cran: MESS | Projects | Ecosyste.ms: Papers

10.3389/fpls.2017.00623

A Practical Guide to Visualization and Statistical Analysis of R. solanacearum Infection Data Using R
Cited by: 25
Author(s): Niklas Schandry
Software Mentions: 21
Published: over 7 years ago

Acacia dealbata invasion in Chile: Surprises from climatic niche and species distribution models
Cited by: 12
Author(s): Bárbara Langdon, Aníbal Pauchard, Ramiro O. Bustamante
Software Mentions: 12
Published: about 5 years ago

10.3389/fmicb.2020.545419

Species Dependence of SYTO 9 Staining of Bacteria
Cited by: 20
Author(s): Cushla McGoverin, Julia Robertson, Yaqub Jonmohamadi, Simon Swift, Frédérique Vanholsbeeck
Software Mentions: 10
Published: about 4 years ago

10.1371/journal.pmed.1002686

Deep learning for chest radiograph diagnosis: A retrospective comparison of the CheXNeXt algorithm to practicing radiologists
Cited by: 755
Author(s): Pranav Rajpurkar, Jeremy Irvin, Robyn L. Ball, Kaylie Zhu, Brandon Yang, Hershel Mehta, Tony Duan, Daisy Yi Ding, Aarti Bagul, Curtis P. Langlotz, Bhavik N. Patel, Kristen W. Yeom, Katie Shpanskaya, Francis G. Blankenberg, Jayne Seekins, Timothy J. Amrhein, David A. Mong, Safwan Halabi, Evan J. Zucker, Andrew Y. Ng, Matthew P. Lungren
Software Mentions: 9
Published: almost 6 years ago

10.1371/journal.pone.0128391

Optimizing the Protection of Cattle against Escherichia coli O157:H7 Colonization through Immunization with Different Combinations of H7 Flagellin, Tir, Intimin-531 or EspA
Cited by: 27
Author(s): Tom N. McNeilly, Mairi C. Mitchell, Alexander Corbishley, Mintu Nath, Hannah Simmonds, Sean P. McAteer, Aditya Mahajan, J. C. Low, David George Emslie Smith, John F. Huntley, David L. Gally
Software Mentions: 7
Published: over 9 years ago

10.1038/s41598-019-42974-5

Modeling the potential range expansion of larger grain borer, Prostephanus truncatus (Coleoptera: Bostrichidae)
Cited by: 28
Author(s): Frank H. Arthur, William R. Morrison, Amy C. Morey
Software Mentions: 5
Published: over 5 years ago

10.1186/s12859-020-03661-9

METROID: an automated method for robust quantification of subcellular fluorescence events at low SNR
Cited by: 0
Author(s): Marcelo Zoccoler, Pedro Xavier de Oliveira
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pone.0213820

Impacts of climate change on high priority fruit fly species in Australia
Cited by: 20
Author(s): Sabira Sultana, John B. Baumgartner, Bernard C. Dominiak, Jane E Royer, Linda J. Beaumont
Software Mentions: 5
Published: over 4 years ago

10.1186/s13071-020-04336-3

High-resolution habitat suitability model for Phlebotomus pedifer, the vector of cutaneous leishmaniasis in southwestern Ethiopia
Cited by: 2
Author(s): Myrthe Pareyn, Anneleen Rutten, Behailu Merdekios, Ronja E. M. Wedegärtner, Nigatu Girma, Leo Regelbrugge, Simon Shibru, Herwig Leirs
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0192947

Modulation of the peripheral blood transcriptome by the ingestion of probiotic yoghurt and acidified milk in healthy, young men
Cited by: 26
Author(s): Kathryn Burton, Grégory Pimentel, Nadine Zangger, Nathalie Vionnet, Jocelyne Drai, P. G. McTernan, François P. Pralong, Mauro Delorenzi, Guy Vergères
Software Mentions: 4
Published: over 6 years ago

10.1186/s40942-020-00209-0

Topographic analysis of macular choriocapillaris flow deficits in diabetic retinopathy using swept–source optical coherence tomography angiography
Cited by: 17
Author(s): Isaac Gendelman, A. Yasin Alibhai, Eric M. Moult, Emily S. Levine, Phillip X. Braun, Nihaal Mehta, Yi Zhao, Akihiro Ishibazawa, Osama Sorour, Caroline R. Baumal, André J. Witkin, Elias Reichel, James G. Fujimoto, Jay S. Duker, Nadia K. Waheed
Software Mentions: 3
Published: over 4 years ago

10.1002/ece3.5424

Modeling current and potential distributions of mammal species using presence‐only data: A case study on British deer
Cited by: 18
Author(s): Simon Croft, Alastair I. Ward, James Aegerter, Graham C. Smith
Software Mentions: 3
Published: about 5 years ago

10.1186/s13075-017-1273-5

Varying the item format improved the range of measurement in patient-reported outcome measures assessing physical function
Cited by: 11
Author(s): Gregor Liegl, Barbara Gandek, Felix Fischer, Jakob Bue Bjørner, John E. Ware, Matthias Rose, James F. Fries, Sandra Nolte
Software Mentions: 3
Published: over 7 years ago

10.1089/can.2019.0047

Sex and Strain Variation in Initial Sensitivity and Rapid Tolerance to Δ9–Tetrahydrocannabinol
Cited by: 14
Author(s): Cory Parks, Byron C. Jones, Bob M. Moore, Megan K. Mulligan
Software Mentions: 3
Published: about 4 years ago

10.3389/fimmu.2021.695972

Severe COVID-19 Is Characterized by an Impaired Type I Interferon Response and Elevated Levels of Arginase Producing Granulocytic Myeloid Derived Suppressor Cells
Cited by: 43
Author(s): Matthew J. Dean, Juan B. Ochoa, Maria Dulfary Sanchez-Pino, Jovanny Zabaleta, Jone Garai, Luis Del Valle, Dorota Wyczechowska, Lyndsey Buckner Baiamonte, Phaethon Philbrook, Rinku Majumder, Richard S. Vander Heide, Logan Dunkenberger, Ramesh P. Thylur, Bobby D. Nossaman, W. Mark Roberts, Andrew G. Chapple, Jiande Wu, Chindo Hicks, Jack Collins, Brian T. Luke, Randall C. Johnson, Hari K. Koul, Chris A. Rees, Claudia R. Morris, Julia Garcia‐Diaz, Augusto C. Ochoa
Software Mentions: 3
Published: about 3 years ago

10.7717/peerj.3104

Climate-change-induced range shifts of three allergenic ragweeds (AmbrosiaL.) in Europe and their potential impact on human health
Cited by: 43
Author(s): Karen Rasmussen, Jakob Thyrring, Robert Muscarella, Finn Borchsenius
Software Mentions: 3
Published: over 7 years ago

10.7717/peerj.11587

Light alters the impacts of nitrogen and foliar pathogens on the performance of early successional tree seedlings
Cited by: 4
Author(s): Alexander James Brown, Robert W. Heckman
Software Mentions: 3
Published: about 3 years ago

10.1002/ece3.2684

Climatic niche divergence and habitat suitability of eight alien invasive weeds in China under climate change
Cited by: 41
Author(s): Ji-Zhong Wan, Chun-Jing Wang, Jianwei Tan, Fei‐Hai Yu
Software Mentions: 3
Published: over 7 years ago

10.3390/ani9070458

Prediction of Tail Biting Events in Finisher Pigs from Automatically Recorded Sensor Data
Cited by: 19
Author(s): Mona Lilian Vestbjerg Larsen, Lene Juul Pedersen, Dan Børge Jensen
Software Mentions: 2
Published: about 5 years ago

10.1186/s40902-019-0196-2

Definition and management of odontogenic maxillary sinusitis
Cited by: 34
Author(s): Soung Min Kim
Software Mentions: 2
Published: over 5 years ago

10.3390/metabo8020026

GC-MS Based Metabolomics and NMR Spectroscopy Investigation of Food Intake Biomarkers for Milk and Cheese in Serum of Healthy Humans
Cited by: 36
Author(s): Alessia Trimigno, Linda H. Münger, Gianfranco Picone, Carola Freiburghaus, Grégory Pimentel, Nathalie Vionnet, François P. Pralong, Francesco Capozzi, René Badertscher, Guy Vergères
Software Mentions: 2
Published: over 6 years ago

10.3390/microorganisms9050924

Rapid Detection of Escherichia coli Antibiotic Susceptibility Using Live/Dead Spectrometry for Lytic Agents
Cited by: 8
Author(s): Julia Robertson, Cushla McGoverin, Joni Renee White, Frédérique Vanholsbeeck, Simon Swift
Software Mentions: 2
Published: over 3 years ago

10.1186/s13071-019-3744-9

Potential impact of climate change on the geographical distribution of two wild vectors of Chagas disease in Chile: Mepraia spinolai and Mepraia gajardoi
Cited by: 26
Author(s): Rubén Garrido, Antonella Bacigalupo, Francisco T. Peña-Gómez, Ramiro O. Bustamante, Pedro E. Cattan, David Eladio Gorla, Carezza Botto‐Mahan
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0194725

Extending the paleontology–biogeography reciprocity with SDMs: Exploring models and data in reducing fossil taxonomic uncertainty
Cited by: 9
Author(s): Anderson A. Eduardo, P. Martínez, Sidney F. Gouveia, Franciely da Silva Santos, Wilcilene Santos de Aragão, Jennifer Morales‐Barbero, Leonardo Kerber, Alexandre Liparini
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0210282

Red deer in Iberia: Molecular ecological studies in a southern refugium and inferences on European postglacial colonization history
Cited by: 26
Author(s): João Queirós, Pelayo Acevedo, João Santos, José A. Barasona, Beatriz Beltrán‐Beck, David González‐Barrio, José A. Armenteros, Iratxe Díez‐Delgado, Mariana Boadella, Isabel Fernández de Mera, Francisco Ruiz‐Fons, Joaquı́n Vicente, José de la Fuente, Christian Gortázar, Jeremy B. Searle, Paulo C. Alves
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0051472

Biotic Interactions in the Face of Climate Change: A Comparison of Three Modelling Approaches
Cited by: 23
Author(s): Anja Jaeschke, Torsten Bittner, Anke Jentsch, Björn Reineking, Helmut Schlumprecht, Carl Beierkuhnlein
Software Mentions: 2
Published: almost 12 years ago

10.1371/journal.pone.0121026

Snakes on the Balearic Islands: An Invasion Tale with Implications for Native Biodiversity Conservation
Cited by: 33
Author(s): Iolanda Silva‐Rocha, Daniele Salvi, Neftalí Sillero, José Antonio Mateo, Miguel Á. Carretero
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0164632

A Novel Class of Small Molecule Agonists with Preference for Human over Mouse TLR4 Activation
Cited by: 16
Author(s): Jason D. Marshall, Darren Heeke, Eileen Rao, Sean K. Maynard, David C. Hornigold, Christopher McCrae, Neil Fraser, Andrey Tovchigrechko, Li Yu, Nicola Williams, Sarah King, Martin Cooper, Adeline M. Hajjar, Jennifer Woo
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0060874

Climate Change and Range Expansion of the Asian Tiger Mosquito (Aedes albopictus) in Northeastern USA: Implications for Public Health Practitioners
Cited by: 272
Author(s): Ilia Rochlin, Dominick V. Ninivaggi, Michael L. Hutchinson, Ary Farajollahi
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.ppat.1009012

Effector prediction and characterization in the oomycete pathogen Bremia lactucae reveal host-recognized WY domain proteins that lack the canonical RXLR motif
Cited by: 26
Author(s): Kelsey Wood, Munir Nur, Juliana Gil, Kyle Fletcher, Kim Lakeman, Dasan Gann, Ayumi Gothberg, Tina Khuu, Jennifer Kopetzky, Sanye Naqvi, Archana Pandya, Chi Zhang, Brigitte Maisonneuve, Mathieu A. Pel, Richard W. Michelmore
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-019-44057-x

Role of pannexin-1 in the cellular uptake, release and hydrolysis of anandamide by T84 colon cancer cells
Cited by: 7
Author(s): Mireille Alhouayek, René Sorti, Jonathan Gilthorpe, Christopher J. Fowler
Software Mentions: 2
Published: over 5 years ago

10.1007/s00484-016-1188-x

Numerical ragweed pollen forecasts using different source maps: a comparison for France
Cited by: 20
Author(s): Katrin Zink, P. Kaufmann, Blaise Petitpierre, Olivier Broennimann, Antoine Guisan, Eros Gentilini, Mathias W. Rotach
Software Mentions: 2
Published: about 8 years ago

10.3390/s140202510

A Comprehensive Study of Data Collection Schemes Using Mobile Sinks in Wireless Sensor Networks
Cited by: 117
Author(s): Abdul Rahim Khan, Abdul Hanan Abdullah, Mohammad Hossein Anisi, Javed Iqbal Bangash
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0166142

Global Potential Distribution of Bactrocera carambolae and the Risks for Fruit Production in Brazil
Cited by: 18
Author(s): César Augusto Marchioro
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0131659

Evaluation of Limiting Climatic Factors and Simulation of a Climatically Suitable Habitat for Chinese Sea Buckthorn
Cited by: 29
Author(s): Guoqing Li, Sheng Du, Ke Guo
Software Mentions: 1
Published: about 9 years ago

10.1002/ece3.1859

Paleodistribution modeling suggests glacial refugia in Scandinavia and out‐of‐Tibet range expansion of the Arctic fox
Cited by: 8
Author(s): Marcelo Fuentes‐Hurtado, Anouschka R. Hof, Roland Jansson
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.4647

Is the future already here? The impact of climate change on the distribution of the eastern coral snake (Micrurus fulvius)
Cited by: 16
Author(s): Jennifer N. Archis, Christopher K. Akcali, Bryan L. Stuart, David W. Kikuchi, Amanda J. Chunco
Software Mentions: 1
Published: over 6 years ago

10.1111/ele.12158

The shaping of genetic variation in edge‐of‐range populations under past and future climate change
Cited by: 98
Author(s): Orly Razgour, Javier Juste, Carlos Ibáñez, Andreas Kiefer, Hugo Rebelo, Sébastien J. Puechmaille, Raphaël Arlettaz, Terry Burke, Deborah A. Dawson, Mark A. Beaumont, Gareth Jones
Software Mentions: 1
Published: about 11 years ago

10.1007/s10661-018-7137-x

Evaluating the applicability of MESS (matrix exponential spatial specification) model to assess water quality using GIS technique in agricultural mountain catchment (Western Carpathian)
Cited by: 4
Author(s): Wiktor Halecki, Tomasz Stachura, Wioletta Fudała, Maria Rusnak
Software Mentions: 1
Published: over 5 years ago

10.3390/foods9101498

Real-Time Monitoring of Volatile Compounds Losses in the Oven during Baking and Toasting of Gluten-Free Bread Doughs: A PTR-MS Evidence
Cited by: 10
Author(s): Joana Pico, Iuliia Khomenko, Vittorio Capozzi, Luciano Navarini, Franco Biasioli
Software Mentions: 1
Published: almost 4 years ago

10.3389/fnagi.2017.00256

The Effects of Home-Based Cognitive Training on Verbal Working Memory and Language Comprehension in Older Adulthood
Cited by: 33
Author(s): Brennan R. Payne, Elizabeth A. L. Stine‐Morrow
Software Mentions: 1
Published: about 7 years ago

10.1186/s13017-015-0025-6

Severe mutilating injuries with complex macroamputations of the upper extremity – is it worth the effort?
Cited by: 16
Author(s): Katrin Stanger, Raymund E. Horch, Adrian Dragu
Software Mentions: 1
Published: about 9 years ago

10.3390/molecules22122140

Theoretical Kinetic and Mechanistic Studies on the Reactions of CF3CBrCH2 (2-BTP) with OH and H Radicals
Cited by: 6
Author(s): Huiting Bian, Lili Ye, Jutang Sun
Software Mentions: 1
Published: almost 7 years ago

10.3402/meo.v21.32458

A meaningful MESS (Medical Education Scholarship Support)
Cited by: 4
Author(s): Shari A. Whicker, Deborah L. Engle, Saumil M. Chudgar, Stephen DeMeo, Sarah M. Bean, Aditee Narayan, Colleen O׳Connor Grochowski, Alisa Nagler
Software Mentions: 1
Published: over 8 years ago

10.1111/gcb.12577

Climate‐driven spatial mismatches between British orchards and their pollinators: increased risks of pollination deficits
Cited by: 55
Author(s): Chiara Polce, Michael P. D. Garratt, Mette Termansen, Julián Ramírez-Villegas, Andrew J. Challinor, Martin Lappage, N. D. Boatman, Andrew Crowe, Ayenew Melese Endalew, Simon G. Potts, Kate E. Somerwill, Jacobus C. Biesmeijer
Software Mentions: 1
Published: over 10 years ago

10.3390/insects11050298

Potential Distribution and the Risks of Bactericera cockerelli and Its Associated Plant Pathogen Candidatus Liberibacter Solanacearum for Global Potato Production
Cited by: 13
Author(s): Jing Wan, Rui Wang, Yonglin Ren, Simon McKirdy
Software Mentions: 1
Published: over 4 years ago

10.3390/insects12020092

Predicting the Distribution of the Invasive Species Leptocybe invasa: Combining MaxEnt and Geodetector Models
Cited by: 19
Author(s): Hua Zhang, Jinyue Song, Zhao Hong-yan, Ming Li, Wuhong Han
Software Mentions: 1
Published: over 3 years ago

10.1021/acs.jctc.0c00354

State-of-the-Art Quantum Chemistry Meets Variable Reaction Coordinate Transition State Theory to Solve the Puzzling Case of the H2S + Cl System
Cited by: 26
Author(s): Jacopo Lupi, Cristina Puzzarini, Carlo Cavallotti, Vincenzo Barone
Software Mentions: 1
Published: about 4 years ago

10.1021/acs.jpca.1c03168

Hierarchical Study of the Reactions of Hydrogen Atoms with Alkenes: A Theoretical Study of the Reactions of Hydrogen Atoms with C2–C4 Alkenes
Cited by: 5
Author(s): Jennifer Power, Kieran P. Somers, Shashank S. Nagaraja, Henry J. Curran
Software Mentions: 1
Published: over 3 years ago

10.1186/s12883-016-0729-6

Clinical predictors of seizure recurrence after the first post-ischemic stroke seizure
Cited by: 39
Author(s): Hyeon Jin Kim, Kee Duk Park, Kyoung Gyu Choi, Hyang Woon Lee
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12862-016-0663-7

Hierarchical genetic structure shaped by topography in a narrow-endemic montane grasshopper
Cited by: 37
Author(s): Víctor Noguerales, Pedro J. Cordero, Joaquín Ortego
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0099063

External Validation of a Prognostic Model for Seizure Recurrence Following a First Unprovoked Seizure and Implications for Driving
Cited by: 13
Author(s): Laura Bonnett, Anthony G Marson, Anthony L. Johnson, Lois Kim, Josemir W. Sander, Nicholas Lawn, Ettore Beghi, Maurizio Leone, Catrin Tudur Smith
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0166898

Seeing It All: Evaluating Supervised Machine Learning Methods for the Classification of Diverse Otariid Behaviours
Cited by: 26
Author(s): Monique Ladds, Adam P. Thompson, David J. Slip, David P. Hocking, Robert Harcourt
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0014670

Challenges in Identifying Sites Climatically Matched to the Native Ranges of Animal Invaders
Cited by: 122
Author(s): Gordon H. Rodda, Catherine S. Jarnevich, Robert N. Reed
Software Mentions: 1
Published: over 13 years ago

10.1038/s41598-019-50376-w

Digital soil mapping including additional point sampling in Posses ecosystem services pilot watershed, southeastern Brazil
Cited by: 18
Author(s): Bárbara Pereira Christófaro Silva, Marx Leandro Naves Silva, Fabio Arnaldo Pomar Avalos, Michele Duarte de Menezes, Nilton Curi
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-79267-1

Reproducing the Rift Valley fever virus mosquito-lamb-mosquito transmission cycle
Cited by: 13
Author(s): Paul J. Wichgers Schreur, Rianka P. M. Vloet, Jet Kant, Lucien van Keulen, José L. Gonzáles, Tessa M. Visser, Constantianus J. M. Koenraadt, Chantal B.F. Vogels, Jeroen Kortekaas
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0146543

Limitations to the Use of Species-Distribution Models for Environmental-Impact Assessments in the Amazon
Cited by: 30
Author(s): Lorena Ribeiro de A. Carneiro, Albertina P. Lima, Ricardo B. Machado, William E. Magnusson
Software Mentions: 1
Published: over 8 years ago

Projects: cran: MESS

Papers Mentioning MESS 57