Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: LncFinder

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/LncFinder

LncRNA Identification and Analysis Using Heterologous Features
4 versions
Latest release: about 3 years ago
212 downloads last month

Papers Mentioning LncFinder 9

10.3390/ijms21197271

LncLocation: Efficient Subcellular Location Prediction of Long Non-Coding RNA-Based Multi-Source Heterogeneous Feature Fusion
Cited by: 9
Author(s): Shiyao Feng, Ying Li, Wei Du, Wei Lv, Ying Li
Software Mentions: 6
Published: about 4 years ago

10.3390/plants9121794

Nanopore RNA Sequencing Revealed Long Non-Coding and LTR Retrotransposon-Related RNAs Expressed at Early Stages of Triticale SEED Development
Cited by: 15
Author(s): Ilya Kirov, Maxim Dudnikov, Pavel Merkulov, Andrey Shingaliev, Murad Omarov, Elizaveta Kolganova, Alexandra Sigaeva, Г. И. Карлов, A. A. Soloviev
Software Mentions: 5
Published: about 4 years ago

10.3390/genes11090981

PreLnc: An Accurate Tool for Predicting lncRNAs Based on Multiple Features
Cited by: 6
Author(s): Lei Cao, Yupeng Wang, Changwei Bi, Qiaolin Ye, Tongming Yin, Ning Ye
Software Mentions: 4
Published: over 4 years ago

10.1016/j.csbj.2020.11.030

The computational approaches of lncRNA identification based on coding potential: Status quo and challenges
Cited by: 22
Author(s): Jing Li, Xuan Zhang, Changning Liu
Software Mentions: 4
Published: almost 5 years ago

10.3390/ijms22168719

Advances in Computational Methodologies for Classification and Sub-Cellular Locality Prediction of Non-Coding RNAs
Cited by: 11
Author(s): Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Muhammad Imran Malik, Andreas Dengel, Sheraz Ahmed
Software Mentions: 3
Published: over 3 years ago

10.3389/fgene.2020.00090

NCResNet: Noncoding Ribonucleic Acid Prediction Based on a Deep Resident Network of Ribonucleic Acid Sequences
Cited by: 10
Author(s): Sen Yang, Yan Wang, Shuangquan Zhang, Xuemei Hu, Qin Ma, Yuan Tian
Software Mentions: 3
Published: almost 5 years ago

10.3390/ijms21155222

lncRNA_Mdeep: An Alignment-Free Predictor for Distinguishing Long Non-Coding RNAs from Protein-Coding Transcripts by Multimodal Deep Learning
Cited by: 11
Author(s): Xiao-Nan Fan, Shaowu Zhang, Song-Yao Zhang, Jinjie Ni
Software Mentions: 3
Published: over 4 years ago

10.3389/fgene.2021.607248

Computational Identification of miRNAs and Temperature-Responsive lncRNAs From Mango (Mangifera indica L.)
Cited by: 8
Author(s): Nann Miky Moh Moh, Peijing Zhang, Yujie Chen, Ming Chen
Software Mentions: 1
Published: over 3 years ago

10.3390/cells8060521

A Hybrid Prediction Method for Plant lncRNA-Protein Interaction
Cited by: 16
Author(s): Jael Sanyanda Wekesa, Yushi Luan, Ming Chen, Jun Meng
Software Mentions: 1
Published: over 5 years ago