Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: LEAP
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/LEAP
Constructing Gene Co-Expression Networks for Single-Cell
RNA-Sequencing Data Using Pseudotime Ordering
2 versions
Latest release: about 8 years ago
141 downloads last month
Papers Mentioning LEAP 135
10.1186/1471-2474-12-83
Evaluating the health and economic impact of osteoarthritis pain in the workforce: results from the National Health and Wellness SurveyCited by: 99
Author(s): Marco DiBonaventura, Shaloo Gupta, Margaret McDonald, Alesia Sadosky
Software Mentions: 1
Published: over 13 years ago
10.1186/s12883-015-0491-1
Protocol of a randomised delayed-start double-blind placebo-controlled multi-centre trial for Levodopa in EArly Parkinson’s disease: the LEAP-studyCited by: 13
Author(s): Constant V. M. Verschuur, Sven R. Suwijn, Bart Post, Marcel G. W. Dijkgraaf, B.R. Bloem, J.J. van Hilten, van Teus Laar, Gerrit Tissingh, Günther Deuschl, Anthony E. Lang, Rob J. de Haan, Rob M.A. de Bie
Software Mentions: 1
Published: almost 9 years ago
10.1186/s12888-021-03466-x
Implementing a digital mental health intervention for individuals with psychosis - a multi-country qualitative studyCited by: 5
Author(s): Tamara Pemovska, Aliriza Arënliu, Jon Konjufca, Fitim Uka, Jennifer Hunter, Stojan Bajraktarov, Lidija Injac Stevović, Stefan Jerotić, Alma Džubur Kulenović, Antoni Novotni, Ljubiša Novotni, Tamara Radojičić, Selman Repišti, Emina Ribić, Ivan Ristić, Eldina Smajić Mešević, Mirjana Zebić, Nikolina Jovanović
Software Mentions: 1
Published: about 3 years ago
10.1186/s12889-020-09062-0
A scoping review of evaluation frameworks and their applicability to real-world physical activity and dietary change programme evaluationCited by: 18
Author(s): Judith F. Fynn, Wendy Hardeman, Karen Milton, Andy Jones
Software Mentions: 1
Published: over 4 years ago
10.1186/1471-2458-14-649
Effectiveness of a school-community linked program on physical activity levels and health-related quality of life for adolescent girlsCited by: 48
Author(s): Meghan Casey, Jack Harvey, Amanda Telford, Rochelle Eime, Amanda Mooney, Warren Payne
Software Mentions: 1
Published: over 10 years ago
10.1186/s13040-016-0108-2
ProtNN: fast and accurate protein 3D-structure classification in structural and topological spaceCited by: 9
Author(s): Wajdi Dhifli, Abdoulaye Baniré Diallo
Software Mentions: 1
Published: about 8 years ago
10.3390/biology3040645
A Structural Switch between Agonist and Antagonist Bound Conformations for a Ligand-Optimized Model of the Human Aryl Hydrocarbon Receptor Ligand Binding DomainCited by: 40
Author(s): Arden Perkins, Jessica Phillips, Nancy I. Kerkvliet, Robert L. Tanguay, Gary H. Perdew, Siva Kumar Kolluri, William H. Bisson
Software Mentions: 1
Published: about 10 years ago
10.2349/biij.6.4.e33
Critical limb ischaemia in a diabetic population from an Asian Centre: angiographic pattern of disease and 3-year limb salvage rate with percutaneous angioplasty as first line of treatmentCited by: 7
Author(s): Ming Ngan Aloysius Tan, Uei Pua, Daniel Wong, Sundeep Punamiya, G C Chua, Nee Beng Teo
Software Mentions: 1
Published: about 14 years ago
10.1155/2015/905261
A Practical and Scalable Tool to Find Overlaps between SequencesCited by: 8
Author(s): Maan Haj Rachid, Qutaibah M. Malluhi
Software Mentions: 1
Published: almost 10 years ago
10.1007/s40708-015-0023-1
Identifying HIV-induced subgraph patterns in brain networks with side informationCited by: 9
Author(s): Binggang Cao, Xiangnan Kong, Jingyuan Zhang, Philip S. Yu, Ann B. Ragin
Software Mentions: 1
Published: almost 9 years ago
10.1007/s40708-015-0021-3
A review of heterogeneous data mining for brain disorder identificationCited by: 13
Author(s): Binggang Cao, Xiangnan Kong, Philip S. Yu
Software Mentions: 1
Published: about 9 years ago
10.3390/ma12203411
Application of Two-Photon-Absorption Pulsed Laser for Single-Event-Effects Sensitivity Mapping TechnologyCited by: 6
Author(s): Cheng Gu, Rui Chen, George Belev, Shuting Shi, Haonan Tian, Issam Nofal, Li Chen
Software Mentions: 1
Published: about 5 years ago
10.3390/mi11050502
STT-DPSA: Digital PUF-Based Secure Authentication Using STT-MRAM for the Internet of ThingsCited by: 6
Author(s): Wen-Chen Chien, Yu-Chian Chang, Yao-Tung Tsou, Sy‐Yen Kuo, Ching-Hung Chang
Software Mentions: 1
Published: over 4 years ago
10.1186/s13229-017-0146-8
The EU-AIMS Longitudinal European Autism Project (LEAP): design and methodologies to identify and validate stratification biomarkers for autism spectrum disordersCited by: 169
Author(s): Eva Loth, Tony Charman, Luke Mason, Julian Tillmann, Emily J. H. Jones, Caroline Wooldridge, Jumana Ahmad, Bonnie Auyeung, Claudia Brogna, Sara Ambrosino, Tobias Banaschewski, Simon Baron‐Cohen, Sarah Baumeister, Christian F. Beckmann, Michael Brammer, Daniel Brandeis, Sven Bölte, Thomas Bourgeron, Carsten Bours, Yvette de Bruijn, Bhismadev Chakrabarti, Daisy Crawley, Ineke Cornelissen, Flavio Dell’Acqua, Guillaume Dumas, Sarah Durston, Christine Ecker, Jessica Faulkner, Vincent Frouin, Pilar Garcés, David Goyard, Hannah Hayward, Lindsay Ham, Joerg F. Hipp, Rosemary Holt, Mark H. Johnson, Johan Isaksson, Prantik Kundu, Meng‐Chuan Lai, Xavier Liogier d’Ardhuy, Michael Lombardo, David J. Lythgoe, René C.W. Mandl, Andreas Meyer‐Lindenberg, Carolin Moessnang, Nico Mueller, Laurence O’Dwyer, Marianne Oldehinkel, Bob Oranje, Gahan Pandina, Antonio M. Persico, Amber Ruigrok, Barbara Ruggeri, Jessica Sabet, Roberto Sacco, Antonia San José Cáceres, Emily Simonoff, Roberto Toro, Heike Tost, Jack Waldman, Steven Williams, Marcel P. Zwiers, Will Spooren, Declan Murphy, Jan K. Buitelaar
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules25081785
Understanding the Hsp90 N-Terminal Dynamics: Structural and Molecular Insights into the Therapeutic Activities of Anticancer Inhibitors Radicicol (RD) and Radicicol Derivative (NVP-YUA922)Cited by: 11
Author(s): Ayanda M. Magwenyane, Ndumiso N. Mhlongo, Monsurat M. Lawal, Daniel G. Amoako, Anou M. Somboro, Sphelele C. Sosibo, Letitia Shunmugam, René B. Khan, Hezekiel M. Kumalo
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules25184247
Probing the Highly Disparate Dual Inhibitory Mechanisms of Novel Quinazoline Derivatives against Mycobacterium tuberculosis Protein Kinases A and BCited by: 1
Author(s): Fisayo A. Olotu
Software Mentions: 1
Published: about 4 years ago
10.11604/pamj.2014.18.16.1661
Leishmaniasis in Uganda: historical account and a review of the literature.Cited by: 5
Author(s): Joseph Olobo-Okao, Patrick Sagaki
Software Mentions: 1
Published: almost 11 years ago
10.1186/s40814-021-00852-w
Lifestyle, exercise and activity package for people living with progressive multiple sclerosis (LEAP-MS): protocol for a single-arm feasibility studyCited by: 2
Author(s): Julie Latchem-Hastings, Elizabeth Randell, Kate Button, Fiona Jones, Rachel Lowe, Helen Dawes, Fiona Wood, Freya Davies, Vincent Poile, Rhian O’Halloran, Barbara Stensland, Emma Tallantyre, Rebecca Playle, Adrian Edwards, Monica Busse
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pbio.3000516
Data-driven analyses of motor impairments in animal models of neurological disordersCited by: 19
Author(s): Hardeep Singh Ryait, Edgar Bermudez-Contreras, Matthew Harvey, Jamshid Faraji, Behroo Mirza Agha, Andrea Gómez Palacio Schjetnan, Aaron J. Gruber, Jon B. Doan, Majid H. Mohajerani, Gerlinde A. S. Metz, Ian Q. Whishaw, Artur Luczak
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pcbi.1005360
Effects of FGFR2 kinase activation loop dynamics on catalytic activityCited by: 9
Author(s): Jerome M. Karp, Samuel Sparks, David Cowburn
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pcbi.0020027
Folding Very Short Peptides Using Molecular DynamicsCited by: 62
Author(s): Bosco Ho, Ken A. Dill
Software Mentions: 1
Published: over 18 years ago
10.1371/journal.pntd.0000709
Geographical Variation in the Response of Visceral Leishmaniasis to Paromomycin in East Africa: A Multicentre, Open-Label, Randomized TrialCited by: 114
Author(s): Asrat Hailu, Ahmed Musa, Monique Wasunna, Manica Balasegaram, Sisay Yifru, Getahun Mengistu, Zewdu Hurissa, Workagegnehu Hailu, Teklu Weldegebreal, Samson Tesfaye, Eyasu Makonnen, E. A. G. Khalil, Osama Ahmed, Ahmed Fadlalla, Ahmed M. Elhassan, Muzamil Raheem, Marius Mueller, Yousif Koummuki, Juma Rashid, Jane Mbui, Geoffrey Mucee, Simon Njoroge, Veronica Manduku, Alice Musibi, Geoffrey Mutuma, Fredrick Kirui, Hudson A. Lodenyo, Dedan Mutea, George Kirigi, Tansy Edwards, P. G. Smith, Lawrence Muthami, Catherine Royce, Sally Ellis, Moses Alobo, Raymond Omollo, Josephine Kesusu, Rhoda Owiti, John Kinuthia
Software Mentions: 1
Published: about 14 years ago
10.1371/journal.pone.0159703
Pilot Randomised Controlled Trial of a Web-Based Intervention to Promote Healthy Eating, Physical Activity and Meaningful Social Connections Compared with Usual Care Control in People of Retirement Age Recruited from WorkplacesCited by: 52
Author(s): José Lara, Nicola O’Brien, Alan Godfrey, Ben Heaven, E. Hywel Evans, Scott Lloyd, Suzanne Moffatt, Paula Moynihan, Thomas D. Meyer, Lynn Rochester, Falko F. Sniehotta, Martin White, John C. Mathers
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0144440
TcCYPR04, a Cacao Papain-Like Cysteine-Protease Detected in Senescent and Necrotic Tissues Interacts with a Cystatin TcCYS4Cited by: 5
Author(s): Thyago Hermylly Santana Cardoso, Ana Camila Oliveira Freitas, Bruno Silva Andrade, Aurizângela Oliveira de Sousa, André da Silva Santiago, Daniela Martins Koop, Karina Peres Gramacho, Fátima Cerqueira Alvim, Fabienne Micheli, Carlos Priminho Pirovani
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0036968
Computational and Statistical Analyses of Amino Acid Usage and Physico-Chemical Properties of the Twelve Late Embryogenesis Abundant Protein ClassesCited by: 52
Author(s): Emmanuel Jaspard, David Macherel, Gilles Hunault
Software Mentions: 1
Published: over 12 years ago
10.1007/s10567-018-0271-8
Technology Delivered Interventions for Depression and Anxiety in Children and Adolescents: A Systematic Review and Meta-analysisCited by: 172
Author(s): Rebecca Grist, Abigail Croker, Megan Denne, Paul Stallard
Software Mentions: 1
Published: about 6 years ago
10.1016/j.dib.2015.09.045
Data analysis and other considerations concerning the study of precipitation in Al–Mg–Si alloys by Atom Probe TomographyCited by: 18
Author(s): M.W. Zandbergen, Qingyu Xu, A. Cerezo, George Davey Smith
Software Mentions: 1
Published: almost 9 years ago
10.1007/s00259-019-04550-x
The P2X7 receptor tracer [11C]SMW139 as an in vivo marker of neuroinflammation in multiple sclerosis: a first-in man studyCited by: 38
Author(s): Marloes Hagens, Sandeep S.V. Golla, Bieneke Janssen, Daniëlle J. Vugts, Wissam Beaino, Albert D. Windhorst, James O’Brien-Brown, Michael Kassiou, Robert C. Schuit, Lothar A. Schwarte, Helga E. de Vries, Joep Killestein, Frederik Barkhof, Bart N.M. van Berckel, Adriaan A. Lammertsma
Software Mentions: 1
Published: about 5 years ago
10.3389/fnbeh.2020.00116
SnakeStrike: A Low-Cost Open-Source High-Speed Multi-Camera Motion Capture SystemCited by: 2
Author(s): Grady W. Jensen, Patrick van der Smagt, Egon Heiss, Hans Straka, Tobias Kohl
Software Mentions: 1
Published: over 4 years ago
10.3389/fncel.2019.00021
Default Mode Network Structural Integrity and Cerebellar Connectivity Predict Information Processing Speed Deficit in Multiple SclerosisCited by: 16
Author(s): Giovanni Savini, Matteo Pardini, Gloria Castellazzi, A. Lascialfari, Declan Chard, Egidio D’Angelo, C Wheeler-Kingshott
Software Mentions: 1
Published: over 5 years ago
10.3389/fnhum.2016.00053
Prefrontal Cortex Activation Upon a Demanding Virtual Hand-Controlled Task: A New Frontier for NeuroergonomicsCited by: 27
Author(s): Marika Carrieri, Andrea Petracca, Stefania Lancia, Sara Basso Moro, Sabrina Brigadoi, Matteo Spezialetti, Marco Ferrari, Giuseppe Placidi, Valentina Quaresima
Software Mentions: 1
Published: over 8 years ago
10.3389/fimmu.2021.617731
Preventing Atopic Diseases During Childhood – Early Exposure MattersCited by: 10
Author(s): Mandy Pierau, Aditya Arra, Monika C. Brunner‐Weinzierl
Software Mentions: 1
Published: over 3 years ago
10.3389/fnins.2015.00456
Non-Local Means Inpainting of MS Lesions in Longitudinal Image ProcessingCited by: 14
Author(s): Nicolas Guizard, Kunio Nakamura, Pierrick Coupé, Vladimir S. Fonov, Douglas L. Arnold, D. Louis Collins
Software Mentions: 1
Published: almost 9 years ago
10.3389/fnins.2021.686767
A Neural Network Reveals Motoric Effects of Maternal Preconception Exposure to Nicotine on Rat Pup Behavior: A New Approach for Movement Disorders DiagnosisCited by: 6
Author(s): Reza Torabi, Serena Jenkins, Allonna Harker, Ian Q. Whishaw, Robbin Gibb, Artur Luczak
Software Mentions: 1
Published: over 3 years ago