cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.7717/peerj.6534

The Koala (Phascolarctos cinereus) faecal microbiome differs with diet in a wild population
Cited by: 37
Author(s): Kylie L. Brice, Pankaj Trivedi, Thomas C. Jeffries, Michaela D. J. Blyton, Christopher Mitchell, Brajesh K. Singh, Ben D. Moore
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0140725

Characterization of Bacterial Communities Associated with the Tyrian Purple Producing Gland in a Marine Gastropod
Cited by: 13
Author(s): Ajit Kumar Ngangbam, Abdul Baten, Daniel Le Waters, Steve W Whalan, Kirsten Benkendorff
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0217165

The composition of bacterial communities associated with plastic biofilms differs between different polymers and stages of biofilm succession
Cited by: 176
Author(s): Maria Pinto, Teresa M. Langer, Thorsten Hüffer, Thilo Hofmann, Gerhard J. Herndl
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0026695

The Response of Thalassiosira pseudonana to Long-Term Exposure to Increased CO2 and Decreased pH
Cited by: 102
Author(s): Katharine J. Crawfurd, John A. Raven, Glen Wheeler, Emily J. Baxter, Ian Joint
Software Mentions: 1
Published: almost 15 years ago

10.1038/s41598-020-74586-9

Microbial community dynamics in phyto-thermotherapy baths viewed through next generation sequencing and metabolomics approach
Cited by: 4
Author(s): Elena Franciosi, Luca Narduzzi, Antonella Paradiso, Silvia Carlin, Kieran Tuohy, Alberto Beretta, Fulvio Mattivi
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-75117-2

Trophic downgrading reduces spatial variability on rocky reefs
Cited by: 7
Author(s): Matthew S. Edwards, Brenda Konar
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-75229-9

Increased intestinal permeability and gut dysbiosis in the R6/2 mouse model of Huntington’s disease
Cited by: 49
Author(s): Tiberiu Loredan Stan, Rana Soylu-Kucharz, Stephen Burleigh, Olena Prykhodko, Ling Cao, Naomi Franke, Marie Sjögren, Caroline Haikal, Frida Fåk Hållenius, Maria Björkqvist
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-75370-5

Interannual variability in the lipid and fatty acid profiles of east Australia-migrating humpback whales (Megaptera novaeangliae) across a 10-year timeline
Cited by: 15
Author(s): Jasmin Groß, Patti Virtue, Peter D. Nichols, Pascale Eisenmann, Courtney Waugh, Susan Bengtson Nash
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-75026-4

Effects of long-lasting social isolation and re-socialization on cognitive performance and brain activity: a longitudinal study in Octodon degus
Cited by: 27
Author(s): Daniela Rivera, Carolina B. Lindsay, Carolina A. Oliva, Juan Francisco Codocedo, Francisco Bozinovic, Nibaldo C. Inestrosa
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-75452-4

Drivers of tropical soil invertebrate community composition and richness across tropical secondary forests using DNA metasystematics
Cited by: 5
Author(s): Katie M. McGee, Teresita M. Porter, Michael Wright, Mehrdad Hajibabaei
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0188806

Principal component and discriminant analyses as powerful tools to support taxonomic identification and their use for functional and phylogenetic signal detection of isolated fossil shark teeth
Cited by: 36
Author(s): Giuseppe Marramà, Jürgen Kriwet
Software Mentions: 1
Published: over 8 years ago

10.3390/ijerph18115667

Assessment of Irrigation Water Use Efficiency in Citrus Orchards Using AHP
Cited by: 5
Author(s): Rocío Poveda-Bautista, Bernat Roig Merino, H. Puerto, Juan Buitrago‐Vera
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.3067

Hard time to be parents? Sea urchin fishery shifts potential reproductive contribution of population onto the shoulders of the young adults
Cited by: 16
Author(s): Barbara Loi, Ivan Guala, Rodrigo Pires da Silva, Gianni Brundu, Maura Baroli, Simone Farina
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-76188-x

Increase in temperature enriches heat tolerant taxa in Aedes aegypti midguts
Cited by: 20
Author(s): Gorreti Maria Onyango, M. Sean Bialosuknia, Fred Payne, Nicholas Mathias, Alexander T. Ciota, D. Laura Kramer
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0092193

Exercise Prevents Weight Gain and Alters the Gut Microbiota in a Mouse Model of High Fat Diet-Induced Obesity
Cited by: 425
Author(s): Christian C. Evans, Kathy J. LePard, Jeff Kwak, Mary C. Stancukas, Samantha Laskowski, Joseph D. Dougherty, Laura J. Moulton, A. Glawe, Yunwei Wang, Vanessa Leone, Dionysios A. Antonopoulos, Dan Smith, Eugene B. Chang, Mae J. Ciancio
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0212842

Benthic community succession on artificial and natural coral reefs in the northern Gulf of Aqaba, Red Sea
Cited by: 22
Author(s): Emily Higgins, Robert Eric Scheibling, Kelsey M. Desilets, Anna Meta×as
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-76545-w

Pelvic bone morphometric analysis in the dugong (Dugong dugon)
Cited by: 2
Author(s): Korakot Nganvongpanit, Phaothep Cherdsukjai, Burin Boonsri, Kittisak Buddhachat, Patcharaporn Kaewmong, Kongkiat Kittiwattanawong
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0043063

Copepods in Turbid Shallow Soda Lakes Accumulate Unexpected High Levels of Carotenoids
Cited by: 17
Author(s): Tobias Schneider, Alois Herzig, Karin A. Koinig, Rubén Sommaruga
Software Mentions: 1
Published: about 14 years ago

10.1038/s41598-020-76858-w

Seasonal patterns in stable isotope and fatty acid profiles of southern stingrays (Hypanus americana) at Stingray City Sandbar, Grand Cayman
Cited by: 3
Author(s): Lisa A. Hoopes, Tonya M. Clauss, Nicole E. Browning, Alexa J. Delaune, Bradley M. Wetherbee, Jessica C. Harvey, Guy Harvey
Software Mentions: 1
Published: almost 6 years ago

10.7717/peerj.10857

Sheath-tailed bats (Chiroptera: Emballonuridae) from the early Pleistocene Rackham’s Roost Site, Riversleigh World Heritage Area, and the distribution of northern Australian emballonurid species
Cited by: 0
Author(s): Tyler R. King, Troy Myers, Kyle N. Armstrong, Michael Archer, Suzanne J. Hand
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0174855

A coral-algal phase shift in Mesoamerica not driven by changes in herbivorous fish abundance
Cited by: 67
Author(s): Jesús Ernesto Arias‐González, Tak Fung, Robert M. Seymour, Joaquín Rodrigo Garza-Pérez, Gilberto Acosta‐González, Yves‐Marie Bozec, Craig R. Johnson
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-76817-5

Impairment of microbial and meiofaunal ecosystem functions linked to algal forest loss
Cited by: 8
Author(s): Silvia Bianchelli, Roberto Danovaro
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0022950

Transcriptome Fingerprinting Analysis: An Approach to Explore Gene Expression Patterns in Marine Microbial Communities
Cited by: 5
Author(s): Montserrat Coll-Lladó, Silvia G. Acinas, Cristina Pujades, Carlos Pedrós-Alió
Software Mentions: 1
Published: about 15 years ago

10.3390/ijerph18179042

Contamination of Hospital Surfaces with Bacterial Pathogens under the Current COVID-19 Outbreak
Cited by: 5
Author(s): Andrei A. Pochtovyi, Daria V. Vasina, Daria D. Kustova, Elizaveta V. Divisenko, Nadezhda A. Kuznetsova, О. А. Бургасова, Л В Колобухина, Artem P. Tkachuk, Vladimir A. Gushchin, Alexander L. Gintsburg
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0207395

Functional diversity and nutritional content in a deep-sea faunal assemblage through total lipid, lipid class, and fatty acid analyses
Cited by: 29
Author(s): Camilla Parzanini, Christopher C. Parrish, Jean‐François Hamel, Annie Mercier
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-021-92870-0

Mucosa-associated gut microbiota reflects clinical course of ulcerative colitis
Cited by: 17
Author(s): Yunosuke Nishihara, Hitoshi Ogino, Masaru Tanaka, Eikichi Ihara, Keita Fukaura, Kusuki Nishioka, Takatoshi Chinen, Yoshimasa Tanaka, Jiro Nakayama, Dongchon Kang, Yoshihiro Ogawa
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-92962-x

A unique volatile signature distinguishes malaria infection from other conditions that cause similar symptoms
Cited by: 5
Author(s): Hannier Pulido, Nina M. Stanczyk, Consuelo Μ. De Moraes, Mark C. Mescher
Software Mentions: 1
Published: about 5 years ago

10.2196/14771

Targeting the Infant Gut Microbiota Through a Perinatal Educational Dietary Intervention: Protocol for a Randomized Controlled Trial
Cited by: 9
Author(s): Samantha L. Dawson, Jeffrey M. Craig, Gerard Clarke, Mohammadreza Mohebbi, Phillip Dawson, Mimi L.K. Tang, Felice N. Jacka
Software Mentions: 1
Published: almost 7 years ago

10.1155/2021/6665563

The Gut Microbiota and Its Relevance to Peripheral Lymphocyte Subpopulations and Cytokines in Patients with Rheumatoid Arthritis
Cited by: 23
Author(s): Yuan Li, Shengxiao Zhang, Xu-Fang Yin, Mingxing Zhang, Jun Qiao, Xu Xin, M. J. Chang, Chong Gao, Yafeng Li, Xiaofeng Li
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.1170

Cryptic species obscure introduction pathway of the blue Caribbean sponge (Haliclona(Soestella)caerulea), (order: Haplosclerida) to Palmyra Atoll, Central Pacific
Cited by: 12
Author(s): Ingrid S. Knapp, Zac H. Forsman, Gareth J. Williams, Robert J. Toonen, James J. Bell
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-021-93426-y

Recent expansion of marine protected areas matches with home range of grey reef sharks
Cited by: 8
Author(s): Lucas Bonnin, David Mouillot, Germain Boussarie, William D. Robbins, Jérémy J. Kiszka, Laurent Dagorn, Laurent Vigliola
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93779-4

Comparative analysis of oral-gut microbiota between captive and wild long-tailed macaque in Thailand
Cited by: 13
Author(s): Vorthon Sawaswong, Kesmanee Praianantathavorn, Prangwalai Chanchaem, Ariya Khamwut, Taratorn Kemthong, Yohei Hamada, Suchinda Malaivijitnond, Sunchai Payungporn
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0241183

Acidification decreases microbial community diversity in the Salish Sea, a region with naturally high pCO2
Cited by: 6
Author(s): Lisa T. Crummett
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0227362

Morphological consequences of artificial cranial deformation: Modularity and integration
Cited by: 8
Author(s): Thomas A. Püschel, Martin Frieß, Germán Manríquez
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0189930

Marine biodiversity at the end of the world: Cape Horn and Diego Ramírez islands
Cited by: 30
Author(s): Alan M. Friedlander, Enric Ballesteros, Tom W. Bell, Jonatha Giddens, Brad Henning, Mathias Hüne, Alex Muñoz, Pelayo Salinas‐de‐León, Enric Sala
Software Mentions: 1
Published: over 8 years ago

10.1007/s00442-018-4242-z

Rodents, not birds, dominate predation-related ecosystem services and disservices in vertebrate communities of agricultural landscapes
Cited by: 29
Author(s): Matthias Tschumi, Johan Ekroos, Cecilia Hjort, Henrik G. Smith, Klaus Birkhofer
Software Mentions: 1
Published: almost 8 years ago

10.7717/peerj.10860

Social behavior of musk deer during the mating season potentially influences the diversity of their gut microbiome
Cited by: 3
Author(s): Jianmei Li, Wei Luo, Yudong Zhu, Qinlong Dai, Guoqi Liu, Chengli Zheng, Lei Zhou, Shengqiang Li, Zhu Chen, Jianming Wang, Dayong Feng, Kunlin Yang, Yang Zhang, Lifeng Zhu
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0017115

Spatial Patterns in Herbivory on a Coral Reef Are Influenced by Structural Complexity but Not by Algal Traits
Cited by: 83
Author(s): Adriana Vergés, Mathew A. Vanderklift, Christopher Doropoulos, Glenn A. Hyndes
Software Mentions: 1
Published: over 15 years ago

10.1038/s41598-021-94507-8

Minimal-moderate variation of human oral virome and microbiome in IgA deficiency
Cited by: 4
Author(s): Maria José de la Cruz Peña, Luis Ignacio González‐Granado, Inmaculada García-Heredia, Lucia Maestre Carballa, Manuel Martínez‐García
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94572-z

Clostridium butyricum enhances colonization resistance against Clostridioides difficile by metabolic and immune modulation
Cited by: 16
Author(s): Mao Hagihara, Tadashi Ariyoshi, Yasutoshi Kuroki, Shuhei Eguchi, Seiya Higashi, Takeshi Mori, Tsunemasa Nonogaki, Kenta Iwasaki, Makoto Yamashita, Nobuhiro Asai, Yusuke Koizumi, Koichiro Oka, Motomichi Takahashi, Yuka Yamagishi, Hiroshige Mikamo
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.1128

Environmental influences on the Indo–Pacific octocoralIsis hippurisLinnaeus 1758 (Alcyonacea: Isididae): genetic fixation or phenotypic plasticity?
Cited by: 11
Author(s): Sonia J. Rowley, Xavier Pochon, Les Watling
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-021-94418-8

Periodontitis induces endothelial dysfunction in mice
Cited by: 8
Author(s): Maria Parvaneh, Paul K. Witting, Jaqueline Ku, Tala Moradi, Elif İnan Eroğlu, Ben Freedman, Greg T. Sutherland, Andrew N. McCorkindale, Boris Guennewig, Phannaphat Choowong, Kim Bell-Anderson, Gregory J. Cooney, Shane R. Thomas, Jörg Eberhard
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-94604-8

Local intestinal microbiota response and systemic effects of feeding black soldier fly larvae to replace soybean meal in growing pigs
Cited by: 10
Author(s): Soumya K. Kar, Dirkjan Schokker, Amy C. Harms, L. Kruijt, M.A. Smits, A.J.M. Jansman
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0133974

Inferring Phytoplankton, Terrestrial Plant and Bacteria Bulk δ¹³C Values from Compound Specific Analyses of Lipids and Fatty Acids
Cited by: 36
Author(s): Sami J. Taipale, Elina Peltomaa, Minna Hiltunen, Roger Jones, Martin W. Hahn, Christina Biasi, Michael T. Brett
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0225845

The effect of carbohydrate sources: Sucrose, invert sugar and components of mānuka honey, on core bacteria in the digestive tract of adult honey bees (Apis mellifera)
Cited by: 22
Author(s): MA Taylor, Alastair W. Robertson, Patrick J. Biggs, Kate Richards, Daniel Fiske Jones, Shanthi G. Parkar
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.9744

The influence of bait on remote underwater video observations in shallow-water coastal environments associated with the North-Eastern Atlantic
Cited by: 7
Author(s): Robyn E. Jones, Ross A. Griffin, Stephanie R. Januchowski‐Hartley, Richard K. F. Unsworth
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-94880-4

Human beta defensin levels and vaginal microbiome composition in post-menopausal women diagnosed with lichen sclerosus
Cited by: 6
Author(s): Alexandra Brunner, Márta Medvecz, Nóra Makra, Miklós Sárdy, Kinga Komka, Máté Gugolya, Dóra Szabó, Márió Gajdács, Eszter Ostorházi
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0052108

Assessing Dispersal Patterns of Fish Propagules from an Effective Mediterranean Marine Protected Area
Cited by: 44
Author(s): Antonio Franco, Giovanni Coppini, J. M. Pujolar, Giulio A. De Leo, Marino Gatto, Vladyslav Lyubartsev, Paco Melià, Lorenzo Zane, Paolo Guidetti
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0108801

Reproductive Strategies of the Insidious Fish Ectoparasite, Neobenedenia sp. (Capsalidae: Monogenea)
Cited by: 27
Author(s): Truong Dinh Hoai, Kate S. Hutson
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0068533

Host-Specific Interactions with Environmental Factors Shape the Distribution of Symbiodinium across the Great Barrier Reef
Cited by: 56
Author(s): Linda Tonk, Eugenia M. Sampayo, Scarla J. Weeks, Marites Canto, Ove Hoegh‐Guldberg
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0130053

Partitioning the Relative Importance of Phylogeny and Environmental Conditions on Phytoplankton Fatty Acids
Cited by: 196
Author(s): Aaron W. E. Galloway, Monika Winder
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0238173

Changes in reflectance of rice seedlings during planthopper feeding as detected by digital camera: Potential applications for high-throughput phenotyping
Cited by: 6
Author(s): Finbarr G. Horgan, Artzai Jauregui, Ainara Peñalver‐Cruz, Eduardo Crisol‐Martínez, Carmencita C. Bernal
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0254172

In-vivo impact of common cosmetic preservative systems in full formulation on the skin microbiome
Cited by: 7
Author(s): Barry Murphy, Michael Hoptroff, David H. Arnold, Richard Eccles, Stuart Campbell-Lee
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.8612

Seasonal variability and vertical distribution of autotrophic and heterotrophic picoplankton in the Central Red Sea
Cited by: 16
Author(s): Najwa Al-Otaibi, Tamara Megan Huete‐Stauffer, María Ll. Calleja, Xabier Irigoien, Xosé Anxelu G. Morán
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0109280

In Situ Mortality Experiments with Juvenile Sea Bass (Dicentrarchus labrax) in Relation to Impulsive Sound Levels Caused by Pile Driving of Windmill Foundations
Cited by: 15
Author(s): E. Debusschere, Bert De Coensel, Anna Bajek, Dick Botteldooren, Kristian Hostens, Jan Vanaverbeke, Sofie Vandendriessche, K. Van Ginderdeuren, Magda Vincx, S. Degraer
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0074077

Are Hotspots Always Hotspots? The Relationship between Diversity, Resource and Ecosystem Functions in the Arctic
Cited by: 39
Author(s): Heike Link, Dieter Piepenburg, Philippe Archambault
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0220130

Acidification-induced cellular changes in Symbiodinium isolated from Mussismilia braziliensis
Cited by: 4
Author(s): Lilian Jorge Hill, Wladimir Costa Paradas, Maria Julia Willemes, Miria G. Pereira, Paulo S. Salomon, Rodrigo Mariath, Rodrigo L. Moura, Geórgia C. Atella, Marcos Farina, Gilberto M. Amado‐Filho, Leonardo T. Salgado
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-021-97057-1

Porphyromonas spp., Fusobacterium spp., and Bacteroides spp. dominate microbiota in the course of macropod progressive periodontal disease
Cited by: 7
Author(s): Sabine Yip, Manijeh Mohammadi‐Dehcheshmeh, David J. McLelland, Wayne Boardman, Sugiyono Saputra, Esmaeil Ebrahimie, Laura S. Weyrich, P. S. Bird, Darren J. Trott
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0029359

Metabolomic Assessment of Induced and Activated Chemical Defence in the Invasive Red Alga Gracilaria vermiculophylla
Cited by: 92
Author(s): Göran M. Nylund, Florian Weinberger, Martin Rempt, Georg Pohnert
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0016357

Characteristics of the Mesophotic Megabenthic Assemblages of the Vercelli Seamount (North Tyrrhenian Sea)
Cited by: 123
Author(s): Marzia Bo, Marco Bertolino, Mireno Borghini, Michela Castellano, Anabella Covazzi Harriague, Cristina Gioia Di Camillo, G.P. Gasparini, Cristina Misic, Paolo Pedrini, Antonio Pusceddu, Katrin Schröeder, Giorgio Bavestrello
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0084739

Flood Impacts in Keppel Bay, Southern Great Barrier Reef in the Aftermath of Cyclonic Rainfall
Cited by: 50
Author(s): Alison Jones, Ray Berkelmans
Software Mentions: 1
Published: over 12 years ago

10.1007/s00442-021-04855-5

Using GPS tracking and stable multi-isotopes for estimating habitat use and winter range in Palearctic ospreys
Cited by: 5
Author(s): Flavio Monti, Aloïs Robert, Jean-Marie Dominici, Andrea Sforzi, Rafel Triay Bagur, Antoni Muñoz Navarro, Gaël Guillou, Olivier Duriez, Ilham Bentaleb
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0063693

Temporal Variations in Metabolic and Autotrophic Indices for Acropora digitifera and Acropora spicifera – Implications for Monitoring Projects
Cited by: 3
Author(s): Saskia Hinrichs, Nicole L. Patten, Anya M. Waite
Software Mentions: 1
Published: over 13 years ago

10.3390/ijms21061916

In Situ Profiling of the Three Dominant Phyla Within the Human Gut Using TaqMan PCR for Pre-Hospital Diagnosis of Gut Dysbiosis
Cited by: 4
Author(s): Young Chang Jo, Setu Bazie Tagele, Huy Quang Pham, Young Hun Jung, Jerald Conrad Ibal, Seung-Dae Choi, Gi-Ung Kang, Sowon Park, Yunkoo Kang, Seung Kim, Hong Koh, Jae‐Ho Shin
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0146053

Quantifying the Adaptive Cycle
Cited by: 23
Author(s): David G. Angeler, Craig R. Allen, Ahjond S. Garmestani, Lance Gunderson, Olle Hjerne, Monika Winder
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-021-97315-2

Tea plantations and their importance as host plants and hot spots for epiphytic cryptogams
Cited by: 1
Author(s): Grzegorz J. Wolski, Renata Piwowarczyk, Vítězslav Plášek, Martin Kukwa, Karolina Ruraż
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-96856-w

Secondary predation constrains DNA-based diet reconstruction in two threatened shark species
Cited by: 2
Author(s): Mark de Bruyn, Matteo Barbato, Joseph D. DiBattista, Matt K. Broadhurst
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0075873

Spatial and Temporal Patterns of Eastern Australia Subtropical Coral Communities
Cited by: 23
Author(s): Steven Dalton, George Roff
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-021-98068-8

Phenology of Oithona similis demonstrates that ecological flexibility may be a winning trait in the warming Arctic
Cited by: 11
Author(s): Kaja Balazy, Rafał Boehnke, Emilia Trudnowska, Janne E. Søreide, Katarzyna Błachowiak‐Samołyk
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0130116

The Link between Microbial Diversity and Nitrogen Cycling in Marine Sediments Is Modulated by Macrofaunal Bioturbation
Cited by: 48
Author(s): Maryam Yazdani Foshtomi, Ulrike Braeckman, Sofie Derycke, Melanie Sapp, D. Van Gansbeke, Koen Sabbe, Anne Willems, Magda Vincx, Jan Vanaverbeke
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-021-98284-2

Presence and biodistribution of perfluorooctanoic acid (PFOA) in Paracentrotus lividus highlight its potential application for environmental biomonitoring
Cited by: 6
Author(s): Dario Savoca, Raffaella Melfi, Antonio Palumbo Piccionello, Salvatore Barreca, Silvestre Buscemi, Vincenzo Arizza, Marco Arculeo, Andrea Pace
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0166679

The Farther the Better: Effects of Multiple Environmental Variables on Reef Fish Assemblages along a Distance Gradient from River Influences
Cited by: 19
Author(s): Leonardo Mitrano Neves, Tatiana P. Teixeira-Neves, Guilherme H. Pereira-Filho, Francisco Gerson Araújo
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.2536

Ontogenetic foraging activity and feeding selectivity of the Brazilian endemic parrotfishScarus zelindae
Cited by: 16
Author(s): Pedro Henrique Cipresso Pereira, M. V. F. dos Santos, Daniel Lino Lippi, Pedro Silva
Software Mentions: 1
Published: almost 10 years ago

10.7717/peerj.7463

Plant host and drought shape the root associated fungal microbiota in rice
Cited by: 26
Author(s): Beatriz Andreo-Jiménez, Philippe Vandenkoornhuyse, Amandine Lê Van, Arvid Heutinck, Marie Duhamel, Niteen N. Kadam, Krishna Jagadish, Carolien Ruyter-Spira, Harro J. Bouwmeester
Software Mentions: 1
Published: almost 7 years ago

10.7717/peerj.1832

Comparative analysis of different survey methods for monitoring fish assemblages in coastal habitats
Cited by: 30
Author(s): Duncan G.L. Baker, Tyler D. Eddy, Reba McIver, Allison L. Schmidt, Marie-Hélène Thériault, Monica Boudreau, Simon C. Courtenay, Heike K. Lotze
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0020370

Patterns of Coral Disease across the Hawaiian Archipelago: Relating Disease to Environment
Cited by: 74
Author(s): Greta S. Aeby, Gareth J. Williams, Erik C. Franklin, Jean C. Kenyon, Evelyn F. Cox, S. L. Coles, Thierry M. Work
Software Mentions: 1
Published: about 15 years ago

10.1002/jia2.25199

Repeated rectal application of a hyperosmolar lubricant is associated with microbiota shifts but does not affect Pr<scp>EP</scp> drug concentrations: results from a randomized trial in men who have sex with men
Cited by: 13
Author(s): Richard E. Haaland, Jeffrey J. Fountain, Yingtian Hu, Angela Holder, Chuong Dinh, LaShonda Hall, Nicole A. Pescatore, Sheila Heeke, Clyde E. Hart, Jiahui Xu, Yi‐Juan Hu, Colleen F. Kelley
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0080307

Till Death Do Us Part: Stable Sponge-Bacteria Associations under Thermal and Food Shortage Stresses
Cited by: 46
Author(s): Lucía Pita, Patrick M. Erwin, Xavier Turon, Susanna López‐Legentil
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0198305

Effects of water decontamination methods and bedding material on the gut microbiota
Cited by: 27
Author(s): Willie A Bidot, Aaron C. Ericsson, Craig L. Franklin
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0103416

Community Turnover of Wood-Inhabiting Fungi across Hierarchical Spatial Scales
Cited by: 23
Author(s): Nerea Abrego, Gonzalo García‐Baquero, Panu Halme, Otso Ovaskainen, Isabel Salcedo
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0094593

Documenting the Density of Subtidal Marine Debris across Multiple Marine and Coastal Habitats
Cited by: 37
Author(s): Stephen Smith, Robert J. Edgar
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-021-99052-y

Potential roles of 1,5-anhydro-d-fructose in modulating gut microbiome in mice
Cited by: 2
Author(s): Takashi Ito, Tadahide Totoki, Seiya Takada, Shotaro Otsuka, Ikuro Maruyama
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-99314-9

Ileal mucosa-associated microbiota overgrowth associated with pathogenesis of primary biliary cholangitis
Cited by: 7
Author(s): Shogo Kitahata, Yasunori Yamamoto, Osamu Yoshida, Yoshio Terada, Tomoe Kawamura, Shinya Furukawa, Teru Kumagi, Masashi Hirooka, Eiji Takeshita, Masanori Abe, Yoshiou Ikeda, Yoichi Hiasa
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0019402

Adaptive Traits Are Maintained on Steep Selective Gradients despite Gene Flow and Hybridization in the Intertidal Zone
Cited by: 84
Author(s): Gerardo I. Zardi, Katy R. Nicastro, Fernando Cánovas, Joana F. Costa, Ester A. Serrão, Gareth A. Pearson
Software Mentions: 1
Published: about 15 years ago

10.3390/ijms21062030

The Role of Biofilms Developed under Different Anthropogenic Pressure on Recruitment of Macro-Invertebrates
Cited by: 14
Author(s): Eva Cacabelos, Patrício Ramalhosa, João Canning‐Clode, Jesús S. Troncoso, Celia Olabarria, Cristina Delgado, Sergey Dobretsov, Ignácio Gestoso
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0044199

Pseudomonas aeruginosa Exhibits Frequent Recombination, but Only a Limited Association between Genotype and Ecological Setting
Cited by: 111
Author(s): Timothy J. Kidd, Stephen Ritchie, Kay A. Ramsay, Keith Grimwood, Scott C. Bell, Paul B. Rainey
Software Mentions: 1
Published: almost 14 years ago

10.1093/jme/tjw182

Evaluating the Adaptation Process of Sandfly Fauna to Anthropized Environments in a Leishmaniasis Transmission Area in the Brazilian Amazon
Cited by: 4
Author(s): Ingrid Nazaré Garcia Rosário, Andrey José de Andrade, Raphael Ligeiro, Ricardo Ishak, Ivoneide M. Silva
Software Mentions: 1
Published: over 9 years ago

10.1155/2013/906180

Epibenthic Assessment of a Renewable Tidal Energy Site
Cited by: 9
Author(s): Emma V. Sheehan, Sarah Gall, Sophie L. Cousens, Martin J. Attrill
Software Mentions: 1
Published: over 13 years ago

10.1155/2014/215418

Prescribed Burning and Clear-Cutting Effects on Understory Vegetation in aPinus canariensisStand (Gran Canaria)
Cited by: 5
Author(s): José Ramón Arévalo, S. Fernández-Lugo, Celia García-Domínguez, Agustín Naranjo‐Cigala, Federico Grillo, Leonor Calvo
Software Mentions: 1
Published: over 12 years ago

10.1155/2017/5930516

Effects of a Supraseasonal Drought on the Ecological Attributes ofPlagioscion squamosissimus(Heckel, 1840) (Pisces, Sciaenidae) in a Brazilian Reservoir
Cited by: 4
Author(s): Antonia Elissandra Freire de Souza, Jônnata Fernandes de Oliveira, Danielle Peretti, Rodrigo Fernandes, Rodrigo Silva da Costa, José Luís Costa Novaes
Software Mentions: 1
Published: over 9 years ago

10.3390/s17102309

The Modular Optical Underwater Survey System
Cited by: 9
Author(s): Ruhul Amin, Benjamin L. Richards, William F. X. E. Misa, Jeremy C. Taylor, Dennis B. Miller, Audrey Rollo, Christopher Demarke, Hanumant Singh, Grace C. Young, Jeremy L. Childress, Justin E. Ossolinski, Russell T Reardon, Kyle Koyanagi
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.10260

Tracking the dynamics of individual gut microbiome of sea cucumber Apostichopus japonicus during gut regeneration
Cited by: 5
Author(s): Yasushi Yamazaki, Yuichi Sakai, Juanwen Yu, Sayaka Mino, Tomoo Sawabe
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.67175

Environmental fluctuations reshape an unexpected diversity-disturbance relationship in a microbial community
Cited by: 20
Author(s): Christopher P. Mancuso, Hyunseok Lee, Clare I. Abreu, Jeff Gore, Ahmad S. Khalil
Software Mentions: 1
Published: almost 5 years ago

10.1007/s11325-020-02246-3

Relationships of sleep disturbance, intestinal microbiota, and postoperative pain in breast cancer patients: a prospective observational study
Cited by: 13
Author(s): Zhiwen Yao, Bing-Cheng Zhao, Xiao Yang, Shao-Hui Lei, Yumei Jiang, Ke-Xuan Liu
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0200411

Spatial variability in the diversity and structure of faunal assemblages associated with kelp holdfasts (Laminaria hyperborea) in the northeast Atlantic
Cited by: 24
Author(s): Harry Teagle, Pippa J. Moore, Helen L. Jenkins, Dan A. Smale
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0231820

The MacKinnon Lists Technique: An efficient new method for rapidly assessing biodiversity and species abundance ranks in the marine environment
Cited by: 2
Author(s): Lydia Luise Bach, David M. Bailey, Euan S. Harvey, Ross MacLeod
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.6879

A citizen science approach to evaluating US cities for biotic homogenization
Cited by: 11
Author(s): Misha Leong, Michelle Trautwein
Software Mentions: 1
Published: over 7 years ago

10.1186/s13287-020-01902-5

Adipose-derived mesenchymal stem cells attenuate acute lung injury and improve the gut microbiota in septic rats
Cited by: 22
Author(s): Junyi Sun, Xianfei Ding, Shaohua Liu, Xiaoguang Duan, Huoyan Liang, Tongwen Sun
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.67450

Glycan-based shaping of the microbiota during primate evolution
Cited by: 7
Author(s): Sumnima Singh, Patricia Bastos-Amador, Jessica A. Thompson, Mauro Truglio, Bahtiyar Yılmaz, Sílvia Cardoso, Daniel Sobral, Miguel P. Soares
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.5802

Influenced but not determined by historical events: genetic, demographic and morphological differentiation inHeleobia ascotanensisfrom the Chilean Altiplano
Cited by: 11
Author(s): Moisés A. Valladares, Marco A. Méndez, Gonzalo A. Collado
Software Mentions: 1
Published: over 7 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292