cran: GAD | Projects | Ecosyste.ms: Papers

10.7717/peerj.8289

Substrate rugosity and temperature matters: patterns of benthic diversity at tropical intertidal reefs in the SW Atlantic
Cited by: 14
Author(s): Ana Carolina de Azevedo Mazzuco, Patricia Sarcinelli Stelzer, Ângelo F. Bernardino
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pone.0116095

ICan: An Integrated Co-Alteration Network to Identify Ovarian Cancer-Related Genes
Cited by: 9
Author(s): Yuanshuai Zhou, Yongjing Liu, Kening Li, Rui Zhang, Fujun Qiu, Ning Zhao, Yan Xu
Software Mentions: 6
Published: over 9 years ago

10.3389/fmicb.2021.656895

GABA Production by Human Intestinal Bacteroides spp.: Prevalence, Regulation, and Role in Acid Stress Tolerance
Cited by: 66
Author(s): Nize Otaru, Kun Ye, Denisa Mujezinovic, Laura Berchtold, Florentin Constancias, Fabián A. Cornejo, Adam Krzystek, Tomás de Wouters, Christian Braegger, Christophe Lacroix, Benoı̂t Pugin
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0217121

Removal of an established invader can change gross primary production of native macroalgae and alter carbon flow in intertidal rock pools
Cited by: 1
Author(s): Francesca Rossi, Rosa M. Viejo, Linney Duarte, Fátima Vaz-Pinto, Ignácio Gestoso, Celia Olabarria
Software Mentions: 5
Published: almost 5 years ago

10.1371/journal.pone.0207345

Understanding the sexual recruitment of one of the oldest and largest organisms on Earth, the seagrass Posidonia oceanica
Cited by: 12
Author(s): Laura Guerrero‐Meseguer, Carlos Sanz‐Lázaro, Antonio Riquelme Marín
Software Mentions: 4
Published: almost 6 years ago

10.3389/fimmu.2021.709466

Human Placental Trophoblasts Infected by Listeria monocytogenes Undergo a Pro-Inflammatory Switch Associated With Poor Pregnancy Outcomes
Cited by: 15
Author(s): Lauren J. Johnson, Siavash Azari, Amy Webb, Xiaoli Zhang, Mikhail A. Gavrilin, James L. Marshall, Kara M. Rood, Stéphanie Seveau
Software Mentions: 4
Published: over 3 years ago

10.3389/fcell.2015.00028

How to build personalized multi-omics comorbidity profiles
Cited by: 46
Author(s): Mohammad Ali Moni, Píetro Lió
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pone.0043557

Exploiting Protein-Protein Interaction Networks for Genome-Wide Disease-Gene Prioritization
Cited by: 87
Author(s): Emre Güney, Baldo Oliva
Software Mentions: 3
Published: about 12 years ago

10.1186/s12859-019-3106-9

The translational network for metabolic disease – from protein interaction to disease co-occurrence
Cited by: 5
Author(s): Yonghyun Nam, Dong-Gi Lee, Sunjoo Bang, Ju Han Kim, Jae-Hoon Kim, Hyunjung Shin
Software Mentions: 3
Published: almost 5 years ago

10.3389/fbioe.2014.00088

Discovery of Proteinâ€“lncRNA Interactions by Integrating Large-Scale CLIP-Seq and RNA-Seq Datasets
Cited by: 55
Author(s): Junhao Li, Shun Liu, Ling‐Ling Zheng, Jie Wu, Wenju Sun, Zelin Wang, Hui Zhou, Liang‐Hu Qu, Jianhua Yang
Software Mentions: 3
Published: almost 10 years ago

10.3389/fimmu.2020.550250

Analysis of Spatial Organization of Suppressive Myeloid Cells and Effector T Cells in Colorectal Cancer—A Potential Tool for Discovering Prognostic Biomarkers in Clinical Research
Cited by: 11
Author(s): Natalie Zwing, Henrik Failmezger, Chia-Huey Ooi, Derrek P. Hibar, Marta Cañamero, Bruno Gomes, Fabien Gaire, Konstanty Korski
Software Mentions: 3
Published: about 4 years ago

10.3389/fonc.2021.656675

Inferring Cell Subtypes and LncRNA Function by a Cell-Specific CeRNA Network in Breast Cancer
Cited by: 2
Author(s): Xin Chen, Jing Xu, Feng Zeng, Chao Yang, Weijun Sun, Yu Tao, Haokun Zhang, Li Yan
Software Mentions: 3
Published: over 3 years ago

10.1186/1752-0509-7-S5-S10

GeneTopics - interpretation of gene sets via literature-driven topic models
Cited by: 6
Author(s): Vicky Wang, Li Xi, Ahmed Enayetallah, Eric B. Fauman, Daniel Ziemek
Software Mentions: 3
Published: almost 12 years ago

10.3389/fphar.2020.592903

A Mechanism of Action Study on Danggui Sini Decoction to Discover Its Therapeutic Effect on Gastric Cancer
Cited by: 8
Author(s): Bo Pan, Yun Wang, Chunnuan Wu, Junrong Jia, Can Huang, Shumin Fang, Liren Liu
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12859-017-1467-5

Identifying miRNA sponge modules using biclustering and regulatory scores
Cited by: 21
Author(s): Junpeng Zhang, Thuc Duy Le, Lin Liu, Jiuyong Li
Software Mentions: 3
Published: over 7 years ago

10.3390/molecules23040736

Facilitating Anti-Cancer Combinatorial Drug Discovery by Targeting Epistatic Disease Genes
Cited by: 12
Author(s): Quan Yuan, Meng‐Yuan Liu, Ye-Mao Liu, Lida Zhu, Yu-Shan Wu, Zhihui Luo, Xiuzhen Zhang, Shizhong Xu, Qingyong Yang, Hongyu Zhang
Software Mentions: 3
Published: over 6 years ago

10.7717/peerj.1795

The effects of an invasive seaweed on native communities vary along a gradient of land-based human impacts
Cited by: 15
Author(s): Fabio Bulleri, Fabio Badalamenti, Ljiljana Iveša, Barbara Mikac, Luigi Musco, Andrej Jaklin, Alex Rattray, Tomás Vega Fernández, Lisandro Benedetti‐Cecchi
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0224477

Are we ready for scaling up restoration actions? An insight from Mediterranean macroalgal canopies
Cited by: 21
Author(s): Laura Tamburello, Loredana Papa, Giuseppe Guarnieri, Laura Basconi, Serena Zampardi, Maria Beatrice Scipione, Antonio Terlizzi, Valerio Zupo, Simonetta Fraschetti
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-57257-2

Postprandial Metabolism is Impaired in Overweight Normoglycemic Young Adults without Family History of Diabetes
Cited by: 20
Author(s): Ashok Kumar, Gopika Satheesh, G. Vijayakumar, Mahesh Chandran, Priya R. Prabhu, Leena Simon, V. Raman Kutty, Kartha Cc, Abdul Jaleel
Software Mentions: 3
Published: almost 5 years ago

10.18632/oncotarget.9030

GCGene: a gene resource for gastric cancer with literature evidence
Cited by: 1
Author(s): Min Zhao, Luming Chen, Yining Liu, Hong Qu
Software Mentions: 3
Published: over 8 years ago

10.1002/advs.201800640

MaxMIF: A New Method for Identifying Cancer Driver Genes through Effective Data Integration
Cited by: 24
Author(s): Yingnan Hou, Bo Gao, Guojun Li, Zhengchang Su
Software Mentions: 3
Published: over 6 years ago

10.1093/gigascience/giy035

m6ASNP: a tool for annotating genetic variants by m6A function
Cited by: 32
Author(s): Shuai Jiang, Yubin Xie, Zhan He, Zhang Ya, Yuli Zhao, Li Chen, Yueyuan Zheng, Yanyan Miao, Zhixiang Zuo, Jian Ren
Software Mentions: 2
Published: over 6 years ago

10.3390/md15100331

Growth, Toxin Production and Allelopathic Effects of Pseudo-nitzschia multiseries under Iron-Enriched Conditions
Cited by: 14
Author(s): Bruna Fernanda Sobrinho, Luana Mocelin de Camargo, Leonardo Sandrini-Neto, Cristian Rafael Kleemann, Eunice da Costa Machado, Luiz L. Mafra
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0114903

An Integrative Computational Approach for Prioritization of Genomic Variants
Cited by: 7
Author(s): Inna Dubchak, Sandhya Balasubramanian, Sheng Wang, Cem Meyden, Dinanath Sulakhe, Alexander Poliakov, Daniela Börnigen, Bingqing Xie, Andrew Taylor, Jianzhu Ma, Alex R. Paciorkowski, Ghayda Mirzaa, Paul Dave, Gady Agam, Jinbo Xu, Lihadh Al‐Gazali, Christopher E. Mason, M. Elizabeth Ross, Natalia Maltsev, T. Conrad Gilliam
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12859-018-2463-0

DLAD4U: deriving and prioritizing disease lists from PubMed literature
Cited by: 1
Author(s): Junhui Shen, Suhas Vasaikar, Fangfang Zhang
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0042573

CDA: Combinatorial Drug Discovery Using Transcriptional Response Modules
Cited by: 58
Author(s): Ji Hyun Lee, Dae Gyu Kim, Taejeong Bae, Kyoohyoung Rho, Ji Tae Kim, Jong Jun Lee, Yeongjun Jang, Byung Cheol Kim, Kyoung Mii Park, Sung Hoon Kim
Software Mentions: 2
Published: over 12 years ago

10.7717/peerj.4441

Benthic macrofaunal structure and secondary production in tropical estuaries on the Eastern Marine Ecoregion of Brazil
Cited by: 29
Author(s): Lorena B Bissoli, Ângelo F. Bernardino
Software Mentions: 2
Published: over 6 years ago

10.1038/srep30607

Climate extremes can drive biological assemblages to early successional stages compared to several mild disturbances
Cited by: 19
Author(s): Carlos Sanz‐Lázaro
Software Mentions: 2
Published: about 8 years ago

10.1186/1755-8794-3-1

Systematic analysis, comparison, and integration of disease based human genetic association data and mouse genetic phenotypic information
Cited by: 104
Author(s): Yonqing Zhang, Supriyo De, John Garner, Kirstin Smith, S Alex Wang, Kevin G. Becker
Software Mentions: 2
Published: almost 15 years ago

10.1371/journal.pone.0077704

The Importance of Vertical and Horizontal Dimensions of the Sediment Matrix in Structuring Nematodes Across Spatial Scales
Cited by: 14
Author(s): Danilo Cândido Vieira, Gustavo Fonseca
Software Mentions: 2
Published: about 11 years ago

10.1093/database/bav028

DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes
Cited by: 762
Author(s): Janet Piñero, Núria Queralt-Rosiñach, Àlex Bravo, Jordi Deu-Pons, Anna Bauer-Mehren, Martín Baron, Ferrán Sanz, Laura I. Furlong
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2105-16-S6-S4

Computational algorithms to predict Gene Ontology annotations
Cited by: 23
Author(s): Pietro Pinoli, Davide Chicco, Marco Masseroli
Software Mentions: 2
Published: over 9 years ago

10.3390/s21051594

Follow the Trail: Machine Learning for Fraud Detection in Fintech Applications
Cited by: 17
Author(s): Branka Stojanović, Josip Božić, Katharina Hofer-Schmitz, Kai Nahrgang, Andreas Weber, Atta Badii, Maheshkumar Sundaram, Elliot Jordan, Joel Runevic
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0084639

Discovering Implicit Entity Relation with the Gene-Citation-Gene Network
Cited by: 23
Author(s): Min Song, Nam Gi Han, Yong Hwan Kim, Ying Ding, Tamy Chambers
Software Mentions: 2
Published: almost 11 years ago

10.1186/1745-6215-14-386

A randomised trial of adaptive pacing therapy, cognitive behaviour therapy, graded exercise, and specialist medical care for chronic fatigue syndrome (PACE): statistical analysis plan
Cited by: 19
Author(s): Rebecca Walwyn, Laura Potts, Paul McCrone, Anthony L. Johnson, Julia DeCesare, Hannah Baber, Kimberley Goldsmith, Michael Sharpe, Trudie Chalder, Peter D White
Software Mentions: 2
Published: almost 12 years ago

10.3389/fpsyt.2021.665019

Prevalence of Mental Disorders in the WHO Eastern Mediterranean Region: A Systematic Review and Meta-Analysis
Cited by: 15
Author(s): Alina Zuberi, Ahmed Waqas, Naveed Sattar, Mahbub Hossain, Atıf Rahman, Khalid Saeed, Daniela C. Fuhr
Software Mentions: 2
Published: over 3 years ago

10.1186/1471-2350-11-14

Modeling complex genetic and environmental influences on comorbid bipolar disorder with tobacco use disorder
Cited by: 26
Author(s): Richard C. McEachin, Nancy L. Saccone, Scott F. Saccone, Yelena D Kleyman-Smith, Tiara Kar, Rajesh K Kare, Alex Ade, Maureen A. Sartor, James D. Cavalcoli, Melvin G. McInnis
Software Mentions: 2
Published: almost 15 years ago

10.1155/2014/170289

Clinic-Genomic Association Mining for Colorectal Cancer Using Publicly Available Datasets
Cited by: 5
Author(s): Fang Liu, Feng Yi, Zhenye Li, Chao Pan, Yuncong Su, Rui Yang, Lei Song, Huilong Duan, Ning Deng
Software Mentions: 2
Published: almost 11 years ago

10.3389/fpubh.2016.00126

The Roles of Financial Threat, Social Support, Work Stress, and Mental Distress in Dairy Farmers’ Expectations of Injury
Cited by: 27
Author(s): Emilia Furey, Denis O’Hora, John McNamara, Stephen Kinsella, Chris Noone
Software Mentions: 2
Published: over 8 years ago

10.1186/1472-6947-13-S1-S3

Finding type 2 diabetes causal single nucleotide polymorphism combinations and functional modules from genome-wide association data
Cited by: 5
Author(s): Chang Soo Kang, Hyeonseung Yu, Gwan‐Su Yi
Software Mentions: 2
Published: over 11 years ago

10.1186/s12888-020-02831-6

Emotion reactivity-related brain network analysis in generalized anxiety disorder: a task fMRI study
Cited by: 12
Author(s): Jian Li, Yuan Zhong, Zijuan Ma, Yun Wu, Manlong Pang, Chiyue Wang, Na Liu, Chun Wang, Ning Zhang
Software Mentions: 2
Published: about 4 years ago

10.1186/gb-2008-9-12-r170

FitSNPs: highly differentially expressed genes are more likely to have variants associated with disease
Cited by: 75
Author(s): Rongrong Chen, Alex Morgan, Joel T. Dudley, Tarangini Deshpande, Li Li, Keiichi Kodama, An‐Jen Chiang, Atul J. Butte
Software Mentions: 2
Published: almost 17 years ago

10.1371/journal.pone.0038828

Segment-Wise Genome-Wide Association Analysis Identifies a Candidate Region Associated with Schizophrenia in Three Independent Samples
Cited by: 5
Author(s): Thomas Gladwin, Eske M. Derks, Genetic Risk, Marcella Rietschel, Manuel Mattheisen, René Breuer, Thomas G. Schulze, Markus M. Nöthen, Douglas F. Levinson, Jianxin Shi, Pablo V. Gejman, Sven Cichon, Roel A. Ophoff
Software Mentions: 1
Published: over 12 years ago

10.1016/j.dib.2016.07.022

Data and programs in support of network analysis of genes and their association with diseases
Cited by: 5
Author(s): Panagiota I. Kontou, Athanasia Pavlopoulou, Niki Dimou, Georgios A. Pavlopoulos, Pantelis G. Bagos
Software Mentions: 1
Published: about 8 years ago

10.1016/j.dib.2020.105439

GOLD standard dataset for Alzheimer genes
Cited by: 1
Author(s): Sushrutha Raj, Anchal Vishnoi, Alok Srivastava
Software Mentions: 1
Published: over 4 years ago

10.3390/e20060419

Multivariate Matching Pursuit Decomposition and Normalized Gabor Entropy for Quantification of Preictal Trends in Epilepsy
Cited by: 5
Author(s): Rui Liu, Bharat K. Karumuri, Joshua A. Adkinson, T. Noah Hutson, Ioannis Vlachos, Leonidas D. Iasemidis
Software Mentions: 1
Published: over 6 years ago

10.1155/2018/7043402

A Network Pharmacology Approach to Uncover the Mechanisms of Shen-Qi-Di-Huang Decoction against Diabetic Nephropathy
Cited by: 13
Author(s): Di Sha, Han Chieh Lin, Qing Wang, Xinkui Liu, Yingying Yang, Fan Liu, Linhua Zhao, Xiaolin Tong
Software Mentions: 1
Published: about 6 years ago

10.3389/fgene.2020.606940

MiRNA-Mediated Subpathway Identification and Network Module Analysis to Reveal Prognostic Markers in Human Pancreatic Cancer
Cited by: 2
Author(s): Yuejuan Liu, Yuxia Cui, Xuefeng Bai, Chenchen Feng, Meng Li, Xiaole Han, Bo Ai, Jian Zhang, Xuecang Li, Junwei Han, Jiang Zhu, Yong Jiang, Qi Pan, Fan Wang, Mingcong Xu, Chunquan Li, Qiuyu Wang
Software Mentions: 1
Published: almost 4 years ago

10.3389/fnins.2019.00779

Exploring the Potential Role of Rosmarinic Acid in Neuronal Differentiation of Human Amnion Epithelial Cells by Microarray Gene Expression Profiling
Cited by: 18
Author(s): Farhana Ferdousi, Kazunori Sasaki, Yoshiaki Uchida, Nobuhiro Ohkohchi, Yun‐Wen Zheng, Hiroko Isoda
Software Mentions: 1
Published: over 5 years ago

10.3389/fonc.2020.01601

Schwann Cell Stimulation of Pancreatic Cancer Cells: A Proteomic Analysis
Cited by: 14
Author(s): Aysha Ferdoushi, Xiang Li, Nathan Griffin, Sam Faulkner, M Fairuz B Jamaluddin, Fangfang Gao, Chen Chen Jiang, Dirk F. van Helden, Pradeep S. Tanwar, Phillip Jobling, Hubert Hondermarck
Software Mentions: 1
Published: about 4 years ago

10.3389/fpsyg.2020.550533

Psychometric Properties of the Generalized Anxiety Disorder-7 and Generalized Anxiety Disorder-Mini in United States University Students
Cited by: 29
Author(s): Carol Byrd‐Bredbenner, K. Eck, Virginia Quick
Software Mentions: 1
Published: about 4 years ago

10.3389/fpsyg.2020.01465

The Complex Role of Mental Time Travel in Depressive and Anxiety Disorders: An Ensemble Perspective
Cited by: 4
Author(s): Ronald T. Kellogg, Cristina A. Chirino, Jeffrey D. Gfeller
Software Mentions: 1
Published: over 4 years ago

10.3389/fpubh.2016.00193

The Use of Signal-Transduction and Metabolic Pathways to Predict Human Disease Targets from Electric and Magnetic Fields Using in vitro Data in Human Cell Lines
Cited by: 2
Author(s): Fred Parham, Christopher J. Portier, Xiaoqing Chang, Meike Mevissen
Software Mentions: 1
Published: about 8 years ago

10.3390/genes11111330

Comparative Review of the Responses of Listeria monocytogenes and Escherichia coli to Low pH Stress
Cited by: 38
Author(s): Talia Arcari, Marie-Lucie Feger, Duarte Guerreiro, Jialun Wu, Conor O’Byrne
Software Mentions: 1
Published: almost 4 years ago

10.3390/jcm10010023

Real-World Safety of CFTR Modulators in the Treatment of Cystic Fibrosis: A Systematic Review
Cited by: 56
Author(s): Renée Dagenais, Victoria Su, Bradley S. Quon
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.ppat.1008488

Identification of functional cis-acting RNA elements in the hepatitis E virus genome required for viral replication
Cited by: 22
Author(s): Xiaohui Ju, Guangtao Xiang, Mingli Gong, Rui Yang, Jierui Qin, Yafei Li, Yuchen Nan, Yonglin Yang, Qiangfeng Cliff Zhang, Qiang Ding
Software Mentions: 1
Published: over 4 years ago

10.1017/S0033291716001082

Predicting the diagnosis of autism in adults using the Autism-Spectrum Quotient (AQ) questionnaire
Cited by: 117
Author(s): Karen Ashwood, Nicola Gillan, Jamie Horder, Hannah Hayward, Emma Woodhouse, Fiona McEwen, James Findon, Hanna Eklund, Deborah Spain, C. Ellie Wilson, Tim Cadman, Susan Young, Vladimira Stoencheva, Clodagh Murphy, Dene Robertson, Tony Charman, Patrick Bolton, Karen Glaser, Philip Asherson, Emily Simonoff, Declan Murphy
Software Mentions: 1
Published: over 8 years ago

10.1017/S0033291716002786

A trans-diagnostic perspective on obsessive-compulsive disorder
Cited by: 111
Author(s): Claire M. Gillan, Naomi Fineberg, Trevor W. Robbins
Software Mentions: 1
Published: over 7 years ago

10.1038/srep10727

Maximal Holevo Quantity Based on Weak Measurements
Cited by: 3
Author(s): Yao-Kun Wang, Shao-Ming Fei, Zhi‐Xi Wang, Junpeng Cao, Heng Fan
Software Mentions: 1
Published: over 9 years ago

10.1038/srep43258

GenePANDA—a novel network-based gene prioritizing tool for complex diseases
Cited by: 17
Author(s): Tianshu Yin, Shu Chen, Xiaohui Wu, Weidong Tian
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-03039-7

TCM-Mesh: The database and analytical system for network pharmacology analysis for TCM preparations
Cited by: 142
Author(s): Run-zhi Zhang, Shaojun Yu, Hong Bai, Kang Ning
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-16710-w

Investigating quantum metrology in noisy channels
Cited by: 9
Author(s): Babatunde J. Falaye, Adenike Grace Adepoju, Abubakar Sadiq Aliyu, Magdalena Marciano Melchor, Muhammad Sanusi Liman, O. J. Oluwadare, Marlon David González Ramírez, K. J. Oyewumi
Software Mentions: 1
Published: almost 7 years ago

10.1186/1745-6215-14-76

The Y-Worri Project: study protocol for a randomised controlled trial
Cited by: 10
Author(s): Alison L. Calear, Helen Christensen, Kathleen M Griffiths, Andrew Mackinnon
Software Mentions: 1
Published: almost 12 years ago

10.1007/s00190-015-0852-y

Observed changes in the Earth’s dynamic oblateness from GRACE data and geophysical models
Cited by: 14
Author(s): Yu Sun, Pavel Ditmar, Riccardo Riva
Software Mentions: 1
Published: about 9 years ago

10.1186/s13033-016-0053-y

Erratic electricity supply (Dumsor) and anxiety disorders among university students in Ghana: a cross sectional study
Cited by: 10
Author(s): Abdallah Ibrahim, Genevieve Cecilia Aryeetey, Emmanuel Asampong, Duah Dwomoh, Justice Nonvignon
Software Mentions: 1
Published: over 8 years ago

10.2196/11981

Guided Digital Cognitive Behavioral Program for Anxiety in Primary Care: Propensity-Matched Controlled Trial
Cited by: 10
Author(s): Megan Oser, Meredith L. Wallace, Francis X. Solano, Eva Szigethy
Software Mentions: 1
Published: over 5 years ago

10.2196/resprot.4783

The Feasibility, Acceptability, and Efficacy of Delivering Internet-Based Self-Help and Guided Self-Help Interventions for Generalized Anxiety Disorder to Indian University Students: Design of a Randomized Controlled Trial
Cited by: 8
Author(s): Nitya Kanuri, Michelle G. Newman, Josef I. Ruzek, Eric Kuhn, M Manjula, Megan Jones, Neil Thomas, Jo Abbott, Smita Sharma, C Taylor
Software Mentions: 1
Published: almost 9 years ago

10.18632/oncotarget.20256

An analysis of the gene interaction networks identifying the role of PARP1 in metastasis of non-small cell lung cancer
Cited by: 12
Author(s): Kai Chen, Yajie Li, Hui Xu, Chunfeng Zhang, Zhiqiang Li, Wei Wang, Baofeng Wang
Software Mentions: 1
Published: about 7 years ago

10.18632/oncotarget.21064

A long non-coding RNA expression signature to predict survival of patients with colon adenocarcinoma
Cited by: 20
Author(s): Handong Wang, Jingwen Li, Fan Wang, Peng Han, Yanlong Liu, Binbin Cui
Software Mentions: 1
Published: about 7 years ago

10.18632/aging.202622

Chemical composition and pharmacological mechanism of ephedra-glycyrrhiza drug pair against coronavirus disease 2019 (COVID-19)
Cited by: 29
Author(s): Xiaoling Li, Qingtao Qiu, Mingyue Li, Haowen Lin, Shi‐Lin Cao, Qu Wang, Zishi Chen, Wenhao Jiang, Wen Zhang, Yuge Huang, Hui Luo, Lianxiang Luo
Software Mentions: 1
Published: over 3 years ago

10.1192/bjb.2017.12

Against the Stream: Generalised anxiety disorder (GAD) – a redundant diagnosis
Cited by: 6
Author(s): Peter Tyrer
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2105-10-S2-S14

The "etiome": identification and clustering of human disease etiological factors
Cited by: 42
Author(s): Yueyi I Liu, Paul H. Wise, Atul J. Butte
Software Mentions: 1
Published: almost 16 years ago

10.1186/1471-2105-10-278

Genephony: a knowledge management tool for genome-wide research
Cited by: 8
Author(s): Angelo Nuzzo, Alberto Riva
Software Mentions: 1
Published: about 15 years ago

10.1186/1471-2105-7-325

The Autoimmune Disease Database: a dynamically compiled literature-derived database
Cited by: 33
Author(s): Thomas Karopka, Juliane Fluck, Heinz Theodor Mevissen, Änne Glass
Software Mentions: 1
Published: over 18 years ago

10.1186/s12859-016-1131-5

A method for exploring implicit concept relatedness in biomedical knowledge network
Cited by: 10
Author(s): Tian Bai, Liang Gong, Ye Wang, Yan Wang, Casimir A. Kulikowski, Lan Huang
Software Mentions: 1
Published: over 8 years ago

10.1186/s12859-015-0550-z

Visual analysis of biological data-knowledge networks
Cited by: 31
Author(s): Corinna Vehlow, David P. Kao, Michael R. Bristow, Lawrence Hunter, Daniel Weiskopf, Carsten Görg
Software Mentions: 1
Published: over 9 years ago

10.1186/s12859-015-0472-9

Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research
Cited by: 174
Author(s): Àlex Bravo, Janet Piñero, Núria Queralt-Rosiñach, Michael Rautschka, Laura I. Furlong
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2105-13-S15-S2

PAGED: a pathway and gene-set enrichment database to enable molecular phenotype discoveries
Cited by: 20
Author(s): Hui Huang, Xiaogang Wu, Madhankumar Sonachalam, Sammed N. Mandape, Ragini Pandey, Karl F. MacDorman, Wan Park, Jake Y. Chen
Software Mentions: 1
Published: about 12 years ago

10.1186/1471-2105-15-152

LincSNP: a database of linking disease-associated SNPs to human large intergenic non-coding RNAs
Cited by: 46
Author(s): Shangwei Ning, Zhenqun Zhao, Jingrun Ye, Peng Wang, Hui Zhi, Ronghong Li, Tingting Wang, Xia Li
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2105-10-S15-S9

HypertenGene: extracting key hypertension genes from biomedical literature with position and automatically-generated template features
Cited by: 14
Author(s): Richard Tzong-Han Tsai, Po‐Ting Lai, Hong-Jie Dai, Chi-Hsin Huang, Yue-Yang Bow, Yen-Ching Chang, Wen‐Harn Pan, Wen-Lian Hsu
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12864-015-1481-9

Characterization and identification of hidden rare variants in the human genome
Cited by: 22
Author(s): Alberto Magi, Romina D’Aurizio, Flavia Palombo, Ingrid Cifola, Lorenzo Tattini, Roberto Semeraro, Tommaso Pippucci, Betti Giusti, Giovanni Romeo, Rosanna Abbate, Gian Franco Gensini
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2164-12-55

Recent human evolution has shaped geographical differences in susceptibility to disease
Cited by: 28
Author(s): Urko M. Marigorta, Oscar Lao, Ferrán Casals, Francesc Calafell, Carlos Morcillo-Suárez, Rui Faria, Elena Bosch, François Serra, Jaume Bertranpetit, Hernán Dopazo, Arcadi Navarro
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-13-S8-S20

GLAD4U: deriving and prioritizing gene lists from PubMed literature
Cited by: 106
Author(s): Jérôme Jourquin, Dexter T. Duncan, Zhiao Shi, Bing Zhang
Software Mentions: 1
Published: almost 12 years ago

10.1186/1755-8794-8-S2-S7

Detection and analysis of disease-associated single nucleotide polymorphism influencing post-translational modification
Cited by: 27
Author(s): Yul Kim, Chang Soo Kang, Bumki Min, Gwan‐Su Yi
Software Mentions: 1
Published: over 9 years ago

10.1186/s12920-019-0609-1

Significant random signatures reveals new biomarker for breast cancer
Cited by: 2
Author(s): Elnaz Saberi Ansar, Changiz Eslahchii, Mahsa Rahimi, Lobat Geranpayeh, Marzieh Ebrahimi, Rosa Aghdam, Gwenneg Kerdivel
Software Mentions: 1
Published: about 5 years ago

10.1186/s12920-017-0315-9

Measuring disease similarity and predicting disease-related ncRNAs by a novel method
Cited by: 40
Author(s): Yang Hu, Meng Zhou, Hang Shi, Hong Ju, Qinghua Jiang, Cheng Liang
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-244X-14-98

The relationships between perfectionism, pathological worry and generalised anxiety disorder
Cited by: 40
Author(s): Alicia K. Handley, Sarah J. Egan, Robert Kane, Clare S. Rees
Software Mentions: 1
Published: over 10 years ago

10.1186/1756-0500-6-511

OGA: an ontological tool of human phenotypes with genetic associations
Cited by: 1
Author(s): J. Enrique Herrera-Galeano, David L. Hirschberg, Vishwesh Mokashi, Jeffrey L. Solka
Software Mentions: 1
Published: almost 11 years ago

10.1186/1752-0509-3-46

Genetic and environmental pathways to complex diseases
Cited by: 70
Author(s): Julia M. Gohlke, Reuben Thomas, Yonqing Zhang, Michael C. Rosenstein, Allan Peter Davis, Cynthia G. Murphy, Kevin G. Becker, Carolyn J. Mattingly, Christopher J. Portier
Software Mentions: 1
Published: over 15 years ago

10.1186/1752-0509-7-122

Functional analysis of microRNA and transcription factor synergistic regulatory network based on identifying regulatory motifs in non-small cell lung cancer
Cited by: 25
Author(s): Kening Li, Zihui Li, Ning Zhao, Yaoqun Xu, Yongjing Liu, Yuanshuai Zhou, Desi Shang, Fujun Qiu, Rui Zhang, Zhiqiang Chang, Yan Xu
Software Mentions: 1
Published: about 11 years ago

Projects: cran: GAD

Papers Mentioning GAD 111