Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: HaploSim

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/HaploSim

Functions to Simulate Haplotypes
7 versions
Latest release: about 2 years ago
1 dependent package
957 downloads last month

Papers Mentioning HaploSim 10

Tools for Genetic Studies in Experimental Populations of Polyploids
Cited by: 121
Author(s): Peter M. Bourke, Roeland E. Voorrips, Richard G. F. Visser, Chris Maliepaard
Software Mentions: 8
Published: over 6 years ago

10.1186/1297-9686-42-9

Sensitivity of methods for estimating breeding values using genetic markers to the number of QTL and distribution of QTL variance
Cited by: 40
Author(s): Albart Coster, J.W.M. Bastiaansen, M.P.L. Calus, J.A.M. van Arendonk, H. Bovenhuis
Software Mentions: 3
Published: over 14 years ago

10.1186/1753-6561-5-S7-O13

Genomic selection in tree breeding: testing accuracy of prediction models including dominance effect
Cited by: 10
Author(s): Marie Denis, Jean‐Marc Bouvet
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pgen.1006288

Using Genetic Distance to Infer the Accuracy of Genomic Prediction
Cited by: 98
Author(s): Marco Scutari, Ian Mackay, David J. Balding
Software Mentions: 2
Published: about 8 years ago

10.1186/1297-9686-44-3

Long-term response to genomic selection: effects of estimation method and reference population structure for different genetic architectures
Cited by: 49
Author(s): J.W.M. Bastiaansen, Albart Coster, M.P.L. Calus, J.A.M. van Arendonk, H. Bovenhuis
Software Mentions: 2
Published: over 12 years ago

10.1186/s12711-015-0092-x

Improving the computational efficiency of fully Bayes inference and assessing the effect of misspecification of hyperparameters in whole-genome prediction models
Cited by: 13
Author(s): Wenzhao Yang, Chun-Yu Chen, Robert J. Tempelman
Software Mentions: 1
Published: over 9 years ago

10.1186/1753-6561-4-S1-S3

QTLMAS 2009: simulated dataset
Cited by: 14
Author(s): Albart Coster, J.W.M. Bastiaansen, M.P.L. Calus, Chris Maliepaard, M.C.A.M. Bink
Software Mentions: 1
Published: over 14 years ago

10.3389/fpls.2018.01660

Current Strategies of Polyploid Plant Genome Sequence Assembly
Cited by: 140
Author(s): Maria Kyriakidou, Helen H. Tai, Noelle L. Anglin, David Ellis, Martina V. Strömvik
Software Mentions: 1
Published: almost 6 years ago

10.1534/g3.111.001297

Simulated Data for Genomic Selection and Genome-Wide Association Studies Using a Combination of Coalescent and Gene Drop Methods
Cited by: 63
Author(s): John M. Hickey, Gregor Gorjanc
Software Mentions: 1
Published: over 12 years ago

10.1186/s12864-015-1866-9

Long-term genomic selection for heterosis without dominance in multiplicative traits: case study of bunch production in oil palm
Cited by: 27
Author(s): David Cros, Marie Denis, Jean‐Marc Bouvet, Leopoldo Sánchez
Software Mentions: 1
Published: about 9 years ago