Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: LOGICOIL
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/LOGICOIL
multi-state prediction of coiled-coil oligomeric
state
1 version
Latest release: over 10 years ago
0 downloads
Papers Mentioning LOGICOIL 15
10.1186/s12864-020-6534-z
Genome-wide discovery, and computational and transcriptional characterization of an AIG gene family in the freshwater snail Biomphalaria glabrata, a vector for Schistosoma mansoniCited by: 17
Author(s): Lijun Lu, Eric S. Loker, Si-Ming Zhang, Sarah Kay Buddenborg, Lijing Bu
Software Mentions: 8
Published: over 4 years ago
10.7554/eLife.46454
Combinations of Spok genes create multiple meiotic drivers in PodosporaCited by: 53
Author(s): Aaron A. Vogan, Sandra Lorena Ament‐Velásquez, Alexandra Granger-Farbos, Jesper Svedberg, Eric Bastiaans, A.J.M. Debets, Virginie Coustou, Hélène Yvanne, Corinne Clavé, Sven J. Saupe, Hanna Johannesson
Software Mentions: 6
Published: over 5 years ago
10.1016/j.jmb.2018.06.007
The FapF Amyloid Secretion Transporter Possesses an Atypical Asymmetric Coiled CoilCited by: 10
Author(s): Sarah L. Rouse, Fisentzos Stylianou, Howie Wu, Jamie-Lee Berry, Lee Sewell, Rhodri M. L. Morgan, Andrea C. Sauerwein, Steve Matthews
Software Mentions: 4
Published: about 6 years ago
10.1186/s12900-019-0102-2
Classification of the human THAP protein family identifies an evolutionarily conserved coiled coil regionCited by: 13
Author(s): Hiral M. Sanghavi, Sairam S. Mallajosyula, Sharmistha Majumdar
Software Mentions: 2
Published: over 5 years ago
10.7554/eLife.57241
The dimeric Golgi protein Gorab binds to Sas6 as a monomer to mediate centriole duplicationCited by: 5
Author(s): Agnieszka Fatalska, Emma Stepinac, Magdalena Richter, L. Kovács, Zbigniew Pietras, Martin Puchinger, Gang Dong, Michał Dadlez, David M. Glover
Software Mentions: 2
Published: over 3 years ago
10.1038/srep43318
ACCORD: an assessment tool to determine the orientation of homodimeric coiled-coilsCited by: 6
Author(s): Byeong Won Kim, Yang Ouk Jung, Min Kyung Kim, Do Hoon Kwon, Si Hoon Park, Jun Hoe Kim, Yong Boo Kuk, Sun Joo Oh, Leehyeon Kim, Bong Heon Kim, Woo Seok Yang, Hyun Kyu Song
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-021-91886-w
Critical assessment of coiled-coil predictions based on protein structure dataCited by: 11
Author(s): Dominic Simm, Klas Hatje, Stephan Waack, Martin Kollmar
Software Mentions: 1
Published: over 3 years ago
10.1128/mBio.01112-18
The ICP27 Homology Domain of the Human Cytomegalovirus Protein UL69 Adopts a Dimer-of-Dimers StructureCited by: 8
Author(s): Richard B. Tunnicliffe, Richard F. Collins, Hilda D. Ruiz Nivia, Rozanne M. Sandri‐Goldin, Alexander P. Golovanov
Software Mentions: 1
Published: over 6 years ago
10.1016/j.isci.2019.10.067
Calumenin-1 Interacts with Climp63 to Cooperatively Determine the Luminal Width and Distribution of Endoplasmic Reticulum SheetsCited by: 24
Author(s): Birong Shen, Pengli Zheng, Nannan Qian, Qingzhou Chen, Xin Zhou, Junjie Hu, Jianguo Chen, Teng Jiang
Software Mentions: 1
Published: almost 5 years ago
10.1155/2015/371626
Analysis of AKAP7<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" id="M1"><mml:mrow><mml:mi mathvariant="bold-italic">γ</mml:mi></mml:mrow></mml:math> DimerizationCited by: 4
Author(s): Avtar Singh, Marc Rigatti, Andrew Le, Cathrine R. Carlson, Ion I. Moraru, Kimberly L. Dodge‐Kafka
Software Mentions: 1
Published: about 9 years ago
10.1186/s12866-020-02079-w
Revealing biophysical properties of KfrA-type proteins as a novel class of cytoskeletal, coiled-coil plasmid-encoded proteinsCited by: 2
Author(s): M. Adamczyk, Ewa Lewicka, Roza Szatkowska, Hanna Nieznańska, Jan Ludwiczak, Maciej Jasiński, Stanisław Dunin-Horkawicz, Ewa Sitkiewicz, Bianka Świderska, Grażyna Goch, Grażyna Jagura-Burdzy
Software Mentions: 1
Published: almost 4 years ago
10.26508/lsa.201800169
KIF18A's neck linker permits navigation of microtubule-bound obstacles within the mitotic spindleCited by: 13
Author(s): Heidi L.H. Malaby, Dominique V. Lessard, Christopher L. Berger, Jason Stumpff
Software Mentions: 1
Published: almost 6 years ago
10.3389/fmolb.2017.00017
Electron Microscopy Structural Insights into CPAP Oligomeric Behavior: A Plausible Assembly Process of a Supramolecular Scaffold of the CentrosomeCited by: 4
Author(s): Ana L. Alvarez-Cabrera, Sandra Delgado, David Gil, Gulnahar B. Mortuza, Guillermo Montoya, Carlos Óscar S. Sorzano, Tang K. Tang, José Marı́a Carazo
Software Mentions: 1
Published: over 7 years ago
10.3389/fpls.2020.01246
Similar but Not Identical—Binding Properties of LSU (Response to Low Sulfur) Proteins From Arabidopsis thalianaCited by: 14
Author(s): Anna Niemiro, Dominik Cysewski, Jerzy Brzywczy, Anna Wawrzyńska, Marzena Sieńko, Jarosław Poznański, Agnieszka Sirko
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-021-91289-x
vB_BcM_Sam46 and vB_BcM_Sam112, members of a new bacteriophage genus with unusual small terminase structureCited by: 6
Author(s): Olesya A. Kazantseva, Emma G. Piligrimova, Andrey M. Shadrin
Software Mentions: 1
Published: over 3 years ago