10.7150/thno.43528

Rhein modulates host purine metabolism in intestine through gut microbiota and ameliorates experimental colitis
Cited by: 152
Author(s): Jiawei Wu, Zhonghong Wei, Peng Cheng, Cheng Qian, Fangming Xu, Yang Yu, Aiyun Wang, Wenxing Chen, Ziying Sun, Lu Yin
Software Mentions: 2
Published: over 6 years ago

10.3390/toxics9030054

Microbial Population Dynamics in Model Sewage Treatment Plants and the Fate and Effect of Gold Nanoparticles
Cited by: 3
Author(s): Karsten Schlich, Cecilia Díaz, Benjamin Gomez Pizarro, B Knopf, Ruben Schlinkert, Franziska Wege, Anne Jurack, Kerstin Hund‐Rinke
Software Mentions: 2
Published: over 5 years ago

10.3390/toxics9050093

Total and Metabolically Active Microbial Community of Aerobic Granular Sludge Systems Operated in Sequential Batch Reactors: Effect of Pharmaceutical Compounds
Cited by: 7
Author(s): Barbara Muñoz-Palazón, Aurora Rosa-Masegosa, Miguel Hurtado-Martinez, Alejandro Rodríguez-Sánchez, Alexander Link, Ramiro Vílchez-Vargas, Alejandro González‐Martínez, José Manuel López López
Software Mentions: 2
Published: over 5 years ago

10.3390/toxins7051431

Links between Genetic Groups, Indole Alkaloid Profiles and Ecology within the Grass-Parasitic Claviceps purpurea Species Complex
Cited by: 26
Author(s): Mariell Negård, Silvio Uhlig, Hävard Kauserud, Tom Andersen, Klaus Høiland, Trude Vrålstad
Software Mentions: 2
Published: over 11 years ago

10.3390/toxins12090580

Is a Central Sediment Sample Sufficient? Exploring Spatial and Temporal Microbial Diversity in a Small Lake
Cited by: 10
Author(s): Barbara Weisbrod, Susanna A. Wood, Konstanze Steiner, Ruby Whyte-Wilding, Jonathan Puddick, Olivier Laroche, Daniel R. Dietrich
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41398-020-0774-1

Minocycline-induced microbiome alterations predict cafeteria diet-induced spatial recognition memory impairments in rats
Cited by: 18
Author(s): Sarah‐Jane Leigh, Nadeem O. Kaakoush, R. Frederick Westbrook, Margaret J. Morris
Software Mentions: 2
Published: over 6 years ago

10.1186/s41182-020-00291-y

Diarrhea prevalence in a randomized, controlled prospective trial of point-of-use water filters in homes and schools in the Dominican Republic
Cited by: 13
Author(s): Nathan L. Tintle, Kristin Van De Griend, Rachel Ulrich, Randall D. Wade, Tena Baar, Emma Boven, Carolyn E. A. Cooper, Olivia Couch, Lauren Eekhoff, Benjamin Fry, Grace K. Goszkowicz, Maya A. Hecksel, Adam Heynen, Jade A. Laughlin, Sydney M. Les, Taylor R. Lombard, Bradley Munson, Jonas M. Peterson, Eric Schumann, Daniel J. Settecerri, Jacob E. Spry, Matthew J. Summerfield, Meghana Sunder, Daniel Wade, Caden G. Zonnefeld, Sarah A. Brokus, Francesco S. Moen, Adam Slater, Jonathan W. Peterson, Michael J. Pikaart, Brent P. Krueger, Aaron A. Best
Software Mentions: 2
Published: over 5 years ago

10.1128/mBio.01135-14

Spatial-Temporal Survey and Occupancy-Abundance Modeling To Predict Bacterial Community Dynamics in the Drinking Water Microbiome
Cited by: 145
Author(s): Ameet J. Pinto, Joanna L. Schroeder, Mary Lunn, William T. Sloan, Lutgarde Raskin
Software Mentions: 2
Published: about 12 years ago

10.1128/mBio.01072-16

Disease Severity and Immune Activity Relate to Distinct Interkingdom Gut Microbiome States in Ethnically Distinct Ulcerative Colitis Patients
Cited by: 71
Author(s): J H Mar, Brandon LaMere, David L. Lin, Sophia Levan, Michelle Nazareth, Uma Mahadevan, Susan V. Lynch
Software Mentions: 2
Published: almost 10 years ago

10.1128/mBio.01348-18

Ecophylogenetics Clarifies the Evolutionary Association between Mammals and Their Gut Microbiota
Cited by: 59
Author(s): Christopher A. Gaulke, Holly K. Arnold, Ian R. Humphreys, Steven W. Kembel, James P. O’Dwyer, Thomas J. Sharpton
Software Mentions: 2
Published: almost 8 years ago

10.1128/mBio.00568-19

Experimental Evidence that Stochasticity Contributes to Bacterial Composition and Functioning in a Decomposer Community
Cited by: 19
Author(s): Michaeline B. N. Albright, Alexander B. Chase, Jennifer B. H. Martiny
Software Mentions: 2
Published: over 7 years ago

10.1128/mBio.00903-19

Mice Fed an Obesogenic Western Diet, Administered Antibiotics, and Subjected to a Sterile Surgical Procedure Develop Lethal Septicemia with Multidrug-Resistant Pathobionts
Cited by: 34
Author(s): Sanjiv Hyoju, Alexander Zaborin, Robert Keskey, Anukriti Sharma, Wyatt Arnold, Fons van den Berg, Sangman Kim, Neil Gottel, Cindy Bethel, Angella Charnot-Katsikas, Jianxin Peng, Carleen M. E. M. Adriaansens, Esther Wang, Jack A. Gilbert, Olga Zaborina, John C. Alverdy
Software Mentions: 2
Published: about 7 years ago

10.3390/nu12113408

The Effects of Non-Nutritive Artificial Sweeteners, Aspartame and Sucralose, on the Gut Microbiome in Healthy Adults: Secondary Outcomes of a Randomized Double-Blinded Crossover Clinical Trial
Cited by: 43
Author(s): Samar Y Ahmad, James K. Friel, Dylan MacKay
Software Mentions: 2
Published: almost 6 years ago

10.3390/nu13072446

Administration with Quinoa Protein Reduces the Blood Pressure in Spontaneously Hypertensive Rats and Modifies the Fecal Microbiota
Cited by: 18
Author(s): Huimin Guo, Yuqiong Hao, Xin Fan, Aurore Richel, Nadia Everaert, Xiushi Yang
Software Mentions: 2
Published: about 5 years ago

10.3390/nu12113225

Prebiotic Xylo-Oligosaccharides Ameliorate High-Fat-Diet-Induced Hepatic Steatosis in Rats
Cited by: 24
Author(s): Sanna Lensu, Raghunath Pariyani, Elina Mäkinen, Baoru Yang, Wisam Saleem, Eveliina Munukka, Maarit Lehti, Anastasiia Driuchina, Jere Lindén, Marja Tiirola, Leo Lahti, Satu Pekkala
Software Mentions: 2
Published: almost 6 years ago

10.3390/nu12113451

Maternal Linoleic Acid Overconsumption Alters Offspring Gut and Adipose Tissue Homeostasis in Young but Not Older Adult Rats
Cited by: 3
Author(s): Justine Marchix, Charlène Alain, Sandrine Le Gall‐David, Luis A. Amador, Céline Druart, Nathalie M. Delzenne, Frédérique Barloy-Hubler, Philippe Legrand, Gaëlle Boudry
Software Mentions: 2
Published: almost 6 years ago

10.3390/nu12082364

Gut Microbiota Associations with Metabolic Health and Obesity Status in Older Adults
Cited by: 32
Author(s): Xiaozhong Zhong, Janas M. Harrington, Seán Millar, Ivan J. Perry, Paul W. O’Toole, Catherine M. Phillips
Software Mentions: 2
Published: about 6 years ago

10.3390/nu9040393

Differential Effect of Sucrose and Fructose in Combination with a High Fat Diet on Intestinal Microbiota and Kidney Oxidative Stress
Cited by: 64
Author(s): Adriana Rosas-Villegas, Mónica Sánchez‐Tapia, Azalia Ávila-Nava, V Mercy Ramírez, Armando R. Tovar, Nimbe Torres
Software Mentions: 2
Published: over 9 years ago

10.3390/nu13020636

Gut Microbiota Bacterial Species Associated with Mediterranean Diet-Related Food Groups in a Northern Spanish Population
Cited by: 39
Author(s): Carles Rosés, Amelia Marti, Salvador Quintana, José Ignacio Riezu-Boj, Julian Martínez, Fermı́n I. Milagro, Anna Barceló
Software Mentions: 2
Published: over 5 years ago

10.3390/nu13051496

Effects of Whole-Grain and Sugar Content in Infant Cereals on Gut Microbiota at Weaning: A Randomized Trial
Cited by: 8
Author(s): Julio Plaza‐Díaz, María Luisa Bernal, Sophie Schutte, Empar Chenoll, Salvador Genovés, Francisco M. Codoñer, Ángel Gil, Luis Manuel Sánchez-Siles
Software Mentions: 2
Published: over 5 years ago

10.3390/nu12072088

Sex-Specific Differences in the Gut Microbiome in Response to Dietary Fiber Supplementation in IL-10-Deficient Mice
Cited by: 16
Author(s): Zhengxiao Zhang, Jae Eun Hyun, Aducio Thiesen, Heekuk Park, Naomi Hotte, Hikaru Watanabe, Takanobu Higashiyama, Karen Madsen
Software Mentions: 2
Published: about 6 years ago

10.3390/biomedicines9070846

Microbiota Depletion Promotes Human Rotavirus Replication in an Adult Mouse Model
Cited by: 3
Author(s): Roberto Gozalbo-Rovira, Cristina Santiso-Bellón, Javier Buesa, Antonio Rubio‐del‐Campo, Susana Vila-Vicent, Carlos Muñoz, Marı́a J. Yebra, Vicente Monedero, Jesús Rodrı́guez-Dı́az
Software Mentions: 2
Published: about 5 years ago

10.3934/microbiol.2018.3.469

Differences in structure of northern Australian hypolithic communities according to location, rock type, and gross morphology
Cited by: 1
Author(s): Susannah P. Guenther, Karen S. Gibb, Alea Rose, Mirjam Kaestli, Keith A. Christian
Software Mentions: 2
Published: over 8 years ago

10.1186/s13568-020-01069-5

Microbial composition of sweetness-enhanced yoghurt during fermentation and storage
Cited by: 2
Author(s): Giuseppina Luzzi, Erik Brinks, Jan Fritsche, Charles M. A. P. Franz
Software Mentions: 2
Published: about 6 years ago

10.1186/s13568-018-0644-x

Disease outbreak accompanies the dispersive structure of shrimp gut bacterial community with a simple core microbiota
Cited by: 48
Author(s): Zhiyuan Yao, Kunjie Yang, Lei Huang, Xiaolin Huang, Linglin Qiuqian, Kai Wang, Demin Zhang
Software Mentions: 2
Published: about 8 years ago

10.18632/aging.102541

Age-related changes in microbial composition and function in cynomolgus macaques
Cited by: 21
Author(s): Jiajia Duan, Bangmin Yin, Wei Li, Tingjia Chai, Weiwei Liang, Yu Huang, Xunmin Tan, Peng Zheng, Jing Wu, Yifan Li, Yan Li, Wei Zhou
Software Mentions: 2
Published: over 6 years ago

10.18632/aging.104140

Interplay between gonadal hormones and postnatal overfeeding in defining sex-dependent differences in gut microbiota architecture
Cited by: 11
Author(s): Jose Antonio Santos-Marcos, Alexia Barroso, Oriol A. Rangel‐Zúñiga, Cecilia Perdices-López, Carmen Haro, Miguel A. Sánchez-Garrido, Helena Molina‐Abril, Claes Ohlsson, Pablo Pérez-Martı́nez, Matti Poutanen, José López‐Miranda, Francisco Pérez-Jiménez, Manuel Tena‐Sempere, Antonio Camargo
Software Mentions: 2
Published: almost 6 years ago

10.1152/ajpgi.00046.2020

Ridinilazole, a narrow spectrum antibiotic for treatment of <i>Clostridioides difficile</i> infection, enhances preservation of microbiota-dependent bile acids
Cited by: 24
Author(s): Xi Qian, Karin Yanagi, Anne Kane, Nicholas Alden, Ming Lei, David R. Snydman, Richard Vickers, Kyongbum Lee, Cheleste M. Thorpe
Software Mentions: 2
Published: about 6 years ago

10.1007/s13280-017-0929-3

Concentrations of lead and other elements in the liver of the white-tailed eagle (Haliaeetus albicilla), a European flagship species, wintering in Eastern Poland
Cited by: 28
Author(s): Ignacy Kitowski, Dariusz Jakubas, Dariusz Wiącek, Agnieszka Sujak
Software Mentions: 2
Published: about 9 years ago

10.1186/s42523-020-00053-5

Recovery and resiliency of skin microbial communities on the southern leopard frog (Lithobates sphenocephalus) following two biotic disturbances
Cited by: 5
Author(s): Denita Mychele Weeks, Matthew J. Parris, Shawn P. Brown
Software Mentions: 2
Published: almost 6 years ago

10.1186/s42523-021-00075-7

Microbiota in intestinal digesta of Atlantic salmon (Salmo salar), observed from late freshwater stage until one year in seawater, and effects of functional ingredients: a case study from a commercial sized research site in the Arctic region
Cited by: 33
Author(s): Jie Wang, Alexander Jaramillo-Torres, Yanxian Li, Trond M. Kortner, Karina Gajardo, Øyvind Jakobsen Brevik, Jan Vidar Jakobsen, Åshild Krogdahl
Software Mentions: 2
Published: over 5 years ago

10.1186/s42523-021-00124-1

High royal jelly production does not impact the gut microbiome of honey bees
Cited by: 1
Author(s): Megan E Damico, Olav Rueppell, Zack Shaffer, Bin Han, Kasie Raymann
Software Mentions: 2
Published: almost 5 years ago

10.1186/s42523-020-00026-8

Cloacal swabs and alcohol bird specimens are good proxies for compositional analyses of gut microbial communities of Great tits (Parus major)
Cited by: 21
Author(s): Kasun H. Bodawatta, Kateřina Pužejová, Kateřina Sam, Michael Poulsen, Knud A. Jønsson
Software Mentions: 2
Published: over 6 years ago

10.1186/s42523-021-00085-5

Effect of copper sulfate on the external microbiota of adult common snook (Centropomus undecimalis)
Cited by: 6
Author(s): Andrea M. Tarnecki, Noah J. Levi, Matthew Resley, Kevan L. Main
Software Mentions: 2
Published: over 5 years ago

10.1186/s42523-020-00046-4

Antibiotic-induced alterations and repopulation dynamics of yellowtail kingfish microbiota
Cited by: 21
Author(s): Thibault Philippe Raymond Albert Legrand, Sarah R. Catalano, Melissa L. Wos‐Oxley, James W. Wynne, Laura S. Weyrich, Alan Oxley
Software Mentions: 2
Published: about 6 years ago

10.1186/s42523-021-00099-z

Perinatal exposure to tetracycline contributes to lasting developmental effects on offspring
Cited by: 4
Author(s): Elizabeth M. Hill, Christopher D. Howard, Tracy L. Bale, Eldin Jašarević
Software Mentions: 2
Published: over 5 years ago

10.1186/s42523-021-00107-2

Sustainable plant-based diets promote rainbow trout gut microbiota richness and do not alter resistance to bacterial infection
Cited by: 13
Author(s): David Pérez-Pascual, Ana Elena Pérez‐Cobas, Dimitri Rigaudeau, Tatiana Rochat, Jean‐François Bernardet, Sandrine Skiba‐Cassy, Yann Marchand, Éric Duchaud, Jean‐Marc Ghigo
Software Mentions: 2
Published: about 5 years ago

10.1186/s42523-020-00030-y

Putative modulation of the gut microbiome by probiotics enhances preference for novelty in a preliminary double-blind placebo-controlled study in ferrets
Cited by: 5
Author(s): Supritha Dugyala, Travis Ptacek, Jeremy M. Simon, Yuhui Li, Flavio Fröhlich
Software Mentions: 2
Published: over 6 years ago

10.1186/s42523-020-00036-6

Evaluation of fecal Lactobacillus populations in dogs with idiopathic epilepsy: a pilot study
Cited by: 10
Author(s): Karen R. Muñana, Megan E. Jacob, Benjamin J. Callahan
Software Mentions: 2
Published: over 6 years ago

10.1186/s42523-021-00086-4

Fish predation on corals promotes the dispersal of coral symbionts
Cited by: 22
Author(s): Carsten G. B. Grupstra, Kristen M. Rabbitt, Lauren I. Howe‐Kerr, Adrienne M. S. Correa
Software Mentions: 2
Published: over 5 years ago

10.1186/s42523-021-00119-y

Temporal and nutritional effects on the weaner pig ileal microbiota
Cited by: 2
Author(s): Jolinda Pollock, Laura Glendinning, L. A. Smith, Hamna Mohsin, David L. Gally, Michael R. Hutchings, J.G.M. Houdijk
Software Mentions: 2
Published: about 5 years ago

10.3390/ani10081429

Effect of Dietary Supplementation with Coarse or Extruded Oat Hulls on Growth Performance, Blood Biochemical Parameters, Ceca Microbiota and Short Chain Fatty Acids in Broiler Chickens
Cited by: 6
Author(s): Deborah Adewole
Software Mentions: 2
Published: about 6 years ago

10.3390/ani10061014

Human–Wildlife Conflicts in Krakow City, Southern Poland
Cited by: 12
Author(s): Sayantani M. Basak, Izabela A. Wierzbowska, Agnieszka Gajda, Marcin Czarnołęski, Maciej Lesiak, Elżbieta Widera
Software Mentions: 2
Published: about 6 years ago

10.3390/ani10010017

Early Parenteral Administration of Ceftiofur has Gender-Specific Short- and Long-Term Effects on the Fecal Microbiota and Growth in Pigs from the Suckling to Growing Phase
Cited by: 24
Author(s): Ursula Ruczizka, Barbara U. Metzler‐Zebeli, Christine Unterweger, Evelyne Mann, Lukas Schwarz, Christian Knecht, Isabel Hennig-Pauka
Software Mentions: 2
Published: over 6 years ago

10.3390/ani11061825

Metagenomic Analysis of the Fecal Archaeome in Suckling Piglets Following Perinatal Tulathromycin Metaphylaxis
Cited by: 3
Author(s): Mohamed Zeineldin, Ameer Megahed, Benjamin Blair, Brian Aldridge, James Lowe
Software Mentions: 2
Published: about 5 years ago

10.3390/ani10050879

Early-Life Intake of an Isotonic Protein Drink Improves the Gut Microbial Profile of Piglets
Cited by: 0
Author(s): Stefan G. Buzoianu, Ava Firth, CallaBria Putrino, Fábio A. Vannucci
Software Mentions: 2
Published: over 6 years ago

10.3390/ani11061658

A Grain-Based SARA Challenge Affects the Composition of Epimural and Mucosa-Associated Bacterial Communities throughout the Digestive Tract of Dairy Cows
Cited by: 5
Author(s): J.C. Plaizier, Anne Mette Danscher, Paula Azevedo, Hooman Derakhshani, Pia Haubro Andersen, Ehsan Khafipour
Software Mentions: 2
Published: about 5 years ago

10.3390/ani9121052

Spider Monkeys Rule the Roost: Ateline Sleeping Sites Influence Rainforest Heterogeneity
Cited by: 8
Author(s): Andrew Whitworth, Lawrence Whittaker, Ruthmery Pillco Huarcaya, Eleanor Flatt, Marvin López Morales, Danielle Connor, Marina Garrido Priego, Adrian Forsyth, Christopher Beirne
Software Mentions: 2
Published: over 6 years ago

10.3390/ani11030755

A Comparison of the Colonic Microbiome and Volatile Organic Compound Metabolome of Anoplocephala perfoliata Infected and Non-Infected Horses: A Pilot Study
Cited by: 4
Author(s): Rachael Slater, Alessandra Frau, Jane E. Hodgkinson, Debra Archer, Chris Probert
Software Mentions: 2
Published: over 5 years ago

10.3390/ani10040585

Salmonella in Free-Ranging Quokkas (Setonix brachyurus) from Rottnest Island and the Mainland of Western Australia
Cited by: 5
Author(s): Pedro Martínez-Pérez, Timothy H. Hyndman, Patricia A. Fleming
Software Mentions: 2
Published: over 6 years ago

10.3390/ani11082243

Bacterial Community Characteristics in the Gastrointestinal Tract of Yak (Bos grunniens) Fully Grazed on Pasture of the Qinghai-Tibetan Plateau of China
Cited by: 5
Author(s): Xueping Han, Hongjin Liu, Linyong Hu, Na Zhao, Shixiao Xu, Zhien Lin, Yongwei Chen
Software Mentions: 2
Published: about 5 years ago

10.3390/ani10010137

Impact of Dietary Supplementation of Lactic Acid Bacteria Fermented Rapeseed with or without Macroalgae on Performance and Health of Piglets Following Omission of Medicinal Zinc from Weaner Diets
Cited by: 17
Author(s): Gizaw Dabessa Satessa, Paulina Tamez-Hidalgo, Yan Hui, Tomasz Cieplak, Łukasz Krych, Søren Kjærulff, Grete Brunsgaard, Dennis Sandris Nielsen, Mette Olaf Nielsen
Software Mentions: 2
Published: over 6 years ago

10.3390/ani11040982

A Multi-Biomarker Approach in European Sea Bass Exposed to Dynamic Temperature Changes under Dietary Supplementation with Origanum vulgare Essential Oil
Cited by: 6
Author(s): Francesca Rita Dinardo, Aristide Maggiolino, Elisabetta Casalino, M. Deflorio, Gerardo Centoducati
Software Mentions: 2
Published: over 5 years ago

10.3390/ani11061538

Chestnut Shell Tannins: Effects on Intestinal Inflammation and Dysbiosis in Zebrafish
Cited by: 13
Author(s): Graziella Orso, Mikhail Solovyev, Serena Facchiano, Evgeniia Tyrikova, Daniela Sateriale, Elena N. Kashinskaya, Caterina Pagliarulo, Seyed Hossein Hoseinifar, Evgeniy Simonov, Ettore Varricchio, Marina Paolucci, Roberta Imperatore
Software Mentions: 2
Published: over 5 years ago

10.3390/ani11061693

Evaluation of Tannin Extracts, Leonardite and Tributyrin Supplementation on Diarrhoea Incidence and Gut Microbiota of Weaned Piglets
Cited by: 14
Author(s): Matteo Dell’Anno, Serena Reggi, V. Caprarulo, Monika Hejna, C.A. Sgoifo Rossi, Maria Luisa Callegari, Alfonso Baldi, Luciana Rossi
Software Mentions: 2
Published: about 5 years ago

10.3390/ani9080498

Rumen and Fecal Microbial Community Structure of Holstein and Jersey Dairy Cows as Affected by Breed, Diet, and Residual Feed Intake
Cited by: 36
Author(s): Samantha Joan Noel, D.W. Olijhoek, Farran Mclean, Peter Løvendahl, Peter Lund, Ole Højberg
Software Mentions: 2
Published: about 7 years ago

10.3390/ani9121085

The Role of Housing Environment and Dietary Protein Source on the Gut Microbiota of Chicken
Cited by: 26
Author(s): Shawna M. Hubert, Morouj Al-Ajeeli, Christopher A. Bailey, Giridhar Athrey
Software Mentions: 2
Published: over 6 years ago

10.3390/ani11061561

Ruminal Protozoal Populations of Angus Steers Differing in Feed Efficiency
Cited by: 2
Author(s): Brooke A. Clemmons, Sung Bong Shin, Timothy P. L. Smith, Mallory Embree, Brynn H. Voy, Liesel G Schneider, Dallas R. Donohoe, Kyle J McLean, Phillip R. Myer
Software Mentions: 2
Published: over 5 years ago

10.3390/antibiotics10040367

Diversity and Risk Factors Associated with Multidrug and Methicillin-Resistant Staphylococci Isolated from Cats Admitted to a Veterinary Clinic in Eastern Province, Saudi Arabia
Cited by: 7
Author(s): Ahmed Elmoslemany, Ibrahim Elsohaby, Mohammed Alorabi, Mohamed Alkafafy, Theeb Al-Marri, Ali Al-Doweriej, Fanan A. Alaql, Abdullah I. A. Al-Mubarak, Mahmoud Fayez
Software Mentions: 2
Published: over 5 years ago

10.1093/aobpla/plab035

Functional traits predict resident plant response to <i>Reynoutria japonica</i> invasion in riparian and fallow communities in southern Poland
Cited by: 3
Author(s): Marcin W. Woch, Paweł Kapusta, Małgorzata Stanek, Szymon Zubek, Anna M. Stefanowicz
Software Mentions: 2
Published: about 5 years ago

10.1093/aobpla/plv003

Effects of disturbance on vegetation by sand accretion and erosion across coastal dune habitats on a barrier island
Cited by: 27
Author(s): Thomas E. Miller
Software Mentions: 2
Published: over 11 years ago

10.1128/AEM.02150-17

A Lactobacillus-Deficient Vaginal Microbiota Dominates Postpartum Women in Rural Malawi
Cited by: 47
Author(s): Ronan Doyle, Austridia Gondwe, Yue‐Mei Fan, Kenneth Maleta, Per Ashorn, Nigel Klein, Kathryn Harris
Software Mentions: 2
Published: over 8 years ago

10.1128/AEM.00252-20

Microbial Diversity in Deep-Subsurface Hot Brines of Northwest Poland: from Community Structure to Isolate Characteristics
Cited by: 8
Author(s): Agnieszka Kalwasińska, Arkadiusz Krawiec, Edyta Deja-Sikora, Marcin Gołębiewski, Przemysław Kosobucki, Maria Swiontek Brzezinska, Maciej Walczak
Software Mentions: 2
Published: over 6 years ago

10.1128/AEM.00181-18

Crown-of-Thorns Sea Star Acanthaster cf. solaris Has Tissue-Characteristic Microbiomes with Potential Roles in Health and Reproduction
Cited by: 17
Author(s): Lone Høj, Natalie Levy, Brett K. Baillie, Peta L. Clode, Raphael C. Strohmaier, Nachshon Siboni, Nicole S. Webster, Sven Uthicke, David G. Bourne
Software Mentions: 2
Published: about 8 years ago

10.1128/AEM.00481-18

Molecular Epidemiology of Shiga Toxin-Producing Escherichia coli (STEC) on New Zealand Dairy Farms: Application of a Culture-Independent Assay and Whole-Genome Sequencing
Cited by: 28
Author(s): A. Springer Browne, Anne C. Midwinter, Helen Withers, Adrian L. Cookson, Patrick J. Biggs, Jonathan Marshall, Jackie Benschop, S.C. Hathaway, N. A. Haack, Rukhshana N. Akhter, Nigel P. French
Software Mentions: 2
Published: about 8 years ago

10.1128/AEM.00963-19

Microbial Succession of Anaerobic Chitin Degradation in Freshwater Sediments
Cited by: 11
Author(s): Susanne Wörner, Michael Pester
Software Mentions: 2
Published: almost 7 years ago

10.1128/AEM.00691-18

Interpopulation Variation in the Atlantic Salmon Microbiome Reflects Environmental and Genetic Diversity
Cited by: 89
Author(s): Tamsyn M. Uren Webster, Sofía Consuegra, Matthew D. Hitchings, Carlos García de Leániz
Software Mentions: 2
Published: about 8 years ago

10.1128/AEM.02371-20

Manipulation of Saliva-Derived Microcosm Biofilms To Resemble Dysbiotic Subgingival Microbiota
Cited by: 2
Author(s): Yaling Jiang, Bernd W. Brandt, Mark J. Buijs, Lei Cheng, R.A.M. Exterkate, Wim Crielaard, Dongsheng Deng
Software Mentions: 2
Published: over 5 years ago

10.1128/AEM.00842-21

Long-Term Biocide Efficacy and Its Effect on a Souring Microbial Community
Cited by: 3
Author(s): Xiang Shi, Daiane Aparecida Francisco de Oliveira, Lea Holsten, Katrin Steinhauer, Júlia R. de Rezende
Software Mentions: 2
Published: about 5 years ago

10.1007/s00253-021-11252-8

Impact of a fermented soy beverage supplemented with acerola by-product on the gut microbiota from lean and obese subjects using an in vitro model of the human colon
Cited by: 13
Author(s): A. D. S. Vieira, Carlota Bussolo de Souza, Marina Padilha, Erwin G. Zoetendal, Hauke Smidt, Susana Marta Isay Saad, Koen Venema
Software Mentions: 2
Published: over 5 years ago

10.1007/s00253-021-11264-4

Gut microbiota profiles and characterization of cultivable fungal isolates in IBS patients
Cited by: 27
Author(s): Piero Sciavilla, Francesco Strati, Monica Di Paola, Monica Marianna Modesto, Francesco Vitali, Duccio Cavalieri, G.M. Prati, Maura Di Vito, Giovanni Aragona, Carlotta De Filippo, Paola Mattarelli
Software Mentions: 2
Published: over 5 years ago

10.1007/s00253-019-10235-0

Bryophytes and the symbiotic microorganisms, the pioneers of vegetation restoration in karst rocky desertification areas in southwestern China
Cited by: 23
Author(s): Wei Cao, Yingfei Xiong, De-Gang Zhao, Hao Tan, Jiaojiao Qu
Software Mentions: 2
Published: over 6 years ago

10.1002/aps3.1223

Utilizing herbarium specimens to quantify historical mycorrhizal communities
Cited by: 15
Author(s): J. Mason Heberling, David Burke
Software Mentions: 2
Published: over 7 years ago

10.1016/j.apsoil.2018.05.015

Spatial structuring of soil microbial communities in commercial apple orchards
Cited by: 46
Author(s): Greg Deakin, Emma L. Tilston, Julie Bennett, Tom Passey, Nicola Harrison, Felicidad Fernández-Fernández, Xiangming Xu
Software Mentions: 2
Published: almost 8 years ago

10.1186/2046-9063-9-22

Detritus-based assemblage responses under salinity stress conditions in a disused aquatic artificial ecosystem
Cited by: 3
Author(s): Fulvio Cerfolli, Bruno Bellisario, Corrado Battisti
Software Mentions: 2
Published: over 13 years ago

10.1007/s00244-017-0481-y

Factors Affecting Element Concentrations in Eggshells of Three Sympatrically Nesting Waterbirds in Northern Poland
Cited by: 3
Author(s): Ignacy Kitowski, Dariusz Jakubas, Piotr Indykiewicz, Dariusz Wiącek
Software Mentions: 2
Published: almost 9 years ago

10.1007/s00203-021-02196-8

Impacts of replanting American ginseng on fungal assembly and abundance in response to disease outbreaks
Cited by: 19
Author(s): Ji Li, Lei Tian, Fahad Nasir, Jingjing Chang, Chunguang Chang, Jianfeng Zhang, Xiujun Li, Chunjie Tian
Software Mentions: 2
Published: over 5 years ago

10.1186/s12859-020-03666-4

SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
Cited by: 33
Author(s): Stevenn Volant, Pierre Lechat, Perrine Woringer, Laurence Motreff, Pascal Campagne, Christophe Malabat, Sean Kennedy, Amine Ghozlane
Software Mentions: 2
Published: about 6 years ago

10.1186/s12859-019-3153-2

3-Dimensional facial expression recognition in human using multi-points warping
Cited by: 11
Author(s): Olalekan Agbolade, Azree Nazri, Razali Yaakob, Abdul Ghani, Yoke Kqueen Cheah
Software Mentions: 2
Published: over 6 years ago

10.1186/s12915-017-0459-2

A multi-trait systems approach reveals a response cascade to bleaching in corals
Cited by: 42
Author(s): Stephanie G. Gardner, Jean-Baptiste Raina, Matthew R. Nitschke, Daniel A. Nielsen, Michael Stat, Cherie A. Motti, Peter J. Ralph, Katherina Petrou
Software Mentions: 2
Published: over 8 years ago

10.1186/s12885-020-07007-9

Integration of genomics, metagenomics, and metabolomics to identify interplay between susceptibility alleles and microbiota in adenoma initiation
Cited by: 9
Author(s): Jacob E. Moskowitz, Anthony Doran, Zhentian Lei, Susheel Bhanu Busi, Marcia L. Hart, Craig L. Franklin, Lloyd W. Sumner, Thomas M. Keane
Software Mentions: 2
Published: about 6 years ago

10.1186/s12906-021-03220-6

Efficacy of a curcumin extract (Curcugen™) on gastrointestinal symptoms and intestinal microbiota in adults with self-reported digestive complaints: a randomised, double-blind, placebo-controlled study
Cited by: 16
Author(s): Adrian L. Lopresti, Stephen J. Smith, Alethea Rea, Shavon Michel
Software Mentions: 2
Published: over 5 years ago

10.1186/s12898-018-0164-1

Interference competition as a key determinant for spatial distribution of mangrove crabs
Cited by: 19
Author(s): Stefano Cannicci, Marco Fusi, Filippo Cimò, Farid Dahdouh‐Guebas, Sara Fratini
Software Mentions: 2
Published: over 8 years ago

10.1186/s12898-019-0268-2

Shell resource partitioning as a mechanism of coexistence in two co-occurring terrestrial hermit crab species
Cited by: 3
Author(s): Sebastian Steibl, Christian Laforsch
Software Mentions: 2
Published: over 6 years ago

10.1186/s12898-015-0036-x

Nectar sugars and bird visitation define a floral niche for basidiomycetous yeast on the Canary Islands
Cited by: 50
Author(s): Moritz Mittelbach, Andrey Yurkov, Daniele Nocentini, Massimo Nepi, Maximilian Weigend, Dominik Begerow
Software Mentions: 2
Published: over 11 years ago

10.1186/s12862-019-1442-z

Genetic and morphological divergence at a biogeographic break in the beach-dwelling brooder Excirolana hirsuticauda Menzies (Crustacea, Peracarida)
Cited by: 15
Author(s): Pilar A. Haye, Nicolás I. Segovia, Andrea I. Varela, Rodrigo Rojas, Marcelo M. Rivadeneira, Martín Thiel
Software Mentions: 2
Published: about 7 years ago

10.1186/s12862-017-0908-0

Low genetic but high morphological variation over more than 1000 km coastline refutes omnipresence of cryptic diversity in marine nematodes
Cited by: 21
Author(s): Daniel Oliveira, Wilfrida Decraemer, Tom Moens, Giovanni dos Santos, Sofie Derycke
Software Mentions: 2
Published: over 9 years ago

10.1186/s12862-020-01727-z

You don’t have the guts: a diverse set of fungi survive passage through Macrotermes bellicosus termite guts
Cited by: 6
Author(s): Nick Bos, Leandro Guimarães, Romen Palenzuela, Justinn Renelies‐Hamilton, Lorrie Maccario, Simon Kolotchèlèma Silué, N’golo Abdoulaye Koné, Michael Poulsen
Software Mentions: 2
Published: over 5 years ago

10.1186/s12876-018-0896-6

Evaluating gut microbiota profiles from archived fecal samples
Cited by: 20
Author(s): Trine B. Rounge, Roger Meisal, Jan Inge Nordby, Ole Herman Ambur, Thomas de Lange, Geir Hoff
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12863-020-00946-z

Genetic structure and symbiotic profile of worldwide natural populations of the Mediterranean fruit fly, Ceratitis capitata
Cited by: 13
Author(s): Katerina Nikolouli, Antonios A. Augustinos, Panagiota Stathopoulou, Elias Asimakis, Anastassios C. Mintzas, Kostas Bourtzis, George Tsiamis
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-019-5813-z

Mapping gastrointestinal gene expression patterns in wild primates and humans via fecal RNA-seq
Cited by: 8
Author(s): Ashok Sharma, Barbora Pafčo, Klára Vlčková, Barbora Červená, Jakub Kreisinger, Samuel Davison, Karen Beeri, Terence Fuh, Steven R. Leigh, Michael B. Burns, Ran Blekhman, Klára J. Petrželková, Andrés Gómez
Software Mentions: 2
Published: about 7 years ago

10.1186/s12864-017-4215-3

IL-17 signalling restructures the nasal microbiome and drives dynamic changes following Streptococcus pneumoniae colonization
Cited by: 12
Author(s): Neil D. Ritchie, Umer Zeeshan Ijaz, Tom Evans
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12879-020-05427-3

Altered respiratory microbiota composition and functionality associated with asthma early in life
Cited by: 11
Author(s): Mohammad Tahseen Al Bataineh, Rifat Hamoudi, Nihar Ranjan Dash, Rakhee K. Ramakrishnan, Mohamad A. Almasalmeh, Hanan Abdulgader Sharif, Mohamed S. Al-Hajjaj, Qutayba Hamid
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12916-021-01991-w

Gestational diabetes mellitus is associated with the neonatal gut microbiota and metabolome
Cited by: 32
Author(s): Ting Chen, Yufeng Qin, Minjian Chen, Yuqing Zhang, Xu Wang, Tianyu Dong, Guanglin Chen, Xian Sun, Ting Lu, Richard Allen White, Ye Peng, Hein Min Tun, Yankai Xia
Software Mentions: 2
Published: over 5 years ago

10.1186/s12881-020-01115-w

Associations of NOD2 polymorphisms with Erysipelotrichaceae in stool of in healthy first degree relatives of Crohn’s disease subjects
Cited by: 10
Author(s): Williams Turpin, Larbi Bedrani, Osvaldo Espin‐Garcia, Wei Xu, Mark S. Silverberg, Michelle I. Smith, Juan A. Raygoza Garay, Sun-Ho Lee, David S. Guttman, Anne M. Griffiths, Paul Martin, Remo Panaccione, Hien Q. Huynh, Hillary Steinhart, Guy Aumais, Levinus A. Dieleman, Dan Turner, Andrew D. Paterson, Kenneth Croitoru
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12866-018-1257-x

A metagenome-wide association study of gut microbiota in asthma in UK adults
Cited by: 71
Author(s): Qi Wang, Fĕi Li, Bishan Liang, Yuhu Liang, Sijie Chen, Xiao‐Dong Mo, Yanmei Ju, Hui Zhao, Huijue Jia, Timothy D. Spector, Hailiang Xie, Ruijin Guo
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12866-017-1098-z

Comparison of rumen bacterial communities in dairy herds of different production
Cited by: 50
Author(s): Nagaraju Indugu, Bonnie Vecchiarelli, Linda D. Baker, James D. Ferguson, Jairam Vanamala, Dipti Pitta
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12866-017-1101-8

A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome
Cited by: 173
Author(s): Imane Allali, Jason W. Arnold, Jeffrey Roach, María Belén Cadenas, Natasha Butz, Hosni M. Hassan, Matthew D. Koci, Anne Ballou, Mary Mendoza, Rizwana Ali, M. Andrea Azcárate-Peril
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12866-019-1399-5

Gut microbiome patterns correlate with higher postoperative complication rates after pancreatic surgery
Cited by: 34
Author(s): Felix C. F. Schmitt, Thorsten Brenner, Florian Uhle, Svenja Loesch, Thilo Hackert, Alexis Ulrich, Stefan Hofer, Alexander H. Dalpke, Markus Weigand, Sébastien Boutin
Software Mentions: 2
Published: over 7 years ago

10.1186/s12866-018-1169-9

Modulations in the offspring gut microbiome are refractory to postnatal synbiotic supplementation among juvenile primates
Cited by: 19
Author(s): Ryan M. Pace, Amanda Prince, Jun Ma, Benjamin D. Belfort, Alexia S. Harvey, Min Hu, Karalee Baquero, Peter E. Blundell, Diana Takahashi, Tyler A. Dean, Paul Kievit, Elinor L. Sullivan, Jacob E. Friedman, Kevin L. Grove, Kjersti M. Aagaard
Software Mentions: 2
Published: over 8 years ago