shigenobu Tóne, Kiwamu Shiiba
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8071040

Metabarcoding Analyses of Gut Microbiota of Nile Tilapia (Oreochromis niloticus) from Lake Awassa and Lake Chamo, Ethiopia
Cited by: 32
Author(s): Negash Kabtimer Bereded, Manuel Curto, Konrad J. Domig, Getachew Beneberu, Solomon Workneh Fanta, Herwig Waidbacher, Harald Meimberg
Software Mentions: 1
Published: about 6 years ago

10.1093/aobpla/plv018

Changes in plant species composition of coastal dune habitats over a 20-year period
Cited by: 37
Author(s): Silvia Del Vecchio, Irene Prisco, Alicia Teresa Rosario Acosta, Angela Stanisci
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-018-29684-0

Exploring the pathology of an epidermal disease affecting a circum-Antarctic sea star
Cited by: 14
Author(s): Laura Núñez Pons, Thierry M. Work, Carlos Angulo‐Preckler, Juan Moles, Conxita Àvila
Software Mentions: 1
Published: about 8 years ago

10.3390/microorganisms7110511

The Effect of Maternal Postpartum Practices on Infant Gut Microbiota: A Chinese Cohort Study
Cited by: 12
Author(s): Ying Wang, Liu Yan-qun, Jinbing Bai, Xiaoli Chen
Software Mentions: 1
Published: almost 7 years ago

10.3390/microorganisms8101581

Investigation of Age-Related Changes in the Skin Microbiota of Korean Women
Cited by: 13
Author(s): Minseok Kim, Tansol Park, Jong-Il Yun, Hye Won Lim, Ning Han, Seung Tae Lee
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41396-019-0531-8

Consistent host and organ occupancy of phyllosphere bacteria in a community of wild herbaceous plant species
Cited by: 67
Author(s): Julien Massoni, Miriam Bortfeld‐Miller, Ludwig Jardillier, Guillem Salazar, Shinichi Sunagawa, Julia A. Vorholt
Software Mentions: 1
Published: almost 7 years ago

10.3390/microorganisms9051032

Effects of a Bioprocessed Soybean Meal Ingredient on the Intestinal Microbiota of Hybrid Striped Bass, Morone chrysops x M. saxatilis
Cited by: 6
Author(s): Emily Fowler, Prakash Poudel, Brandon M. White, Benoit St‐Pierre, Michael L. Brown
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8111721

Characterization of the Kenyan Honey Bee (Apis mellifera) Gut Microbiota: A First Look at Tropical and Sub-Saharan African Bee Associated Microbiomes
Cited by: 14
Author(s): Yosef Hamba Tola, Jacqueline Wahura Waweru, Gregory D. D. Hurst, Bernard Slippers, Juan C. Paredes
Software Mentions: 1
Published: almost 6 years ago

10.3390/microorganisms7100463

Probiotics Prevents Sensitization to Oral Antigen and Subsequent Increases in Intestinal Tight Junction Permeability in Juvenile–Young Adult Rats
Cited by: 26
Author(s): Janyerkye Tulyeu, Hideki Kumagai, Eriko F. Jimbo, Shinya Watanabe, Koji Yokoyama, Longzhu Cui, Hitoshi Osaka, Makiko Mieno, Takanori Yamagata
Software Mentions: 1
Published: almost 7 years ago

10.1093/aobpla/plaa029

The impact of <i>Spodoptera exigua</i> herbivory on <i>Meloidogyne incognita</i>-induced root responses depends on the nematodes’ life cycle stages
Cited by: 12
Author(s): Crispus M Mbaluto, Esraa M Ahmad, Melody Fu, Ainhoa Martínez‐Medina, Nicole M. van Dam
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-30474-x

Seasonal variability of diet and trophic level of the gelatinous predator Pelagia noctiluca (Scyphozoa)
Cited by: 26
Author(s): Giacomo Milisenda, Sergio Rossi, Salvatrice Vizzini, Verónica Fuentes, Jennifer E. Purcell, Uxue Tilves, Stefano Piraino
Software Mentions: 1
Published: about 8 years ago

10.1093/aobpla/plt043

Banking on the past: seed banks as a reservoir for rare and native species in restored vernal pools
Cited by: 34
Author(s): Akasha M. Faist, Scott Ferrenberg, Sharon K. Collinge
Software Mentions: 1
Published: over 13 years ago

10.5713/ajas.19.0499

β-Carotene prevents weaning-induced intestinal inflammation by modulating gut microbiota in piglets
Cited by: 30
Author(s): Ruonan Li, Lingqian Li, Hong Pan, Wuying Lang, Junnan Hui, Yang Yu, Xin Zheng
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-30159-5

ERAP1 deficient mice have reduced Type 1 regulatory T cells and develop skeletal and intestinal features of Ankylosing Spondylitis
Cited by: 22
Author(s): Yuliya Pepelyayeva, David P W Rastall, Yasser A. Aldhamen, Patrick M. O’Connell, Sandra Raehtz, Fadel S. Alyaqoub, Maja K. Blake, Ashley M Raedy, Ariana Angarita, Abdulraouf M Abbas, Cristiane Pereira-Hicks, Sarah G Roosa, Laura R. McCabe, Andrea Amalfitano
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-30581-9

Sex-specific associations of infants’ gut microbiome with arsenic exposure in a US population
Cited by: 45
Author(s): Anne G. Hoen, Juliette C. Madan, Zhigang Li, Modupe Coker, Sara Lundgren, Hilary G. Morrison, Thomas J. Palys, Brian P. Jackson, Mitchell L. Sogin, Kathryn L. Cottingham, Margaret R. Karagas
Software Mentions: 1
Published: almost 8 years ago

10.1007/s13280-018-1133-9

Relative impacts of fishing and eutrophication on coastal fish assessed by comparing a no-take area with an environmental gradient
Cited by: 23
Author(s): Lena Bergström, Martin Karlsson, Ulf Bergström, Leif Pihl, Patrik Kraufvelin
Software Mentions: 1
Published: over 7 years ago

10.1093/aobpla/plu056

Belowground legacies of Pinus contorta invasion and removal result in multiple mechanisms of invasional meltdown
Cited by: 70
Author(s): Ian A. Dickie, Mark G. St. John, G. W. Yeates, Chris W. Morse, Karen I. Bonner, Kate H. Orwin, Duane A. Peltzer
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-018-31116-y

Distinct systemic microbiome and microbial translocation are associated with plasma level of anti-CD4 autoantibody in HIV infection
Cited by: 19
Author(s): Wanli Xu, Zhenwu Luo, Alexander V. Alekseyenko, Lisa Martin, Zhuang Wan, Binhua Ling, Zhiqiang Qin, Sonya L. Heath, Kendra Maas, Xiaomei Cong, Wei Jiang
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31683-0

Impact of mangrove forests degradation on biodiversity and ecosystem functioning
Cited by: 169
Author(s): Laura Carugati, Beatrice Gatto, Eugenio Rastelli, Marco Lo Martire, Caterina Coral, Silvestro Greco, Roberto Danovaro
Software Mentions: 1
Published: almost 8 years ago

10.3390/antiox9070640

The Interaction between Mitochondrial Oxidative Stress and Gut Microbiota in the Cardiometabolic Consequences in Diet-Induced Obese Rats
Cited by: 23
Author(s): Adriana Ortega‐Hernández, Ernesto Martínez‐Martínez, Rubén Gómez-Gordo, Natalia López‐Andrés, Amaya Fernández‐Celis, Beatriz Gutiérrrez-Miranda, Marı́a Luisa Nieto, Teresa Alarcón, Claudio Alba, Dulcenombre Gómez-Garré, Victoria Cachofeiro
Software Mentions: 1
Published: about 6 years ago

10.1186/s13756-021-00915-w

Investigating potential transmission of antimicrobial resistance in an open-plan hospital ward: a cross-sectional metagenomic study of resistome dispersion in a lower middle-income setting
Cited by: 1
Author(s): Anushia Ashokan, Josh Hanson, Ne Myo Aung, Mar Mar Kyi, Steven Taylor, Jocelyn M. Choo, Erin Flynn, Fredrick M. Mobegi, Morgyn S. Warner, Steve Wesselingh, Mark Boyd, Geraint B. Rogers
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms9030669

Actinotignum schaalii: Relation to Concomitants and Connection to Patients’ Conditions in Polymicrobial Biofilms of Urinary Tract Catheters and Urines
Cited by: 3
Author(s): Iva Kotásková, Vít Syrovátka, Hana Obručová, Petra Vídeňská, Barbora Zwinsová, Veronika Holá, Eva Blaštíková, Filip Růžička, Tomáš Freiberger
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-32089-8

Tracking Fish Abundance by Underwater Image Recognition
Cited by: 96
Author(s): Simone Marini, Emanuela Fanelli, Valerio Sbragaglia, Ernesto Azzurro, Joaquín Del Río, Jacopo Aguzzi
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-32375-5

Direct-fed microbial supplementation influences the bacteria community composition of the gastrointestinal tract of pre- and post-weaned calves
Cited by: 43
Author(s): Bridget E. Fomenky, Duy Ngoc, Guylaine Talbot, J. Chiquette, Nathalie Bissonnette, Yvan Chouinard, Martin Lessard, Eveline M. Ibeagha‐Awemu
Software Mentions: 1
Published: almost 8 years ago

10.1128/AAC.01395-19

Multiple-Ascending-Dose Phase 1 Clinical Study of the Safety, Tolerability, and Pharmacokinetics of CRS3123, a Narrow-Spectrum Agent with Minimal Disruption of Normal Gut Microbiota
Cited by: 11
Author(s): Barbara Lomeli, Hal Galbraith, Jared Schettler, George A. Saviolakis, Wael Elamin, Blaire L. Osborn, Jacques Ravel, Keith Z. Hazleton, Catherine Lozupone, Ronald J. Evans, Stacie Bell, Urs A. Ochsner, Thale C. Jarvis, Shahida Baqar, Nebojša Janjić
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms9030501

Bacterial Communities and Enzymatic Activities in Sediments of Long-Term Fish and Crab Aquaculture Ponds
Cited by: 13
Author(s): Zhimin Zhang, Qinghui Deng, Lingling Wan, Xiuyun Cao, Yiyong Zhou, Changchun Song
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8081162

A Cross-Sectional Study of the Gut Microbiota Composition in Moscow Long-Livers
Cited by: 7
Author(s): Daria A. Kashtanova, Natalia Klimenko, И. Д. Стражеско, Elizaveta V. Starikova, Oksana E. Glushchenko, Denis Gudkov, О. Н. Ткачева
Software Mentions: 1
Published: about 6 years ago

10.3390/microorganisms9071484

Screening New Xylanase Biocatalysts from the Mangrove Soil Diversity
Cited by: 1
Author(s): Corinne Ivaldi, Mariane Daou, Laurent Vallon, Alexandra Bisotto, Mireille Haon, Soňa Garajová, Emmanuel Bertrand, Craig B. Faulds, Giuliano Sciara, Adrien Jacotot, Cyril Marchand, Mylène Hugoni, Harivony Rakotoarivonina, Marie‐Noëlle Rosso, Caroline Rémond, Patricia Luis, Éric Record
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9091909

Assessing the Risks of Potential Bacterial Pathogens Attaching to Different Microplastics during the Summer–Autumn Period in a Mariculture Cage
Cited by: 20
Author(s): Dandi Hou, Man Hong, Yanting Wang, Pengsheng Dong, Huangwei Cheng, Huizhen Yan, Zhiyuan Yao, Daoji Li, Kai Wang, Demin Zhang
Software Mentions: 1
Published: almost 5 years ago

10.3390/microorganisms8091395

Modulation of the Gut Microbiota Alters the Tumour-Suppressive Efficacy of Tim-3 Pathway Blockade in a Bacterial Species- and Host Factor-Dependent Manner
Cited by: 10
Author(s): Bokyoung Lee, Jieun Lee, Min-Yeong Woo, Mi Jin Lee, Ho‐Joon Shin, Kyongmin Kim, Sun Park
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-33122-6

Effect of a butyrate-fortified milk replacer on gastrointestinal microbiota and products of fermentation in artificially reared dairy calves at weaning
Cited by: 31
Author(s): Eóin O’Hara, A. K. Kelly, Matthew S. McCabe, David A. Kenny, Le Luo Guan, Sinéad M. Waters
Software Mentions: 1
Published: almost 8 years ago

10.3390/microorganisms8020213

Rhizosphere Microbiome of Arid Land Medicinal Plants and Extra Cellular Enzymes Contribute to Their Abundance
Cited by: 26
Author(s): Abdul Latif Khan, Sajjad Asaf, Raeid M. M. Abed, Yen Ning Chai, Ahmed Al‐Rawahi, Tapan Kumar Mohanta, Ahmed Al‐Rawahi, Daniel P. Schachtman, Ahmed Al‐Harrasi
Software Mentions: 1
Published: over 6 years ago

10.3390/microorganisms9081717

Effect of Methionine Supplementation on Rumen Microbiota, Fermentation, and Amino Acid Metabolism in In Vitro Cultures Containing Nitrate
Cited by: 10
Author(s): Faiz‐ul Hassan, Yanxia Guo, Mengwei Li, Zhengyi Tang, Lijuan Peng, Xin Liang, Chengjian Yang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-33619-0

Non-invasive continuous real-time in vivo analysis of microbial hydrogen production shows adaptation to fermentable carbohydrates in mice
Cited by: 27
Author(s): José M. S. Fernández-Calleja, Prokopis Konstanti, Hans J. M. Swarts, Lex Bouwman, Vicenta Garcia-Campayo, Nils Billecke, Annemarie Oosting, Hauke Smidt, Jaap Keijer, Evert M. van Schothorst
Software Mentions: 1
Published: almost 8 years ago

10.1007/s13280-018-1088-x

Recreational boating degrades vegetation important for fish recruitment
Cited by: 29
Author(s): Joakim P. Hansen, Göran Sundblad, Ulf Bergström, Åsa N. Austin, Serena Donadi, Britas Klemens Eriksson, Johan Eklöf
Software Mentions: 1
Published: almost 8 years ago

10.3390/microorganisms9010039

Lactobacillus iners and gasseri, Prevotella bivia and HPV Belong to the Microbiological Signature Negatively Affecting Human Reproduction
Cited by: 18
Author(s): Giuseppina Campisciano, Valerio Iebba, Gabriella Zito, Stefania Luppi, Monica Martinelli, Leo Fischer, Francesco De Seta, Giuseppe Basile, Giuseppe Ricci, Manola Comar
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms7120610

Modulation of Gut Microbiota by Glucosamine and Chondroitin in a Randomized, Double-Blind Pilot Trial in Humans
Cited by: 8
Author(s): Sandi L. Navarro, Lisa Levy, Keith R. Curtis, Johanna W. Lampe, Meredith A.J. Hullar
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-33995-7

Differences in the fecal microbiota of neonates born at home or in the hospital
Cited by: 33
Author(s): Joan Combellick, Hakdong Shin, Dongjae Shin, Yi Cai, Holly Hagan, Corey Lacher, David L. Lin, Kathryn McCauley, Susan V. Lynch, Maria Gloria Domínguez-Bello
Software Mentions: 1
Published: almost 8 years ago

10.1164/rccm.202002-0460OC

The Respiratory Microbiome in Chronic Hypersensitivity Pneumonitis Is Distinct from That of Idiopathic Pulmonary Fibrosis
Cited by: 40
Author(s): Rachele Invernizzi, Benjamin Wu, Joseph Barnett, Poonam Ghai, Shaun Kingston, Richard Hewitt, Johanna Feary, Yonghua Li, Felix Chua, Zhe Wu, Athol U. Wells, Peter M. George, Elisabetta Renzoni, Andrew G. Nicholson, Alexandra Rice, Anand Devaraj, Leopoldo N. Segal, Adam Byrne, Toby M. Maher, Clare M. Lloyd, Philip L. Molyneaux
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms9010068

Comparative Analysis of Bacterial Communities in Lutzomyia ayacuchensis Populations with Different Vector Competence to Leishmania Parasites in Ecuador and Peru
Cited by: 5
Author(s): Ahmed Tabbabi, Shinya Watanabe, Daiki Mizushima, Abraham G. Cáceres, Eduardo A. Gómez, Daisuke Yamamoto, Longzhu Cui, Yoshihisa Hashiguchi, Hirotomo Kato
Software Mentions: 1
Published: over 5 years ago

10.3390/antibiotics10040352

Characterization of Environmental and Cultivable Antibiotic-Resistant Microbial Communities Associated with Wastewater Treatment
Cited by: 4
Author(s): Alicia Sorgen, James E. Johnson, Kevin Lambirth, Sandra M. Clinton, Molly C. Redmond, Anthony A. Fodor, Cynthia Gibas
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-34398-4

Association between Neutrophil-to-Lymphocyte Ratio and Gut Microbiota in a Large Population: a Retrospective Cross-Sectional Study
Cited by: 17
Author(s): Hee Yoon, Han Na Kim, Su Hwan Lee, Soo Jung Kim, Yoosoo Chang, Seungho Ryu, Hocheol Shin, Hyung Lae Kim, Jin Hwa Lee
Software Mentions: 1
Published: almost 8 years ago

10.3390/microorganisms8111828

Phosphorus Reduces Negative Effects of Nitrogen Addition on Soil Microbial Communities and Functions
Cited by: 25
Author(s): Zongwei Xia, Jingyi Yang, Changpeng Sang, Xu Wang, Lin Sun, Ping Jiang, Chao Wang, Edith Bai
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8091363

Faecal Microbiota of Dogs Offered a Vegetarian Diet with or without the Supplementation of Feather Meal and either Cornmeal, Rye or Fermented Rye: A Preliminary Study
Cited by: 6
Author(s): Julia Hankel, Amr Abd El‐Wahab, Richard Grone, Birgit Keller, Eric Galvez, Till Strowig, Christian Visscher
Software Mentions: 1
Published: almost 6 years ago

10.3390/jof6030100

Lipid Species in the GI Tract are Increased by the Commensal Fungus Candida albicans and Decrease the Virulence of Clostridioides difficile
Cited by: 5
Author(s): Jesús A. Romo, Laura Markey, Carol A. Kumamoto
Software Mentions: 1
Published: about 6 years ago

10.3390/microorganisms7100392

Mediterranean Native Leguminous Plants: A Reservoir of Endophytic Bacteria with Potential to Enhance Chickpea Growth under Stress Conditions
Cited by: 17
Author(s): Clarisse Brı́gido, Esther Menéndez, Ana Paço, Bernard R. Glick, Anabela D. F. Belo, Maria R. Félix, Marina Vieira de Carvalho
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-34761-5

The effect of drinking water pH on the human gut microbiota and glucose regulation: results of a randomized controlled cross-over intervention
Cited by: 23
Author(s): Torben Hansen, Mette Torp Thomassen, Mia Madsen, Timo Kern, Emilie Glad Bak, Alireza Kashani, Kristine H. Allin, Torben Hansen, Oluf Pedersen
Software Mentions: 1
Published: almost 8 years ago

10.3390/microorganisms8020170

Revealing the Variation and Stability of Bacterial Communities in Tomato Rhizosphere Microbiota
Cited by: 33
Author(s): Zhiqiang Cheng, Shaonan Lei, Ye Li, Wei Huang, Rongqin Ma, Juan Xiong, Ting Zhang, Lingyue Jin, Hafeez Ul Haq, Xiaohong Xu, Baoyu Tian
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-34556-8

Functional traits of a native and an invasive clam of the genus Ruditapes occurring in sympatry in a coastal lagoon
Cited by: 5
Author(s): Marta Lobão Lopes, Joana Patrício Rodrigues, Daniel Crespo, Marina Dolbeth, Ricardo Calado, Ana I. Lillebø
Software Mentions: 1
Published: almost 8 years ago

10.3390/microorganisms8091278

Effect of Sample Collection (Manual Expression vs. Pumping) and Skimming on the Microbial Profile of Human Milk Using Culture Techniques and Metataxonomic Analysis
Cited by: 11
Author(s): Maricela Rodríguez‐Cruz, Claudio Alba, Marina Aparicio, María Ángeles Checa, Leónides Fernández, Juan Miguel Díaz Rodríguez
Software Mentions: 1
Published: almost 6 years ago

10.3390/microorganisms9081755

The Effect of Common Viral Inactivation Techniques on 16S rRNA Amplicon-Based Analysis of the Gut Microbiota
Cited by: 0
Author(s): Zachary L. McAdams, Kevin L. Gustafson, Aaron C. Ericsson
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-018-35549-3

Nitrogen acquisition and resource allocation strategies in temperate seagrass Zostera nigricaulis: Uptake, assimilation and translocation processes
Cited by: 6
Author(s): Sasi Nayar, Maylene Loo, Jason E. Tanner, Andrew R. Longmore, Gregory P. Jenkins
Software Mentions: 1
Published: over 7 years ago

10.1186/s40168-017-0345-8

Preparing for the crewed Mars journey: microbiota dynamics in the confined Mars500 habitat during simulated Mars flight and landing
Cited by: 42
Author(s): Petra Schwendner, Alexander Mahnert, Kaisa Koskinen, Christine Moissl-Eichinger, Simon Barczyk, Reinhard Wirth, Gabriele Berg, Petra Rettberg
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-018-36266-7

Obesity Aggravates Acute Pancreatitis via Damaging Intestinal Mucosal Barrier and Changing Microbiota Composition in Rats
Cited by: 23
Author(s): Ya Cheng, Ling Liu, Xiao Ma, Huan Tong, Jinhang Gao, Yang Tai, Libin Huang, Chengwei Tang, Rui Wang
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-36478-x

Multi-locus DNA metabarcoding of zooplankton communities and scat reveal trophic interactions of a generalist predator
Cited by: 39
Author(s): Emma L. Carroll, Ramón Gallego, Mary A. Sewell, John Zeldis, Louis Ranjard, Howard A. Ross, Leah Tooman, Richard O’Rorke, Richard D. Newcomb, Rochelle Constantine
Software Mentions: 1
Published: over 7 years ago

10.3390/antibiotics10030269

Allium Extract Implements Weaned Piglet’s Productive Parameters by Modulating Distal Gut Microbiota
Cited by: 15
Author(s): Miguel Rabelo-Ruiz, Claudia Teso-Pérez, Juan Manuel Peralta‐Sánchez, Juan José Ariza, Antonio Manuel Martín-Platero, Óscar Casabuena-Rincón, Patricia Vázquez-Chas, Enrique Guillamón, M. A. Aguinaga, Mercedes Maqueda, Eva Valdivia, Alberto Baños, Manuel Martínez‐Bueno
Software Mentions: 1
Published: over 5 years ago

10.3390/antibiotics10060643

Core Altered Microorganisms in Colitis Mouse Model: A Comprehensive Time-Point and Fecal Microbiota Transplantation Analysis
Cited by: 41
Author(s): Lijun Shang, Hongbin Liu, Haitao Yu, Meixia Chen, Tianren Yang, Xiangfang Zeng, Shiyan Qiao
Software Mentions: 1
Published: about 5 years ago

10.1186/s40168-020-00915-9

Soil origin and plant genotype structure distinct microbiome compartments in the model legume Medicago truncatula
Cited by: 78
Author(s): Shawn P. Brown, Michael A. Grillo, Justin C. Podowski, Katy D. Heath
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-37162-w

Mixed Viral-Bacterial Infections and Their Effects on Gut Microbiota and Clinical Illnesses in Children
Cited by: 45
Author(s): Shilu Mathew, Maria K. Smatti, Khalid Al Ansari, Gheyath K. Nasrallah, Asmaa A. Al Thani, Hadi M. Yassine
Software Mentions: 1
Published: over 7 years ago

10.1186/s40168-021-01109-7

Bacterial colonization dynamics and antibiotic resistance gene dissemination in the hospital environment after first patient occupancy: a longitudinal metagenetic study
Cited by: 8
Author(s): Tilman E. Klassert, Rasmus Leistner, Cristina Zubiría-Barrera, Magdalena Stock, Marta López, Robert Neubert, Dominik Driesch, Petra Gastmeier, Hortense Slevogt
Software Mentions: 1
Published: about 5 years ago

10.1093/aob/mcy233

Embolism resistance in stems of herbaceous Brassicaceae and Asteraceae is linked to differences in woodiness and precipitation
Cited by: 28
Author(s): Larissa Chacon Dória, Cynthia Meijs, Diego Sotto Podadera, Marcelino del Arco, Erik Smets, Sylvain Delzon, Frédéric Lens
Software Mentions: 1
Published: over 7 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292