Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: MareyMap

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/MareyMap

Estimation of Meiotic Recombination Rates Using Marey Maps
7 versions
Latest release: almost 4 years ago
234 downloads last month

Papers Mentioning MareyMap 17

Quantitative phenotyping of shell suture strength in walnut (Juglans regia L.) enhances precision for detection of QTL and genome-wide association mapping
Cited by: 19
Author(s): Gina M. Sideli, Annarita Marrano, Sara Montanari, Charles A. Leslie, Brian Allen, Hao Cheng, Patrick J. Brown, David B. Neale
Software Mentions: 8
Published: over 4 years ago

10.1002/pld3.285

Genetic and genomic resources to study natural variation in Brassica rapa
Cited by: 7
Author(s): Ping Lou, Scott Woody, Kathleen Greenham, Robert VanBuren, Marivi Colle, Patrick P. Edger, Ryan C. Sartor, Zheng Yining, Nathan Levendoski, Jan Lim, Calvin So, Brian Stoveken, Timothy Woody, Zhao Jian-jun, Shuxing Shen, Richard M. Amasino, C. Robertson McClung
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12864-017-3606-9

The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
Cited by: 268
Author(s): Ignazio Verde, Jerry Jenkins, Luca Dondini, Simona Micali, Giulia Pagliarani, Elisa Vendramin, Roberta Paris, Valeria Aramini, Laura Gazza, Laura Rossini, D. Bassi, Michela Troggio, Shengqiang Shu, Jane Grimwood, Stefano Tartarini, Maria Teresa Dettori, Jeremy Schmutz
Software Mentions: 3
Published: over 7 years ago

10.1534/g3.120.401728

High-Density Linkage Maps Based on Genotyping-by-Sequencing (GBS) Confirm a Chromosome-Level Genome Assembly and Reveal Variation in Recombination Rate for the Pacific OysterCrassostrea gigas
Cited by: 10
Author(s): Xiaoshen Yin, Alberto Arias‐Pérez, Tevfik Hamdi Kitapci, Dennis Hedgecock
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13059-016-0954-8

DNA methylation changes facilitated evolution of genes derived from Mutator-like transposable elements
Cited by: 13
Author(s): Jun Wang, Yeisoo Yu, Tao Feng, Jian Wei Zhang, Dario Copetti, Dave Kudrna, Jayson Talag, Seung‐Hee Lee, Rod A. Wing, Chuanzhu Fan
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0188682

Genome-wide recombination rate variation in a recombination map of cotton
Cited by: 21
Author(s): Chao Shen, Ximei Li, Ruiting Zhang, Zhenhua Lin
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-021-92601-5

Chromosome anchoring in Senegalese sole (Solea senegalensis) reveals sex-associated markers and genome rearrangements in flatfish
Cited by: 11
Author(s): Israel Guerrero-Cózar, Jèssica Gómez‐Garrido, Concha Berbel, Juan F. Martínez-Blanch, Tyler Alioto, Manuel Gonzalo Claros, Pierre‐Alexandre Gagnaire, Manuel Manchado
Software Mentions: 2
Published: over 3 years ago

10.1534/g3.116.038497

A Dense Brown Trout (Salmo trutta) Linkage Map Reveals Recent Chromosomal Rearrangements in the Salmo Genus and the Impact of Selection on Linked Neutral Diversity
Cited by: 36
Author(s): Maëva Leitwein, Bruno Guinand, Juliette Pouzadoux, Érick Desmarais, Patrick Berrebi, Pierre‐Alexandre Gagnaire
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0248089

Genetic mapping and identification of a QTL determining tolerance to freezing stress in Fragaria vesca L.
Cited by: 2
Author(s): Jahn Davik, Robert Wilson, Relindis Ghai Njah, Paul E. Grini, Stephen K. Randall, Muath K. Alsheik, Daniel J. Sargent
Software Mentions: 2
Published: over 3 years ago

10.1534/g3.119.400504

Inferring the Genomic Landscape of Recombination Rate Variation in European Aspen (Populus tremula)
Cited by: 20
Author(s): Rami-Petteri Apuli, Carolina Bernhardsson, Bastian Schiffthaler, Kathryn M. Robinson, Stefan Jansson, Nathaniel R. Street, Pär K. Ingvarsson
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41438-021-00605-z

High-density linkage map construction and identification of loci regulating fruit quality traits in blueberry
Cited by: 10
Author(s): Molla F. Mengist, Hamed Bostan, Eric Young, Kristine Kay, Nicholas D. Gillitt, James R. Ballington, Colin D. Kay, Mário G. Ferruzzi, Hamid Ashrafi, Mary Ann Lila, Massimo Iorizzo
Software Mentions: 1
Published: over 3 years ago

10.1111/pbi.12504

A highly recombined, high-density, eight-founder wheat MAGIC map reveals extensive segregation distortion and genomic locations of introgression segments
Cited by: 75
Author(s): Keith A. Gardner, Lukas M. Wittern, Ian Mackay
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pntd.0002652

Assembly of the Genome of the Disease Vector Aedes aegypti onto a Genetic Linkage Map Allows Mapping of Genes Affecting Disease Transmission
Cited by: 44
Author(s): Punita Juneja, Jewelna Osei-Poku, Yung Shwen Ho, Cristina V. Ariani, William J. Palmer, Arnab Pain, Francis M. Jiggins
Software Mentions: 1
Published: almost 11 years ago

10.1186/s13007-020-00665-7

GenoTypeMapper: graphical genotyping on genetic and sequence-based maps
Cited by: 3
Author(s): Mathieu Deblieck, Andrii Fatiukha, Norbert Grundman, Lianne Merchuk-Ovnat, Yehoshua Saranga, Tamar Krugman, Klaus Pillen, Albrecht Serfling, Wojciech Makałowski, Frank Ordon, Dragan Perović
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0036347

Integration of Two Diploid Potato Linkage Maps with the Potato Genome Sequence
Cited by: 201
Author(s): Kimberly J. Felcher, Joseph Coombs, Alicia N. Massa, Candice N. Hansey, John Hamilton, Richard E. Veilleux, C. Robin Buell, David S. Douches
Software Mentions: 1
Published: over 12 years ago

10.1186/s12864-017-4103-x

Genome-wide characterization of non-reference transposable element insertion polymorphisms reveals genetic diversity in tropical and temperate maize
Cited by: 17
Author(s): Xianjun Lai, James C. Schnable, Zhengqiao Liao, Jie Xu, Gengyun Zhang, Chuan Li, Erliang Hu, Rong Tang, Yunbi Xu, Yanli Lu
Software Mentions: 1
Published: about 7 years ago

10.3389/fgene.2021.596749

Identify of Fast-Growing Related Genes Especially in Height Growth by Combining QTL Analysis and Transcriptome in Salix matsudana (Koidz)
Cited by: 4
Author(s): Guoyuan Liu, Qingshan Yang, Junfeng Gao, Yuwei Wu, Zhicong Feng, Jingke Huang, Hang Zou, Xingzhao Zhu, Yanhong Chen, Chunmei Yu, Bolin Lian, Fei Zhong, Jian Zhang
Software Mentions: 1
Published: over 3 years ago