Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: GHap

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/GHap

Genome-Wide Haplotyping
5 versions
Latest release: about 2 years ago
240 downloads last month

Papers Mentioning GHap 10

A combined GWAS approach reveals key loci for socially-affected traits in Yorkshire pigs
Cited by: 8
Author(s): Pingxian Wu, Kai Wang, Jie Zhou, Dejuan Chen, Anan Jiang, Yanzhi Jiang, Li Zhu, Xiaotian Qiu, Xuewei Li, Guoqing Tang
Software Mentions: 3
Published: about 3 years ago

10.1186/s12711-021-00633-2

Variants at the ASIP locus contribute to coat color darkening in Nellore cattle
Cited by: 21
Author(s): Beatriz Batista Trigo, Adam Taiti Harth Utsunomiya, Alvaro A. A. D. Fortunato, Marco Milanesi, Rafaela Beatriz Pintor Torrecilha, Harrison J. Lamb, Loan Nguyen, Elizabeth M. Ross, Ben J. Hayes, Romulo Cláudio Morozini Padula, Thayla Souza Sussai, Ludmilla Balbo Zavarez, Rafael Silva Cipriano, Maria Margareth Theodoro Caminhas, Flávia L. Lopes, Cassiano Pelle, Tosso Leeb, Danika L. Bannasch, Derek M. Bickhart, Timothy P. L. Smith, Tad S. Sonstegard, José Fernando Garcia, Yuri Tani Utsunomiya
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-017-17127-1

A PLAG1 mutation contributed to stature recovery in modern cattle
Cited by: 38
Author(s): Yuri Tani Utsunomiya, Marco Milanesi, Adam Taiti Harth Utsunomiya, Rafaela Beatriz Pintor Torrecilha, Eui-Soo Kim, M. S. Costa, Tamíris Sayuri Aguiar, Steven G. Schroeder, Adriana Santana do Carmo, Roberto Carvalheiro, Haroldo Henrique Rezende Neves, Romulo Cláudio Morozini Padula, Thayla Souza Sussai, Ludmilla Balbo Zavarez, Rafael Silva Cipriano, Maria Margareth Theodoro Caminhas, George Hambrecht, Licia Colli, Elisa Eufemi, Paolo Ajmone‐Marsan, Deneb Cesana, Marco Sannazaro, Maurizio Buora, Michèle Morgante, George E. Liu, Derek M. Bickhart, Curtis P. Van Tassell, Johann Sölkner, Tad S. Sonstegard, José Fernando Garcia
Software Mentions: 3
Published: almost 7 years ago

10.3390/genes12040534

Genetic Regulation of Biomarkers as Stress Proxies in Dairy Cows
Cited by: 3
Author(s): Marco Milanesi, Matilde Maria Passamonti, Katia Cappelli, Andrea Minuti, Valentino Palombo, Sandy Sgorlon, Stefano Capomaccio, Mariasilvia D’Andrea, Erminio Trevisi, Bruno Stefanon, J. L. Williams, Paolo Ajmone‐Marsan
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0201876

Genome-wide association study using haplotype alleles for the evaluation of reproductive traits in Nelore cattle
Cited by: 11
Author(s): André Vieira do Nascimento, Andrea Romero, Yuri Tani Utsunomiya, Adam Taiti Harth Utsunomiya, Diércles Francisco Cardoso, Haroldo Henrique Rezende Neves, Roberto Carvalheiro, José Fernando Garcia, Alexéia Barufatti
Software Mentions: 1
Published: about 6 years ago

10.1186/s12711-018-0414-x

Misidentification of runs of homozygosity islands in cattle caused by interference with copy number variation or large intermarker distances
Cited by: 30
Author(s): Wilson Nandolo, Yuri Tani Utsunomiya, Gábor Mészáros, María Wurzinger, Negar Khayadzadeh, Rafaela Beatriz Pintor Torrecilha, Henry Mulindwa, Timothy Gondwe, Patrik Waldmann, Maja Ferenčaković, José Fernando Garcia, Benjamin D. Rosen, Derek M. Bickhart, C. P. van Tassell, Ino Čurik, Johann Sölkner
Software Mentions: 1
Published: about 6 years ago

10.3390/genes11050551

Haplotype-Based Genome-Wide Association Study and Identification of Candidate Genes Associated with Carcass Traits in Hanwoo Cattle
Cited by: 12
Author(s): Swati Srivastava, Krishnamoorthy Srikanth, Sohyoung Won, Ju-Hwan Son, Jong-Eun Park, Woncheoul Park, Han-Ha Chai, Dajeong Lim
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2018.00627

Association of Copy Number Variation at Intron 3 of HMGA2 With Navel Length in Bos indicus
Cited by: 17
Author(s): Tamíris Sayuri Aguiar, Rafaela Beatriz Pintor Torrecilha, Marco Milanesi, Adam Taiti Harth Utsunomiya, Beatriz Batista Trigo, Abdulfatai Tijjani, Hassan Hussein Musa, Flávia L. Lopes, Paolo Ajmone‐Marsan, Roberto Carvalheiro, Haroldo Henrique de Rezende Neves, Adriana Santana do Carmo, Olivier Hanotte, Tad S. Sonstegard, José Fernando Garcia, Yuri Tani Utsunomiya
Software Mentions: 1
Published: almost 6 years ago

10.3389/fgene.2020.00134

Genomic Prediction Accuracy Using Haplotypes Defined by Size and Hierarchical Clustering Based on Linkage Disequilibrium
Cited by: 26
Author(s): Sohyoung Won, Jong-Eun Park, Ju-Hwan Son, Seung Hwan Lee, Byeong Ho Park, Mina Park, Won-Chul Park, Han-Ha Chai, Heebal Kim, Jungjae Lee, Dajeong Lim
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2018.00655

Putative Loci Causing Early Embryonic Mortality in Duroc Swine
Cited by: 3
Author(s): Chunyan Zhang, M. D. MacNeil, R. A. Kemp, Michael K. Dyck, Graham Plastow
Software Mentions: 1
Published: almost 6 years ago