Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: LDcorSV
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/LDcorSV
Linkage Disequilibrium Corrected by the Structure and the
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Latest release: about 4 years ago
189 downloads last month
Papers Mentioning LDcorSV 25
10.3390/genes12091443
Breeding Tomato Hybrids for Flavour: Comparison of GWAS Results Obtained on Lines and F1 HybridsCited by: 8
Author(s): Estelle Bineau, José L. Rambla, Santiago Priego-Cubero, Alexandre Hereil, Frédérique Bitton, Clémence Plissonneau, Antonio Granell, Mathilde Causse
Software Mentions: 11
Published: about 3 years ago
10.1371/journal.pgen.1009268
Genetic diversity of the Plasmodium falciparum GTP-cyclohydrolase 1, dihydrofolate reductase and dihydropteroate synthetase genes reveals new insights into sulfadoxine-pyrimethamine antimalarial drug resistanceCited by: 12
Author(s): Anna Turkiewicz, Emilia Mańko, Colin J. Sutherland, Ernest Diez Benavente, Susana Campino, Taane G. Clark
Software Mentions: 8
Published: almost 4 years ago
10.3389/fpls.2019.01481
Understanding the Genetic Basis of Spike Fertility to Improve Grain Number, Harvest Index, and Grain Yield in Wheat Under High Temperature Stress EnvironmentsCited by: 33
Author(s): Sumit Pradhan, Ali Babar, Kelly R. Robbins, Guihua Bai, Richard E. Mason, Jahangir Khan, Dipendra Shahi, Muhsin Avci, Jia Guo, Mohammad Maksud Hossain, Madhav Bhatta, Maryati Mohamed, Senthold Asseng, Paul St. Amand, Salvador A. Gezan, Byung‐Kee Baik, Ann R. Blount, Amy Bernardo
Software Mentions: 7
Published: almost 5 years ago
10.1534/g3.120.401234
Genetic Characterization of a Wheat Association Mapping Panel Relevant to Brazilian Breeding Using a High-Density Single Nucleotide Polymorphism ArrayCited by: 8
Author(s): Greg Mellers, Jorge González Aguilera, Nick Bird, A. L. V. Bonato, Sandro Bonow, E. Caierão, Luciano Consoli, F. M. Santana, James Simmonds, Andrew Steed, G. A. M. Torres, Cristóbal Uauy, Tally I C Wright, P. L. Scheeren, P. Nicholson, James Cockram
Software Mentions: 6
Published: over 4 years ago
10.1186/s12864-017-3920-2
Genomic prediction in contrast to a genome-wide association study in explaining heritable variation of complex growth traits in breeding populations of EucalyptusCited by: 59
Author(s): Bárbara S. F. Müller, Leandro G. Neves, Janeo Eustáquio de Almeida Filho, M. D. V. de Resende, Patricio Muñoz, P. E. T. dos Santos, E. Paludzyszyn Filho, Matias Kirst, Dário Grattapaglia
Software Mentions: 5
Published: over 7 years ago
10.1186/s12864-020-6717-7
Genetic dissection of heat-responsive physiological traits to improve adaptation and increase yield potential in soft winter wheatCited by: 9
Author(s): Sumit Pradhan, Ali Babar, Guihua Bai, Jahangir Khan, Dipendra Shahi, Muhsin Avci, Jia Guo, Jordan C. McBreen, Senthold Asseng, Salvador A. Gezan, Byung‐Kee Baik, Ann R. Blount, Stephen A. Harrison, Suraj Sapkota, Paul St. Amand, Sanju Kunwar
Software Mentions: 4
Published: over 4 years ago
10.1002/ece3.929
Evidence for nonallopatric speciation among closely related sympatric<i><scp>H</scp>eliotropium</i>species in the<scp>A</scp>tacama<scp>D</scp>esertCited by: 10
Author(s): Federico Luebert, Pit Jacobs, Hartmut H. Hilger, Ludo A. H. Muller
Software Mentions: 4
Published: almost 11 years ago
10.1038/s41598-021-82437-4
Population structure, genetic diversity and genomic selection signatures among a Brazilian common bean germplasmCited by: 38
Author(s): Jéssica Delfini, Vânia Moda-Cirino, José dos Santos Neto, Paulo Maurício Ruas, Gustavo César Sant’Ana, Paul Gepts, Leandro Simões Azeredo Gonçalves
Software Mentions: 3
Published: almost 4 years ago
10.3390/ph13110414
VEGF-Related Germinal Polymorphisms May Identify a Subgroup of Breast Cancer Patients with Favorable Outcome under Bevacizumab-Based Therapy—A Message from COMET, a French Unicancer Multicentric StudyCited by: 5
Author(s): Jocelyn Gal, Gérard Milano, Patrick Brest, Nathalie Ebran, Julia Gilhodes, Laurence Llorca, Coraline Dubot, Gilles Romieu, Isabelle Desmoulins, Étienne Brain, Anthony Gonçalvès, Jean-Marc Ferrero, Paul‐Henri Cottu, Marc Debled, Olivier Trédan, Emmanuel Chamorey, Marco Merlano, Jérôme Lemonnier, Marie-Christine Étienne-Grimaldi, Jean‐Yves Pierga
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0102448
Using Genotyping-By-Sequencing (GBS) for Genomic Discovery in Cultivated OatCited by: 145
Author(s): Yung‐Fen Huang, Jesse Poland, Charlene P. Wight, Eric W. Jackson, Nicholas A. Tinker
Software Mentions: 3
Published: over 10 years ago
10.1002/ece3.6641
Distribution of genetic variation underlying adult migration timing in steelhead of the Columbia River basinCited by: 12
Author(s): Erin E. Collins, John S. Hargrove, Thomas A. Delomas, Shawn R. Narum
Software Mentions: 3
Published: over 4 years ago
10.1002/ece3.6645
Power of a dual‐use SNP panel for pedigree reconstruction and population assignmentCited by: 13
Author(s): Samuel A. May, Garrett J. McKinney, Ray Hilborn, Lorenz Hauser, Kerry A. Naish
Software Mentions: 3
Published: over 4 years ago
10.3389/fpls.2020.574674
Genome-Wide Association Studies Detect Multiple QTLs for Productivity in Mesoamerican Diversity Panel of Common Bean Under Drought StressCited by: 24
Author(s): P. A. M. R. Valdisser, Bárbara S. F. Müller, Janeo Eustáquio de Almeida Filho, Odilon P. Morais Júnior, C. M. Guimarães, T. C. de O. Borba, Isabela Pavanelli de Souza, Maria Imaculada Zucchi, Leandro G. Neves, Alexandre Siqueira Guedes Coelho, C. Brondani, R. P. Vianello
Software Mentions: 3
Published: about 4 years ago
10.1038/hortres.2016.70
An experimental validation of genomic selection in octoploid strawberryCited by: 71
Author(s): Salvador A. Gezan, Luis F. Osorio, Sujeet Verma, Vance M. Whitaker
Software Mentions: 2
Published: almost 8 years ago
10.1111/mpp.12874
Genome‐wide association mapping of QTLs implied in potato virus Y population sizes in pepper: evidence for widespread resistance QTL pyramidingCited by: 15
Author(s): Lucie Tamisier, Marion Szadkowski, Ghislaine Nemouchi, Véronique Lefebvre, Emmanuel Szadkowski, Renaud Duboscq, Sylvain Santoni, Gautier Sarah, Christopher Sauvage, Alain Palloix, Benoît Moury
Software Mentions: 2
Published: about 5 years ago
10.1186/s13075-017-1276-2
DNA methylation mediates genotype and smoking interaction in the development of anti-citrullinated peptide antibody-positive rheumatoid arthritisCited by: 46
Author(s): Wen Jun Meng, Zaihua Zhu, Xia Jiang, Chun Lai Too, Steffen Uebe, Maja Jagodic, Ingrid Kockum, Shahnaz Murad, Luigi Ferrucci, Lars Alfredsson, Hejian Zou, Lars Klareskog, Andrew P. Feinberg, Tomas J. Ekström, Leonid Padyukov, Yun Liu
Software Mentions: 2
Published: over 7 years ago
10.1186/s12864-017-4143-2
Molecular basis of African yam domestication: analyses of selection point to root development, starch biosynthesis, and photosynthesis related genesCited by: 19
Author(s): Roland Akakpo, Nora Scarcelli, Hâna Chaïr, Alexandre Dansi, Gustave Djèdatin, Anne-Céline Thuillet, Bénédicte Rhoné, F. Ochsenbein, Karine Alix, Yves Vigouroux
Software Mentions: 2
Published: about 7 years ago
10.1534/g3.120.401343
Development and Validation of an Open Access SNP Array for Nile Tilapia (<i>Oreochromis niloticus</i>)Cited by: 23
Author(s): Carolina Peñaloza, Diego Robledo, Agustín Barría, Trọng Quốc Trịnh, Mahirah Mahmuddin, Pamela Wiener, John A. H. Benzie, Ross D. Houston
Software Mentions: 2
Published: over 4 years ago
10.1186/s12864-017-3805-4
In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotypingCited by: 56
Author(s): P. A. M. R. Valdisser, Wendell Jacinto Pereira, Jâneo E. Almeida Filho, Bárbara S. F. Müller, G. R. C. Coelho, Ivandilson Pessoa Pinto de Menezes, João Paulo Gomes Vianna, Maria Imaculada Zucchi, Anna Cristina Lanna, Alexandre Siqueira Guedes Coelho, Jaison Pereira de Oliveira, A. da C. Moraes, C. Brondani, R. P. Vianello
Software Mentions: 2
Published: over 7 years ago
10.1111/tpj.14414
Exome sequences and multi‐environment field trials elucidate the genetic basis of adaptation in barleyCited by: 46
Author(s): Daniela Bustos-Korts, Ian K. Dawson, Joanne Russell, Alessandro Tondelli, Davide Guerra, Chiara Ferrandi, Francesco Strozzi, Ezequiel Luís Nicolazzi, Márta Molnár-Láng, Hakan Özkan, Mária Megyeri, Péter Mikó, Esra Papatya Çakır, Enes Yakışır, Noemí Trabanco, Stefano Delbono, Stylianos Kyriakidis, Allan Booth, Davide Cammarano, Martin Mascher, P. Werner, Luigi Cattivelli, Laura Rossini, Nils Stein, Benjamin Kilian, Robbie Waugh, F.A. van Eeuwijk
Software Mentions: 1
Published: over 5 years ago
10.3389/fgene.2020.596258
Independent Validation of Genomic Prediction in Strawberry Over Multiple CyclesCited by: 13
Author(s): Luis F. Osorio, Salvador A. Gezan, Sujeet Verma, Vance M. Whitaker
Software Mentions: 1
Published: almost 4 years ago
10.1038/hortres.2017.15
Genotyping-by-sequencing of pear (Pyrus spp.) accessions unravels novel patterns of genetic diversity and selection footprintsCited by: 51
Author(s): Satish Kumar, Chris Kirk, Cecilia Deng, Claudia Wiedow, Mareike Knaëbel, Lester Brewer
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pgen.1003669
Genome Wide Association Identifies Novel Loci Involved in Fungal CommunicationCited by: 85
Author(s): Javier Palma‐Guerrero, Charles R. Hall, David Kowbel, Juliet W. Welch, John W. Taylor, Rachel B. Brem, N. Louise Glass
Software Mentions: 1
Published: over 11 years ago
10.3389/fpls.2020.576078
Genetic Factors Associated With Nodulation and Nitrogen Derived From Atmosphere in a Middle American Common Bean PanelCited by: 8
Author(s): Atena Oladzad, Abiezer González, Raúl Macchiavelli, Consuelo Estévez de Jensen, James S. Beaver, Tim Porch, Phillip E. McClean
Software Mentions: 1
Published: almost 4 years ago
10.1038/s41438-018-0040-3
Genotyping-by-sequencing of Brassica oleracea vegetables reveals unique phylogenetic patterns, population structure and domestication footprintsCited by: 32
Author(s): Zachary Stansell, Katie E. Hyma, Jonathan Fresnedo-Ramírez, Qi Sun, Sharon E. Mitchell, Thomas Björkman, Jian Hua
Software Mentions: 1
Published: over 6 years ago