cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.1002/ece3.4555

Habitat effects on intra-species variation in functional morphology: Evidence from freshwater fish
Cited by: 23
Author(s): Fangmin Shuai, Shixiao Yu, Sovan Lek, Xinhui Li
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41390-020-1044-x

Developmental effects on sleep–wake patterns in infants receiving a cow’s milk-based infant formula with an added prebiotic blend: a Randomized Controlled Trial
Cited by: 6
Author(s): John Colombo, Susan E. Carlson, Cecilia Algarı́n, Sussanne Reyes, Maciej Chichlowski, Cheryl L. Harris, Jennifer L. Wampler, Patricio Peirano, Carol Lynn Berseth
Software Mentions: 1
Published: about 6 years ago

10.1002/ece3.4339

The effect of habitat fragmentation on the bee visitor assemblages of three Australian tropical rainforest tree species
Cited by: 17
Author(s): Tobias J. Smith, Margaret M. Mayfield
Software Mentions: 1
Published: about 8 years ago

10.1002/ece3.4683

Ecological and phylogenetic predictors of mobbing behavior in a tropical dry forest
Cited by: 2
Author(s): Hevana S. Lima, Flor Maria Guedes Las‐Casas, Jonathan Ramos Ribeiro, Thiago Gonçalves‐Souza, Luciano N. Naka
Software Mentions: 1
Published: over 7 years ago

10.1002/ece3.6777

Sweet tooth: Elephants detect fruit sugar levels based on scent alone
Cited by: 16
Author(s): Omer Nevo, Melissa H. Schmitt, Manfred Ayasse, Kim Valenta
Software Mentions: 1
Published: almost 6 years ago

10.3390/pathogens10050525

Mayaro Virus: The Potential Role of Microbiota and Wolbachia
Cited by: 3
Author(s): Thiago Nunes Pereira, Fabiano Duarte Carvalho, Jerônimo Nunes Rugani, Vanessa Lôbo de Carvalho, Jaqueline Jarusevicius, Jayme A. Souza-Neto, Luciano Andrade Moreira
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.5901

Insectivorous bats selectively source moths and eat mostly pest insects on dryland and irrigated cotton farms
Cited by: 35
Author(s): Heidi Kolkert, Rose L. Andrew, Rhiannon Smith, Romina Rader, Nicholas Reid
Software Mentions: 1
Published: over 6 years ago

10.1002/ece3.1122

Operator bias in software‐aided bat call identification
Cited by: 20
Author(s): Georg Fritsch, Alexander Bruckner
Software Mentions: 1
Published: about 12 years ago

10.1128/mSphere.00531-17

Reproductive System Symbiotic Bacteria Are Conserved between Two Distinct Populations of <i>Euprymna scolopes</i> from Oahu, Hawaii
Cited by: 11
Author(s): Allison H. Kerwin, Spencer V. Nyholm
Software Mentions: 1
Published: over 8 years ago

10.1002/ece3.4991

Small mammal herbivores mediate the effects of soil nitrogen and invertebrate herbivores on grassland diversity
Cited by: 10
Author(s): Nicole Poe, Katharine L. Stuble, Lara Souza
Software Mentions: 1
Published: over 7 years ago

10.1002/ece3.2624

Global ecological success of Thalassoma fishes in extreme coral reef habitats
Cited by: 13
Author(s): Christopher J. Fulton, Peter C. Wainwright, Andrew S. Hoey, David R. Bellwood
Software Mentions: 1
Published: over 9 years ago

10.1002/ece3.4300

River ecosystem resilience to extreme flood events
Cited by: 19
Author(s): Alexander M. Milner, Jessica L. Picken, Megan Klaar, Anne L. Robertson, Leonie R. Clitherow, Lawrence J. B. Eagle, Lee E. Brown
Software Mentions: 1
Published: about 8 years ago

10.1002/ece3.5517

Fine‐scale substrate heterogeneity in green roof plant communities: The constraint of size
Cited by: 7
Author(s): Amiel Vasl, Bracha Y. Schindler, Gyongyver J. Kadas, Leon Blaustein
Software Mentions: 1
Published: almost 7 years ago

10.1002/ece3.5699

Microbiome responses during virulence adaptation by a phloem‐feeding insect to resistant near‐isogenic rice lines
Cited by: 11
Author(s): Finbarr G. Horgan, T. Srinivasan, Eduardo Crisol‐Martínez, Maria Liberty P. Almazan, Angelee Fame Ramal, Ricardo Oliva, Ian Lorenzo Quibod, Carmencita C. Bernal
Software Mentions: 1
Published: almost 7 years ago

10.3390/pathogens10030266

Intracellular Microbiome Profiling of the Acanthamoeba Clinical Isolates from Lens Associated Keratitis
Cited by: 9
Author(s): Yu-Jen Wang, Sung Chou Li, Wei Chen Lin, Fu Chin Huang
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.2323

Positive and negative effects of mesograzers on early‐colonizing species in an intertidal rocky‐shore community
Cited by: 20
Author(s): Daniela Tejada-Martínez, Daniela N. López, César C. Bonta, Roger D. Sepúlveda, Nelson Valdivia
Software Mentions: 1
Published: about 10 years ago

10.1002/ece3.6861

Field‐based individual plant phenotyping of herbaceous species by unmanned aerial vehicle
Cited by: 9
Author(s): Wei Guo, Yuya Fukano, Koji Noshita, S. Ninomiya
Software Mentions: 1
Published: almost 6 years ago

10.1002/ece3.3654

Habitat formation prevails over predation in influencing fouling communities
Cited by: 30
Author(s): Jean‐Charles Leclerc, Frédérique Viard
Software Mentions: 1
Published: over 8 years ago

10.1002/ece3.3146

Arthropod communities on hybrid and parental cottonwoods are phylogenetically structured by tree type: Implications for conservation of biodiversity in plant hybrid zones
Cited by: 6
Author(s): Karl J. Jarvis, Gerard J. Allan, Ashley Craig, Rebecca K. Beresic‐Perrins, Gina M. Wimp, Catherine A. Gehring, Thomas G. Whitham
Software Mentions: 1
Published: about 9 years ago

10.1002/ece3.7407

The gut microbiome composition and degradation enzymes activity of black Amur bream (<i>Megalobrama terminalis</i>) in response to breeding migratory behavior
Cited by: 9
Author(s): Yaqiu Liu, Xinhui Li, Jie Li, Weitao Chen
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.679

Community patterns of the small riverine benthos within and between two contrasting glacier catchments
Cited by: 11
Author(s): Ursula Eisendle-Flöckner, Christian D. Jersabek, Martín Kirchmair, Kerstin Hashold, Walter Traunspurger
Software Mentions: 1
Published: about 13 years ago

10.1128/mSphere.00219-18

Rectal and Naris Swabs: Practical and Informative Samples for Analyzing the Microbiota of Critically Ill Patients
Cited by: 10
Author(s): Saumya Bansal, Julie T. Nguyen, Aleksandra Leligdowicz, Yu Zhang, Kevin C. Kain, Daniel R. Ricciuto, Bryan Coburn
Software Mentions: 1
Published: about 8 years ago

10.1002/ece3.5394

Niche differentiation in rainforest ant communities across three continents
Cited by: 14
Author(s): Michael E. Grevé, Mickal Houadria, Alan N. Andersen, Florian Menzel
Software Mentions: 1
Published: about 7 years ago

10.1002/ece3.5802

Combined effects of global climate change and nutrient enrichment on the physiology of three temperate maerl species
Cited by: 16
Author(s): Zujaila Nohemy Qui-Minet, Jérôme Coudret, Dominique Davoult, Jacques Grall, Miguel Méndez Sandín, Thierry Cariou, Sophie Martin
Software Mentions: 1
Published: over 6 years ago

10.1002/ece3.2117

A trait-based approach reveals the feeding selectivity of a small endangered Mediterranean fish
Cited by: 11
Author(s): Pablo Rodríguez‐Lozano, Iraima Verkaik, Alberto Maceda‐Veiga, Mario Muñoz Monroy, Adolfo de Sostoa, María Rieradevall, Narcı́s Prat
Software Mentions: 1
Published: over 10 years ago

10.3390/pathogens10060697

Sow Contact Is a Major Driver in the Development of the Nasal Microbiota of Piglets
Cited by: 10
Author(s): Pau Obregon-Gutierrez, Virginia Aragón, Florencia Correa‐Fiz
Software Mentions: 1
Published: about 5 years ago

10.1128/mSphere.00148-18

Broadscale Ecological Patterns Are Robust to Use of Exact Sequence Variants versus Operational Taxonomic Units
Cited by: 137
Author(s): Sydney I. Glassman, Jennifer B. H. Martiny
Software Mentions: 1
Published: almost 8 years ago

10.3390/pathogens9060428

Host Species Determines the Composition of the Prokaryotic Microbiota in Phlebotomus Sandflies
Cited by: 14
Author(s): Christos Papadopoulos, Panagiotis A. Karas, Sotirios Vasileiadis, Panagiota Ligda, Anastasios Saratsis, Smaragda Sotiraki, Dimitrios G. Karpouzas
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2019.01459

The Capacity of the Fecal Microbiota From Malawian Infants to Ferment Resistant Starch
Cited by: 9
Author(s): Yanan Wang, Elissa Mortimer, Kondwani Katundu, Noel Kalanga, Lex E. X. Leong, Geetha Gopalsamy, Claus T. Christophersen, Alyson Richard, Aravind Shivasami, Guy C. J. Abell, Graeme P. Young, Geraint B. Rogers
Software Mentions: 1
Published: about 7 years ago

10.1002/ece3.4474

Large-scale molecular diet analysis in a generalist marine mammal reveals male preference for prey of conservation concern
Cited by: 29
Author(s): Dietmar Schwarz, Sara M. Spitzer, Austen C. Thomas, Christa M. Kohnert, Theresa R. Keates, Alejandro Acevedo‐Gutiérrez
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2021.542064

Patterns of Sediment Fungal Community Dependent on Farming Practices in Aquaculture Ponds
Cited by: 8
Author(s): Zhimin Zhang, Qinghui Deng, Xiuyun Cao, Yiyong Zhou, Changchun Song
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.7715

Efficiency of biochar, nitrogen addition, and microbial agent amendments in remediation of soil properties and microbial community in Qilian Mountains mine soils
Cited by: 9
Author(s): Junqia Kong, Zhibin He, Longfei Chen, Rong Yang, Jun Du
Software Mentions: 1
Published: about 5 years ago

10.1002/ece3.5044

Disentangling drivers of the abundance of coral reef fishes in the Western Indian Ocean
Cited by: 24
Author(s): Melita Samoilys, Andrew R. Halford, Kennedy Osuka
Software Mentions: 1
Published: over 7 years ago

10.1002/ece3.3020

Stochastic losses of fire-dependent endemic herbs revealed by a 65-year chronosequence of dispersal-limited woody plant encroachment
Cited by: 6
Author(s): J. Stephen Brewer
Software Mentions: 1
Published: over 9 years ago

10.1002/ece3.1208

Abundance, diversity, and feeding behavior of coral reef butterflyfishes at Lord Howe Island
Cited by: 15
Author(s): Morgan S. Pratchett, Andrew S. Hoey, Christopher Cvitanovic, Jean‐Paul A. Hobbs, Christopher J. Fulton
Software Mentions: 1
Published: almost 12 years ago

10.3389/fmicb.2018.03334

Bacterial Communities in the Alpaca Gastrointestinal Tract Vary With Diet and Body Site
Cited by: 3
Author(s): Courtney Carroll, Kyle D. Olsen, Nathan J. Ricks, Kimberly A. Dill‐McFarland, Garret Suen, Todd Robinson, John M. Chaston
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.00956

Can the Bacterial Community of a High Arctic Glacier Surface Escape Viral Control?
Cited by: 23
Author(s): Sara Rassner, Alexandre M. Anesio, Susan Elizabeth Girdwood, Katherina Hell, Jarishma K. Gokul, David E. Whitworth, Arwyn Edwards
Software Mentions: 1
Published: about 10 years ago

10.1002/ece3.7075

Insect morphometry is reproducible under average investigation standards
Cited by: 6
Author(s): Sándor Csősz, Bernhard Seifert, István Mikó, Brendon E. Boudinot, Marek L. Borowiec, Brian L. Fisher, Matthew Prebus, Jayanthi Puniamoorthy, Jean-Claude Rakotonirina, Nicole Rasoamanana, R. Jack Schultz, Carolyn Trietsch, Jonah M. Ulmer, Zoltán Elek
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2016.01749

Microbial Communities of Conducting and Respiratory Zones of Lung-Transplanted Patients
Cited by: 8
Author(s): Marie Beaume, Vladimir Lazarević, Thilo Köhler, Nadia Gaïa, Oriol Manuel, John-David Aubert, Loic Bærlocher, Laurent Farinelli, Paola Gasche, Jacques Schrenzel, Christian van Delden, Rita Achermann, Patrizia Amico, Philippe Baumann, Guido Beldi, Christian Benden, Christoph Berger, Isabelle Binet, Pierre‐Yves Bochud, Elsa Boely, Heiner C. Bucher, Léo H. Bühler, Thierry Carell, Emmanuelle Catana, Yves Chalandon, Sabina De Geest, Olivier de Rougemont, Michael Dickenmann, Michel Duchosal, Thomas Fehr, Sylvie Ferrari‐Lacraz, Christian Garzoni, Paola Gasche Soccal, Emiliano Giostra, Déla Golshayan, Daniel W. Good, Karine Hadaya, Jörg Halter, Dominik Heim, Christoph Hess, Sven Hillinger, Hans H. Hirsch, Cédric Hirzel, Günther F.L. Hofbauer, Uyen Huynh‐Do, Franz F. Immer, Richard Klaghofer, Michael Koller, Bettina Laesser, Roger Lehmann, Christian Lovis, Hanspeter Marti, Pierre Yves Martin, Luca Martinolli, Pascal Meylan, Paul Mohaçsi, Isabelle Morard, Philippe Morel, Ulrike Mueller, Nicolas J. Mueller, Helen Mueller-McKenna, A Müller, Thomas Müller, Beat Müllhaupt, David Nadal, Manuel Pascual, Jakob Passweg, Chantal Piot Ziegler, Juliane Rick, Eddy Roosnek, Anne Rosselet, Silvia Rothlin, Frank Ruschitzka, Urs Schanz, Stefan Schaub, Christian Seiler, Susanne Stampf, Jürg Steiger, Guido Stirnimann, Guido Toso, Dimitri Tsinalis, Jean-Pierre Venetz, Jean Villard, Madeleine Wick, Markus J. Wilhelm, Patrick Yerly
Software Mentions: 1
Published: almost 10 years ago

10.3390/pathogens10081026

HPV DeepSeq: An Ultra-Fast Method of NGS Data Analysis and Visualization Using Automated Workflows and a Customized Papillomavirus Database in CLC Genomics Workbench
Cited by: 4
Author(s): Jane Shen-Gunther, Qingqing Xia, Hong Cai, Yufeng Wang
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.705020

Gut Microbiota Diversity and C-Reactive Protein Are Predictors of Disease Severity in COVID-19 Patients
Cited by: 48
Author(s): André Moreira-Rosário, Cláudia Marques, Hélder Pinheiro, João R. Araújo, Pedro Ribeiro, Rita Rocha, Inês Barreiros Mota, Diogo Pestana, Rogers Ribeiro, Ana Margarida Pereira, Maria José Sousa, José B. Pereira-Leal, José de Sousa, Juliana Morais, Diana Teixeira, Júlio César Rocha, Marta P. Silvestre, Nuno Príncipe, Nuno Gatta, J. A. Amado, Lurdes Santos, Fernando Maltêz, Ana Boquinhas, Germano de Sousa, Nuno Germano, Gonçalo Sarmento, Cristina Granja, Pedro Póvoa, Ana Faria, Conceição Calhau
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2017.01702

Composted Cattle Manure Increases Microbial Activity and Soil Fertility More Than Composted Swine Manure in a Submerged Rice Paddy
Cited by: 126
Author(s): Suvendu Das, Seung Tak Jeong, Suvendu Das
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2014.00616

Microbial interactions and the ecology and evolution of Hawaiian Drosophilidae
Cited by: 3
Author(s): Timothy K. O’Connor, Parris T. Humphrey, Richard T. Lapoint, Noah K. Whiteman, Patrick M. O’Grady
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2019.01381

Microbiota Analysis for the Optimization of Campylobacter Isolation From Chicken Carcasses Using Selective Media
Cited by: 12
Author(s): Jinshil Kim, Hakdong Shin, Hyeeun Park, Hayan Jung, Junhyung Kim, Seongbeom Cho, Sangryeol Ryu, Byeonghwa Jeon
Software Mentions: 1
Published: about 7 years ago

10.1002/ece3.585

A tool for protected area management: multivariate control charts ‘cope’ with rare variable communities
Cited by: 6
Author(s): Thomas B. Stringell, Roger N. Bamber, Mark Burton, Charles Lindenbaum, Lucie R. Skates, William Sanderson
Software Mentions: 1
Published: over 13 years ago

10.3390/nu12072127

Circulating Short-Chain Fatty Acids Are Positively Associated with Adiposity Measures in Chinese Adults
Cited by: 17
Author(s): Yiqing Wang, Huijun Wang, Annie Green Howard, Katie A. Meyer, Matthew C. B. Tsilimigras, Christy L. Avery, Sha Wang, Shan Sun, Jiguo Zhang, Chang Su, Bing Zhang, Anthony A. Fodor
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0210231

Spatio-temporal variation of skeletal Mg-calcite in Antarctic marine calcifiers
Cited by: 9
Author(s): Blanca Figuerola, Damian B. Gore, Glenn Johnstone, Jonathan S. Stark
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.591358

Soil Bacterial and Archaeal Communities and Their Potential to Perform N-Cycling Processes in Soils of Boreal Forests Growing on Well-Drained Peat
Cited by: 13
Author(s): Marika Truu, Hiie Nõlvak, Ivika Ostonen, Kristjan Oopkaup, Martin Maddison, Teele Ligi, Mikk Espenberg, Veiko Uri, Ülo Mander, Jaak Truu
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0134530

Human Stressors Are Driving Coastal Benthic Long-Lived Sessile Fan Mussel Pinna nobilis Population Structure More than Environmental Stressors
Cited by: 28
Author(s): Salud Deudero, Maite Vázquez‐Luis, Elvira Álvarez
Software Mentions: 1
Published: about 11 years ago

10.3389/fmicb.2019.02851

Effect of Different Substrates on Soil Microbial Community Structure and the Mechanisms of Reductive Soil Disinfestation
Cited by: 22
Author(s): Xian-Zheng Tan, Hongkai Liao, Liangzuo Shu, Huaiying Yao
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0041829

Pollutant Dehalogenation Capability May Depend on the Trophic Evolutionary History of the Organism: PBDEs in Freshwater Food Webs
Cited by: 28
Author(s): Mireia Bartrons, Joan O. Grimalt, Guillermo de Mendoza, Jordi Catalan
Software Mentions: 1
Published: about 14 years ago

10.1128/mSphere.00358-19

Rectal Swabs from Critically Ill Patients Provide Discordant Representations of the Gut Microbiome Compared to Stool Samples
Cited by: 25
Author(s): Katherine Fair, D.G. Dunlap, Adam Fitch, Tatiana Bogdanovich, Barbara A. Methé, Alison Morris, Bryan J. McVerry, Georgios D. Kitsios
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2021.730477

Assessing the Influence of Environmental Sources on the Gut Mycobiome of Tibetan Macaques
Cited by: 3
Author(s): Binghua Sun, Yingna Xia, Samuel Davison, Andrés Gómez, Paul A. Garber, Katherine R. Amato, Xiaojuan Xu, Dong Xia, Xi Wang, Jin Hua Li
Software Mentions: 1
Published: about 5 years ago

10.3390/nu10070890

A Vegetarian Diet Is a Major Determinant of Gut Microbiota Composition in Early Pregnancy
Cited by: 70
Author(s): Helen L. Barrett, Luisa F. Gomez-Arango, Shelley A. Wilkinson, H. David McIntyre, Leonie K. Callaway, Mark Morrison, Marloes Dekker Nitert
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2018.01848

Isolation, Diversity, and Growth-Promoting Activities of Endophytic Bacteria From Tea Cultivars of Zijuan and Yunkang-10
Cited by: 56
Author(s): Xiaomei Yan, Zhi Wang, Mei Yu, Liqun Wang, Xu Wang, Qingshan Xu, Su Peng, Yu Zhou, Chaoling Wei
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2019.01886

Legitimate and Reliable Determination of the Age-Related Intestinal Microbiome in Young Piglets; Rectal Swabs and Fecal Samples Provide Comparable Insights
Cited by: 15
Author(s): R. Choudhury, Anouschka Middelkoop, J.E. Bolhuis, Michiel Kleerebezem
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0176922

Tectus (Trochus) niloticus search for suitable habitats can cause equivocal benefits of protection in village-based marine reserves
Cited by: 4
Author(s): Pascal Dumas, J. Ham, Rocky Kaku, Andrew William, Jeremie Kaltavara, Sompert Gereva, Marc Léopold
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2019.01083

The Variation of Nasal Microbiota Caused by Low Levels of Gaseous Ammonia Exposure in Growing Pigs
Cited by: 17
Author(s): Tongxin Wang, Qiongyu He, Weilei Yao, Yafei Shao, Li Ji, Feiruo Huang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0117675

Larval Settlement: The Role of Surface Topography for Sessile Coral Reef Invertebrates
Cited by: 99
Author(s): Steve W Whalan, Muhammad Abdul Wahab, Susanne Sprungala, Andrew J. Poole, Rocky de Nys
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2020.00693

Recto-Anal Junction (RAJ) and Fecal Microbiomes of Cattle Experimentally Challenged With Escherichia coli O157:H7
Cited by: 6
Author(s): Raies A. Mir, Robert G. Schaut, Torey Looft, Heather K. Allen, Vijay Kumar Sharma, Indira T. Kudva
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0177633

Urinary catheter-associated microbiota change in accordance with treatment and infection status
Cited by: 35
Author(s): Laetitia Bossa, Kimberly Kline, Diane McDougald, Bonsan Bonne Lee, Scott A. Rice
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2020.00312

Dietary Inulin and Trichuris suis Infection Promote Beneficial Bacteria Throughout the Porcine Gut
Cited by: 17
Author(s): Sophie Stolzenbach, Laura J. Myhill, Lee O’Brien Andersen, Łukasz Krych, Helena Mejer, Andrew R. Williams, Peter Nejsum, Christen Rune Stensvold, Dennis Sandris Nielsen, Stig Milan Thamsborg
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.629802

Metaproteomics Reveals Similar Vertical Distribution of Microbial Transport Proteins in Particulate Organic Matter Throughout the Water Column in the Northwest Pacific Ocean
Cited by: 1
Author(s): Ling-Fen Kong, Kunlun Yan, Zhang-Xian Xie, Yuexin He, Lin Lin, Hongkai Xu, Siqi Liu, Dazhi Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.02146

A Comparative Analysis of Microbial DNA Preparation Methods for Use With Massive and Branching Coral Growth Forms
Cited by: 14
Author(s): Alejandra Hernández‐Agreda, William Leggat, Tracy D. Ainsworth
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0211310

One-time nitrogen fertilization shifts switchgrass soil microbiomes within a context of larger spatial and temporal variation
Cited by: 6
Author(s): Huaihai Chen, Zamin K. Yang, Dan Yip, Reese H. Morris, Steven J. Lebreux, Melissa Cregger, Dawn M. Klingeman, Dafeng Hui, Robert L. Hettich, Steven W. Wilhelm, Gangsheng Wang, Frank E. Löffler, Christopher W. Schadt
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2018.02343

Leaves of Indoor Ornamentals Are Biodiversity and Functional Hotspots for Fungi
Cited by: 9
Author(s): Alexander Mahnert, Rocel Amor Ortega, Christian Berg, Martín Grube, Gabriele Berg
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2020.00268

Microbiome in Cladonia squamosa Is Vertically Stratified According to Microclimatic Conditions
Cited by: 20
Author(s): Hyun-Ju Noh, Yung Mi Lee, Chae Haeng Park, Hong Kum Lee, Jang-Cheon Cho, Soon Gyu Hong
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.664257

Prenatal Depression, Breastfeeding, and Infant Gut Microbiota
Cited by: 10
Author(s): Nicole Rodriguez, Hein Min Tun, Catherine J. Field, Piushkumar J. Mandhane, James A. Scott, Anita L. Kozyrskyj
Software Mentions: 1
Published: about 5 years ago

10.1186/s13071-020-04218-8

Laboratory colonization by Dirofilaria immitis alters the microbiome of female Aedes aegypti mosquitoes
Cited by: 1
Author(s): Abdulsalam Adegoke, Erik Neff, Amie Geary, Montana Ciara Husser, Kevin Wilson, Shawn Michael Norris, Guha Dharmarajan, Shahid Karim
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2015.01022

Temporal stability of bacterial symbionts in a temperate ascidian
Cited by: 20
Author(s): Susanna López‐Legentil, Xavier Turon, Roger Espluga, Patrick M. Erwin
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2017.01531

High Spatial and Temporal Variations of Microbial Community along the Southern Catfish Gastrointestinal Tract: Insights into Dynamic Food Digestion
Cited by: 24
Author(s): Zhimin Zhang, Dapeng Li, Mohamed M. Refaey, Weigang Xu
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0097396

Methods for the Induction of Reproduction in a Tropical Species of Filamentous Ulva
Cited by: 31
Author(s): Christina Carl, Rocky de Nys, Rebecca Lawton, Nicholas A. Paul
Software Mentions: 1
Published: over 12 years ago

10.1128/mSphere.00763-19

Systematic Analysis of Impact of Sampling Regions and Storage Methods on Fecal Gut Microbiome and Metabolome Profiles
Cited by: 33
Author(s): Yongsheng Liang, Tianyu Dong, Minjian Chen, Lianping He, Tingzhang Wang, Xingyin Liu, Hang Chang, Jian‐Hua Mao, Bo Hang, Antoine M. Snijders, Yankai Xia
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0080168

The Footprint of Continental-Scale Ocean Currents on the Biogeography of Seaweeds
Cited by: 36
Author(s): Thomas Wernberg, Mads S. Thomsen, Sean D. Connell, Bayden D. Russell, Jonathan M. Waters, Giuseppe C. Zuccarello, Gerald T. Kraft, Craig J. Sanderson, John A. West, Carlos Frederico D. Gurgel
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0066240

Productivity, Disturbance and Ecosystem Size Have No Influence on Food Chain Length in Seasonally Connected Rivers
Cited by: 44
Author(s): Danielle M. Warfe, Timothy D. Jardine, Neil E. Pettit, Stephen K. Hamilton, Bradley James Pusey, Stuart E. Bunn, Peter M. Davies, Michael M. Douglas
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0134416

Identification of Candidate Coral Pathogens on White Band Disease-Infected Staghorn Coral
Cited by: 56
Author(s): Sarah Gignoux‐Wolfsohn, Steven V. Vollmer
Software Mentions: 1
Published: about 11 years ago

10.3389/fmicb.2016.00321

Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
Cited by: 43
Author(s): Judith Lucas, Irina Koester, Antje Wichels, Jutta Niggemann, Thorsten Dittmar, Ulrich Callies, Karen Helen Wiltshire, Gunnar Gerdts
Software Mentions: 1
Published: over 10 years ago

10.3390/nu13062107

Habitual Dietary Intake Affects the Altered Pattern of Gut Microbiome by Acarbose in Patients with Type 2 Diabetes
Cited by: 13
Author(s): Fumie Takewaki, Harushi Nakajima, Daiki Takewaki, Yoshitaka Hashimoto, Susumu Majima, Hiroshi Okada, Takafumi Senmaru, Emi Ushigome, Masahide Hamaguchi, Masahiro Yamazaki, Yoshiki Tanaka, Shunji Nakajima, Hiroshi Ohno, Michiaki Fukui
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0065299

Influence of Interspecific Competition and Landscape Structure on Spatial Homogenization of Avian Assemblages
Cited by: 39
Author(s): Oliver Robertson, Clive McAlpine, Alan House, Martine Maron
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2019.00458

The Effects of Unfermented and Fermented Cow and Sheep Milk on the Gut Microbiota
Cited by: 14
Author(s): Elizabeth A. Rettedal, Eric Altermann, Nicole C. Roy, Julie E. Dalziel
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0065089

Pool-Type Fishways: Two Different Morpho-Ecological Cyprinid Species Facing Plunging and Streaming Flows
Cited by: 49
Author(s): Paulo Branco, José Maria Santos, C Katopodis, António N. Pinheiro, Maria Teresa Ferreira
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0126253

The Yellow Gorgonian Eunicella cavolini: Demography and Disturbance Levels across the Mediterranean Sea
Cited by: 39
Author(s): Maria Sini, Silvija Kipson, Cristina Linares, Drosos Koutsoubas, Joaquim Garrabou
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2019.02689

Vasoactive Intestinal Peptide Deficiency Is Associated With Altered Gut Microbiota Communities in Male and Female C57BL/6 Mice
Cited by: 15
Author(s): Manpreet Bains, Caleb Laney, Annie E. Wolfe, Megan Orr, James A. Waschek, Aaron C. Ericsson, Glenn Dorsam
Software Mentions: 1
Published: over 6 years ago

10.1128/mSphere.00791-19

Bifidobacterium longum R0175 Protects Rats against <scp>d</scp> -Galactosamine-Induced Acute Liver Failure
Cited by: 22
Author(s): Kaicen Wang, Longxian Lv, Yan Ren, Qiangqiang Wang, Huiyong Jiang, Wenshuai Wu, Yating Li, Jianzhong Ye, Jingjing Wu, Liya Yang, Xiaoyuan Bian, Xianwan Jiang, Yao Lu, Jiao-Jiao Xie, Jian Shen
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0131625

Daily Temperature Fluctuations Alter Interactions between Closely Related Species of Marine Nematodes
Cited by: 18
Author(s): Nele De Meester, Giovanni dos Santos, Annelien Rigaux, Yirina Valdes, Sofie Derycke, Tom Moens
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0141063

Entrapped Sediments as a Source of Phosphorus in Epilithic Cyanobacterial Proliferations in Low Nutrient Rivers
Cited by: 57
Author(s): Susanna A. Wood, Craig V. Depree, L. L. Brown, Tara McAllister, Ian Hawes
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0219714

Amplicon-based microbiome study highlights the loss of diversity and the establishment of a set of species in patients with dentin caries
Cited by: 21
Author(s): Diana Wolff, Cornelia Frese, Kyrill Schoilew, Alexander H. Dalpke, Björn Wolff, Sébastien Boutin
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0177216

Consistent multi-level trophic effects of marine reserve protection across northern New Zealand
Cited by: 26
Author(s): Graham J. Edgar, Rick D. Stuart‐Smith, Russell Thomson, Debbie Freeman
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0183809

From mammals back to birds: Host-switch of the acanthocephalan Corynosoma australe from pinnipeds to the Magellanic penguin Spheniscus magellanicus
Cited by: 23
Author(s): Jesús S. Hernández‐Orts, Martha Lima Brandão, Simona Georgieva, Juan Antonio Raga, Enrique A. Crespo, José L. Luque, Francisco Javier Aznar
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2021.712212

Administration of All-Trans Retinoic Acid to Pregnant Sows Alters Gut Bacterial Community of Neonatal Piglets With Different Hoxa1 Genotypes
Cited by: 1
Author(s): Haimei Zhou, Huadong Wu, Yixin Chen, Wanjie Zou, Wei Lü, Yan He
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.01192

Community Structure of Bacteria Associated With Drifting Sargassum horneri, the Causative Species of Golden Tide in the Yellow Sea
Cited by: 19
Author(s): Xiangyuan Mei, Chunhui Wu, Jianmin Zhao, Yun Tian, Peng Jiang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0231187

Increase in abundance and decrease in richness of soil microbes following Hurricane Otto in three primary forest types in the Northern Zone of Costa Rica
Cited by: 7
Author(s): William D. Eaton, Katie M. McGee, Kiley Alderfer, Angie Ramirez Jimenez, Mehrdad Hajibabaei
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2018.00833

Coral Bacterial-Core Abundance and Network Complexity as Proxies for Anthropogenic Pollution
Cited by: 46
Author(s): D. L. Leite, Joana Falcão Salles, Emiliano Nicolas Calderón, Clovis B. Castro, Adalto Bianchini, Joseane Aparecida Marques, Jan Dirk van Elsas, Raquel S. Peixoto
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.01697

Schizasterid Heart Urchins Host Microorganisms in a Digestive Symbiosis of Mesozoic Origin
Cited by: 4
Author(s): Alexander Ziegler, Ariel M Gilligan, Jesse G. Dillon, Bruno Pernet
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0071396

Large-Scale Spatial Distribution Patterns of Gastropod Assemblages in Rocky Shores
Cited by: 23
Author(s): Patricia Miloslavich, Juan J. Cruz‐Motta, Eduardo Salas, Katrin Iken, Vanessa P. Weinberger, Brenda Konar, Thomas J. Trott, Gerhard Pohle, Gregório Bigatti, Lisandro Benedetti‐Cecchi, Yoshihisa Shirayama, Angela Mead, Gabriela Palomo, Mayreli Ortiz, Judith Gobin, Adriana E. Sardi, Juan Manuel Díaz, Ann L. Knowlton, Melisa C. Wong, Ana Carolina Peralta
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0212626

Composition of gut microbiota in patients with toxigenic Clostridioides (Clostridium) difficile: Comparison between subgroups according to clinical criteria and toxin gene load
Cited by: 35
Author(s): Seunghoon Han, Joowon Yi, Jihoon Kim, Sang‐Won Lee, Hee‐Won Moon
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0183707

Taxonomic and functional surrogates of sessile benthic diversity in Mediterranean marine caves
Cited by: 27
Author(s): Vasilis Gerovasileiou, Charalampos Dimitriadis, Christos Arvanitidis, Eleni Voultsiadou
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2020.592539

Comparative Analysis of the Gut Microbial Communities of the Eurasian Kestrel (Falco tinnunculus) at Different Developmental Stages
Cited by: 12
Author(s): Lei Zhou, Xiaona Huo, Boyu Liu, Hui Wu, Feng Jiang
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0199022

Contrasting seasonal responses in dinitrogen fixation between shallow and deep-water colonies of the model coral Stylophora pistillata in the northern Red Sea
Cited by: 15
Author(s): Vanessa N. Bednarz, Malik S. Naumann, Ulisse Cardini, Nanne van Hoytema, Laura Rix, Mamoon M. D. Al-Rshaidat, Christian Wild
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2020.599438

Propionate Production by Bioelectrochemically-Assisted Lactate Fermentation and Simultaneous CO2 Recycling
Cited by: 8
Author(s): Marco Isipato, Paolo Dessì, Carlos Sánchez, Simon Mills, Umer Zeeshan Ijaz, Fabiano Asunis, Daniela Spiga, Giorgia De Gioannis, Michele Mascia, Gavin Collins, Aldo Muntoni, Piet N.L. Lens
Software Mentions: 1
Published: over 5 years ago

Projects: cran: PERMANOVA

Science Score: 85/100

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Papers Mentioning PERMANOVA 6,292