Projects: cran: PERMANOVA

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
2 versions
Latest release: almost 5 years ago
299 downloads last month

Science Score: 85/100
Starting Score: 100 points
Bonuses:
Penalties:
  • -15 No science keywords
    No scientific terms found in keywords/classifiers

Very Likely Science (85)

Papers Mentioning PERMANOVA 6,292

10.3389/fpls.2020.571363
Species-Specific Trait Responses of Three Tropical Seagrasses to Multiple Stressors: The Case of Increasing Temperature and Nutrient Enrichment
Cited by: 20
Author(s): Inés G. Viana, Agustín Moreira‐Saporiti, Mirta Teichberg
Software Mentions: 2
Published: almost 6 years ago
10.3389/fpls.2020.00404
Warming Effects on Periphyton Community and Abundance in Different Seasons Are Influenced by Nutrient State and Plant Type: A Shallow Lake Mesocosm Study
Cited by: 20
Author(s): Beibei Hao, Haoping Wu, Zhen Wei, HyunBin Jo, Yanpeng Cai, Erik Jeppesen, Wei Li
Software Mentions: 2
Published: over 6 years ago
10.3389/fpls.2017.01357
Spatiotemporal Variation and Networks in the Mycobiome of the Wheat Canopy
Cited by: 38
Author(s): Rumakanta Sapkota, Lise Nistrup Jørgensen, Mogens Nicolaisen
Software Mentions: 2
Published: about 9 years ago
10.3389/fpsyt.2020.00518
Paroxetine Administration Affects Microbiota and Bile Acid Levels in Mice
Cited by: 16
Author(s): Frederik Dethloff, Fernando Vargas, Emmanuel O. Elijah, Robert A. Quinn, Dong Ik Park, David P. Herzog, Marianne B. Müller, Emily C. Gentry, Rob Knight, Antonio González, Pieter C. Dorrestein, Christoph W. Turck
Software Mentions: 2
Published: about 6 years ago
10.3389/fpubh.2021.657784
Insight Into Microbial Community Aerosols Associated With Electronic Waste Handling Facilities by Culture-Dependent and Culture-Independent Methods
Cited by: 6
Author(s): Yimin Pan, Qingyun Ren, Pei Chen, Jiguo Wu, Zhen Wu, Guoxia Zhang
Software Mentions: 2
Published: over 5 years ago
10.3389/fvets.2020.572142
Effect of Probiotics and Multi-Component Feed Additives on Microbiota, Gut Barrier and Immune Responses in Broiler Chickens During Subclinical Necrotic Enteritis
Cited by: 26
Author(s): Nima K. Emami, Ali Çalık, Mallory B. White, E.A. Kimminau, Rami A. Dalloul
Software Mentions: 2
Published: almost 6 years ago
10.1080/19490976.2021.1903826
Cohousing-mediated microbiota transfer from milk bioactive components-dosed mice ameliorate colitis by remodeling colonic mucus barrier and lamina propria macrophages
Cited by: 17
Author(s): Cong Liu, Shimeng Huang, Zhenhua Wu, Tiantian Li, Na Li, Bing Zhang, Dandan Han, Shilan Wang, Jiangchao Zhao, Junjun Wang
Software Mentions: 2
Published: over 5 years ago
10.1080/19490976.2021.1897217
Gut bacteriophage dynamics during fecal microbial transplantation in subjects with metabolic syndrome
Cited by: 17
Author(s): Pilar Manrique, Yifan Zhu, John van der Oost, Hilde Herrema, Max Nieuwdorp, Willem M. de Vos, Mark Young
Software Mentions: 2
Published: over 5 years ago
10.1080/19490976.2021.1926840
The gut microbiome of COVID-19 recovered patients returns to uninfected status in a minority-dominated United States cohort
Cited by: 38
Author(s): Rachel C. Newsome, Josée Gauthier, María Celeste Hernández, George Abraham, Tanya O. Robinson, Hibbard E. Williams, Meredith Sloan, Anna H. Owings, Hannah Laird, Christian Taube, Yilianys Pride, Kenneth J. Wilson, Mohammad S Hasan, Adam Parker, Michal Senitko, Sarah C. Glover, Raad Z. Gharaibeh, Christian Jobin
Software Mentions: 2
Published: over 5 years ago
10.1080/19490976.2021.1953247
Distinct gut microbial compositional and functional changes associated with impaired inhibitory control in patients with cirrhosis
Cited by: 11
Author(s): Jasmohan S. Bajaj, Amirhossein Shamsaddini, Andrew Fagan, Sara McGeorge, Edith Gavis, Masoumeh Sikaroodi, Lisa A. Brenner, James B. Wade, Patrick M. Gillevet
Software Mentions: 2
Published: over 5 years ago
10.1080/19490976.2021.1957536
A double-blind, 377-subject randomized study identifies <i>Ruminococcus, Coprococcus, Christensenella</i>, and <i>Collinsella</i> as long-term potential key players in the modulation of the gut microbiome of lactose intolerant individuals by galacto-oligosaccharides
Cited by: 11
Author(s): M. Andrea Azcárate-Peril, Jeffrey Roach, Alan J. Marsh, William D. Chey, William J. Sandborn, Andrew J. Ritter, Dennis Savaiano, Todd R. Klaenhammer
Software Mentions: 2
Published: over 5 years ago
10.1186/s13099-021-00403-x
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Cited by: 20
Author(s): Virinder Sarhadi, Binu Mathew, Arto Kokkola, Tiina Karla, Milja Tikkanen, Hilpi Rautelin, Leo Lahti, Pauli Puolakkainen, Sakari Knuutila
Software Mentions: 2
Published: over 5 years ago
10.1016/j.heliyon.2019.e02003
Anuran tadpoles inhabiting a fluoride-rich stream: diets and morphological indicators
Cited by: 5
Author(s): Favio E. Pollo, Luciana Cibils‐Martina, Manuel A. Otero, Mariana Baraquet, Pablo Raúl Grenat, Nancy Edith Salas, Adolfo Ludovico Martino
Software Mentions: 2
Published: about 7 years ago
10.1186/s41065-017-0034-4
A comparative genomics approach revealed evolutionary dynamics of microsatellite imperfection and conservation in genus Gossypium
Cited by: 3
Author(s): Muhammad Mahmood Ahmed, Chao Shen, Anam Qadir Khan, Muhammad Atif Wahid, Muhammad Shaban, Zhongxu Lin
Software Mentions: 2
Published: over 9 years ago
10.1080/08912963.2017.1341503
Eocene sand tiger sharks (Lamniformes, Odontaspididae) from the Bolca Konservat-Lagerstätte, Italy: palaeobiology, palaeobiogeography and evolutionary significance
Cited by: 13
Author(s): Giuseppe Marramà, Andrea Engelbrecht, Giorgio Carnevale, Jürgen Kriwet
Software Mentions: 2
Published: about 9 years ago
10.1177/0959683618788651
Molluscan benthic communities at Brijuni Islands (northern Adriatic Sea) shaped by Holocene sea-level rise and recent human eutrophication and pollution
Cited by: 9
Author(s): Sara-Maria Schnedl, Alexandra Haselmair, Ivo Gallmetzer, Anna-Katharina Mautner, Adam Tomášových, Martin Zuschin
Software Mentions: 2
Published: about 8 years ago
10.1186/s43008-020-00045-9
Naming the untouchable – environmental sequences and niche partitioning as taxonomical evidence in fungi
Cited by: 14
Author(s): Faheema Kalsoom Khan, Kerri L. Kluting, Jeanette Tångrot, Héctor Urbina, Tea Ammunét, Shadi Eshghi Sahraei, Martin Rydén, Martin Ryberg, Anna Rosling
Software Mentions: 2
Published: almost 6 years ago
10.1093/geroni/igaa057.3076
Associations of Dietary Patterns With the Gut Microbiota in Older, Community-Dwelling Men
Cited by: 0
Author(s): James Shikany, Ryan T. Demmer, Abigail Johnson, Katie A. Meyer, Kristine E. Ensrud, Eric S. Orwoll, Deborah M. Kado, Lisa Langsetmo
Software Mentions: 2
Published: over 5 years ago
10.3390/insects8030064
Monitoring Effect of Fire on Ant Assemblages in Brazilian Rupestrian Grasslands: Contrasting Effects on Ground and Arboreal Fauna
Cited by: 13
Author(s): Diego V. Anjos, Ricardo I. Campos, Renata Bernardes Faria Campos, Sérvio Pontes Ribeiro
Software Mentions: 2
Published: about 9 years ago
10.3390/insects9040188
Hibernation Leads to Altered Gut Communities in Bumblebee Queens (Bombus terrestris)
Cited by: 13
Author(s): Lien Bosmans, María I. Pozo, Christel Verreth, Sam Crauwels, Félix Wäckers, Hans Jacquemyn, Bart Lievens
Software Mentions: 2
Published: over 7 years ago
10.3390/insects10080248
High-Resolution Profiling of Gut Bacterial Communities in an Invasive Beetle using PacBio SMRT Sequencing System
Cited by: 8
Author(s): Letian Xu, Liuwei Sun, Shihan Zhang, Shanshan Wang, Min Lü
Software Mentions: 2
Published: about 7 years ago
10.3390/insects10110377
Cryptic Species Discrimination in Western Pine Beetle, Dendroctonus brevicomis LeConte (Curculionidae: Scolytinae), Based on Morphological Characters and Geometric Morphometrics
Cited by: 7
Author(s): Osiris Valerio-Mendoza, Jazmín García-Román, Moises Becerril, Francisco Armendáriz-Toledano, Gerardo Cuéllar-Rodríguez, José F. Negrón, Brian Sullivan, Gerardo Zúñiga
Software Mentions: 2
Published: almost 7 years ago
10.3390/insects11020136
Low Host Specialization in the Cuckoo Wasp, Parnopes grandior, Weakens Chemical Mimicry but Does Not Lead to Local Adaption
Cited by: 5
Author(s): Carlo Polidori, Yolanda Ballesteros, Mareike Wurdack, Josep Daniel Asís, José Tormos, Laura Baños‐Picón, Thomas Schmitt
Software Mentions: 2
Published: over 6 years ago
10.3390/insects11020134
First Insight into Microbiome Profiles of Myrmecophilous Beetles and Their Host, Red Wood Ant Formica polyctena (Hymenoptera: Formicidae)—A Case Study
Cited by: 9
Author(s): Agnieszka Kaczmarczyk‐Ziemba, Mirosław Zagaja, Grzegorz K. Wagner, Ewa Pietrykowska‐Tudruj, Bernard Staniec
Software Mentions: 2
Published: over 6 years ago
10.3390/insects11070439
Impact of Sacbrood Virus on Larval Microbiome of Apis mellifera and Apis cerana
Cited by: 5
Author(s): Rujipas Yongsawas, Veeranan Chaimanee, Jeffery S. Pettis, Humberto Boncristiani, Dawn Lopez, Ammarin In-On, Panuwan Chantawannakul, Terd Disayathanoowat
Software Mentions: 2
Published: about 6 years ago
10.3390/insects11080499
Diverse Diets with Consistent Core Microbiome in Wild Bee Pollen Provisions
Cited by: 13
Author(s): Rebecca M. Dew, Quinn S. McFrederick, Sandra M. Rehan
Software Mentions: 2
Published: about 6 years ago
10.3390/insects12050409
Effects of Multi-Component Backgrounds of Volatile Plant Compounds on Moth Pheromone Perception
Cited by: 2
Author(s): Lucie Conchou, Philippe Lucas, Nina Deisig, Elodie Demondion, Michel Renou
Software Mentions: 2
Published: over 5 years ago
10.3390/insects12050426
The Diversity and Dynamics of Fungi in Dryocosmus kuriphilus Community
Cited by: 2
Author(s): Xiaohui Yang, Xiangmei Li, Dao‐Hong Zhu, Yang Zeng, Lvquan Zhao
Software Mentions: 2
Published: over 5 years ago
10.3390/insects12060525
Impact of Nosema Disease and American Foulbrood on Gut Bacterial Communities of Honeybees Apis mellifera
Cited by: 9
Author(s): Poonnawat Panjad, Rujipas Yongsawas, Chainarong Sinpoo, Chonthicha Pakwan, Phakamas Subta, Sasiprapa Krongdang, Ammarin In-On, Siriwadee Chomdej, Panuwan Chantawannakul, Terd Disayathanoowat
Software Mentions: 2
Published: about 5 years ago
10.3390/insects12070575
Environment and Diet Influence the Bacterial Microbiome of Ambigolimax valentianus, an Invasive Slug in California
Cited by: 4
Author(s): D. Grant Jackson, Mia R. Maltz, Hannah L Freund, James Borneman, Emma L. Aronson
Software Mentions: 2
Published: about 5 years ago
10.3390/insects12090775
Ephemeroptera (Mayflies) Assemblages and Environmental Variation along Three Streams Located in the Dry-Hot Valleys of Baima Snow Mountain, Yunnan, Southwest China
Cited by: 3
Author(s): Muhammad Farooq, Xianfu Li, Lu Tan, Davide Fornacca, Yanpeng Li, Nima Cili, Zhengkun Tian, Lu Yang, Xiaoling Deng, Shuoran Liu, Wen Xiao
Software Mentions: 2
Published: about 5 years ago
10.3390/insects12090814
Hermetia illucens (L.) (Diptera: Stratiomyidae) Odorant Binding Proteins and Their Interactions with Selected Volatile Organic Compounds: An In Silico Approach
Cited by: 24
Author(s): Carmen Scieuzo, Marisa Nardiello, Donatella Farina, Andrea Scala, Jonathan A. Cammack, Jeffery K. Tomberlin, Heiko Vogel, Rosanna Salvia, Krishna Persaud, Patrizia Falabella
Software Mentions: 2
Published: almost 5 years ago
10.1007/s10841-019-00215-0
Effects of vineyard inter-row management on the diversity and abundance of plants and surface-dwelling invertebrates in Central Romania
Cited by: 16
Author(s): Cristina Fiera, Werner Ulrich, Daniela Popescu, Claudiu Ioan Bunea, Minodora Manu, Ioana Nae, Melania Stan, Bálint Markó, István Urák, Andrei Giurginca, Nicole Penke, Silvia Winter, Sophie Kratschmer, Jacob Buchholz, Pascal Querner, Johann G. Zaller
Software Mentions: 2
Published: over 6 years ago
10.1111/jbg.12427
Identification of rumen microbial biomarkers linked to methane emission in Holstein dairy cows
Cited by: 45
Author(s): Yuliaxis Ramayo-Caldas, Laura M. Zingaretti, Milka Popova, Jordi Estellé, Aurélien Bernard, Nicolas Pons, Pau Bellot, Núria Mach, Andrea Rau, Hugo Roume, Miguel Pérez‐Enciso, Philippe Faverdin, Nadège Edouard, Dusko Ehrlich, Diego P. Morgavi, Gilles Renand
Software Mentions: 2
Published: about 7 years ago
10.1111/1365-2656.12725
Strategies for managing rival bacterial communities: Lessons from burying beetles
Cited by: 50
Author(s): Ana Duarte, Martin Welch, Chris Swannack, Josef Wagner, Rebecca M. Kilner
Software Mentions: 2
Published: about 9 years ago
10.1128/JB.00478-18
Cystic Fibrosis-Associated Stenotrophomonas maltophilia Strain-Specific Adaptations and Responses to pH
Cited by: 9
Author(s): Tara Gallagher, Joann Phan, Andrew Oliver, Alexander B. Chase, Whitney England, Stephen Wandro, Clark Hendrickson, Stefan Riedel, Katrine Whiteson
Software Mentions: 2
Published: over 7 years ago
10.7150/jca.54221
Alterations of bacterial communities of vocal cord mucous membrane increases the risk for glottic laryngeal squamous cell carcinoma
Cited by: 6
Author(s): Zhen Dong, Chunming Zhang, Qinli Zhao, Hongxiang Hui, Xuting Xue, Shuxin Wen, Yongyan Wu, Wei Gao, Binquan Wang
Software Mentions: 2
Published: over 5 years ago
10.1007/s10886-020-01156-8
Soil Inoculation Alters Leaf Metabolic Profiles in Genetically Identical Plants
Cited by: 4
Author(s): Martine Huberty, Beverly Martis, Jorian van Kampen, Young Hae Choi, Klaas Vrieling, Peter G. L. Klinkhamer, T. Martijn Bezemer
Software Mentions: 2
Published: over 6 years ago
10.3164/jcbn.18-105
Dietary supplementation with partially hydrolyzed guar gum helps improve constipation and gut dysbiosis symptoms and behavioral irritability in children with autism spectrum disorder
Cited by: 42
Author(s): Ryo Inoüe, Yuko Sakaue, Yuki Kawada, Ryuji Tamaki, Zenta Yasukawa, Makoto Ozeki, Satoko Ueba, Chihiro Sawai, Kazuo Nonomura, Takamitsu Tsukahara, Yuji Naito
Software Mentions: 2
Published: over 7 years ago
10.3164/jcbn.19-22
Analysis of gut microbiota in patients with cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL)
Cited by: 7
Author(s): Jun Matsuura, Ryo Inoüe, Tomohisa Takagi, Satoshi Wada, Akiko Watanabe, Takashi Koizumi, Makiko Mukai, Ikuko Mizuta, Yuji Naito, Toshiki Mizuno
Software Mentions: 2
Published: over 7 years ago
10.3390/jcm8020230
The Relationship between Platelet Count and Host Gut Microbiota: A Population-Based Retrospective Cross-Sectional Study
Cited by: 6
Author(s): Hee‐Young Yoon, Hanna Kim, Su Hwan Lee, Soo Jung Kim, Yoosoo Chang, Seungho Ryu, Hocheol Shin, Hyung-Lae Kim, Jin Hwa Lee
Software Mentions: 2
Published: over 7 years ago
10.1038/srep11124
Manipulating the banana rhizosphere microbiome for biological control of Panama disease
Cited by: 118
Author(s): Cong Xue, C. Ryan Penton, Zongzhuan Shen, Ruifu Zhang, Qiwei Huang, Rong Li, Yunze Ruan, Qirong Shen
Software Mentions: 2
Published: about 11 years ago
10.1038/srep13338
Effect of ethnicity and socioeconomic variation to the gut microbiota composition among pre-adolescent in Malaysia
Cited by: 55
Author(s): Chun Wie Chong, A. Ahmad, Yvonne Ai Lian Lim, Cindy Shuan Ju Teh, Ivan Kok Seng Yap, Soo Ching Lee, Yuee Teng Chin, P’ng Loke, Kek Heng Chua
Software Mentions: 2
Published: about 11 years ago
10.1038/srep14862
Habitat fragmentation is associated to gut microbiota diversity of an endangered primate: implications for conservation
Cited by: 141
Author(s): Claudia Barelli, Davide Albanese, Claudio Donati, Massimo Pindo, Chiara Dallago, Francesco Rovero, Duccio Cavalieri, Kieran Tuohy, Heidi C. Hauffe, Carlotta De Filippo
Software Mentions: 2
Published: almost 11 years ago
10.1038/srep18206
The impact of rearing environment on the development of gut microbiota in tilapia larvae
Cited by: 194
Author(s): Christos Giatsis, Detmer Sipkema, Hauke Smidt, Hans G.H.J. Heilig, Giulia Benvenuti, J.A.J. Verreth, Marc Verdegem
Software Mentions: 2
Published: over 10 years ago
10.1038/srep18787
The nature of Ordovician limestone-marl alternations in the Oslo-Asker District (Norway): witnesses of primary glacio-eustasy or diagenetic rhythms?
Cited by: 23
Author(s): Chloé E. A. Amberg, Tim Collart, Wout Salenbien, Lisa M. Egger, Axel Munnecke, Arne Thorshøj Nielsen, Claude Monnet, Øyvind Hammer, Thijs R.A. Vandenbroucke
Software Mentions: 2
Published: over 10 years ago
10.1038/srep23027
Discovery of a Novel Seminal Fluid Microbiome and Influence of Estrogen Receptor Alpha Genetic Status
Cited by: 56
Author(s): Angela B. Javurek, William G. Spollen, Amber M. Mann Ali, Sarah A. Johnson, Dennis B. Lubahn, Nathan J. Bivens, Karen Bromert, Mark R. Ellersieck, Scott A. Givan, Cheryl S. Rosenfeld
Software Mentions: 2
Published: over 10 years ago
10.1038/srep25945
Gut microbiota composition and Clostridium difficile infection in hospitalized elderly individuals: a metagenomic study
Cited by: 173
Author(s): Christian Milani, Andrea Ticinesi, J. Gerritsen, Antonio Nouvenne, Gabriele Andrea Lugli, Leonardo Mancabelli, Francesca Turroni, Sabrina Duranti, Marta Mangifesta, Alice Viappiani, Chiara Ferrario, Marcello Maggio, Fulvio Lauretani, Willem M. de Vos, Douwe van Sinderen, Tiziana Meschi, Marco Ventura
Software Mentions: 2
Published: over 10 years ago
10.1038/srep26513
Elevational sensitivity in an Asian ‘hotspot’: moth diversity across elevational gradients in tropical, sub-tropical and sub-alpine China
Cited by: 8
Author(s): Louise A. Ashton, Akihiro Nakamura, Chris J. Burwell, Yong Tang, Min Cao, T. Whitaker, Zhenhua Sun, Han Huang, R. L. Kitching
Software Mentions: 2
Published: over 10 years ago
10.1038/srep28904
Dynamics of dental evolution in ornithopod dinosaurs
Cited by: 17
Author(s): Edward Strickson, Albert Prieto‐Márquez, Michael J. Benton, Thomas L. Stubbs
Software Mentions: 2
Published: about 10 years ago
10.1038/srep30930
Extremely heat tolerant photo-symbiosis in a shallow marine benthic foraminifera
Cited by: 32
Author(s): Christiane Schmidt, Danna Titelboim, J. Brandt, Barak Herut, Sigal Abramovich, Ahuva Almogi‐Labin, Michal Kučera
Software Mentions: 2
Published: about 10 years ago
10.1038/srep31519
Common methods for fecal sample storage in field studies yield consistent signatures of individual identity in microbiome sequencing data
Cited by: 56
Author(s): Ran Blekhman, Karen Tang, Elizabeth A. Archie, Luis B. Barreiro, Zachary P. Johnson, Mark Wilson, Jaden R. Kohn, Michael L. Yuan, Laurence R. Gesquiere, Laura Grieneisen, Jenny Tung
Software Mentions: 2
Published: about 10 years ago
10.1038/srep30607
Climate extremes can drive biological assemblages to early successional stages compared to several mild disturbances
Cited by: 19
Author(s): Carlos Sanz‐Lázaro
Software Mentions: 2
Published: about 10 years ago
10.1038/srep31447
Simulated leakage of high pCO2 water negatively impacts bivalve dominated infaunal communities from the Western Baltic Sea
Cited by: 21
Author(s): Hanna Schade, Lisa Mevenkamp, Katja Guilini, Stefanie Meyer, Stanislav N. Gorb, Doris Abele, Alexandra Vanreusel, Frank Melzner
Software Mentions: 2
Published: about 10 years ago
10.1038/srep32411
Bacterial community structure and function shift across a northern boreal forest fire chronosequence
Cited by: 33
Author(s): Hui Sun, Minna Santalahti, Jukka Pumpanen, Egle Köster, Frank Berninger, Tommaso Raffaello, Fred O. Asiegbu, Jussi Heinonsalo
Software Mentions: 2
Published: almost 10 years ago
10.1038/srep35882
The human laryngeal microbiome: effects of cigarette smoke and reflux
Cited by: 34
Author(s): Marie E. Jetté, Kimberly A. Dill‐McFarland, Alissa S. Hanshew, Garret Suen, Susan L. Thibeault
Software Mentions: 2
Published: almost 10 years ago
10.1038/srep36271
Coral symbioses under prolonged environmental change: living near tolerance range limits
Cited by: 39
Author(s): Eugenia M. Sampayo, Tyrone Ridgway, Lorenzo Franceschinis, George Roff, Ove Høegh-Guldberg, Sophie Dove
Software Mentions: 2
Published: almost 10 years ago
10.1038/srep36260
27 years of benthic and coral community dynamics on turbid, highly urbanised reefs off Singapore
Cited by: 101
Author(s): James R. Guest, Karenne Tun, Jeffrey Low, Adriana Vergés, Ezequiel M. Marzinelli, Alexandra H. Campbell, Andrew G. Bauman, David A. Feary, Loke Ming Chou, Peter D. Steinberg
Software Mentions: 2
Published: almost 10 years ago
10.1038/srep36672
Tree species, tree genotypes and tree genotypic diversity levels affect microbe-mediated soil ecosystem functions in a subtropical forest
Cited by: 23
Author(s): Witoon Purahong, Walter Durka, Markus Fischer, Sven Dommert, Ricardo Schöps, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: almost 10 years ago
10.1038/srep40189
Diel-scale temporal dynamics recorded for bacterial groups in Namib Desert soil
Cited by: 34
Author(s): Eoin Gunnigle, Aline Frossard, Jean‐Baptiste Ramond, Leandro D. Guerrero, Mary Seely, Don A. Cowan
Software Mentions: 2
Published: over 9 years ago
10.1038/srep40864
Microbial succession in the gastrointestinal tract of dairy cows from 2 weeks to first lactation
Cited by: 124
Author(s): Kimberly A. Dill‐McFarland, Jacob D. Breaker, Garret Suen
Software Mentions: 2
Published: over 9 years ago
10.1038/srep40702
Wells provide a distorted view of life in the aquifer: implications for sampling, monitoring and assessment of groundwater ecosystems
Cited by: 63
Author(s): Kathryn Korbel, Anthony A. Chariton, Sarah Stephenson, Paul Greenfield, Grant C. Hose
Software Mentions: 2
Published: over 9 years ago
10.1038/srep41234
Paenibacillus polymyxa NSY50 suppresses Fusarium wilt in cucumbers by regulating the rhizospheric microbial community
Cited by: 50
Author(s): Lu Shi, Nanshan Du, Sheng Shu, Jian Sun, Shuzhan Li, Shirong Guo
Software Mentions: 2
Published: over 9 years ago
10.1038/srep43483
Effect of predatory bacteria on the gut bacterial microbiota in rats
Cited by: 51
Author(s): Kenneth Shatzkes, Chi Tang, Eric Singleton, Sean Shukla, Michael Zuena, Sudeep Gupta, Sonal Dharani, Joseph Rinaggio, Nancy Connell, Daniel E. Kadouri
Software Mentions: 2
Published: over 9 years ago
10.1038/srep44182
Stress during pregnancy alters temporal and spatial dynamics of the maternal and offspring microbiome in a sex-specific manner
Cited by: 156
Author(s): Eldin Jašarević, Christopher D. Howard, Ana M. Misic, Daniel P. Beiting, Tracy L. Bale
Software Mentions: 2
Published: over 9 years ago
10.1038/srep44382
Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar
Cited by: 134
Author(s): Amit K. Jaiswal, Y. Elad, Indira Paudel, Ellen R. Graber, Eddie Cytryn, Omer Frenkel
Software Mentions: 2
Published: over 9 years ago
10.1038/srep46297
Inorganic carbon physiology underpins macroalgal responses to elevated CO2
Cited by: 107
Author(s): Christopher E. Cornwall, Andrew T. Revill, Jason M. Hall‐Spencer, Marco Milazzo, John A. Raven, Catriona L. Hurd
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-00953-8
Responses of denitrifying bacterial communities to short-term waterlogging of soils
Cited by: 34
Author(s): Yong Wang, Yoshitaka Uchida, Yumi Shimomura, Hiroko Akiyama, Masahito Hayatsu
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-01359-2
Effect of spatio-temporal shifts in salinity combined with other environmental variables on the ecological processes provided by Zostera noltei meadows
Cited by: 13
Author(s): Ana I. Sousa, Ricardo Calado, Daniel F. R. Cleary, Cláudia Nunes, Manuel A. Coimbra, João Serôdio, Ana I. Lillebø
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-01212-6
Determination of nasal and oropharyngeal microbiomes in a multicenter population-based study – findings from Pretest 1 of the German National Cohort
Cited by: 15
Author(s): Manas K. Akmatov, Nadine Koch, Marius Vital, Wolfgang Ahrens, Dieter Flesch-Janys, Julia Fricke, Anja Gatzemeier, Halina Greiser, Kathrin Günther, Thomas Illig, Rudolf Kaaks, Bastian Krone, Andrea A. Kühn, Jakob Linseisen, Christine Meisinger, Karin B. Michels, Susanne Moebus, Alexandra Nieters, Nadia Obi, Anja Schultze, Julia Six-Merker, Dietmar H. Pieper, Frank Peßler
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-02258-2
Effects of replacing Leymus chinensis with whole-crop wheat hay on Holstein bull apparent digestibility, plasma parameters, rumen fermentation, and microbiota
Cited by: 19
Author(s): Wen-jing Niu, Yang He, Chuanqi Xia, Muhammad Aziz Rahman, Qinghua Qiu, Tao Shao, Yixun Liang, Linbao Ji, Haibo Wang, Binghai Cao
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-02363-2
Seasonal soil microbial responses are limited to changes in functionality at two Alpine forest sites differing in altitude and vegetation
Cited by: 63
Author(s): J.A. Siles, Rosa Margesin
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-03095-z
Comparison of the active and resident community of a coastal microbial mat
Cited by: 33
Author(s): Daniela Clara Cardoso, Anna Sandionigi, Mariana Silvia Cretoiu, Maurizio Casiraghi, Lucas J. Stal, Henk Bolhuis
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-017-03568-1
An Assessment of Mobile Predator Populations along Shallow and Mesophotic Depth Gradients in the Hawaiian Archipelago
Cited by: 21
Author(s): Jacob Asher, Ivor D. Williams, Euan S. Harvey
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-017-05241-z
Effects of suspended sediments on the sponge holobiont with implications for dredging management
Cited by: 36
Author(s): Mari Carmen Pineda, Brian Strehlow, Miriam Sternel, Alan Duckworth, Ross Jones, Nicole S. Webster
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-017-05485-9
Costly neighbours: Heterospecific competitive interactions increase metabolic rates in dominant species
Cited by: 13
Author(s): Matouš Janča, Lumı́r Gvoždı́k
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-017-06687-x
Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
Cited by: 43
Author(s): Vera G. Fonseca, Frédéric Sinniger, John Gaspar, Christopher Quince, Simon Creer, Deborah M. Power, Lloyd S. Peck
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-017-07425-z
High diversity and unique composition of gut microbiomes in pygmy (Kogia breviceps) and dwarf (K. sima) sperm whales
Cited by: 28
Author(s): Patrick M. Erwin, Ryan G. Rhodes, Kevin B. Kiser, Tiffany F. Keenan-Bateman, William A. McLellan, D. Ann Pabst
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-019-49096-y
Miltefosine treatment reduces visceral hypersensitivity in a rat model for irritable bowel syndrome via multiple mechanisms
Cited by: 13
Author(s): Sara Botschuijver, Sophie A. van Diest, Isabelle van Thiel, Rafael Simone Saia, Anne S. Strik, Zhumei Yu, Daniele Maria-Ferreira, Olaf Welting, Dániel Keszthelyi, Gary Jennings, Sigrid E. M. Heinsbroek, Ronald P.J. Oude Elferink, Frank Schuren, Wouter J. de Jonge, René M. van den Wijngaard
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-019-49220-y
Plumage iridescence is associated with distinct feather microbiota in a tropical passerine
Cited by: 5
Author(s): Veronika Javůrková, Erik D Enbody, Jakub Kreisinger, Kryštof Chmel, Jakub Mrázek, Jordan Karubian
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-49893-5
Remission in Crohn’s disease is accompanied by alterations in the gut microbiota and mucins production
Cited by: 28
Author(s): Daniéla Oliveira Magro, Andrey dos Santos, Dioze Guadagnini, Flavia Moreira de Godoy, Sylvia Helena Monteiro Silva, Wilson José Fernandes Lemos, Nicola Vitulo, Sandra Torriani, Lílian Vital Pinheiro, Carlos Augusto Real Martinez, Mário José Abdalla Saad, Cláudio Saddy Rodrigues Coy
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-49823-5
Benchmarking urine storage and collection conditions for evaluating the female urinary microbiome
Cited by: 23
Author(s): Carrie E. Jung, Jessica Chopyk, Ji Hyun Shin, Emily S. Lukacz, Linda Brubaker, Leila K. Schwanemann, Rob Knight, Alan J. Wolfe, David T. Pride
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-49832-4
Distinct responses from bacterial, archaeal and fungal streambed communities to severe hydrological disturbances
Cited by: 19
Author(s): Giulia Gionchetta, Anna M. Romaní, Francesc Oliva, Joan Artigas
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-49854-y
Conventional and organic soil management as divergent drivers of resident and active fractions of major soil food web constituents
Cited by: 46
Author(s): Paula Harkes, Afnan Khalil Ahmad Suleiman, S.J.J. van den Elsen, J.J. de Haan, M.H.M. Holterman, Eiko E. Kuramae, J. Helder
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-49555-6
Disentangling the environmental impact of different human disturbances: a case study on islands
Cited by: 16
Author(s): Sebastian Steibl, Christian Laforsch
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-50607-0
Ecotoxicological hazard of a mixture of glyphosate and aminomethylphosphonic acid to the mussel Mytilus galloprovincialis (Lamarck 1819)
Cited by: 26
Author(s): Valerio Matozzo, Marco Munari, Laura Masiero, Livio Finos, María Gabriella Marin
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-51291-w
Sexual and genotypic variation in terpene quantitative and qualitative profiles in the dioecious shrub Baccharis salicifolia
Cited by: 7
Author(s): Xoaquín Moreira, Luis Abdala‐Roberts, Colleen S. Nell, Carla Vázquez‐González, Jessica D. Pratt, Ken Keefover‐Ring, Kailen A. Mooney
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-50952-0
The capacity of wastewater treatment plants drives bacterial community structure and its assembly
Cited by: 22
Author(s): Young Kyung Kim, Keunje Yoo, Min Sung Kim, Il Ki Han, Minjoo Larry Lee, Bo Ram Kang, Tae Kwon Lee, Joonhong Park
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-51570-6
Bacterial, archaeal and micro-eukaryotic communities characterize a disease-suppressive or conducive soil and a cultivar resistant or susceptible to common scab
Cited by: 19
Author(s): Jan Kopecký, Zuzana Samkova, Ensyeh Sarikhani, Martina Kyselková, Marek Omelka, Václav Krištůfek, Jiří Diviš, G. L. Grundmann, Yvan Moënne‐Loccoz, Markéta Ságová-Marečková
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-51525-x
Hematopoietic Npc1 mutation shifts gut microbiota composition in Ldlr−/− mice on a high-fat, high-cholesterol diet
Cited by: 3
Author(s): Tom Houben, John Penders, Yvonne Oligschlaeger, Inês Magro dos Reis, Marc Jan Bonder, Debby P. Y. Koonen, Jingyuan Fu, Marten H. Hofker, Ronit Shiri-Sverdlov
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-51709-5
Competition structured a Late Cretaceous megaherbivorous dinosaur assemblage
Cited by: 26
Author(s): Jordan C. Mallon
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-53060-1
Limnological effects of a large Amazonian run-of-river dam on the main river and drowned tributary valleys
Cited by: 26
Author(s): Rafael M. Almeida, Stephen K. Hamilton, Emma J. Rosi‐Marshall, João Durval Arantes, Nathan Barros, Gina Boemer, Anderson Gripp, Vera L. M. Huszar, Pedro C. Junger, M. G. de Lima, F. Pacheco, Dirceu Tornavoi de Carvalho, Alexander J. Reisinger, Lúcia Helena Sampaio da Silva, Fábio Roland
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-53073-w
Microbial changes in relation to oral mucositis in autologous hematopoietic stem cell transplantation recipients
Cited by: 31
Author(s): Alexa M. G. A. Laheij, Judith E. Raber-Durlacher, Renée G. A. Koppelmans, Marie-Charlotte D.N.J.M. Huysmans, Carin Potting, Stephanie J. M. van Leeuwen, Mette D. Hazenberg, Michael T. Brennan, Inger von Bültzingslöwen, Jan‐Erik Johansson, J.J. de Soet, Thijs M. Haverman, Mark J. Buijs, Bernd W. Brandt, F.R. Rozema, Nicole M. A. Blijlevens, Egija Zaura
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-53769-z
Wild specimens of sand fly phlebotomine Lutzomyia evansi, vector of leishmaniasis, show high abundance of Methylobacterium and natural carriage of Wolbachia and Cardinium types in the midgut microbiome
Cited by: 16
Author(s): Rafael José Vivero, Marcela Villegas-Plazas, Gloria Cadavid-Restrepo, Claudia Ximena Moreno Herrera, Sandra Uribe, Howard Junca
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-019-54771-1
Effects of Long-term Cotton Continuous Cropping on Soil Microbiome
Cited by: 29
Author(s): Hui Xi, Jili Shen, Zhong Qu, Dingyi Yang, Shiming Liu, Xiaoqin Nie, Lu Zhu
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-55063-4
Land use change effects on diversity of soil bacterial, Acidobacterial and fungal communities in wetlands of the Sanjiang Plain, northeastern China
Cited by: 57
Author(s): Xin Sui, Rongtao Zhang, Beat Frey, Libin Yang, Mai‐He Li, Hongwei Ni
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-54869-6
Host phylogeny, diet, and habitat differentiate the gut microbiomes of Darwin’s finches on Santa Cruz Island
Cited by: 33
Author(s): Wesley T. Loo, Jefferson García-Loor, Rachael Y. Dudaniec, Sonia Kleindorfer, Colleen M. Cavanaugh
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-55290-9
Differences in the intestinal microbiome of healthy children and patients with newly diagnosed Crohn’s disease
Cited by: 84
Author(s): Kinga Kowalska-Duplaga, Tomasz Gosiewski, Przemysław Kapusta, Agnieszka Sroka-Oleksiak, Andrzej Wędrychowicz, Stanisław Pieczarkowski, Agnieszka H. Ludwig-Słomczyńska, Paweł Wołkow, Krzysztof Fyderek
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-55270-z
Phylogeographic patterns of intertidal arthropods (Acari, Oribatida) from southern Japanese islands reflect paleoclimatic events
Cited by: 8
Author(s): Tobias Pfingstl, Maximilian Wagner, Shimpei F. Hiruta, Stephan Koblmüller, Wataru Hagino, Satoshi Shimano
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-55720-8
Postmenopause as a key factor in the composition of the Endometrial Cancer Microbiome (ECbiome)
Cited by: 43
Author(s): Dana M. Walsh, Alexis N. Hokenstad, Jun Chen, Jaeyun Sung, Gregory D. Jenkins, Nicholas Chia, Heidi Nelson, Andrea Mariani, Marina Walther-Antonio
Software Mentions: 2
Published: over 6 years ago