cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2020.01016

The Composition and Function of Microbiomes Within Microcystis Colonies Are Significantly Different Than Native Bacterial Assemblages in Two North American Lakes
Cited by: 35
Author(s): Jennifer G. Jankowiak, Christopher J. Gobler
Software Mentions: 1
Published: about 6 years ago

10.3389/fvets.2021.623899

Bacteriophage as an Alternative to Antibiotics Promotes Growth Performance by Regulating Intestinal Inflammation, Intestinal Barrier Function and Gut Microbiota in Weaned Piglets
Cited by: 28
Author(s): Yongdi Zeng, Zi-Rui Wang, Tiande Zou, Jun Chen, Guanhong Li, Liuzhen Zheng, Shuo Li, Jinming You
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0192579

Correction: First evidence of biogenic habitat from tubeworms providing a near-absolute habitat requirement for high-intertidal Ulva macroalgae
Cited by: 0
Author(s): Kiran Liversage
Software Mentions: 1
Published: over 8 years ago

10.1186/2241-5793-21-10

Benthic molluscan macrofauna structure in heavily trawled sediments (Thermaikos Gulf, North Aegean Sea): spatiotemporal patterns
Cited by: 7
Author(s): Charalampos Dimitriadis, Drosos Koutsoubas, Zoi Garyfalou, Α. Τσελεπίδης
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0105852

Habitat-Specific Density and Diet of Rapidly Expanding Invasive Red Lionfish, Pterois volitans, Populations in the Northern Gulf of Mexico
Cited by: 86
Author(s): Kristen A. Dahl, William F. Patterson
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2017.00196

Variable Colonization after Reciprocal Fecal Microbiota Transfer between Mice with Low and High Richness Microbiota
Cited by: 51
Author(s): Aaron C. Ericsson, Alexa R. Personett, Giedre Turner, Rebecca A. Dorfmeyer, Craig L. Franklin
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0228085

Respiratory dysbiosis and population-wide temporal dynamics in canine chronic bronchitis and non-inflammatory respiratory disease
Cited by: 6
Author(s): Aaron C. Ericsson, Alexa R. Personett, Hansjörg Rindt, Megan Grobman, Carol R. Reinero
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0137527

Different Oceanographic Regimes in the Vicinity of the Antarctic Peninsula Reflected in Benthic Nematode Communities
Cited by: 16
Author(s): Freija Hauquier, Laura Durán Suja, Julian Gutt, Gritta Veit-Köhler, Ann Vanreusel
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0134345

Environmental Filtering of Microbial Communities in Agricultural Soil Shifts with Crop Growth
Cited by: 59
Author(s): Sarah K. Hargreaves, Ryan J. Williams, Kirsten Hofmockel
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0154270

Experimental Assessment of the Effects of Temperature and Food Availability on Particle Mixing by the Bivalve Abra alba Using New Image Analysis Techniques
Cited by: 13
Author(s): Guillaume Bernard, Jean-Claude Duchêne, Alicia Romero-Ramirez, Pascal Lécroart, Olivier Maire, Aurélie Ciutat, Bruno Deflandre, Antoine Grémare
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0179023

Short-term alteration of biotic and abiotic components of the pelagic system in a shallow bay produced by a strong natural hypoxia event
Cited by: 8
Author(s): Eduardo Hernández‐Miranda, Rodrigo Veas, Valeria Anabalón, Renato A. Quiñones
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0163374

Influence of Benthic Macrofauna as a Spatial Structuring Agent for Juvenile Haddock (Melanogrammus aeglefinus) on the Eastern Scotian Shelf, Atlantic Canada
Cited by: 4
Author(s): Beatriz Rincón, Ellen Kenchington
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0219100

Artisans and dugout canoes reveal pieces of Atlantic Forest history
Cited by: 2
Author(s): Laís Lima de Paula, Michele de Sá Dechoum, Viviane Stern da Fonseca-Kruel, Neusa Tamaio, Natália Hanazaki
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0060010

Calcification by Reef-Building Sclerobionts
Cited by: 31
Author(s): Jennie Mallela
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0024885

Tracking Signals of Change in Mediterranean Fish Diversity Based on Local Ecological Knowledge
Cited by: 152
Author(s): Ernesto Azzurro, Paula S. Moschella, Francesc Maynou
Software Mentions: 1
Published: almost 15 years ago

10.1111/1751-7915.13417

Long‐term microbial community dynamics at two full‐scale biotrickling filters treating pig house exhaust air
Cited by: 8
Author(s): Caroline Van der Heyden, Tom De Mulder, Eveline Volcke, Peter Demeyer, Marc Heyndrickx, Geertrui Rasschaert
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0108630

Effects of Ocean Acidification on the Brown Alga Padina pavonica: Decalcification Due to Acute and Chronic Events
Cited by: 13
Author(s): Teba Gil-Díaz, Ricardo Haroun, Fernando Tuya, Séfora Betancor, María Ascensión Viera-Rodríguez
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0115225

The Antipsychotic Olanzapine Interacts with the Gut Microbiome to Cause Weight Gain in Mouse
Cited by: 135
Author(s): Andrew P. Morgan, James J. Crowley, Randal J. Nonneman, Corey R. Quackenbush, Cheryl N. Miller, Allison Ryan, Molly A. Bogue, Sur Herrera Paredes, Scott Yourstone, Ian M. Carroll, Thomas H. Kawula, Maureen A. Bower, R. Balfour Sartor, Patrick F. Sullivan
Software Mentions: 1
Published: over 11 years ago

10.1111/1751-7915.13461

Aquatic microbial diversity associated with faecal pollution of Norwegian waterbodies characterized by 16S rRNA gene amplicon deep sequencing
Cited by: 15
Author(s): Lisa Paruch, Adam M. Paruch, Hans Geir Eiken, Roald Sørheim
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0195352

Successional dynamics of marine fouling hydroids (Cnidaria: Hydrozoa) at a finfish aquaculture facility in the Mediterranean Sea
Cited by: 10
Author(s): Luis Martell, Roberta Bracale, Steven A. Carrion, Jennifer E. Purcell, Marco Lezzi, Cinzia Gravili, Stefano Piraino, Ferdinando Boero
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0075767

Conserving Biodiversity in a Human-Dominated World: Degradation of Marine Sessile Communities within a Protected Area with Conflicting Human Uses
Cited by: 52
Author(s): Valeriano Parravicini, Fiorenza Micheli, Monica Montefalcone, Carla Morri, Elisa Villa, Michela Castellano, Paolo Pedrini, Carlo Nike Bianchi
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0131080

Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps
Cited by: 1,567
Author(s): Lisa A. Levin, Guillermo Mendoza, Benjamin M. Grupe, Jennifer P. Gonzalez, Brittany M. Jellison, Greg W. Rouse, Andrew R. Thurber, Anders Warén
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0144051

Spatial and Dietary Overlap Creates Potential for Competition between Red Snapper (Lutjanus campechanus) and Vermilion snapper (Rhomboplites aurorubens)
Cited by: 12
Author(s): William T. Davis, J. Marcus Drymon, Sean P. Powers
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2018.00317

Assessing the Influence of Vegan, Vegetarian and Omnivore Oriented Westernized Dietary Styles on Human Gut Microbiota: A Cross Sectional Study
Cited by: 73
Author(s): Carmen Losasso, Ester M. Eckert, Eleonora Mastrorilli, Jörg Villiger, Marzia Mancin, Ilaria Patuzzi, Andrea Di Cesare, Veronica Cibin, Federica Barrucci, Jakob Pernthaler, Gianluca Corno, Antonia Ricci
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2017.01325

Fertilization Shapes Bacterial Community Structure by Alteration of Soil pH
Cited by: 137
Author(s): Yuting Zhang, Hong Shen, Xinhua He, Ben W. Thomas, Newton Z. Lupwayi, Xiying Hao, Matthew C. Thomas, Xiaojun Shi
Software Mentions: 1
Published: about 9 years ago

10.7717/peerj.5276

The influence of different deep-sea coral habitats on sediment macrofaunal community structure and function
Cited by: 12
Author(s): Jill R. Bourque, Amanda W.J. Demopoulos
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2018.02627

Altered Gut Microbiota in Myasthenia Gravis
Cited by: 37
Author(s): Dongxu Qiu, Zhiwei Xia, Jiangjian Xiao, Jun Deng, Lei Zhang, Jing Li
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0252272

Apple cider vinegar soaks do not alter the skin bacterial microbiome in atopic dermatitis
Cited by: 5
Author(s): Lydia A. Luu, Richard Flowers, Yingnan Gao, Martin Wu, Sofia Gasperino, Ann Kellams, DeVon C. Preston, Barrett Zlotoff, Julia Wisniewski, Steven L. Zeichner
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.12120

A cross-sectional study of the nasal and fecal microbiota of sows from different health status within six commercial swine farms
Cited by: 1
Author(s): Andréia G. Arruda, Loïc Deblais, Vanessa L. Hale, Christopher Madden, Monique D. Pairis‐Garcia, Vishal Srivastava, Dipak Kathayat, Anand Kumar, Gireesh Rajashekara
Software Mentions: 1
Published: almost 5 years ago

10.7717/peerj.8047

Differential responses of the acidobacterial community in the topsoil and subsoil to fire disturbance in Pinus tabulaeformis stands
Cited by: 6
Author(s): Weike Li, Xiaodong Liu, Shukui Niu
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0215262

The human microbiota is associated with cardiometabolic risk across the epidemiologic transition
Cited by: 27
Author(s): Na Fei, Beatriz Peñalver Bernabé, Louise Lie, Danny Baghdan, Kweku Bedu-Addo, Jacob Plange‐Rhule, Terrence Forrester, Estelle V. Lambert, Pascal Bovet, Neil Gottel, Walter Riesen, Wolfgang Korte, Amy Luke, Stephanie Kliethermes, Brian T. Layden, Jack A. Gilbert, Lara R. Dugas
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0041100

Micro and Macro-Habitat Associations in Saproxylic Beetles: Implications for Biodiversity Management
Cited by: 62
Author(s): Joakim Hjältén, Fredrik Stenbacka, Roger Pettersson, Heloise Gibb, Therese Johansson, Kjell Danell, John P. Ball, Jacek Hilszczański
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0255083

Bacterial diversity dynamics in microbial consortia selected for lignin utilization
Cited by: 9
Author(s): Isis Viana Mendes, Mariana Botelho Garcia, Ana Carolina Araújo Bitencourt, Renata Henrique Santana, Philippe de Castro Lins, Rafaella Silveira, Blake A. Simmons, John M. Gladden, Ricardo Henrique Krüger, Betânia Ferraz Quirino
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0181531

Response of Posidonia oceanica seagrass and its epibiont communities to ocean acidification
Cited by: 28
Author(s): Katja Guilini, Miriam Weber, Dirk de Beer, M. Schneider, Massimiliano Molari, Christian Lott, Wanda Bodnar, Thibaud Mascart, Marleen De Troch, Ann Vanreusel
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0049870

Deep Coral Oases in the South Tyrrhenian Sea
Cited by: 98
Author(s): Marzia Bo, Simonepietro Canese, Costanza Spaggiari, Antonio Pusceddu, Marco Bertolino, Michela Angiolillo, Michela Giusti, Maria Filomena Loreto, Eva Salvati, Silvestro Greco, Giorgio Bavestrello
Software Mentions: 1
Published: over 13 years ago

10.1007/s00248-020-01544-3

Natural Variation in Physicochemical Profiles and Bacterial Communities Associated with Aedes aegypti Breeding Sites and Larvae on Guadeloupe and French Guiana
Cited by: 26
Author(s): Lyza Héry, Amandine Guidez, Audrey‐Anne Durand, Christelle Delannay, Josiann Normandeau-Guimond, Yann Reynaud, Jean Issaly, Daniella Goindin, Grégory Legrave, Joël Gustave, Stéphanie Raffestin, Sébastien Breurec, Philippe Constant, Isabelle Dusfour, Claude Guertin, Anubis Vega-Rúa
Software Mentions: 1
Published: about 6 years ago

10.1186/s40462-021-00255-9

How animals distribute themselves in space: energy landscapes of Antarctic avian predators
Cited by: 11
Author(s): Juan F. Masello, Andrés Barbosa, Akira Kato, Thomas Mattern, Renata Medeiros, Jennifer E. Stockdale, Marc N. Kümmel, Paco Bustamante, Josabel Belliure, Jesús Benzal, Roger Colominas‐Ciuró, Javier Menéndez-Blázquez, Sven Griep, Alexander Goesmann, William Oliver Christian Symondson, Petra Quillfeldt
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0172914

Altered gut microbiome in a mouse model of Gulf War Illness causes neuroinflammation and intestinal injury via leaky gut and TLR4 activation
Cited by: 115
Author(s): Firas Alhasson, Suvarthi Das, Ratanesh Seth, Diptadip Dattaroy, Varun Chandrashekaran, Caitlin N. Ryan, Luisa Chan, Traci L. Testerman, James B. Burch, Lorne J. Hofseth, Ronnie D. Horner, Mitzi Nagarkatti, Stephen M. Lasley, Saurabh Chatterjee
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0143921

Macrofaunal Patterns in and around du Couedic and Bonney Submarine Canyons, South Australia
Cited by: 9
Author(s): Kathleen E. Conlan, David J. Currie, Sabine Dittmann, Shirley J. Sorokin, Ed A. Hendrycks
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0059659

Edges in Agricultural Landscapes: Species Interactions and Movement of Natural Enemies
Cited by: 76
Author(s): Sarina Macfadyen, W. J. Müller
Software Mentions: 1
Published: over 13 years ago

10.3390/cancers13061341

Oral and Intravenous Iron Therapy Differentially Alter the On- and Off-Tumor Microbiota in Anemic Colorectal Cancer Patients
Cited by: 11
Author(s): Oliver Phipps, Hafid O. Al-Hassi, Mohammed Nabil Quraishi, Edward A Dickson, Jonathan Segal, Helen Steed, Aditi Kumar, Austin G Acheson, Andrew D Beggs, Matthew Brookes
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2015.01142

Pyrosequencing of the bacteria associated with Platygyra carnosus corals with skeletal growth anomalies reveals differences in bacterial community composition in apparently healthy and diseased tissues
Cited by: 19
Author(s): Jenny C.Y. Ng, Yuen-Yan Chan, Hein Min Tun, Fung Ping Leung, Paul K.S. Shin, Joanne Wing Yan Chiu
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0138230

Changes in Microbial Plankton Assemblages Induced by Mesoscale Oceanographic Features in the Northern Gulf of Mexico
Cited by: 13
Author(s): Alicia K. Williams, Alison McInnes, Jay R. Rooker, Antonietta Quigg
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0251803

Gut microbiota profiles of young South Indian children: Child sex-specific relations with growth
Cited by: 5
Author(s): Nirupama Shivakumar, Ambily Sivadas, Sarita Devi, Farook Jahoor, John McLaughlin, Craig P. Smith, Anura V Kurpad, Arpita Mukhopadhyay
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.3067

Hard time to be parents? Sea urchin fishery shifts potential reproductive contribution of population onto the shoulders of the young adults
Cited by: 16
Author(s): Barbara Loi, Ivan Guala, Rodrigo Pires da Silva, Gianni Brundu, Maura Baroli, Simone Farina
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0047561

Global Change and Response of Coastal Dune Plants to the Combined Effects of Increased Sand Accretion (Burial) and Nutrient Availability
Cited by: 34
Author(s): Silvia Frosini, Claudio Lardicci, Elena Balestri
Software Mentions: 1
Published: almost 14 years ago

10.3389/fmicb.2018.03017

The Equine Gastrointestinal Microbiome: Impacts of Age and Obesity
Cited by: 42
Author(s): Philippa K. Morrison, C. J. Newbold, Eleanor Jones, Hilary J. Worgan, Dai Grove‐White, Alex Dugdale, Clare Barfoot, Patricia A. Harris, Caroline McG. Argo
Software Mentions: 1
Published: over 7 years ago

10.3390/metabo9100229

Metabolite Changes in an Estuarine Annelid Following Sublethal Exposure to a Mixture of Zinc and Boscalid
Cited by: 12
Author(s): Georgia M. Sinclair, Allyson L. O’Brien, Michael J. Keough, David P. De Souza, Saravanan Dayalan, Komal Kanojia, Konstantinos A. Kouremenos, Dedreia Tull, Rhys A. Coleman, Oliver A.H. Jones, Sara M. Long
Software Mentions: 1
Published: almost 7 years ago

10.3390/metabo10090370

Effect of Added Dietary Betaine and Soluble Fiber on Metabolites and Fecal Microbiome in Dogs with Early Renal Disease
Cited by: 11
Author(s): Eden Ephraim, Dennis E. Jewell
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers13112514

Analysis of the Gut Microbiota: An Emerging Source of Biomarkers for Immune Checkpoint Blockade Therapy in Non-Small Cell Lung Cancer
Cited by: 16
Author(s): Feiyu Zhang, Macarena Ferrero, Ning Dong, Giuseppe D’Auria, Mariana Reyes-Prieto, Alejandro Herreros‐Pomares, Silvia Calabuig, Elena Duréndez, Francisco Aparisi, Ana Blasco, Clara B. Calderon Garcia, Carlos Camps, Eloísa Jantus‐Lewintre, Rafael Sirera
Software Mentions: 1
Published: over 5 years ago

10.3390/metabo9060112

Dynamic Changes of Plasma Metabolome in Response to Severe Feed Restriction in Pregnant Ewes
Cited by: 14
Author(s): Chang Guo, Yanfeng Xue, Hossam-eldin Seddik, Yi Yin, Fan Hu, Shengyong Mao
Software Mentions: 1
Published: about 7 years ago

10.1038/s41421-021-00245-6

Identification of an intraocular microbiota
Cited by: 25
Author(s): Yuhua Deng, Xiaofei Ge, Yan Li, Bin Zou, Xiaofeng Wen, Weirong Chen, Lin Lü, Meifen Zhang, Xiaomin Zhang, Chunmei Li, Chan Zhao, Xiaofeng Lin, Xiulan Zhang, Xinhua Huang, Xiaorong Li, Ming Jin, Guang-Hua Peng, Dongni Wang, Xun Wang, Weiyi Lai, Juanran Liang, Jing Jing Li, Qiaoxing Liang, Yang Liu, Qinfen Zhang, Yinyin Li, Ping Lü, Xiao Hu, Xifang Li, Xiaoyi Deng, Yu Liu, Yanli Zou, Shixin Guo, Tingting Chen, Yali Qin, Fuhua Yang, Miao Li, Wei Chen, Chi‐Chao Chan, Hanqing Lin, Yizhi Liu, Richard W. Lee, Lai Wei
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0222798

The negative effects of short-term extreme thermal events on the seagrass Posidonia oceanica are exacerbated by ammonium additions
Cited by: 30
Author(s): Yaiza Ontoria, Ainhoa Cuesta-Gracia, Juan Manuel García Ruiz, Javier Romero, Marta Pérez
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.chom.2016.04.021

Wolbachia Blocks Currently Circulating Zika Virus Isolates in Brazilian Aedes aegypti Mosquitoes
Cited by: 423
Author(s): Heverton Leandro Carneiro Dutra, Marcele Neves Rocha, Fernando Braga Stehling Dias, Simone Brutman Mansur, Eric P. Caragata, Luciano Andrade Moreira
Software Mentions: 1
Published: about 10 years ago

10.1186/1742-9994-9-38

Do host species evolve a specific response to slave-making ants?
Cited by: 7
Author(s): Olivier Delattre, Rumsaïs Blatrix, Nicolas Châline, Stéphane Chameron, Anne Fédou, Chloé Leroy, Pierre Jaisson
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0051503

Functioning of a Shallow-Water Sediment System during Experimental Warming and Nutrient Enrichment
Cited by: 27
Author(s): Christian Alsterberg, Kristina Sundbäck, Stefan Hulth
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0101701

Within-Otolith Variability in Chemical Fingerprints: Implications for Sampling Designs and Possible Environmental Interpretation
Cited by: 15
Author(s): Antonio Franco, Fabio Bulleri, Antonio Pennetta, Giuseppe E. De Benedetto, K.R. Clarke, Paolo Guidetti
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0094111

Nitrate Reduction Functional Genes and Nitrate Reduction Potentials Persist in Deeper Estuarine Sediments. Why?
Cited by: 43
Author(s): Sokratis Papaspyrou, Cindy J. Smith, Lixin Dong, Corinne Whitby, Alex J. Dumbrell, David B. Nedwell
Software Mentions: 1
Published: over 12 years ago

10.3390/cells9040906

A Commercial Probiotic Induces Tolerogenic and Reduces Pathogenic Responses in Experimental Autoimmune Encephalomyelitis
Cited by: 26
Author(s): Laura Calvo-Barreiro, Herena Eixarch, Manuel Ponce-Alonso, Mireia Castillo, Rafael Lebrón-Galán, Leyre Mestre, Carmen Guaza, Diego Clemente, Rosa del Campo, Xavier Montalbán, Carmen Espejo
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2019.00438

Dysbiosis of Skin Microbiota in Psoriatic Patients: Co-occurrence of Fungal and Bacterial Communities
Cited by: 70
Author(s): Zuzana Stehlíková, Martin Kostovčík, Klara Kostovcikova, Miloslav Kverka, Kateřina Jůzlová, Filip Rob, Jana Hercogová, P. Boháč, Yishay Pinto, Atara Uzan, Omry Koren, Helena Tlaskalová‐Hogenová, Zuzana Jirásková Zákostelská
Software Mentions: 1
Published: over 7 years ago

10.1186/s12983-016-0134-4

Feeding cessation alters host morphology and bacterial communities in the ascidian Pseudodistoma crucigaster
Cited by: 10
Author(s): Susanna López‐Legentil, Xavier Turon, Patrick M. Erwin
Software Mentions: 1
Published: over 10 years ago

10.3390/cells10071732

Obesity-Induced Dysbiosis Exacerbates IFN-γ Production and Pulmonary Inflammation in the Mycobacterium tuberculosis Infection
Cited by: 5
Author(s): Sandra Patricia Palma Albornoz, Thais Fernanda de Campos Fraga-Silva, Ana Flávia Gembre, Rômulo Silva de Oliveira, Fernanda Mesquita de Souza, Tamara Silva Rodrigues, Ísis do Carmo Kettelhut, Camila Sanches Manca, Alceu Afonso Jordão, Leandra Náira Zambelli Ramalho, Paulo Eduardo Martins Ribolla, Daniela Carlos, Vânia Luiza Deperon Bonato
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.568224

Exopolysaccharide Features Influence Growth Success in Biocrust-forming Cyanobacteria, Moving From Liquid Culture to Sand Microcosms
Cited by: 19
Author(s): Sonia Chamizo, Alessandra Adessi, Giuseppe Torzillo, Roberto De Philippis
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0053742

Impacts on Coralligenous Outcrop Biodiversity of a Dramatic Coastal Storm
Cited by: 75
Author(s): Núria Teixidó, Edgar Casas, Emma Cebrián, Cristina Linares, Joaquim Garrabou
Software Mentions: 1
Published: over 13 years ago

10.1186/s13568-018-0599-y

Microbial community and diversity in the feces of Sichuan takin (Budorcas taxicolor tibetana) as revealed by Illumina Miseq sequencing and quantitative real-time PCR
Cited by: 4
Author(s): Hongxiang Zhu, Dong Zeng, Ning Wang, Lili Niu, Yi Zhou, Yan Zeng, Xueqin Ni
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2018.02160

Microbiome Interaction Networks and Community Structure From Laboratory-Reared and Field-Collected Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus Mosquito Vectors
Cited by: 101
Author(s): Shivanand Hegde, Kamil Khanipov, Levent Albayrak, George Golovko, Maria Pimenova, Miguel A. Saldaña, Mark Rojas, Emily A. Hornett, Greg C. Motl, Chris Fredregill, James A. Dennett, Mustapha Debboun, Yuriy Fofanov, Grant L Hughes
Software Mentions: 1
Published: almost 8 years ago

10.3390/cells8010033

Preventive Effect of Spontaneous Physical Activity on the Gut-Adipose Tissue in a Mouse Model That Mimics Crohn’s Disease Susceptibility
Cited by: 9
Author(s): Florie Maillard, Emilie Vazeille, Pierre Sauvanet, Pascal Sirvent, Richard Bonnet, Lydie Combaret, Pierre Chaussé, Caroline Chevarin, Yolanda F. Otero, Geoffrey Delcros, Vivien Chavanelle, Nathalie Boisseau, Nicolas Barnich
Software Mentions: 1
Published: over 7 years ago

10.3390/cells9122705

Mgll Knockout Mouse Resistance to Diet-Induced Dysmetabolism Is Associated with Altered Gut Microbiota
Cited by: 21
Author(s): Niokhor Dione, Sébastien Lacroix, Ulrike Taschler, Thomas Deschênes, Armita Abolghasemi, Nadine Leblanc, Vincenzo Di Marzo, Cristoforo Silvestri
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.3006

Random sampling causes the low reproducibility of rare eukaryotic OTUs in Illumina COI metabarcoding
Cited by: 114
Author(s): Matthieu Leray, Nancy Knowlton
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.5630

Potential impacts of finfish aquaculture on eelgrass (Zostera marina) beds and possible monitoring metrics for management: a case study in Atlantic Canada
Cited by: 12
Author(s): Nakia Cullain, Reba McIver, Allison L. Schmidt, Inka Milewski, Heike K. Lotze
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0080536

Bleaching Susceptibility and Recovery of Colombian Caribbean Corals in Response to Water Current Exposure and Seasonal Upwelling
Cited by: 36
Author(s): Elisa Bayraktarov, Valeria Pizarro, Corvin Eidens, Thomas Wilke, Christian Wild
Software Mentions: 1
Published: over 12 years ago

10.1007/s00572-020-01015-0

Ectomycorrhizal fungal community structure in a young orchard of grafted and ungrafted hybrid chestnut saplings
Cited by: 6
Author(s): Serena Santolamazza‐Carbone, Laura Iglesias-Bernabé, Esteban Sinde-Stompel, Pedro Pablo Ferrer Gallego
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2016.01823

Bacterial Active Community Cycling in Response to Solar Radiation and Their Influence on Nutrient Changes in a High-Altitude Wetland
Cited by: 23
Author(s): Verónica Molina, Klaudia L. Hernández, Cristina Dorador, Yoanna Eissler, Martha Hengst, Vilma Pérez, Chris Harrod
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0060830

Which Environmental Factors Predict Seasonal Variation in the Coral Health of Acropora digitifera and Acropora spicifera at Ningaloo Reef?
Cited by: 13
Author(s): Saskia Hinrichs, Nicole L. Patten, Ming Feng, Daniel Strickland, Anya M. Waite
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2021.681983

Microbial Diversity and Metabolite Profile of Fermenting Millet in the Production of Hausa koko, a Ghanaian Fermented Cereal Porridge
Cited by: 4
Author(s): Amy Atter, María Díaz, Kwaku Tano‐Debrah, Angela Parry‐Hanson Kunadu, Melinda J. Mayer, Ian J. Colquhoun, Dennis Sandris Nielsen, David Baker, Arjan Narbad, Wisdom Kofi Amoa-Awua
Software Mentions: 1
Published: about 5 years ago

10.1186/s13601-019-0260-0

Cofactors of wheat-dependent exercise-induced anaphylaxis do not increase highly individual gliadin absorption in healthy volunteers
Cited by: 22
Author(s): Katharina Anne Scherf, Ann Christin Lindenau, Luzia Valentini, María Carmen Collado, Izaskun García-Mantrana, Morten Junker Christensen, Dirk Tomsitz, Claudia Kugler, Tilo Biedermann, Knut Brockow
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0232689

Effect of age and the individual on the gastrointestinal bacteriome of ponies fed a high-starch diet
Cited by: 5
Author(s): Philippa K. Morrison, C. J. Newbold, Eleanor Jones, Hilary J. Worgan, Dai Grove‐White, Alex Dugdale, Clare Barfoot, Patricia A. Harris, Caroline McG. Argo
Software Mentions: 1
Published: over 6 years ago

10.14309/ctg.0000000000000235

Relationship of the Esophageal Microbiome and Tissue Gene Expression and Links to the Oral Microbiome: A Randomized Clinical Trial
Cited by: 11
Author(s): Medini K. Annavajhala, Michael May, Griselda Compres, Daniel E. Freedberg, Roseanna Graham, Stephania Stump, Jianwen Que, Tal Korem, Anne‐Catrin Uhlemann, Julian A. Abrams
Software Mentions: 1
Published: over 5 years ago

10.1002/ctm2.163

Tofacitinib treatment alters mucosal immunity and gut microbiota during experimental arthritis
Cited by: 3
Author(s): Julie Hablot, Maroua Ferhat, Aonghus Lavelle, Fatouma Salem, Mahdia Taieb, Jasna Medvedovic, Nadège Kindt, Pascal Reboul, F. Cailotto, Jean‐Yves Jouzeau, Gérard Eberl, Harry Sokol, David Moulin
Software Mentions: 1
Published: almost 6 years ago

10.1002/ctm2.299

Altered nitric oxide induced by gut microbiota reveals the connection between central precocious puberty and obesity
Cited by: 9
Author(s): Yinhu Li, Li Shen, Chen Huang, Xiaoyü Li, Junru Chen, Shuai Cheng Li, Bairong Shen
Software Mentions: 1
Published: over 5 years ago

10.6061/clinics/2020/e1277

Type 2 diabetes mellitus-related environmental factors and the gut microbiota: emerging evidence and challenges
Cited by: 24
Author(s): Yanfen Liu, Xueyong Lou
Software Mentions: 1
Published: over 6 years ago

10.3390/clockssleep3030025

Habitual Sleep Duration and the Colonic Mucosa-Associated Gut Microbiota in Humans—A Pilot Study
Cited by: 15
Author(s): Ritwick Agrawal, Nadim J. Ajami, Sonal Malhotra, Liang Chen, Donna L. White, Amir Sharafkhaneh, Kristi L. Hoffman, David Y. Graham, Hashem B. El–Serag, Joseph F. Petrosino, Li Jiao
Software Mentions: 1
Published: about 5 years ago

10.1590/0074-02760200427

Presence of trypanosomatids, with emphasis on Leishmania, in Rodentia and Didelphimorphia mammals of a rural settlement in the central Amazon region
Cited by: 1
Author(s): Genevere Reis Achilles, Rafael Pinto Kautzmann, Haile Dean Figueiredo Chagas, Jordam William Pereira-Silva, João Aprígio Guerra de Almeida, Fernanda Rodrigues Fonseca, Maria Nazareth Ferreira da Silva, Felipe Arley Costa Pessoa, Alessandra Nava, Claudia Maria Ríos-Velásquez
Software Mentions: 1
Published: over 5 years ago

10.1038/s42003-021-01983-9

Impact of Rap-Phr system abundance on adaptation of Bacillus subtilis
Cited by: 19
Author(s): Ramses Gallegos‐Monterrosa, Mathilde Nordgaard, Tino Barchewitz, Sonja Koppenhöfer, Balasankar Meera Priyadarshini, Balázs Bálint, Gergely Maróti, Paul Kempen, Anna Dragoš, Ákos T. Kovács
Software Mentions: 1
Published: over 5 years ago

10.4317/medoral.23041

Characteristics of the salivary microbiota in cheilitis granulomatosa
Cited by: 2
Author(s): Yang Liu, Qian Zhang, Xiaosheng Hu, Feng Chen, Hong Hua
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0116291

Determination of Factors Associated with Natural Soil Suppressivity to Potato Common Scab
Cited by: 33
Author(s): Marketa Sagova‐Mareckova, Ondřej Daniel, Marek Omelka, Václav Krištůfek, Jiří Diviš, Jan Kopecký
Software Mentions: 1
Published: over 11 years ago

10.1186/s42523-020-00072-2

Effects of aging on the skin and gill microbiota of farmed seabass and seabream
Cited by: 21
Author(s): Daniela Rosado, Marcos Pérez‐Losada, Ana Pereira, Ricardo Severino, Raquel Xavier
Software Mentions: 1
Published: over 5 years ago

10.1128/AEM.02907-20

Transmission Dynamics of Shiga Toxin-Producing Escherichia coli in New Zealand Cattle from Farm to Slaughter
Cited by: 2
Author(s): A. Springer Browne, Anne C. Midwinter, Helen Withers, Adrian L. Cookson, Patrick J. Biggs, Jonathan Marshall, Jackie Benschop, S.C. Hathaway, Lynn Rogers, Shahista Nisa, C. Reed Hranac, Taylor Winkleman, Nigel French
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.02345

Lactic Acid Treatment of Cereals and Dietary Phytase Modified Fecal Microbiome Composition Without Affecting Expression of Virulence Factor Genes in Growing Pigs
Cited by: 9
Author(s): Jutamat Klinsoda, Julia Vötterl, Qendrim Zebeli, Barbara U. Metzler‐Zebeli
Software Mentions: 1
Published: almost 7 years ago

10.1128/AEM.00735-19

Optimizing the Production of Nursery-Based Biological Soil Crusts for Restoration of Arid Land Soils
Cited by: 25
Author(s): Julie Bethany, Ana Giraldo-Silva, Corey Nelson, Nichole N. Barger, Ferrán García-Pichel
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0122268

Culicidae Community Composition and Temporal Dynamics in Guapiaçu Ecological Reserve, Cachoeiras de Macacu, Rio de Janeiro, Brazil
Cited by: 28
Author(s): Jerônimo Alencar, Cecília Ferreira de Mello, Anthony Érico Guimarães, Hélcio R. Gil-Santana, Júlia dos Santos Silva, J Mallet, Raquel M. Gleiser
Software Mentions: 1
Published: over 11 years ago

10.1007/s00572-020-00977-5

Soil legacy determines arbuscular mycorrhizal spore bank and plant performance in the low Arctic
Cited by: 3
Author(s): Minna‐Maarit Kytöviita, Mauritz Vestberg
Software Mentions: 1
Published: about 6 years ago

10.1155/2020/8829072

Alterations in the Blood Parameters and Fecal Microbiota and Metabolites during Pregnant and Lactating Stages in Bama Mini Pigs as a Model
Cited by: 8
Author(s): Cui Ma, Qiankun Gao, WangHong Zhang, Md. Abul Kalam Azad, Xiangfeng Kong
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0111889

Differences in Life-Histories Refute Ecological Equivalence of Cryptic Species and Provide Clues to the Origin of Bathyal Halomonhystera (Nematoda)
Cited by: 24
Author(s): Jelle Van Campenhout, Sofie Derycke, Tom Moens, Ann Vanreusel
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2018.02785

Extreme Geochemical Conditions and Dispersal Limitation Retard Primary Succession of Microbial Communities in Gold Tailings
Cited by: 6
Author(s): Talitha Santini, Maija Raudsepp, Jessica L. Hamilton, Jasmine Nunn
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0152255

Communication at the Garden Fence – Context Dependent Vocalization in Female House Mice
Cited by: 27
Author(s): Svenja Hoier, Christine Pfeifle, Sophie von Merten, Miriam Linnenbrink
Software Mentions: 1
Published: over 10 years ago

10.1007/s00248-019-01369-9

Characterization of Bacterial Communities in Breeding Waters of Anopheles darlingi in Manaus in the Amazon Basin Malaria-Endemic Area
Cited by: 16
Author(s): Louise K. J. Nilsson, Marta Rodrigues de Oliveira, Osvaldo Marinotti, Elerson Matos Rocha, Sebastian Håkansson, Wanderli Pedro Tadei, Antônia Queiroz Lima de Souza, Olle Terenius
Software Mentions: 1
Published: over 7 years ago

10.7717/peerj.9080

Microbiome analysis of healthy and diseased sponges Lubomirskia baicalensis by using cell cultures of primmorphs
Cited by: 14
Author(s): Lubov Chernogor, E. S. Klimenko, И. В. Ханаев, С. И. Беликов
Software Mentions: 1
Published: about 6 years ago

10.1038/s42003-021-02163-5

Microbial dysbiosis reflects disease resistance in diverse coral species
Cited by: 23
Author(s): Nicholas J. MacKnight, Kathryn Cobleigh, Danielle Lasseigne, Andia Chaves‐Fonnegra, Alexandra Gutting, Bradford A. Dimos, Jendahye Antoine, Lauren E. Fuess, Contessa A. Ricci, Caleb C. Butler, Erinn M. Muller, Laura D. Mydlarz, Marilyn E. Brandt
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0009733

Benthic Composition of a Healthy Subtropical Reef: Baseline Species-Level Cover, with an Emphasis on Algae, in the Northwestern Hawaiian Islands
Cited by: 53
Author(s): Peter S. Vroom, Cristi L. Braun
Software Mentions: 1
Published: over 16 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292