cran: PERMANOVA | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0123943

Passive Acoustic Monitoring of the Temporal Variability of Odontocete Tonal Sounds from a Long-Term Marine Observatory
Cited by: 18
Author(s): Tzu‐Hao Lin, Hon‐Tsen Yu, Chi‐Fang Chen, Lien‐Siang Chou
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-017-02516-3

Comparison of DNA-, PMA-, and RNA-based 16S rRNA Illumina sequencing for detection of live bacteria in water
Cited by: 94
Author(s): Ru Li, Hein Min Tun, Musarrat Jahan, Zhengxiao Zhang, Ayush Kumar, W. G. Dilantha Fernando, Annemieke Farenhorst, Ehsan Khafipour
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-06013-5

Assessment of different techniques for 3D superimposition of serial digital maxillary dental casts on palatal structures
Cited by: 63
Author(s): Georgios Vasilakos, Roman Schilling, Demetrios J. Halazonetis, Nikolaos Gkantidis
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-06394-7

Threats to large brown algal forests in temperate seas: the overlooked role of native herbivorous fish
Cited by: 46
Author(s): Fabrizio Gianni, Fabrizio Bartolini, Alexis Pey, Mathieu Laurent, Gustavo M. Martins, Laura Airoldi, Luisa Mangialajo
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-62178-6

Foraging behaviour of the South American sea lion (Otaria byronia) in two disparate ecosystems assessed through blubber fatty acid analysis
Cited by: 3
Author(s): Alicia Guerrero, Guido Pavez, Macarena Santos‐Carvallo, Tracey L. Rogers, Maritza Sepúlveda
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0126854

Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa
Cited by: 37
Author(s): Julián Martín Corbelli, Gustavo A. Zurita, Julieta Filloy, Juan Pablo Galvis, Natalia I. Vespa, Isabel Bellocq
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-62655-y

Lactobacillus acidophilus and L. plantarum improve health status, modulate gut microbiota and innate immune response of marron (Cherax cainii)
Cited by: 61
Author(s): Javed Foysal, Ravi Fotedar, Muhammad A.B. Siddik, Chin Yen Tay
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-62881-4

Oral therapy with colonization factor antigen I prevents development of type 1 diabetes in Non-obese Diabetic mice
Cited by: 7
Author(s): Andrew S. Nelson, Massimo Maddaloni, J. Richard Abbott, Carol Hoffman, Ali Akgül, Christina Ohland, Raad Z. Gharaibeh, Christian Jobin, Todd M. Brusko, David W. Pascual
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0075079

Strong Stability and Host Specific Bacterial Community in Faeces of Ponies
Cited by: 49
Author(s): Tina Blackmore, Alex Dugdale, Caroline McG. Argo, G. C. Curtis, Eric Pinloche, Pat Harris, Hilary J. Worgan, Susan Elizabeth Girdwood, Kirsty Dougal, C. J. Newbold, Neil McEwan
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0174787

Size, age, and habitat determine effectiveness of Palau's Marine Protected Areas
Cited by: 33
Author(s): Alan M. Friedlander, Yimnang Golbuu, Enric Ballesteros, Jennifer E. Caselle, Marine Gouezo, Dawnette Olsudong, Enric Sala
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-62944-6

A First Comprehensive Baseline of Hydrocarbon Pollution in Gulf of Mexico Fishes
Cited by: 37
Author(s): Erin L. Pulster, Adolfo Gracía, Maickel Armenteros, Gerardo Toro-Farmer, Susan M. Snyder, Brigid Carr, Madison R. Schwaab, Tiffany J. Nicholson, Justin Mrowicki, Steven A. Murawski
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0078910

Coastal Habitats as Surrogates for Taxonomic, Functional and Trophic Structures of Benthic Faunal Communities
Cited by: 31
Author(s): Anna Törnroos, Marie C. Nordström, Erik Bonsdorff
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-020-63783-1

Steel slag amendment impacts on soil microbial communities and activities of rice (Oryza sativa L.)
Cited by: 27
Author(s): Suvendu Das, Hyo Suk Gwon, Muhammad Israr Khan, Seung Tak Jeong
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-62215-4

Nitrogen enrichment increases greenhouse gas emissions from emerged intertidal sandflats
Cited by: 2
Author(s): Dallas J. Hamilton, R.H. Bulmer, Luitgard Schwendenmann, Carolyn J. Lundquist
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-63679-0

Warming and temperature variability determine the performance of two invertebrate predators
Cited by: 19
Author(s): Sonia C. Morón Lugo, Moritz Baumeister, Ola Mohamed Nour, Fabian Wolf, Meike Stumpp, Christian Pansch
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-63891-y

Different “metabolomic niches” of the highly diverse tree species of the French Guiana rainforests
Cited by: 16
Author(s): Albert Gargallo‐Garriga, Jordi Sardans, Víctor Granda, Joan Llusià, Guille Peguero, Dolores Asensio, Romá Ogaya, Ifigenia Urbina, Leandro Van Langenhove, Lore T. Verryckt, Jérôme Chave, Elodie A. Courtois, Clément Stahl, Oriol Grau, Karel Klem, Otmar Urban, Ivan A. Janssens, Josep Peñuelas
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-64383-9

The effect of threshold level on bone segmentation of cranial base structures from CT and CBCT images
Cited by: 24
Author(s): Luca Friedli, Dimitrios Kloukos, Georgios Kanavakis, Demetrios J. Halazonetis, Nikolaos Gkantidis
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0139802

Linking Intertidal and Subtidal Food Webs: Consumer-Mediated Transport of Intertidal Benthic Microalgal Carbon
Cited by: 31
Author(s): Chang‐Keun Kang, Hyun Je Park, Eun Jung Choy, Kwang-Sik Choi, Kangseok Hwang, Jongbin Kim
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-020-63775-1

MetaGeneHunt for protein domain annotation in short-read metagenomes
Cited by: 2
Author(s): Renaud Berlemont, Nathan J. Winans, D. Talamantes, Hoang Tran Dang, Houng-Wei Tsai
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0125475

Purple Pitcher Plant (Sarracenia rosea) Dieback and Partial Community Disassembly following Experimental Storm Surge in a Coastal Pitcher Plant Bog
Cited by: 8
Author(s): Matthew J. Abbott, Loretta L. Battaglia
Software Mentions: 1
Published: over 9 years ago

10.1101/2020.11.19.20234229

Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment
Cited by: 12
Author(s): Clarisse Marotz, Pedro Belda-Ferre, Farhana Ali, Promi Das, Shi Huang, Kalen Cantrel, Lingjing Jiang, Cameron Martino, Rachel E. Diner, Gibraan Rahman, Daniel McDonald, George E. Armstrong, Sho M. Kodera, S. De Donato, Gertrude Ecklu-Mensah, Neil Gottel, Mariana Salas Garcia, Leslie Chiang, Rodolfo A. Salido, Justin P. Shaffer, MacKenzie Bryant, Karenina Sanders, Greg Humphrey, Gail Ackermann, Niina Haiminen, Kristen L. Beck, Ho-Cheol Kim, Anna Paola Carrieri, Laxmi Parida, Yoshiki Vázquez-Baeza, Francesca J. Torriani, Rob Knight, Jack A. Gilbert, Daniel A. Sweeney, Sarah Allard
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-64857-w

Long-term effects of straw return and straw-derived biochar amendment on bacterial communities in soil aggregates
Cited by: 32
Author(s): Naling Bai, Hanlin Zhang, Sheng Zhou, Huifeng Sun, Yanfang Zhao, Xianqing Zheng, Shuangxi Li, Juanqin Zhang, Wenzhen Lv
Software Mentions: 1
Published: over 4 years ago

10.1016/j.humic.2019.100069

Gut microbiome composition and diversity are related to human personality traits
Cited by: 104
Author(s): Katerina V.‐A. Johnson
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-64797-5

Synergistic depletion of gut microbial consortia, but not individual antibiotics, reduces amyloidosis in APPPS1-21 Alzheimer’s transgenic mice
Cited by: 47
Author(s): Hemraj B. Dodiya, Mary Frith, Ashley M. Sidebottom, Yajun Cao, Jason C. Koval, Eugene B. Chang, Sangram S. Sisodia
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0172366

Regime shifts in coastal lagoons: Evidence from free-living marine nematodes
Cited by: 21
Author(s): Sérgio A. Netto, Gustavo Fonseca
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-020-65277-6

Novel cultivated endophytic Verrucomicrobia reveal deep-rooting traits of bacteria to associate with plants
Cited by: 28
Author(s): Wiebke Bünger, Xun Jiang, Jana Müller, Thomas Hurek, Barbara Reinhold‐Hurek
Software Mentions: 1
Published: over 4 years ago

10.1038/ismej.2016.109

Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time
Cited by: 108
Author(s): Nina Dombrowski, Klaus Schlaeppi, Matthew T. Agler, Stéphane Hacquard, Eric Kemen, Ruben Garrido‐Oter, Jörg Wunder, George Coupland, Paul Schulze‐Lefert
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0193727

Timing of embryonic quiescence determines viability of embryos from the calanoid copepod, Acartia tonsa (Dana)
Cited by: 11
Author(s): Birgitte Nilsson, Benni Winding Hansen
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-64961-x

Autologous fecal transplantation from a lean state potentiates caloric restriction effects on body weight and adiposity in obese mice
Cited by: 23
Author(s): Patricia Pérez-Matute, María Íñiguez, María de Toro, Emma Recio-Fernández, José A. Oteo
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-66364-4

Rapeseed-based diet modulates the imputed functions of gut microbiome in growing-finishing pigs
Cited by: 11
Author(s): Özgün Candan Onarman Umu, Liv Torunn Mydland, Margareth Øverland, Charles McL. Press, Henning Sørum
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0221091

Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador
Cited by: 12
Author(s): Ingeborg Haug, Sabrina Setaro, Juan Pablo Suárez
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-66658-7

A longitudinal study of the development of the saliva microbiome in infants 2 days to 5 years compared to the microbiome in adolescents
Cited by: 34
Author(s): Pernilla Lif Holgerson, Anders Esberg, Andreas Sjödin, Christina West, Ingegerd Johansson
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-66654-x

Taxonomic diversity of sputum microbiome in lung cancer patients and its relationship with chromosomal aberrations in blood lymphocytes
Cited by: 14
Author(s): В. Г. Дружинин, Liudmila Matskova, П. С. Деменков, Е. Д. Баранова, Valentin P. Volobaev, В. И. Минина, Svetlana V. Apalko, М. А. Чурина, Sofya A. Romanyuk, С. Г. Щербак, В А Иванов, А. В. Ларионов
Software Mentions: 1
Published: over 4 years ago

10.1038/s41396-020-00822-9

Plant resistome profiling in evolutionary old bog vegetation provides new clues to understand emergence of multi-resistance
Cited by: 29
Author(s): Melanie M. Obermeier, Wisnu Adi Wicaksono, Julian Taffner, Alessandro Bergna, Anja Poehlein, Tomislav Cernava, Stefanie Lindstaedt, Mario Lovrić, Christina A. Müller Bogotá, Gabriele Berg
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-66655-w

Chemical signal is in the blend: bases of plant-pollinator encounter in a highly specialized interaction
Cited by: 28
Author(s): Magali Proffit, Benoît Lapeyre, Bruno Buatois, Xiaoxia Deng, Pierre Arnal, Flora Gouzerh, Davíd Carrasco, Martine Hossaert‐McKey
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0118838

Differential Response of Fish Assemblages to Coral Reef-Based Seaweed Farming
Cited by: 16
Author(s): Edward J. Hehre, Jessica J. Meeuwig
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-67858-x

Ontogenetic trophic segregation between two threatened smooth-hound sharks in the Central Mediterranean Sea
Cited by: 12
Author(s): Manfredi Di Lorenzo, Salvatrice Vizzini, Geraldina Signa, Cristina Andolina, Gabriele Boscolo Palo, Michele Gristina, Carlotta Mazzoldi, Francesco Colloca
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0118985

Nutritional Evaluation of Australian Microalgae as Potential Human Health Supplements
Cited by: 200
Author(s): Megan Kent, Heather M. Welladsen, Arnold Mangott, Yan Li
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-020-68100-4

Dynamics of the lung microbiome in intensive care patients with chronic obstructive pulmonary disease and community-acquired pneumonia
Cited by: 9
Author(s): Wei-Chang Huang, Ming‐Feng Wu, Chen-Cheng Huang, Sin-Yin Liu, Hui-Chen Chen, Yih-Yuan Chen, Jeng-Yuan Hsu, Chieh-Chen Huang
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0071200

Setback Distances as a Conservation Tool in Wildlife-Human Interactions: Testing Their Efficacy for Birds Affected by Vehicles on Open-Coast Sandy Beaches
Cited by: 44
Author(s): Thomas A. Schlacher, Michael A. Weston, David Lynn, Rod M. Connolly
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-020-67962-y

More severe disturbance regimes drive the shift of a kelp forest to a sea urchin barren in south-eastern Australia
Cited by: 6
Author(s): Paul E. Carnell, Michael J. Keough
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-68952-w

The closed eye harbours a unique microbiome in dry eye disease
Cited by: 39
Author(s): Kent A. Willis, Cameron Postnikoff, Amelia Freeman, Gabriel Rezonzew, Kelly K. Nichols, Amit Gaggar, Charitharth Vivek Lal
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-68369-5

Fatty acid analyses provide novel insights on hippo defecation and consequences for aquatic food webs
Cited by: 5
Author(s): Jessica Dawson, Deena Pillay, Renzo Perissinotto, Nicole B. Richoux
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0197439

Bacterial DNA is present in the fetal intestine and overlaps with that in the placenta in mice
Cited by: 42
Author(s): Keith A. Martinez, Joann Romano-Keeler, Joseph P. Zackular, Daniel J. Moore, Robert M. Brucker, Christopher W. Hooper, Shumei Meng, Naoko Brown, S. Mallal, Jeff Reese, David M. Aronoff, Hakdong Shin, Maria Gloria Domínguez-Bello, Jörn-Hendrik Weitkamp
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-69112-w

17β-Estradiol supplementation changes gut microbiota diversity in intact and colorectal cancer-induced ICR male mice
Cited by: 32
Author(s): Chin Hee Song, Na Young Kim, Ryoung Hee Nam, Soo In Choi, Ha Na Lee, Young Joon Surh
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-69241-2

A carbohydrate-active enzyme (CAZy) profile links successful metabolic specialization of Prevotella to its abundance in gut microbiota
Cited by: 20
Author(s): Juhani Aakko, Sami Pietilä, Raine Toivonen, Anne Rokka, Kati Mokkala, Kirsi Laitinen, Laura L. Elo, Arno Hänninen
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0211673

Towards a sampling design for characterizing habitat-specific benthic biodiversity related to oxygen flux dynamics using Aquatic Eddy Covariance
Cited by: 19
Author(s): Iván F. Rodil, Karl M. Attard, Joanna Norkko, Ronnie N. Glud, Alf Norkko
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0131442

Effects of “Reduced” and “Business-As-Usual” CO2 Emission Scenarios on the Algal Territories of the Damselfish Pomacentrus wardi (Pomacentridae)
Cited by: 11
Author(s): Dorothea Bender, Connor M. Champ, David I. Kline, Guillermo Díaz-Pulido, Sophie Dove
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-69562-2

Distribution patterns, carbon sources and niche partitioning in cave shrimps (Atyidae: Typhlatya)
Cited by: 18
Author(s): Efraín M. Chávez-Solís, C. Solı́s, Nuno Simões, Maité Mascaró
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-70055-5

Asynchrony among insect pollinator groups and flowering plants with elevation
Cited by: 9
Author(s): Opeyemi Adedoja, Temitope Kehinde, Michael J. Samways
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0157910

Localised Effects of a Mega-Disturbance: Spatiotemporal Responses of Intertidal Sandy Shore Communities to the 2010 Chilean Earthquake
Cited by: 10
Author(s): Roger D. Sepúlveda, Nelson Valdivia
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0166523

A Microbiological Map of the Healthy Equine Gastrointestinal Tract
Cited by: 78
Author(s): Aaron C. Ericsson, Philip J. Johnson, Marco Aurélio Ferreira Lopes, Sonja C. Perry, Hannah R. Lanter
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-020-70745-0

The Anopheles coluzzii microbiome and its interaction with the intracellular parasite Wolbachia
Cited by: 21
Author(s): Timothy J. Straub, W. Robert Shaw, Perrine Marcenac, Simon P. Sawadogo, Roch K. Dabiré, Abdoulaye Diabaté, Flaminia Catteruccia, Daniel E. Neafsey
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0031681

Dispersal Patterns of Coastal Fish: Implications for Designing Networks of Marine Protected Areas
Cited by: 89
Author(s): Antonio Franco, Bronwyn M. Gillanders, Giuseppe E. De Benedetto, Antonio Pennetta, Giulio A. De Leo, Paolo Guidetti
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-020-70765-w

C57BL/6J substrain differences in response to high-fat diet intervention
Cited by: 32
Author(s): Majken Siersbæk, Nicholas Ditzel, Eva Kildall Hejbøl, Stine M. Præstholm, Lasse K. Markussen, Fabio Avolio, Lingzi Li, Lasse Lehtonen, Axel Kornerup Hansen, Henrik Daa Schrøder, Łukasz Krych, Susanne Mandrup, Louise Langhorn, Peter Bollen, Lars Grøntved
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0091283

Airborne Bacterial Communities in Residences: Similarities and Differences with Fungi
Cited by: 117
Author(s): Rachel I. Adams, Marzia Miletto, Steven E. Lindow, John W. Taylor, Thomas D. Bruns
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-020-71371-6

Altered gut microbiota correlated with systemic inflammation in children with Kawasaki disease
Cited by: 20
Author(s): Jie Chen, Yanghua Yue, Lu Wang, Zixin Deng, Yong-Hua Yuan, Ming‐Hui Zhao, Zijie Yuan, Changlian Tan, Youde Cao
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0034605

Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples
Cited by: 124
Author(s): Dana Willner, Joshua Daly, David M. Whiley, Keith Grimwood, Claire Wainwright, Philip Hugenholtz
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0213108

Influence of Crohn’s disease related polymorphisms in innate immune function on ileal microbiome
Cited by: 12
Author(s): Ellen Li, Yuanhao Zhang, Xinyu Tian, Xuefeng Wang, Grace Gathungu, Ashley Wolber, Shehzad S. Shiekh, R. Balfour Sartor, Nicholas O. Davidson, Matthew A. Ciorba, Wei Zhu, Leah M. Nelson, Charles E. Robertson, Daniel N. Frank
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-71633-3

IRF2 maintains the stemness of colonic stem cells by limiting physiological stress from interferon
Cited by: 12
Author(s): Kana Minamide, Taku Sato, Yusuke Nakanishi, Hiroshi Ohno, Tamotsu Kato, Jumpei Asano, Toshiaki Ohteki
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-71782-5

Micro-climatic effects on plant phenolics at the community level in a Mediterranean savanna
Cited by: 3
Author(s): Xoaquín Moreira, Luis Abdala‐Roberts, Maria Dolores Hidalgo-Galvez, Carla Vázquez‐González, Ignacio Manuel Pérez-Ramos
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0115225

The Antipsychotic Olanzapine Interacts with the Gut Microbiome to Cause Weight Gain in Mouse
Cited by: 135
Author(s): Andrew P. Morgan, James J. Crowley, Randal J. Nonneman, Corey R. Quackenbush, Cheryl N. Miller, Allison Ryan, Molly A. Bogue, Sur Herrera Paredes, Scott Yourstone, Ian M. Carroll, Thomas H. Kawula, Maureen A. Bower, R. Balfour Sartor, Patrick F. Sullivan
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-020-71603-9

Mitochondrial genomics reveals the evolutionary history of the porpoises (Phocoenidae) across the speciation continuum
Cited by: 12
Author(s): Yacine Ben Chehida, Julie Thumloup, Cassie A. Schumacher, Timothy T. Harkins, Àlex Aguilar, Asunción Borrell, Marisa Ferreira, Lorenzo Rojas‐Bracho, Kelly M. Robertson, Barbara L. Taylor, Gísli A. Víkingsson, Arthur Weyna, Jonathan Romiguier, Phillip A. Morin, Michaël C. Fontaine
Software Mentions: 1
Published: about 4 years ago

10.3390/microorganisms9091862

Age and Giardia intestinalis Infection Impact Canine Gut Microbiota
Cited by: 8
Author(s): Anne-Sophie Boucard, Myriam Thomas, Wilfried Lebon, Bruno Polack, Isabelle Florent, Philippe Langella, Luis G. Bermúdez‐Humarán
Software Mentions: 1
Published: about 3 years ago

10.1038/s41598-020-71791-4

Metagenomic sequencing of stool samples in Bangladeshi infants: virome association with poliovirus shedding after oral poliovirus vaccination
Cited by: 5
Author(s): Susanna K. Tan, Andrea Granados, Jérôme Bouquet, Yana Emmy Hoy-Schulz, Lauri Green, Scot Federman, Doug Stryke, Thomas D. Haggerty, Catherine Ley, Ming Te Yeh, Kaniz Jannat, Yvonne Maldonado, Raul Andino, Julie Parsonnet, Charles Y. Chiu
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0181531

Response of Posidonia oceanica seagrass and its epibiont communities to ocean acidification
Cited by: 28
Author(s): Katja Guilini, Miriam Weber, Dirk de Beer, M. Schneider, Massimiliano Molari, Christian Lott, Wanda Bodnar, Thibaud Mascart, Marleen De Troch, Ann Vanreusel
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-72653-9

Limited effect of radial oxygen loss on ammonia oxidizers in Typha angustifolia root hairs
Cited by: 1
Author(s): Elena Hernández‐del Amo, Iva Dolinová, Gal la Ramis-Jorba, Frédéric Gich, Lluís Bañeras
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-72635-x

Comparison of gut microbiota in exclusively breast-fed and formula-fed babies: a study of 91 term infants
Cited by: 107
Author(s): Jingran Ma, Zhenghong Li, Wenjuan Zhang, Chunli Zhang, Yuheng Zhang, Hua Mao, Na Zhuo, Hongyun Wang, Lin Wang, Dan Wu
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-72816-8

Effect of very low-protein diets supplemented with branched-chain amino acids on energy balance, plasma metabolomics and fecal microbiome of pigs
Cited by: 32
Author(s): Shelby Spring, Hasitha Premathilake, Chloe Bradway, Cedrick N Shili, Udaya DeSilva, Scott L. Carter, Adel Pezeshki
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-73293-9

Seasonal dynamics of lotic bacterial communities assessed by 16S rRNA gene amplicon deep sequencing
Cited by: 11
Author(s): Lisa Paruch, Adam M. Paruch, Hans Geir Eiken, Monica Skogen, Roald Sørheim
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-73649-1

Fruit host-dependent fungal communities in the microbiome of wild Queensland fruit fly larvae
Cited by: 7
Author(s): Rajib Majumder, Brodie Sutcliffe, Phillip W. Taylor, Toni A. Chapman
Software Mentions: 1
Published: about 4 years ago

10.1038/s41396-017-0026-4

The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence
Cited by: 64
Author(s): Francesca Mapelli, Ramona Marasco, Marco Fusi, Barbara Scaglia, George Tsiamis, Eleonora Rolli, Stilianos Fodelianakis, Kostas Bourtzis, Stefano Ventura, Fulvia Tambone, Fabrizio Adani, Sara Borin, Daniele Daffonchio
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-020-73702-z

Diel vertical migration into anoxic and high-pCO2 waters: acoustic and net-based krill observations in the Humboldt Current
Cited by: 11
Author(s): Ramiro Riquelme‐Bugueño, Iván Pérez-Santos, Nicolás Alegría, Cristian A. Vargas, Mauricio A. Urbina, Rubén Escribano
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-74379-0

Prebiotic effects of yeast mannan, which selectively promotes Bacteroides thetaiotaomicron and Bacteroides ovatus in a human colonic microbiota model
Cited by: 30
Author(s): Shunsuke Oba, Tadahiro Sunagawa, Reiko Tanihiro, Kyoko Awashima, Hiroshi Sugiyama, Tetsuji Odani, Yasunori Nakamura, Akihiko Kondo, Daisuke Sasaki, Kengo Sasaki
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-74670-0

Differential processing of dissolved and particulate organic matter by deep-sea sponges and their microbial symbionts
Cited by: 26
Author(s): Martijn C. Bart, A. de Kluijver, Sean Hoetjes, Samira Absalah, Benjamin Mueller, Ellen Kenchington, Hans Tore Rapp, Jasper M. de Goeij
Software Mentions: 1
Published: about 4 years ago

10.1111/mec.14839

Resolving the predator first paradox: Arthropod predator food webs in pioneer sites of glacier forelands
Cited by: 22
Author(s): Daniela Sint, Rüdiger Kaufmann, R. Mayer, Michael Traugott
Software Mentions: 1
Published: about 6 years ago

10.1038/s41396-019-0500-2

Consequences of microbial diversity in forest nitrogen cycling: diverse ammonifiers and specialized ammonia oxidizers
Cited by: 52
Author(s): Kazuo Isobe, Yuta Ise, Hiroyu Kato, Takayuki Oda, Christian E. Vincenot, Keisuke Koba, Ryunosuke Tateno, Keishi Senoo, Nobuhito Ohte
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-74586-9

Microbial community dynamics in phyto-thermotherapy baths viewed through next generation sequencing and metabolomics approach
Cited by: 4
Author(s): Elena Franciosi, Luca Narduzzi, Antonella Paradiso, Silvia Carlin, Kieran Tuohy, Alberto Beretta, Fulvio Mattivi
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-75117-2

Trophic downgrading reduces spatial variability on rocky reefs
Cited by: 7
Author(s): Matthew S. Edwards, Brenda Konar
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-75229-9

Increased intestinal permeability and gut dysbiosis in the R6/2 mouse model of Huntington’s disease
Cited by: 49
Author(s): Tiberiu Loredan Stan, Rana Soylu-Kucharz, Stephen Burleigh, Olena Prykhodko, Ling Cao, Naomi Franke, Marie Sjögren, Caroline Haikal, Frida Fåk Hållenius, Maria Björkqvist
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-75370-5

Interannual variability in the lipid and fatty acid profiles of east Australia-migrating humpback whales (Megaptera novaeangliae) across a 10-year timeline
Cited by: 15
Author(s): Jasmin Groß, Patti Virtue, Peter D. Nichols, Pascale Eisenmann, Courtney Waugh, Susan Bengtson Nash
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-75026-4

Effects of long-lasting social isolation and re-socialization on cognitive performance and brain activity: a longitudinal study in Octodon degus
Cited by: 27
Author(s): Daniela Rivera, Carolina B. Lindsay, Carolina A. Oliva, Juan Francisco Codocedo, Francisco Bozinovic, Nibaldo C. Inestrosa
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-75452-4

Drivers of tropical soil invertebrate community composition and richness across tropical secondary forests using DNA metasystematics
Cited by: 5
Author(s): Katie M. McGee, Teresita M. Porter, Michael Wright, Mehrdad Hajibabaei
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-76188-x

Increase in temperature enriches heat tolerant taxa in Aedes aegypti midguts
Cited by: 20
Author(s): Gorreti Maria Onyango, M. Sean Bialosuknia, Fred Payne, Nicholas Mathias, Alexander T. Ciota, D. Laura Kramer
Software Mentions: 1
Published: about 4 years ago

10.1038/s41396-020-00836-3

Bacterial microbiota similarity between predators and prey in a blue tit trophic network
Cited by: 14
Author(s): Hélène Dion-Phénix, Anne Charmantier, Christophe de Franceschi, Geneviève Bourret, Steven W. Kembel, Denis Réale
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-020-76545-w

Pelvic bone morphometric analysis in the dugong (Dugong dugon)
Cited by: 2
Author(s): Korakot Nganvongpanit, Phaothep Cherdsukjai, Burin Boonsri, Kittisak Buddhachat, Patcharaporn Kaewmong, Kongkiat Kittiwattanawong
Software Mentions: 1
Published: about 4 years ago

10.3390/microorganisms9040702

Gut Microbiome of a Multiethnic Community Possessed No Predominant Microbiota
Cited by: 3
Author(s): Wei Wei Thwe Khine, Anna Hui Ting Teo, Lucas Wee Wei Loong, Jarett Jun Hao Tan, Clarabelle Geok Hui Ang, W. F. Ng, Chuen Neng Lee, Congju Zhu, Quek Choon Lau, Yuan‐Kun Lee
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-020-76858-w

Seasonal patterns in stable isotope and fatty acid profiles of southern stingrays (Hypanus americana) at Stingray City Sandbar, Grand Cayman
Cited by: 3
Author(s): Lisa A. Hoopes, Tonya M. Clauss, Nicole E. Browning, Alexa J. Delaune, Bradley M. Wetherbee, Jessica C. Harvey, Guy Harvey
Software Mentions: 1
Published: about 4 years ago

10.1002/ece3.1488

Strategies of zooplanktivory shape the dynamics and diversity of littoral plankton communities: a mesocosm approach
Cited by: 11
Author(s): Laura Helenius, Anna Aymà Padrós, Elina Leskinen, Hannu Lehtonen, Leena Nurminen
Software Mentions: 1
Published: over 9 years ago

10.1002/ece3.5784

Evaluating the effects of large marine predators on mobile prey behavior across subtropical reef ecosystems
Cited by: 11
Author(s): Lindsay M Phenix, Dana Tricarico, Enrique Quintero, Mark E. Bond, Simon J. Brandl, Austin J. Gallagher
Software Mentions: 1
Published: about 5 years ago

10.1002/ece3.5666

Diurnal variation around an optimum and near‐critically high temperature does not alter the performance of an ectothermic aquatic grazer
Cited by: 13
Author(s): Tiina Salo, Tabea Kropf, Francis J. Burdon, Otto Seppälä
Software Mentions: 1
Published: about 5 years ago

10.1002/ece3.3820

The effect of isolation, fragmentation, and population bottlenecks on song structure of a Hawaiian honeycreeper
Cited by: 7
Author(s): Joshua Pang‐Ching, Kristina L. Paxton, Eben H. Paxton, Adam A. Pack, Patrick J. Hart
Software Mentions: 1
Published: almost 7 years ago

10.1002/ece3.7787

Drivers of litter mass loss and faunal composition of detritus patches change over time
Cited by: 3
Author(s): Franziska K. Seer, Gregor Putze, Steven C. Pennings, Martin Zimmer
Software Mentions: 1
Published: over 3 years ago

10.1002/ece3.4662

Coral microbiome diversity reflects mass coral bleaching susceptibility during the 2016 El Niño heat wave
Cited by: 51
Author(s): Stephanie G. Gardner, Emma F. Camp, David J. Smith, Tim Kahlke, Eslam O. Osman, Gilberte Gendron, Benjamin C. C. Hume, Claudia Pogoreutz, Christian R. Voolstra, David J. Suggett
Software Mentions: 1
Published: almost 6 years ago

10.1002/ece3.3717

Specific plasmid patterns and high rates of bacterial co-occurrence within the coral holobiont
Cited by: 16
Author(s): D. L. Leite, Joana Falcão Salles, Emiliano Nicolas Calderón, Jan Dirk van Elsas, Raquel S. Peixoto
Software Mentions: 1
Published: almost 7 years ago

10.1002/ece3.3829

Microgeographic morphological variation across larval wood frog populations associated with environment despite gene flow
Cited by: 2
Author(s): Amanda J. Zellmer
Software Mentions: 1
Published: almost 7 years ago

10.1002/ece3.5942

Ecological fitting is a sufficient driver of tight interactions between sunbirds and ornithophilous plants
Cited by: 8
Author(s): Štěpán Janeček, Kryštof Chmel, Guillermo Uceda Gómez, Petra Janečková, Eliška Chmelová, Zuzana Sejfová, Francis Luma Ewome
Software Mentions: 1
Published: almost 5 years ago

10.1002/ece3.2139

Evolutionary ecology of pipefish brooding structures: embryo survival and growth do not improve with a pouch
Cited by: 6
Author(s): Inês Braga Gonçalves, Ingrid Ahnesjö, Charlotta Kvarnemo
Software Mentions: 1
Published: over 8 years ago

10.1002/ece3.6272

Hydrology‐driven responses of herbivorous geese in relation to changes in food quantity and quality
Cited by: 12
Author(s): Pingyang Zhang, Yeai Zou, Yonghong Xie, Siqi Zhang, Xinsheng Chen, Feng Li, Zhong-Shan Deng, Hong Zhang, Wei Tu
Software Mentions: 1
Published: over 4 years ago

10.1002/ece3.4028

Caught in the web: Spider web architecture affects prey specialization and spider-prey stoichiometric relationships
Cited by: 21
Author(s): Lorraine Ludwig, Matthew A. Barbour, Jennifer Guevara, Leticia Avilés, Andrea F. Gonzalez
Software Mentions: 1
Published: over 6 years ago

Projects: cran: PERMANOVA

Papers Mentioning PERMANOVA 6,292