cran: Iso | Projects | Ecosyste.ms: Papers

10.1002/advs.201901850

Mesostigma viride Genome and Transcriptome Provide Insights into the Origin and Evolution of Streptophyta
Cited by: 29
Author(s): Zhe Liang, Yuke Geng, Changmian Ji, Hongwu Du, Chui Eng Wong, Qian Zhang, Ye Zhang, Pingxian Zhang, Adeel Riaz, Sadaruddin Chachar, Yike Ding, Jing Wen, Yun-Wen Wu, Mingcheng Wang, Hongkun Zheng, Yanmin Wu, Viktor Demko, Lisha Shen, Han Xiao, Pengpeng Zhang, Xiaofeng Gu, Hao Yu
Software Mentions: 10
Published: about 5 years ago

10.1111/pbi.12958

The developmental dynamics of the Populus stem transcriptome
Cited by: 92
Author(s): Qing Chao, Zili Gao, Dong Zhang, Biligen-Gaowa Zhao, Fengqin Dong, Chunxiang Fu, Lijun Liu, Bai-Chen Wang
Software Mentions: 8
Published: over 6 years ago

10.1111/age.12962

Using online tools at the Bovine Genome Database to manually annotate genes in the new reference genome
Cited by: 2
Author(s): Deborah A. Triant, J. J. Le Tourneau, Colin Diesh, Deepak Unni, Md. Shamimuzzaman, Amy T. Walsh, Jack M. Gardiner, Anna K Goldkamp, Yahan Li, Hung N. Nguyen, Courtney Roberts, Zhichao Zhao, L. J. Alexander, Jared E. Decker, Robert D. Schnabel, Steven G. Schroeder, Tad S. Sonstegard, Jeremy F. Taylor, Rocío Melissa Rivera, Darren E. Hagen, Christine G. Elsik
Software Mentions: 6
Published: over 4 years ago

10.1093/g3journal/jkab189

Long-read transcriptome and other genomic resources for the angiosperm Silene noctiflora
Cited by: 7
Author(s): Alissa M. Williams, Michael W. Itgen, Amanda K. Broz, Olivia G. Carter, Daniel B Sloan
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pbio.3001146

Anesthetics fragment hippocampal network activity, alter spine dynamics, and affect memory consolidation
Cited by: 26
Author(s): Yang Wei, Mattia Chini, Jastyn A. Pöpplau, A. Formozov, Alexander Dieter, Patrick Piechocinski, Cynthia Rais, Fabio Morellini, Olaf Sporns, Ileana L. Hanganu‐Opatz, J. Simon Wiegert
Software Mentions: 6
Published: over 3 years ago

10.3389/fgene.2019.01126

Characterization of Full-Length Transcriptome Sequences and Splice Variants of Lateolabrax maculatus by Single-Molecule Long-Read Sequencing and Their Involvement in Salinity Regulation
Cited by: 29
Author(s): Yuan Tian, Haishen Wen, Xin Qi, Xiaoyan Zhang, Shikai Liu, Bingyu Li, Yalong Sun, Jifang Li, Feng He, Wenzhao Yang, Yun Li
Software Mentions: 5
Published: about 5 years ago

10.1186/s12864-019-5838-3

Genome-wide profiling of the alternative splicing provides insights into development in Plutella xylostella
Cited by: 6
Author(s): Qian Zhao, Weimin Zhong, Weiyi He, Yiying Li, Yaqing Li, Tianpu Li, Liette Vasseur, Minsheng You
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pbio.3001017

Single-cell RNA-seq analysis of mouse preimplantation embryos by third-generation sequencing
Cited by: 38
Author(s): Xiaoying Fan, Dong Tang, Yuhan Liao, Pidong Li, Yu Zhang, Minxia Wang, Fan Liang, Xiao Wang, Yun Gao, Lu Wen, Depeng Wang, Yan Wang, Fuchou Tang
Software Mentions: 5
Published: almost 4 years ago

10.3390/genes12060896

Comparative Transcriptome Analysis Reveals Sex-Based Differences during the Development of the Adult Parasitic Wasp Cotesia vestalis (Hymenoptera: Braconidae)
Cited by: 2
Author(s): Yuenan Zhou, Pei‐Ling Yang, Shuang Xie, Min Shi, Jianhua Huang, Zhizhi Wang, Xue-Xin Chen
Software Mentions: 4
Published: over 3 years ago

10.1186/s12915-021-00963-z

Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly
Cited by: 64
Author(s): Mahul Chakraborty, Arunachalam Ramaiah, Adriana Adolfi, Paige Halas, Bhagyashree Kaduskar, Luna Thanh Ngo, Suvratha Jayaprasad, Kiran Paul, Saurabh Whadgar, Subhashini Srinivasan, Suresh Subramani, Ethan Bier, Anthony A. James, J. J. Emerson
Software Mentions: 4
Published: almost 4 years ago

10.3389/fgene.2019.00384

Reviving the Transcriptome Studies: An Insight Into the Emergence of Single-Molecule Transcriptome Sequencing
Cited by: 81
Author(s): Bo Wang, Vivek Kumar, Andrew Olson, Doreen Ware
Software Mentions: 4
Published: over 5 years ago

10.3389/fpls.2020.01278

Combined Proteome and Transcriptome Analysis of Heat-Primed Azalea Reveals New Insights Into Plant Heat Acclimation Memory
Cited by: 14
Author(s): Xiuyun Wang, Li Zheng, Bing Liu, Hong Zhou, Mohamed S. Elmongy, Yiping Xia
Software Mentions: 3
Published: over 4 years ago

10.1093/gigascience/giaa021

De novo assembly of the cattle reference genome with single-molecule sequencing
Cited by: 343
Author(s): Benjamin D. Rosen, Derek M. Bickhart, Robert D. Schnabel, Sergey Koren, Christine G. Elsik, Elizabeth Tseng, Troy N. Rowan, Wai Yee Low, Aleksey V. Zimin, Christine Couldrey, Richard J. Hall, Wenli Li, Arang Rhie, Jay Ghurye, Stephanie McKay, Françoise Thibaud‐Nissen, Jinna Hoffman, Brenda M. Murdoch, W. M. Snelling, T. G. McDaneld, John A. Hammond, John C. Schwartz, Wilson Nandolo, Darren E. Hagen, Christian Dreischer, Sebastian J. Schultheiß, Steven G. Schroeder, Adam M. Phillippy, John B. Cole, Curtis P. Van Tassell, George E. Liu, Timothy P. L. Smith, Juan F. Medrano
Software Mentions: 3
Published: over 4 years ago

10.1038/celldisc.2017.31

Long read reference genome-free reconstruction of a full-length transcriptome from Astragalus membranaceus reveals transcript variants involved in bioactive compound biosynthesis
Cited by: 85
Author(s): Jun Li, Yuka Harata-Lee, Matthew D. Denton, Qi Feng, Judith R. Rathjen, Zhibo Qu, David L. Adelson
Software Mentions: 2
Published: about 7 years ago

10.1002/1878-0261.12576

Identification of Eph receptor signaling as a regulator of autophagy and a therapeutic target in colorectal carcinoma
Cited by: 9
Author(s): Michael DiPrima, Dunrui Wang, Alix Tröster, Dragan Maric, Nekane Terrades-García, Tae‐Kyu Ha, Hyo‐Bum Kwak, David Sánchez‐Martín, D. Kudlinzki, Harald Schwalbe, Giovanna Tosato
Software Mentions: 2
Published: about 5 years ago

10.1186/s12864-019-6441-3

SMRT sequencing of a full-length transcriptome reveals transcript variants involved in C18 unsaturated fatty acid biosynthesis and metabolism pathways at chilling temperature in Pennisetum giganteum
Cited by: 12
Author(s): Qingyuan Li, Conglin Xiang, Lin Xu, Jinghua Cui, Shao Ping Fu, Baolin Chen, Shoukun Yang, Pan Wang, Yanfeng Xie, Ming Wei, Zhanchang Wang
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2021.683408

PacBio Iso-Seq Improves the Rainbow Trout Genome Annotation and Identifies Alternative Splicing Associated With Economically Important Phenotypes
Cited by: 22
Author(s): Ali R. Ali, Gary H. Thorgaard, Mohamed Salem
Software Mentions: 2
Published: over 3 years ago

10.3390/genes9010043

Isoform Sequencing and State-of-Art Applications for Unravelling Complexity of Plant Transcriptomes
Cited by: 54
Author(s): Dong An, Hieu X. Cao, Changsheng Li, Klaus Humbeck, Wenqin Wang
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0181324

In vitro study of accuracy of subaxial cervical pedicle screw insertion using calipers based on the gravity line
Cited by: 2
Author(s): Xiang Yao, Shiqing Liu
Software Mentions: 2
Published: over 7 years ago

10.3390/nu13041051

Energy Intake and Appetite Sensations Responses to Aquatic Cycling in Healthy Women: The WatHealth Study
Cited by: 3
Author(s): Lore Metz, Laurie Isacco, Nicole Fearnbach, Bruno Pereira, David Torgerson, Martine Duclos
Software Mentions: 1
Published: over 3 years ago

10.3762/bjoc.15.252

Synthetic terpenoids in the world of fragrances: Iso E Super®is the showcase
Cited by: 21
Author(s): Alexey Stepanyuk, Andreas Kirschning
Software Mentions: 1
Published: about 5 years ago

10.1002/mbo3.47

Diversity of symbioses between chemosynthetic bacteria and metazoans at the<scp>G</scp>uiness cold seep site (<scp>G</scp>ulf of<scp>G</scp>uinea,<scp>W</scp>est<scp>A</scp>frica)
Cited by: 25
Author(s): Sébastien Duperron, Clara F. Rodrigues, Nelly Léger, Kamil M. Szafrański, Carole Decker, Karine Olu, Sylvie M. Gaudron
Software Mentions: 1
Published: about 12 years ago

10.1128/MRA.01221-18

Draft Genome Assembly of the Poultry Red Mite, Dermanyssus gallinae
Cited by: 25
Author(s): Stewart T. G. Burgess, Kathryn Bartley, Francesca Nunn, Harry W. Wright, Margaret Hughes, Matthew Gemmell, Sam Haldenby, Steve Paterson, Stéphane Rombauts, Fiona M. Tomley, Damer P. Blake, James Pritchard, Sabine Schicht, Christina Strübe, Øivind Øines, Thomas Van Leeuwen, Yves Van de Peer, Alasdair J. Nisbet
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.11085

Segmental analysis by speckle-tracking echocardiography of the left ventricle response to isoproterenol in male and female mice
Cited by: 7
Author(s): Élisabeth Walsh-Wilkinson, Marie Arsenault, Jacques Couët
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0113010

On the Evolution of Yeti, a Drosophila melanogaster Heterochromatin Gene
Cited by: 6
Author(s): Roberta Moschetti, Emanuele Celauro, Fulvio Cruciani, Ruggiero Caizzi, Patrizio Dimitri
Software Mentions: 1
Published: about 10 years ago

10.7759/cureus.10724

Navigated Placement of Two Odontoid Screws Using the O-Arm Navigation System: A Technical Case Report
Cited by: 0
Author(s): Clara K Starkweather, Ramin A. Morshed, Caleb Rutledge, Phiroz E. Tarapore
Software Mentions: 1
Published: about 4 years ago

10.1093/gigascience/giy009

Single-molecule, full-length transcript sequencing provides insight into the extreme metabolism of the ruby-throated hummingbird Archilochus colubris
Cited by: 53
Author(s): Rachael E. Workman, Alexander M. Myrka, G. William Wong, Elizabeth Tseng, Kenneth C. Welch, Winston Timp
Software Mentions: 1
Published: almost 7 years ago

10.4103/0019-5413.36993

Role of intraoperative Iso-C based navigation in challenging spine trauma
Cited by: 14
Author(s): Ashish Jaiswal, Ajoy Prasad Shetty, S. Rajasekaran
Software Mentions: 1
Published: almost 18 years ago

10.1002/acm2.12534

Radiation dose and image quality comparison during spine surgery with two different, intraoperative 3D imaging navigation systems
Cited by: 30
Author(s): Rami Nachabé, Keith J. Strauss, Beth A. Schueler, Mohamad Bydon
Software Mentions: 1
Published: almost 6 years ago

10.1098/rsos.191501

Fauna of the Kemp Caldera and its upper bathyal hydrothermal vents (South Sandwich Arc, Antarctica)
Cited by: 14
Author(s): Katrin Linse, Jonathan T. Copley, Douglas P. Connelly, Robert D Larter, David A. Pearce, Nicholas V. C. Polunin, Alex D. Rogers, Chong Chen, Andrew Clarke, Adrian G. Glover, Alastair G C Graham, Veerle Huvenne, Leigh Marsh, William D. Reid, Christopher Nicolai Roterman, Christopher J. Sweeting, Katrin Zwirglmaier, Paul A. Tyler
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-33245-w

Dual Porosity Protein-based Scaffolds with Enhanced Cell Infiltration and Proliferation
Cited by: 41
Author(s): Morteza Rasoulianboroujeni, Nasim Kiaie, Fahimeh Tabatabaei, Amir Yadegari, Farahnaz Fahimipour, Kimia Khoshroo, Lobat Tayebi
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-38021-4

Study of the whole genome, methylome and transcriptome of Cordyceps militaris
Cited by: 15
Author(s): Yujiao Chen, Yuqian Wu, Li Liu, Jianhua Feng, Tiancheng Zhang, Sheng Qin, Xingyu Zhao, Chaoxia Wang, Dongmei Li, Wei Han, Ming-Hui Shao, Ping Zhao, Jianfeng Xue, Xiaomin Liu, Hongjie Li, Enwei Zhao, Wei Zhao, Xijie Guo, Yongfeng Jin, Yaming Cao, Liwang Cui, Zheng Zhou, Qingyou Xia, Z. Rao, Yaozhou Zhang
Software Mentions: 1
Published: almost 6 years ago

Ecosyste.ms: Papers

Projects: cran: Iso

Papers Mentioning Iso 32