Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: PERMANOVA

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
2 versions
Latest release: about 3 years ago
299 downloads last month

Papers Mentioning PERMANOVA 6,292

10.1371/journal.pone.0192772
Elevated temperature drives kelp microbiome dysbiosis, while elevated carbon dioxide induces water microbiome disruption
Cited by: 79
Author(s): Jeremiah J. Minich, Megan M. Morris, Matt Brown, Michael P. Doane, Matthew S. Edwards, Todd P. Michael, Elizabeth A. Dinsdale
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-49823-5
Benchmarking urine storage and collection conditions for evaluating the female urinary microbiome
Cited by: 23
Author(s): Carrie E. Jung, Jessica Chopyk, Ji Hyun Shin, Emily S. Lukacz, Linda Brubaker, Leila K. Schwanemann, Rob Knight, Alan J. Wolfe, David T. Pride
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-49832-4
Distinct responses from bacterial, archaeal and fungal streambed communities to severe hydrological disturbances
Cited by: 19
Author(s): Giulia Gionchetta, Anna M. Romaní, Francesc Oliva, Joan Artigas
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-49854-y
Conventional and organic soil management as divergent drivers of resident and active fractions of major soil food web constituents
Cited by: 46
Author(s): Paula Harkes, Afnan Khalil Ahmad Suleiman, S.J.J. van den Elsen, J.J. de Haan, M.H.M. Holterman, Eiko E. Kuramae, J. Helder
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-49555-6
Disentangling the environmental impact of different human disturbances: a case study on islands
Cited by: 16
Author(s): Sebastian Steibl, Christian Laforsch
Software Mentions: 2
Published: about 5 years ago
10.3390/nu12113408
The Effects of Non-Nutritive Artificial Sweeteners, Aspartame and Sucralose, on the Gut Microbiome in Healthy Adults: Secondary Outcomes of a Randomized Double-Blinded Crossover Clinical Trial
Cited by: 43
Author(s): Samar Y Ahmad, James K. Friel, Dylan MacKay
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-019-50607-0
Ecotoxicological hazard of a mixture of glyphosate and aminomethylphosphonic acid to the mussel Mytilus galloprovincialis (Lamarck 1819)
Cited by: 26
Author(s): Valerio Matozzo, Marco Munari, Laura Masiero, Livio Finos, María Gabriella Marin
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-51291-w
Sexual and genotypic variation in terpene quantitative and qualitative profiles in the dioecious shrub Baccharis salicifolia
Cited by: 7
Author(s): Xoaquín Moreira, Luis Abdala‐Roberts, Colleen S. Nell, Carla Vázquez‐González, Jessica D. Pratt, Ken Keefover‐Ring, Kailen A. Mooney
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-50952-0
The capacity of wastewater treatment plants drives bacterial community structure and its assembly
Cited by: 22
Author(s): Young Kyung Kim, Keunje Yoo, Min Sung Kim, Il Ki Han, Minjoo Larry Lee, Bo Ram Kang, Tae Kwon Lee, Joonhong Park
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-51570-6
Bacterial, archaeal and micro-eukaryotic communities characterize a disease-suppressive or conducive soil and a cultivar resistant or susceptible to common scab
Cited by: 19
Author(s): Jan Kopecký, Zuzana Samkova, Ensyeh Sarikhani, Martina Kyselková, Marek Omelka, Václav Krištůfek, Jiří Diviš, G. L. Grundmann, Yvan Moënne‐Loccoz, Markéta Ságová-Marečková
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-51525-x
Hematopoietic Npc1 mutation shifts gut microbiota composition in Ldlr−/− mice on a high-fat, high-cholesterol diet
Cited by: 3
Author(s): Tom Houben, John Penders, Yvonne Oligschlaeger, Inês Magro dos Reis, Marc Jan Bonder, Debby P. Y. Koonen, Jingyuan Fu, Marten H. Hofker, Ronit Shiri-Sverdlov
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-51709-5
Competition structured a Late Cretaceous megaherbivorous dinosaur assemblage
Cited by: 26
Author(s): Jordan C. Mallon
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0141373
Hybridization between Yellowstone Cutthroat Trout and Rainbow Trout Alters the Expression of Muscle Growth-Related Genes and Their Relationships with Growth Patterns
Cited by: 5
Author(s): Carl O. Ostberg, Dorothy M. Chase, Lorenz Hauser
Software Mentions: 2
Published: about 9 years ago
10.3390/microorganisms8091291
Mining the Microbiome of Key Species from African Savanna Woodlands: Potential for Soil Health Improvement and Plant Growth Promotion
Cited by: 11
Author(s): Ivete Maquia, Paula Fareleira, Isabel Videira e Castro, Denise R. A. Brito, Ricardo Soares, Aniceto Chaúque, M.M. Ferreira-Pinto, Erica Lumini, Andrea Berruti, Natasha Ribeiro, Isabel Marques, Ana I. Ribeiro‐Barros
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-019-53060-1
Limnological effects of a large Amazonian run-of-river dam on the main river and drowned tributary valleys
Cited by: 26
Author(s): Rafael M. Almeida, Stephen K. Hamilton, Emma J. Rosi‐Marshall, João Durval Arantes, Nathan Barros, Gina Boemer, Anderson Gripp, Vera L. M. Huszar, Pedro C. Junger, M. G. de Lima, F. Pacheco, Dirceu Tornavoi de Carvalho, Alexander J. Reisinger, Lúcia Helena Sampaio da Silva, Fábio Roland
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-53073-w
Microbial changes in relation to oral mucositis in autologous hematopoietic stem cell transplantation recipients
Cited by: 31
Author(s): Alexa M. G. A. Laheij, Judith E. Raber-Durlacher, Renée G. A. Koppelmans, Marie-Charlotte D.N.J.M. Huysmans, Carin Potting, Stephanie J. M. van Leeuwen, Mette D. Hazenberg, Michael T. Brennan, Inger von Bültzingslöwen, Jan‐Erik Johansson, J.J. de Soet, Thijs M. Haverman, Mark J. Buijs, Bernd W. Brandt, F.R. Rozema, Nicole M. A. Blijlevens, Egija Zaura
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-53769-z
Wild specimens of sand fly phlebotomine Lutzomyia evansi, vector of leishmaniasis, show high abundance of Methylobacterium and natural carriage of Wolbachia and Cardinium types in the midgut microbiome
Cited by: 16
Author(s): Rafael José Vivero, Marcela Villegas-Plazas, Gloria Cadavid-Restrepo, Claudia Ximena Moreno Herrera, Sandra Uribe, Howard Junca
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0207703
The influence of depth and a subsea pipeline on fish assemblages and commercially fished species
Cited by: 29
Author(s): Todd Bond, Julian C. Partridge, Michael D. Taylor, Tim F. Cooper, Dianne L. McLean
Software Mentions: 2
Published: about 6 years ago
10.1038/s41598-019-54771-1
Effects of Long-term Cotton Continuous Cropping on Soil Microbiome
Cited by: 29
Author(s): Hui Xi, Jili Shen, Zhong Qu, Dingyi Yang, Shiming Liu, Xiaoqin Nie, Lu Zhu
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-55063-4
Land use change effects on diversity of soil bacterial, Acidobacterial and fungal communities in wetlands of the Sanjiang Plain, northeastern China
Cited by: 57
Author(s): Xin Sui, Rongtao Zhang, Beat Frey, Libin Yang, Mai‐He Li, Hongwei Ni
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-54869-6
Host phylogeny, diet, and habitat differentiate the gut microbiomes of Darwin’s finches on Santa Cruz Island
Cited by: 33
Author(s): Wesley T. Loo, Jefferson García-Loor, Rachael Y. Dudaniec, Sonia Kleindorfer, Colleen M. Cavanaugh
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-55290-9
Differences in the intestinal microbiome of healthy children and patients with newly diagnosed Crohn’s disease
Cited by: 84
Author(s): Kinga Kowalska-Duplaga, Tomasz Gosiewski, Przemysław Kapusta, Agnieszka Sroka-Oleksiak, Andrzej Wędrychowicz, Stanisław Pieczarkowski, Agnieszka H. Ludwig-Słomczyńska, Paweł Wołkow, Krzysztof Fyderek
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-55270-z
Phylogeographic patterns of intertidal arthropods (Acari, Oribatida) from southern Japanese islands reflect paleoclimatic events
Cited by: 8
Author(s): Tobias Pfingstl, Maximilian Wagner, Shimpei F. Hiruta, Stephan Koblmüller, Wataru Hagino, Satoshi Shimano
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-55720-8
Postmenopause as a key factor in the composition of the Endometrial Cancer Microbiome (ECbiome)
Cited by: 43
Author(s): Dana M. Walsh, Alexis N. Hokenstad, Jun Chen, Jaeyun Sung, Gregory D. Jenkins, Nicholas Chia, Heidi Nelson, Andrea Mariani, Marina Walther-Antonio
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0202863
Gamma-diversity partitioning of gobiid fishes (Teleostei: Gobiidae) ensemble along of Eastern Tropical Pacific: Biological inventory, latitudinal variation and species turnover
Cited by: 6
Author(s): Omar Valencia‐Méndez, Fabián Alejandro Rodríguez‐Zaragoza, Luis E. Calderón-Aguilera, Omár Domínguez-Domínguez, Andrés López‐Pérez
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-55408-z
Denitrification Aligns with N2 Fixation in Red Sea Corals
Cited by: 24
Author(s): Arjen Tilstra, Yusuf C. El-Khaled, Florian Roth, Nils Rädecker, Claudia Pogoreutz, Christian R. Voolstra, Christian Wild
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0195967
Water system is a controlling variable modulating bacterial diversity of gastrointestinal tract and performance in rainbow trout
Cited by: 18
Author(s): Omolola C. Betiku, Carl J. Yeoman, T. Gibson Gaylord, Benjamin Americus, Sarah K. Olivo, G. C. Duff, Wendy M. Sealey
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-56290-5
Fungal and bacterial diversity of Svalbard subglacial ice
Cited by: 44
Author(s): Laura Perini, Cene Gostinčar, Nina Gunde‐Cimerman
Software Mentions: 2
Published: almost 5 years ago
10.3390/microorganisms8111694
Seasonal Patterns of Dominant Microbes Involved in Central Nutrient Cycles in the Subsurface
Cited by: 11
Author(s): Patrick Lohmann, Simon Benk, Gerd Gleixner, Karin Potthast, Beate Michalzik, Nico Jehmlich, Martin von Bergen
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-019-57127-x
Integrative analysis of blood and gut microbiota data suggests a non-alcoholic fatty liver disease (NAFLD)-related disorder in French SLAdd minipigs
Cited by: 0
Author(s): Marco Moroldo, Peris M. Munyaka, Jérôme Lecardonnel, Gaëtan Lemonnier, Éric Venturi, Claire Chevaleyre, Isabelle P. Oswald, Jordi Estellé, Claire Rogel‐Gaillard
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-56741-z
Seasonal epiphytic microbial dynamics on grapevine leaves under biocontrol and copper fungicide treatments
Cited by: 27
Author(s): Alex Gobbi, Ifigeneia Kyrkou, Elisa Filippi, Lea Ellegaard-Jensen, Lars Hestbjerg Hansen
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0180859
Influence of lung CT changes in chronic obstructive pulmonary disease (COPD) on the human lung microbiome
Cited by: 31
Author(s): Marion Engel, David Endesfelder, Brigitte Schloter-Hai, Susanne Kublik, Michael S. Granitsiotis, Pierà Boschetto, Mariarita Stendardo, Imre Barta, Balázs Döme, Jean‐François Deleuze, Anne Boland, Joachim Müller–Quernheim, Antje Prasse, Tobias Welte, Jens M. Hohlfeld, Deepak Subramanian, David Parr, Marta Gut, Timm Greulich, Andreas Rembert Koczulla, Adam Nowiński, Dorota Górecka, Dave Singh, Sumit Gupta, Christopher E. Brightling, Harald Hoffmann, Marion Frankenberger, Thomas P. Hofer, Dorothe Burggraf, Marion Heiß-Neumann, Loems Ziegler-Heitbrock, Michael Schloter, Wolfgang zu Castell
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-020-58402-y
Wheat dwarfing influences selection of the rhizosphere microbiome
Cited by: 41
Author(s): Vanessa Nessner Kavamura, Rebekah J. Robinson, David Hughes, Ian M. Clark, Maike Rossmann, I. S. de Melo, P. R. Hirsch, Rodrigo Mendes, Tim H. Mauchline
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-58525-2
Fine-scale species distribution modelling and genotyping by sequencing to examine hybridisation between two narrow endemic plant species
Cited by: 11
Author(s): JE Ball, Todd Robinson, Grant Wardell‐Johnson, Jessica Bovill, Margaret Byrne, Paul Nevill
Software Mentions: 2
Published: almost 5 years ago
10.3390/microorganisms7050123
Microbial and Functional Profile of the Ceca from Laying Hens Affected by Feeding Prebiotics, Probiotics, and Synbiotics
Cited by: 19
Author(s): C. Pineda-Quiroga, Daniel Borda-Molina, Diego Chaves‐Moreno, R. Ruíz, Raquel Atxaerandio, Amélia Camarinha‐Silva, A. García-Rodríguez
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0208852
Enrichment of Verrucomicrobia, Actinobacteria and Burkholderiales drives selection of bacterial community from soil by maize roots in a traditional milpa agroecosystem
Cited by: 47
Author(s): Eneas Aguirre‐von‐Wobeser, Jorge Rocha, Lori R. Shapiro, Mayra de la Torre
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-020-58863-1
Wild blueberry proanthocyanidins shape distinct gut microbiota profile and influence glucose homeostasis and intestinal phenotypes in high-fat high-sucrose fed mice
Cited by: 76
Author(s): Maria Carolina Rodríguez-Daza, Laurence Daoust, Lemia Boutkrabt, Geneviève Pilon, Thibault Varin, Stéphanie Dudonné, Émile Lévy, André Marette, Denis Roy, Yves Desjardins
Software Mentions: 2
Published: almost 5 years ago
10.3390/nu12072088
Sex-Specific Differences in the Gut Microbiome in Response to Dietary Fiber Supplementation in IL-10-Deficient Mice
Cited by: 16
Author(s): Zhengxiao Zhang, Jae Eun Hyun, Aducio Thiesen, Heekuk Park, Naomi Hotte, Hikaru Watanabe, Takanobu Higashiyama, Karen Madsen
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-59104-1
Toxic tall fescue grazing increases susceptibility of the Angus steer fecal microbiota and plasma/urine metabolome to environmental effects
Cited by: 10
Author(s): Ryan S. Mote, Nicholas S. Hill, Joseph H. Skarlupka, ViLinh Tran, Douglas I. Walker, Zachary B. Turner, Zachary P. Sanders, Dean P. Jones, Garret Suen, Nikolay M. Filipov
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-59878-4
A comparison of bee communities between primary and mature secondary forests in the longleaf pine ecosystem
Cited by: 12
Author(s): Michael D. Ulyshen, Scott Pokswinski, J. Kevin Hiers
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-60131-1
Fecal bacteria and metabolite responses to dietary lysozyme in a sow model from late gestation until lactation
Cited by: 11
Author(s): Shengyu Xu, Jiankai Shi, Yanpeng Dong, Zimei Li, Xiaoling Wu, Yan Lin, Lianqiang Che, Jian Li, Bin Feng, Zhengfeng Fang, Yong Zhuo, Jianping Wang, De Wu, Zhihua Ren, Yanping Shen
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-60449-w
Characterization of intratissue bacterial communities and isolation of Escherichia coli from oral lichen planus lesions
Cited by: 16
Author(s): Keumjin Baek, Jaewon Lee, Ahreum Lee, Jun-Ho Lee, Hye‐Jung Yoon, Hee Kyung Park, Jongsik Chun, Youngnim Choi
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-60362-2
Ganoderma lucidum cultivation affect microbial community structure of soil, wood segments and tree roots
Cited by: 14
Author(s): Fei Ren, Yuguang Zhang, Hai Yu, Yong-An Zhang
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-60591-5
Insect pollination: an ecological process involved in the assembly of the seed microbiota
Cited by: 27
Author(s): Alberto Prado, Brice Marolleau, Bernard Vaissière, Matthieu Barret, Gloria Torres-Cortés
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-60052-z
Enrichment and characterisation of ethanol chain elongating communities from natural and engineered environments
Cited by: 24
Author(s): Pieter Candry, Shengle Huang, José M. Carvajal-Arroyo, Korneel Rabaey, Ramón Ganigué
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-60862-1
Difference in post-stress recovery of the gut microbiome and its altered metabolism after chronic adolescent stress in rats
Cited by: 19
Author(s): Mengyang Xu, Chen Wang, Kristen N. Krolick, Haifei Shi, Jiangjiang Zhu
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0112942
Müllerian Mimicry as a Result of Codivergence between Velvet Ants and Spider Wasps
Cited by: 15
Author(s): Juanita Rodríguez, James P. Pitts, Carol D. von Dohlen, Joseph S. Wilson
Software Mentions: 2
Published: about 10 years ago
10.1038/s41598-020-61407-2
Effects of enrofloxacin treatment on the bacterial microbiota of milk from goats with persistent mastitis
Cited by: 10
Author(s): Richard Costa Polveiro, Pedro Marcus Pereira Vidigal, Tiago Antônio de Oliveira Mendes, Ricardo Seiti Yamatogi, Magna Coroa Lima, Maria Aparecida Scatamburlo Moreira
Software Mentions: 2
Published: over 4 years ago
10.3390/nu13072446
Administration with Quinoa Protein Reduces the Blood Pressure in Spontaneously Hypertensive Rats and Modifies the Fecal Microbiota
Cited by: 18
Author(s): Huimin Guo, Yuqiong Hao, Xin Fan, Aurore Richel, Nadia Everaert, Xiushi Yang
Software Mentions: 2
Published: over 3 years ago
10.3390/microorganisms9020342
Unveiling the Bovine Epimural Microbiota Composition and Putative Function
Cited by: 22
Author(s): Cátia Pacífico, Renée M. Petri, Sara Ricci, Elsayed Mickdam, Stefanie U. Wetzels, Viktoria Neubauer, Qendrim Zebeli
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0137778
Edge Effects along a Seagrass Margin Result in an Increased Grazing Risk on Posidonia australis Transplants
Cited by: 9
Author(s): John Statton, Samuel Gustin-Craig, Kingsley W. Dixon, Gary A. Kendrick
Software Mentions: 2
Published: about 9 years ago
10.3390/microorganisms8020265
Comparative Analysis of Fecal Microbiota in Grasscutter (Thryonomys swinderianus) and Other Herbivorous Livestock in Ghana
Cited by: 2
Author(s): Kiyonori Kawasaki, Kenji Ohya, Tsutomu Omatsu, Yukie Katayama, Yasuhiro Takashima, Tsuyoshi Kinoshita, Justice Opare Odoi, Kotaro Sawai, Hideto Fukushi, Hirohito Ogawa, Miho Inoue‐Murayama, Tetsuya Mizutani, Christopher Adenyo, Yoshiki Matsumoto, Boniface B. Kayang
Software Mentions: 2
Published: almost 5 years ago
10.1128/mBio.02336-20
The Native Microbiome is Crucial for Offspring Generation and Fitness of <i>Aurelia aurita</i>
Cited by: 21
Author(s): Nancy Weiland‐Bräuer, Nicole Pinnow, Daniela Langfeldt, Anna Krystyna Roik, Simon Güllert, Cynthia Maria Chibani, Thorsten B.H. Reusch, Ruth A. Schmitz
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0077704
The Importance of Vertical and Horizontal Dimensions of the Sediment Matrix in Structuring Nematodes Across Spatial Scales
Cited by: 14
Author(s): Danilo Cândido Vieira, Gustavo Fonseca
Software Mentions: 2
Published: about 11 years ago
10.1128/mBio.00294-21
Effect of HIV/HAART and Other Clinical Variables on the Oral Mycobiome Using Multivariate Analyses
Cited by: 13
Author(s): Paul L. Fidel, Zach A. Thompson, Elizabeth A. Lilly, Carolina Granada, Kelly Treas, Kenneth R. DuBois, Laura Cook, Shahr B. Hashmi, Daniel J. Lisko, Chiranjit Mukherjee, José Antonio Vázquez, Michael E. Hagensee, Ann L. Griffen, Eugene J. Leys, Clifford J. Beall
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0039634
Habitat Specialization in Tropical Continental Shelf Demersal Fish Assemblages
Cited by: 86
Author(s): Ben Fitzpatrick, Euan S. Harvey, Andrew Heyward, Emily Twiggs, Jamie Colquhoun
Software Mentions: 2
Published: over 12 years ago
10.1128/mBio.01777-21
Signatures of COVID-19 Severity and Immune Response in the Respiratory Tract Microbiome
Cited by: 66
Author(s): Carter Merenstein, Guanxiang Liang, Samantha A. Whiteside, Ana G Cobián-Güemes, Madeline S Merlino, Louis J. Taylor, Abigail Glascock, Kyle Bittinger, Ceylan Tanes, Jevon Graham-Wooten, Layla A. Khatib, Ayannah S. Fitzgerald, Shantan Reddy, Amy E. Baxter, Josephine R. Giles, Derek A. Oldridge, Nuala J. Meyer, E. John Wherry, John E. McGinniss, Frederic D. Bushman, Ronald G. Collman
Software Mentions: 2
Published: over 3 years ago
10.1128/mSphere.00327-17
The Gut Microbiota of Healthy Aged Chinese Is Similar to That of the Healthy Young
Cited by: 130
Author(s): Gaorui Bian, Gregory B. Gloor, Aihua Gong, Changsheng Jia, Wei Zhang, Jun Hu, Hong Zhang, Yumei Zhang, Zhiyong Zhou, Jiangao Zhang, Jeremy P. Burton, Gregor Reid, Yongliang Xiao, Qiang Zeng, Kaiping Yang, Jiangang Li
Software Mentions: 2
Published: about 7 years ago
10.1128/mSphere.00366-17
Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon
Cited by: 8
Author(s): Bruno S. de O. Silva, Felipe H. Coutinho, Gustavo Bueno Gregoracci, Luciana Leomil, Louisi Souza de Oliveira, Adriana M. Fróes, Diogo A. Tschoeke, Ana Carolina Soares, Anderson de Souza Cabral, Nicholas D. Ward, Jeffrey E. Richey, Alex V. Krusche, Patricia L. Yager, Carlos Eduardo de Rezende, Cristiane C. Thompson, Fabiano L. Thompson
Software Mentions: 2
Published: about 7 years ago
10.1128/mSphereDirect.00527-17
Subgingival Microbiome Colonization and Cytokine Production during Early Dental Implant Healing
Cited by: 12
Author(s): Jeffrey B. Payne, Paul G. Johnson, Car Reen Kok, João Carlos Gomes-Neto, Amanda E. Ramer‐Tait, Marian J. Schmid, Robert W. Hutkins
Software Mentions: 2
Published: almost 7 years ago
10.1111/mec.15090
Dietary partitioning promotes the coexistence of planktivorous species on coral reefs
Cited by: 27
Author(s): Matthieu Leray, Alice L. Alldredge, Jen‐Hao Yang, Christopher P. Meyer, Sally J. Holbrook, Russell J. Schmitt, Nancy­ Knowlton­, Andrew J. Brooks
Software Mentions: 2
Published: over 5 years ago
10.1128/mSphere.00418-17
Effect of Environmental Factors and an Emerging Parasitic Disease on Gut Microbiome of Wild Salmonid Fish
Cited by: 48
Author(s): Anti Vasemägi, Marko Visse, Veljo Kisand
Software Mentions: 2
Published: almost 7 years ago
10.1111/mec.15369
Environmental plasticity and colonisation history in the Atlantic salmon microbiome: A translocation experiment
Cited by: 52
Author(s): Tamsyn M. Uren Webster, Deiene Rodríguez‐Barreto, Giovanni Castaldo, Peter Gough, Sofía Consuegra, Carlos García de Leániz
Software Mentions: 2
Published: almost 5 years ago
10.1111/mec.14696
Light availability impacts structure and function of phototrophic stream biofilms across domains and trophic levels
Cited by: 33
Author(s): Mia M. Bengtsson, Karoline Wagner, Clarissa Schwab, Tim Urich, Tom J. Battin
Software Mentions: 2
Published: over 6 years ago
10.1007/s11033-020-05786-9
Discriminating larvae of two syntopic Cychramus species (Coleoptera, Nitidulidae) by means of bar-HRM analysis
Cited by: 0
Author(s): Lukas Zangl, Hannes Oberreiter, Herbert Huss, Edith Stabentheiner, Christian Sturmbauer, Stephan Koblmüller
Software Mentions: 2
Published: about 4 years ago
10.1128/mSphere.00229-18
Potential Mechanism of Detoxification of Cyanide Compounds by Gut Microbiomes of Bamboo-Eating Pandas
Cited by: 49
Author(s): Lifeng Zhu, Yang Zhang, Ru Yao, Liangliang Xu, Hua Chen, Xun Gu, Tonggui Wu, Xiangdong Yang
Software Mentions: 2
Published: over 6 years ago
10.1093/molbev/msaa301
Genomic Analysis Enlightens Agaricales Lifestyle Evolution and Increasing Peroxidase Diversity
Cited by: 60
Author(s): Francisco J. Ruíz-Dueñas, J. M. Barrasa, Marisol Sánchez-García, Susana Camarero, Shingo Miyauchi, Ana Serrano, Dolores Linde, Rashid Babiker, Élodie Drula, Iván Ayuso‐Fernández, Remedios Pacheco, Guillermo Zermeño Padilla, Patricia Ferreira, Jorge Barriuso, Harald Kellner, Raúl Castanera, Manuel Alfaro, Lucı́a Ramı́rez, Antonio G. Pisabarro, Robert Riley, Alan Kuo, William Andreopoulos, Kurt LaButti, Jasmyn Pangilinan, Andrew Tritt, Anna Lipzen, Guifen He, Mi Yan, Vivian Ng, Igor V. Grigoriev, Daniel Cullen, Francis Martin, Marie‐Noëlle Rosso, Bernard Henrissat, David S. Hibbett, Ángel T. Martı́nez
Software Mentions: 2
Published: about 4 years ago
10.1093/molbev/msw119
Sex, Scavengers, and Chaperones: Transcriptome Secrets of Divergent<i>Symbiodinium</i>Thermal Tolerances
Cited by: 110
Author(s): Rachel A. Levin, Victor H. Beltran, Ross Hill, Staffan Kjelleberg, Diane McDougald, Peter D. Steinberg, Madeleine J. H. van Oppen
Software Mentions: 2
Published: over 8 years ago
10.3390/microorganisms9020205
Taxonomic and Functional Diversity of Heterotrophic Protists (Cercozoa and Endomyxa) from Biological Soil Crusts
Cited by: 15
Author(s): Samira Khanipour Roshan, Kenneth Dumack, Michael Bonkowski, Peter Leinweber, Ulf Karsten, Karin Glaser
Software Mentions: 2
Published: almost 4 years ago
10.1128/mSphere.00679-18
Comparison of Subtyping Approaches and the Underlying Drivers of Microbial Signatures for Chronic Rhinosinusitis
Cited by: 16
Author(s): Kristi Biswas, Raewyn Cavubati, Shan Gunaratna, Michael Hoggard, Sharon Waldvogel-Thurlow, Jiwon Hong, Kevin Chang, Brett Wagner Mackenzie, Michael W. Taylor, Richard Douglas
Software Mentions: 2
Published: almost 6 years ago
10.1128/mSphere.00446-19
Quantitatively Partitioning Microbial Genomic Traits among Taxonomic Ranks across the Microbial Tree of Life
Cited by: 4
Author(s): T. M. Royalty, Andrew D. Steen
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0199343
Seasonality modulates the predictive skills of diatom based salinity transfer functions
Cited by: 5
Author(s): Alejandra Goldenberg-Vilar, Timme H. Donders, Aleksandra Cvetkoska, Friederike Wagner-Cremer
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0193671
Evaluation of milk sample fractions for characterization of milk microbiota from healthy and clinical mastitis cows
Cited by: 49
Author(s): Svetlana Lima, M.L.S. Bicalho, R.C. Bicalho
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0044114
Recovery of Benthic Megafauna from Anthropogenic Disturbance at a Hydrocarbon Drilling Well (380 m Depth in the Norwegian Sea)
Cited by: 36
Author(s): Andrew R. Gates, Daniel O. B. Jones
Software Mentions: 2
Published: about 12 years ago
10.1371/journal.pone.0252242
Influence of seasonal changes and salinity on spinach phyllosphere bacterial functional assemblage
Cited by: 3
Author(s): A. Mark Ibekwe, Selda Örs, Jorge Ferreira, Xuan Li, Donald L. Suarez
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0220268
Species composition of sand flies (Diptera: Psychodidae) in caves of Quadrilátero Ferrífero, state of Minas Gerais, Brazil
Cited by: 10
Author(s): Aldenise Martins Campos, Rodrigo dos Anjos Maia, Débora Capucci, Adriano Pereira Paglia, José Dilermando Andrade Filho
Software Mentions: 2
Published: over 4 years ago
10.3390/microorganisms8030347
Aflatoxins: Occurrence, Exposure, and Binding to Lactobacillus Species from the Gut Microbiota of Rural Ugandan Children
Cited by: 12
Author(s): Alex Paul Wacoo, Prudence Atukunda, Grace Kyamazima Mehangye Muhoozi, Martin Braster, Marijke J. Wagner, Tim van den Broek, Wilbert Sybesma, Ane C. Westerberg, Per Ole Iversen, Remco Kort
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0250695
Description and comparison of the skin and ear canal microbiota of non-allergic and allergic German shepherd dogs using next generation sequencing
Cited by: 6
Author(s): Neoklis Apostolopoulos, Stefanie P. Glaeser, Ruchi Bagwe, Stefan Janssen, Ursula Mayer, Christa Ewers, Peter Kämpfer, Reto Neiger, Nina Thom
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0225933
Host-mediated microbiome engineering (HMME) of drought tolerance in the wheat rhizosphere
Cited by: 72
Author(s): Michael D. Jochum, Kelsey McWilliams, Elizabeth A. Pierson, Young‐Ki Jo
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0142536
Antepartum Antibiotic Treatment Increases Offspring Susceptibility to Experimental Colitis: A Role of the Gut Microbiota
Cited by: 117
Author(s): Peris M. Munyaka, Nour Eissa, Çharles N. Bernstein, Ehsan Khafipour, Jean–Eric Ghia
Software Mentions: 2
Published: about 9 years ago
10.3390/cancers12092619
Alterations in Gastric Microbial Communities Are Associated with Risk of Gastric Cancer in a Korean Population: A Case-Control Study
Cited by: 10
Author(s): Madhawa Gunathilake, Jeonghee Lee, Il Ju Choi, Young Il Kim, Jaekyung Yoon, Woo Jun Sul, Jihyun F. Kim, Jeongseon Kim
Software Mentions: 2
Published: about 4 years ago
10.3390/cancers13133332
Colorectal Cancer Patients Have Four Specific Bacterial Species in Oral and Gut Microbiota in Common—A Metagenomic Comparison with Healthy Subjects
Cited by: 18
Author(s): Yoshinori Uchino, Yuichi Goto, Yusuke Konishi, Kan Tanabe, Hiroko Toda, Mitsuru Wada, Yoshiaki Kita, Mahiro Beppu, Shinichiro Mori, Hiroshi Hara, Takao Otsuka, Shoji Natsugoe, Eiji Hara, Tetsuro Sugiura
Software Mentions: 2
Published: over 3 years ago
10.3390/nu12113225
Prebiotic Xylo-Oligosaccharides Ameliorate High-Fat-Diet-Induced Hepatic Steatosis in Rats
Cited by: 24
Author(s): Sanna Lensu, Raghunath Pariyani, Elina Mäkinen, Baoru Yang, Wisam Saleem, Eveliina Munukka, Maarit Lehti, Anastasiia Driuchina, Jere Lindén, Marja Tiirola, Leo Lahti, Satu Pekkala
Software Mentions: 2
Published: about 4 years ago
10.3390/nu12113451
Maternal Linoleic Acid Overconsumption Alters Offspring Gut and Adipose Tissue Homeostasis in Young but Not Older Adult Rats
Cited by: 3
Author(s): Justine Marchix, Charlène Alain, Sandrine Le Gall‐David, Luis A. Amador, Céline Druart, Nathalie M. Delzenne, Frédérique Barloy-Hubler, Philippe Legrand, Gaëlle Boudry
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0242965
Destabilizing effects on a classic tri-trophic oyster-reef cascade
Cited by: 4
Author(s): Virginia R. Schweiss, Chet F. Rakocinski
Software Mentions: 2
Published: almost 4 years ago
10.3390/microorganisms9081687
Altered Fecal Microbiotas and Organic Acid Concentrations Indicate Possible Gut Dysbiosis in University Rugby Players: An Observational Study
Cited by: 3
Author(s): So Morishima, Nobuyuki Oda, Hiromi Ito, Tomohiro Segawa, Machi Oda, Takamitsu Tsukahara, Yasuharu Kawase, Tomohisa Takagi, Yuji Naito, Mami Fujibayashi, Ryo Inoüe
Software Mentions: 2
Published: over 3 years ago
10.3390/microorganisms8071011
Autoimmune Hepatitis: Shifts in Gut Microbiota and Metabolic Pathways among Egyptian Patients
Cited by: 26
Author(s): Nahla M Elsherbiny, Mohammed Rammadan, Elham Ahmed Hassan, Marfoua S. Ali, Abeer S. Abd El-Rehim, Wael A. Abbas, Mohamed A A Abozaid, Ebtisam Hassanin, Helal F Hetta
Software Mentions: 2
Published: over 4 years ago
10.3390/nu12082364
Gut Microbiota Associations with Metabolic Health and Obesity Status in Older Adults
Cited by: 32
Author(s): Xiaozhong Zhong, Janas M. Harrington, Seán Millar, Ivan J. Perry, Paul W. O’Toole, Catherine M. Phillips
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0222824
Lipid and fatty acid dynamics by maternal Pacific bluefin tuna
Cited by: 10
Author(s): Yosuke Hiraoka, Yumi Okochi, Seiji Ohshimo, Tamaki Shimose, Hiroshi Ashida, Takuya Sato, Yasuhiro Ando
Software Mentions: 2
Published: about 5 years ago
10.3390/cells7120269
Proteogenomic Analysis of Burkholderia Species Strains 25 and 46 Isolated from Uraniferous Soils Reveals Multiple Mechanisms to Cope with Uranium Stress
Cited by: 15
Author(s): Meenakshi Agarwal, Ashish Pathak, Rajesh Rathore, Om Prakash, Rakesh Singh, Rajneesh Jaswal, John C. Seaman, Ashvini Chauhan
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0177083
Atoll-scale patterns in coral reef community structure: Human signatures on Ulithi Atoll, Micronesia
Cited by: 9
Author(s): Nicole L. Crane, Peter A. Nelson, Avigdor Abelson, Kristin Precoda, John Rulmal, Giacomo Bernardi, Michelle J. Paddack
Software Mentions: 2
Published: over 7 years ago
10.3390/cells10040823
A New Strain of Christensenella minuta as a Potential Biotherapy for Obesity and Associated Metabolic Diseases
Cited by: 31
Author(s): Wilfrid Mazier, Katy Le Corf, Ccori Martinez, Héloïse Tudela, Déborah Kissi, Camille Kropp, Chrislain Coubard, Marion Soto, Frédéric Elustondo, Georges Rawadi, Sandrine P. Claus
Software Mentions: 2
Published: over 3 years ago
10.1007/s00049-018-0257-5
Methyl-ketones in the scent glands of Opiliones: a chemical trait of cyphophthalmi retrieved in the dyspnoan Nemastoma triste
Cited by: 2
Author(s): Miriam Schaider, Tone Novak, Christian Komposch, Hans Jörg Leis, Günther Raspotnig
Software Mentions: 2
Published: over 6 years ago
10.1007/s00049-019-00288-y
The scent gland chemistry of neogoveid cyphophthalmids (Opiliones): an unusual methyljuglone from Metasiro savannahensis
Cited by: 1
Author(s): Günther Raspotnig, Felix Anderl, Ronald M. Clouse
Software Mentions: 2
Published: about 5 years ago
10.1002/cre2.139
Microbial and inflammatory‐based salivary biomarkers of head and neck squamous cell carcinoma
Cited by: 37
Author(s): Anna Vesty, Kim Gear, Kristi Biswas, Fiona J. Radcliff, Michael W. Taylor, Richard Douglas
Software Mentions: 2
Published: about 6 years ago
10.1093/cid/ciab207
<i>Megasphaera</i> in the Stool Microbiota Is Negatively Associated With Diarrheal Cryptosporidiosis
Cited by: 27
Author(s): Maureen A. Carey, Gregory L. Medlock, Masud Alam, Mamun Kabir, Uddin Mj, Uma Nayak, Jason A. Papin, Abu Syed Golam Faruque, Rashidul Haque, William A. Petri, Carol A. Gilchrist
Software Mentions: 2
Published: over 3 years ago
10.1186/s13601-020-00345-8
Fungal and bacterial microbiome dysbiosis and imbalance of trans-kingdom network in asthma
Cited by: 29
Author(s): Chengjie Huang, Yaling Yu, Wei Du, Yahui Liu, Ranran Dai, Wei Tang, Ping Wang, Chenhong Zhang, Guochao Shi
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0131944
Perilipin-2 Modulates Lipid Absorption and Microbiome Responses in the Mouse Intestine
Cited by: 42
Author(s): Daniel N. Frank, Elise S. Bales, Jenifer Monks, Matthew J. Jackman, Paul S. MacLean, Diana Ir, Charles E. Robertson, David J. Orlicky, James L. McManaman
Software Mentions: 2
Published: over 9 years ago
10.1038/s42003-020-01587-9
A unified framework for herbivore-to-producer biomass ratio reveals the relative influence of four ecological factors
Cited by: 3
Author(s): Takehiro Kazama, Jotaro Urabe, Masato Yamamichi, Kotaro Tokita, Xia Yin, Izumi Katano, Hideyuki Doi, Takehito Yoshida, Nelson G. Hairston
Software Mentions: 2
Published: almost 4 years ago
10.1038/s42003-021-02249-0
Supplier-origin mouse microbiomes significantly influence locomotor and anxiety-related behavior, body morphology, and metabolism
Cited by: 12
Author(s): Aaron C. Ericsson, Marcia L. Hart, Jessica Y. Kwan, Louise Lanoue, Lynette Bower, Renee Araiza, Kevin C K Lloyd, Craig L. Franklin
Software Mentions: 2
Published: over 3 years ago