cran: HH | Projects | Ecosyste.ms: Papers

10.18632/aging.202174

Periodontitis in elderly patients with type 2 diabetes mellitus: impact on gut microbiota and systemic inflammation
Cited by: 18
Author(s): Jinyou Li, Haifeng Lü, Hengchao Wu, Shunmei Huang, Lufang Chen, Qifeng Gui, Wenjing Zhou, Yichen Yang, Yue Wu, Hua Zhang, Qin Zhang, Yunmei Yang
Software Mentions: 10
Published: almost 4 years ago

10.1038/s41598-018-35448-7

Biodiversity in remnants of natural mountain forests under conservation-oriented management
Cited by: 8
Author(s): Jakub Horák, Jan Materna, Josef P. Halda, Strahinja Mladenović, Petr Bogusch, Pavel Pech
Software Mentions: 8
Published: almost 6 years ago

10.1002/ece3.5852

Investigating the environmental drivers of deep‐seafloor biodiversity: A case study of peracarid crustacean assemblages in the Northwest Atlantic Ocean
Cited by: 13
Author(s): Oliver S. Ashford, Andrew Kenny, Christopher R.S. Barrio Froján, Tammy Horton, Alex D. Rogers
Software Mentions: 7
Published: almost 5 years ago

10.1111/jbi.12777

Predictors of shell size in long‐lived lake gastropods
Cited by: 7
Author(s): Thomas A. Neubauer, Elisavet Georgopoulou, Mathias Harzhauser, Oleg Mandić, Andreas Kroh
Software Mentions: 6
Published: over 8 years ago

10.1186/1471-2407-14-994

The association between Histone 3 Lysine 27 Trimethylation (H3K27me3) and prostate cancer: relationship with clinicopathological parameters
Cited by: 43
Author(s): Marjolaine Ngollo, André Lebert, Aslihan Dagdemir, Gaëlle Judes, Seher Karslı-Çeppioğlu, Marine Daures, Jean‐Louis Kemeny, Frédérique Penault‐Llorca, Jean‐Paul Boiteux, Yves‐Jean Bignon, Laurent Guy, Dominique Bernard‐Gallon
Software Mentions: 5
Published: almost 10 years ago

10.1371/journal.pone.0252862

Approaches to measure class importance in Knowledge Graphs
Cited by: 2
Author(s): Daniel Fernández-Álvarez, Johannes Frey, José Emilio Labra Gayo, Daniel Gayo-Avello, Sebastian Hellmann
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0104947

Voxel-Wise Motion Artifacts in Population-Level Whole-Brain Connectivity Analysis of Resting-State fMRI
Cited by: 22
Author(s): Tamás Spisák, András Jakab, Sándor Attila Kis, Gábor Opposits, Csaba Aranyi, Ervin Berényi, Miklós Emri
Software Mentions: 5
Published: about 10 years ago

10.1038/s41598-021-94615-5

Macroscale patterns of oceanic zooplankton composition and size structure
Cited by: 18
Author(s): Manoela C. Brandão, Fabio Benedetti, Séverine Martini, Yawouvi Dodji Soviadan, Jean‐Olivier Irisson, Jean‐Baptiste Romagnan, Amanda Elineau, Corinne Desnos, Laëtitia Jalabert, Andréa S. Freire, Marc Picheral, Lionel Guidi, Gabriel Gorsky, Chris Bowler, Lee Karp‐Boss, Nicolas Henry, Colomban de Vargas, Matthew B. Sullivan, Silvia G. Acinas, Marcel Babin, Peer Bork, Emmanuel Boss, Chris Bowler, Guy Cochrane, Colomban de Vargas, Gabriel Gorsky, Lionel Guidi, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels, Lee Karp‐Boss, Eric Karsenti, Fabrice Not, Hiroyuki Ogata, Nicole Poulton, Stéphane Pesant, Jeroen Raes, Christian Sardet, Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Shinichi Sunagawa, Patrick Wincker, Lars Stemmann, Fabien Lombard
Software Mentions: 5
Published: over 3 years ago

10.3390/s16060804

Integrated Toolset for WSN Application Planning, Development, Commissioning and Maintenance: The WSN-DPCM ARTEMIS-JU Project
Cited by: 6
Author(s): Christos Antonopoulos, Katerina Asimogloy, Sarah Chiti, L. D’Onofrio, Simone Gianfranceschi, Danping He, Antonio Iodice, Stavros Koubias, Christos Koulamas, Luciano Lavagno, Mihai T. Lazarescu, Gabriel Mujica, George Papadopoulos, Jorge Portilla, Luis Redondo, Daniele Riccio, Teresa Riesgo, Daniel Rodríguez, Giuseppe Ruello, Vasilis Samoladas, Tsenka Stoyanova, Gerasimos Touliatos, Angela Valvo, Georgia Vlahoy
Software Mentions: 5
Published: over 8 years ago

10.1093/aobpla/ply009

Differentiation in native as well as introduced ranges: germination reflects mean and variance in cover of surrounding vegetation
Cited by: 1
Author(s): Tina Heger, Gabriele Nikles, Brooke S. Jacobs
Software Mentions: 4
Published: almost 7 years ago

10.1186/s13012-020-00985-1

Proceedings from the 12th Annual Conference on the Science of Dissemination and Implementation
Cited by: 2
Author(s):
Software Mentions: 4
Published: over 4 years ago

10.7717/peerj.1592

The role of geography and host abundance in the distribution of parasitoids of an alien pest
Cited by: 7
Author(s): Petra Nováková, Jaroslav Holuša, Jakub Horák
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0192563

shinyGISPA: A web application for characterizing phenotype by gene sets using multiple omics data combinations
Cited by: 3
Author(s): Bhakti Dwivedi, Jeanne Kowalski
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pbio.1001446

Reconstruction of Ancestral Metabolic Enzymes Reveals Molecular Mechanisms Underlying Evolutionary Innovation through Gene Duplication
Cited by: 168
Author(s): Karin Voordeckers, Chris A. Brown, Kevin Vanneste, Elisa van der Zande, Arnout Voet, Steven Maere, Kevin J. Verstrepen
Software Mentions: 4
Published: almost 12 years ago

10.1371/journal.pone.0091241

Large-Scale Ichthyoplankton and Water Mass Distribution along the South Brazil Shelf
Cited by: 37
Author(s): Luis Carlos Pinto de Macedo-Soares, Carlos Alberto Eiras Garcia, Andréa S. Freire, Jose H Muelbert
Software Mentions: 3
Published: over 10 years ago

10.1093/aobpla/ply047

Phylogeography of an endangered disjunct herb: long-distance dispersal, refugia and colonization routes
Cited by: 10
Author(s): Javier Bobo‐Pinilla, Julio Peñas de Giles, Noemí López-González, Sonia Mediavilla, M. Montserrat Martínez‐Ortega
Software Mentions: 3
Published: about 6 years ago

10.1186/s12859-019-3019-7

HH-suite3 for fast remote homology detection and deep protein annotation
Cited by: 602
Author(s): Martin Steinegger, Markus Meier, Milot Mirdita, Harald Vöhringer, Stephan J. Haunsberger, Johannes Söding
Software Mentions: 3
Published: about 5 years ago

10.1186/s12859-017-1917-0

Cache and energy efficient algorithms for Nussinov’s RNA Folding
Cited by: 20
Author(s): Chenhao Zhao, Sartaj Sahni
Software Mentions: 3
Published: almost 7 years ago

10.7717/peerj.2044

Conditions during adulthood affect cohort-specific reproductive success in an Arctic-nesting goose population
Cited by: 5
Author(s): Mitch D. Weegman, Stuart Bearhop, Geoff M. Hilton, Alyn Walsh, Anthony D. Fox
Software Mentions: 3
Published: over 8 years ago

10.3390/genes12020254

Paracellular and Transcellular Leukocytes Diapedesis Are Divergent but Interconnected Evolutionary Events
Cited by: 20
Author(s): Michel‐Edwar Mickael, Norwin Kubick, Pavel Klimovich, Patrick Henckell Flournoy, Irmina Bieńkowska, Mariusz Sacharczuk
Software Mentions: 3
Published: over 3 years ago

10.1073/pnas.1811797116

Rivers across the Siberian Arctic unearth the patterns of carbon release from thawing permafrost
Cited by: 104
Author(s): Birgit Wild, August Andersson, Lisa Bröder, Jorien E. Vonk, Gustaf Hugelius, J. W. McClelland, Wenjun Song, Peter A. Raymond, Örjan Gustafsson
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-021-94396-x

Niche partitioning among dead wood-dependent beetles
Cited by: 1
Author(s): Jakub Horák
Software Mentions: 3
Published: over 3 years ago

10.1155/2009/745151

Analysis of Auditory Measures in Normal Hearing Young Male Adult Cigarette Smokers Using Multiple Variable Selection Methods with Predictive Validation Assessments
Cited by: 6
Author(s): Kamakshi V. Gopal, Richard Herrington, Jacquelin Pearce
Software Mentions: 2
Published: almost 16 years ago

10.3389/fninf.2015.00017

A reconfigurable visual-programming library for real-time closed-loop cellular electrophysiology
Cited by: 9
Author(s): István Bíró, Michèle Giugliano
Software Mentions: 2
Published: over 9 years ago

10.1186/s12859-015-0773-z

Phylogenomics and sequence-structure-function relationships in the GmrSD family of Type IV restriction enzymes
Cited by: 21
Author(s): Magdalena A. Machnicka, Katarzyna Kamińska, Stanisław Dunin-Horkawicz, Janusz M. Bujnicki
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0158717

Urban Bird Feeding: Connecting People with Nature
Cited by: 105
Author(s): Daniel T. Cox, Kevin J. Gaston
Software Mentions: 2
Published: over 8 years ago

10.3390/jcm9061682

What Is the Impact of Intraoperative Microscope-Integrated OCT in Ophthalmic Surgery? Relevant Applications and Outcomes. A Systematic Review
Cited by: 14
Author(s): Chiara Posarelli, Francesco Sartini, Giovanni Casini, Andrea Passani, Mario Damiano Toro, Giovanna Vella, Michele Figus
Software Mentions: 2
Published: over 4 years ago

10.3390/molecules19022247

In Silico Studies of Quinoxaline-2-Carboxamide 1,4-di-N-Oxide Derivatives as Antimycobacterial Agents
Cited by: 11
Author(s): A E Radwan, Wael M. Abdel‐Mageed
Software Mentions: 2
Published: over 10 years ago

10.1111/zph.12799

Towards One Health clinical management of zoonoses: A parallel survey of Australian general medical practitioners and veterinarians
Cited by: 11
Author(s): Sandra G. Steele, Robert Booy, Ramesh Manocha, Siobhan M. Mor, Jenny‐Ann L.M.L. Toribio
Software Mentions: 2
Published: almost 4 years ago

10.1093/conphys/cot025

Ovarian cycle activity varies with respect to age and social status in free-ranging elephants in Addo Elephant National Park, South Africa
Cited by: 9
Author(s): Elizabeth W. Freeman, Jordana M. Meyer, Sarah Putman, Bruce A. Schulte, Janine L. Brown
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pbio.1002392

Growth-Blocking Peptides As Nutrition-Sensitive Signals for Insulin Secretion and Body Size Regulation
Cited by: 100
Author(s): Takashi Kaburagi, Christen K. Mirth
Software Mentions: 2
Published: over 8 years ago

10.1007/s00267-021-01488-5

Precision, Applicability, and Economic Implications: A Comparison of Alternative Biodiversity Offset Indexes
Cited by: 4
Author(s): Johanna Kangas, Peter Kullberg, Minna Pekkonen, Janne S. Kotiaho, Markku Ollikainen
Software Mentions: 1
Published: over 3 years ago

10.1111/eva.12411

Physiological plasticity and local adaptation to elevated <scp>pCO</scp>2 in calcareous algae: an ontogenetic and geographic approach
Cited by: 35
Author(s): Jacqueline L. Padilla‐Gamiño, Juan Diego Gaitán‐Espitía, Morgan W. Kelly, Gretchen E. Hofmann
Software Mentions: 1
Published: about 8 years ago

10.3389/fped.2019.00411

Body Composition and Serum Total Calcium Were Associated With Blood Pressure Among Children and Adolescents Aged 7–18 in China: A Cross-Sectional Study
Cited by: 3
Author(s): Huijing He, Li Pan, Jian Du, Feng Liu, Yuming Jin, Jingang Ma, Li Wang, Pengben Jia, Zhiping Hu, Guangliang Shan
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1005464

Functional asymmetry and plasticity of electrical synapses interconnecting neurons through a 36-state model of gap junction channel gating
Cited by: 15
Author(s): Mindaugas Šnipas, Lina Rimkutė, Tadas Kraujalis, Kęstutis Maciūnas, Feliksas F. Bukauskas
Software Mentions: 1
Published: over 7 years ago

10.3389/fpubh.2020.00177

Smoking Prevalence, Patterns, and Cessation Among Adults in Hebei Province, Central China: Implications From China National Health Survey (CNHS)
Cited by: 20
Author(s): Huijing He, Li Pan, Ze Cui, Jixin Sun, Chengdong Yu, Yajing Cao, Ye Wang, Guangliang Shan
Software Mentions: 1
Published: over 4 years ago

10.1186/1745-6150-4-39

Identification of an ortholog of the eukaryotic RNA polymerase III subunit RPC34 in Crenarchaeota and Thaumarchaeota suggests specialization of RNA polymerases for coding and non-coding RNAs in Archaea
Cited by: 36
Author(s): Fabian Blombach, Kira S. Makarova, Jeannette Marrero, Bettina Siebers, Eugene V. Koonin, John van der Oost
Software Mentions: 1
Published: almost 16 years ago

10.1136/bmjophth-2018-000194

Detection and characterisation of optic nerve and retinal changes in primary congenital glaucoma using hand-held optical coherence tomography
Cited by: 14
Author(s): Anastasia Pilat, Sonal Shah, Viral Sheth, Ravi Purohit, Frank A Proudlock, Joseph A. Abbott, Irène Gottlob
Software Mentions: 1
Published: over 5 years ago

10.1186/s40942-017-0098-3

Parafoveolar retinoblastoma regression with foveal preservation following intra-arterial chemotherapy documented on hand-held optical coherence tomography in a newborn
Cited by: 6
Author(s): V.А. Yarovaya, Kareem Sioufi, Carol L. Shields
Software Mentions: 1
Published: almost 7 years ago

10.1097/IAE.0000000000002622

POTENTIAL UTILITY OF FOVEAL MORPHOLOGY IN PRETERM INFANTS MEASURED USING HAND-HELD OPTICAL COHERENCE TOMOGRAPHY IN RETINOPATHY OF PREMATURITY SCREENING
Cited by: 19
Author(s): Samira Anwar, Mintu Nath, Aarti Patel, Helena Lee, Samantha Brown, Irène Gottlob, Frank A Proudlock
Software Mentions: 1
Published: over 4 years ago

10.1186/1753-6561-5-S6-O68

Background and features of the WHO hand hygiene self-assessment framework
Cited by: 0
Author(s): Benedetta Allegranzi, AJ Stewardson, Linsday Grayson, Elaine Larson, Anne Coble Voss, Claire Kilpatrick, Didier Pittet
Software Mentions: 1
Published: over 13 years ago

10.7554/eLife.04132

A stress assembly that confers cell viability by preserving ERES components during amino-acid starvation
Cited by: 65
Author(s): Margarita Zacharogianni, A. Aguilera Gomez, Tineke Veenendaal, Jan Smout, Cathérine Rabouille
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-021-94495-9

Cerebral malaria: insight into pathology from optical coherence tomography
Cited by: 14
Author(s): Zhanhan Tu, Jack Gormley, Viral Sheth, Karl B. Seydel, Terrie E. Taylor, Nicholas A. V. Beare, Valentina Barrera, Frank A Proudlock, Chatonda Manda, Simon Harding, Irène Gottlob
Software Mentions: 1
Published: over 3 years ago

10.5334/aogh.2809

Research Capacity and Training Needs for Cancer in Conflict-Affected MENA Countries
Cited by: 6
Author(s): Zahi Abdul‐Sater, Elsa Kobeissi, Marilyne Menassa, Talar Telvizian, Deborah Mukherji
Software Mentions: 1
Published: almost 4 years ago

10.1107/S2052252518009223

De novoprotein structure determination by heavy-atom soaking in lipidic cubic phase and SIRAS phasing using serial synchrotron crystallography
Cited by: 10
Author(s): Sabine Botha, Daniela Baitan, Katharina Jungnickel, Dominik Oberthür, Carlo Schmidt, Stephan Stern, Max O. Wiedorn, Markus Perbandt, Henry N. Chapman, Christian Betzel
Software Mentions: 1
Published: about 6 years ago

10.12688/wellcomeopenres.16055.1

Household transmission of seasonal coronavirus infections: Results from the Flu Watch cohort study
Cited by: 6
Author(s): Sarah Beale, Dan Lewer, Robert W Aldridge, Anne M Johnson, Maria Zambon, Andrew Hayward, Ellen Fragaszy
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2019.00917

Estimating the Aboveground Carbon Density of Coniferous Forests by Combining Airborne LiDAR and Allometry Models at Plot Level
Cited by: 4
Author(s): Hao Hu, Weizhong Li, Xuan Zhao, Qingrui Chang, Pengxiang Zhao
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pgen.1001081

Mutation in the Gene Encoding Ubiquitin Ligase LRSAM1 in Patients with Charcot-Marie-Tooth Disease
Cited by: 59
Author(s): Duane L. Guernsey, Haiyan Jiang, Karen Bedard, Susan C. Evans, Meghan Ferguson, Makoto Matsuoka, Christine Macgillivray, Mathew Nightingale, Scott Perry, Andrea L. Rideout, Andrew Orr, Mark D. Ludman, David Skidmore, Timothy Benstead, Mark E. Samuels
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0186285

Benefits and challenges of incorporating citizen science into university education
Cited by: 52
Author(s): Nicola J. Mitchell, Maggie D. Triska, Andrea Liberatore, Linden Ashcroft, Richard Weatherill, Nancy Longnecker
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0005280

Application of Homozygosity Haplotype Analysis to Genetic Mapping with High-Density SNP Genotype Data
Cited by: 20
Author(s): Haiyan Jiang, Andrew Orr, Duane L. Guernsey, Johane Robitaille, Géraldine Asselin, Mark E. Samuels, Marie‐Pierre Dubé
Software Mentions: 1
Published: over 15 years ago

10.15252/msb.202010079

SARS‐CoV‐2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms
Cited by: 18
Author(s): Seán I. O’Donoghue, Andrea Schafferhans, Neblina Sikta, Christian Stolte, Sandeep Kaur, Bosco Ho, S. B. Anderson, James B. Procter, Christian Dallago, Nicola Bordin, Matt Adcock, Burkhard Rost
Software Mentions: 1
Published: about 3 years ago

10.1111/mcn.13052

Agroforestry diversity, indigenous food consumption and nutritional outcomes in Sauria Paharia tribal women of Jharkhand, India
Cited by: 12
Author(s): Suparna Ghosh-Jerath, Ridhima Kapoor, Archna Singh, Nilima Nilima, Shauna Downs, Gail Goldberg, Jessica Fanzo
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0117720

Early Functional Postoperative Therapy of Distal Radius Fracture with a Dynamic Orthosis: Results of a Prospective Randomized Cross-Over Comparative Study
Cited by: 13
Author(s): Fabian Stuby, Stefan Döbele, Schäffer Susanne-Dorothea, Simon M. Mueller, Atesch Ateschrang, Matthias Baumann, Derek Zieker
Software Mentions: 1
Published: over 9 years ago

10.1155/2016/6245609

Acute Mountain Sickness Symptoms Depend on Normobaric versus Hypobaric Hypoxia
Cited by: 12
Author(s): Dana M. DiPasquale, Gary E. Strangman, N. Stuart Harris, Stephen R. Muza
Software Mentions: 1
Published: almost 9 years ago

10.1186/1745-6150-4-29

Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements
Cited by: 208
Author(s): Kira S. Makarova, Yuri I. Wolf, John van der Oost, Eugene V. Koonin
Software Mentions: 1
Published: about 15 years ago

Projects: cran: HH

Papers Mentioning HH 55