cran: GA | Projects | Ecosyste.ms: Papers

10.7717/peerj-cs.370

An integrated cuckoo search optimizer for single and multi-objective optimization problems
Cited by: 3
Author(s): Xiangbo Qi, Zhaohui Yuan, Yan Song
Software Mentions: 3
Published: about 3 years ago

Identification and profiling of novel microRNAs in the Brassica rapagenome based on small RNA deep sequencing
Cited by: 36
Author(s): Bumjin Kim, Hee‐Ju Yu, Sin‐Gi Park, Ja Young Shin, Min Seok Oh, Namshin Kim, Jeong‐Hwan Mun
Software Mentions: 2
Published: over 11 years ago

10.1186/1471-2105-12-454

miREE: miRNA recognition elements ensemble
Cited by: 33
Author(s): Paula H. Reyes-Herrera, Elisa Ficarra, Andrea Acquaviva, Enrico Macii
Software Mentions: 2
Published: over 12 years ago

10.1186/gb-2009-10-9-r94

De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data
Cited by: 141
Author(s): Scott DiGuistini, Nancy Liao, Darren Platt, Gordon Robertson, Michael Seidel, Simon K. Chan, T. Roderick Docking, İnanç Birol, Robert A. Holt, Martin Hirst, Elaine R. Mardis, Marco A. Marra, Richard Hamelin, Jörg Bohlmann, Colette Breuil, Steven J.M. Jones
Software Mentions: 2
Published: over 15 years ago

10.1186/1471-2105-12-152

ZFN-Site searches genomes for zinc finger nuclease target sites and off-target sites
Cited by: 41
Author(s): Thomas J. Cradick, Giovanna Ambrosini, Christian Iseli, Philipp Bücher, Anton P. McCaffrey
Software Mentions: 2
Published: about 13 years ago

10.1186/gb-2011-12-10-r104

High-throughput RNA interference screening using pooled shRNA libraries and next generation sequencing
Cited by: 106
Author(s): David Sims, Ana M. Mendes-Pereira, Jessica Frankum, Darren J. Burgess, Maria-Antonietta Cerone, C. Lombardelli, Costas Mitsopoulos, Jarle Hakas, Nirupa Murugaesu, Clare M. Isacke, Kerry Fenwick, Ioannis Assiotis, Iwanka Kozarewa, Marketa Zvelebil, Alan Ashworth, Christopher J. Lord
Software Mentions: 2
Published: over 13 years ago

10.1186/s12866-017-1101-8

A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome
Cited by: 173
Author(s): Imane Allali, Jason W. Arnold, Jeffrey Roach, María Belén Cadenas, Natasha Butz, Hosni M. Hassan, Matthew D. Koci, Anne Ballou, Mary Mendoza, Rizwana Ali, M. Andrea Azcárate-Peril
Software Mentions: 2
Published: over 6 years ago

10.3389/fpls.2016.00905

Gibberellin-Stimulation of Rhizome Elongation and Differential GA-Responsive Proteomic Changes in Two Grass Species
Cited by: 10
Author(s): Xiqing Ma, Bingru Huang
Software Mentions: 2
Published: almost 8 years ago

10.3390/ani11082345

Precision Agriculture for Crop and Livestock Farming—Brief Review
Cited by: 49
Author(s): António Monteiro, Sérgio Ribeiro dos Santos, Pedro Gonçalves
Software Mentions: 2
Published: almost 3 years ago

10.3389/fnins.2017.00701

Decreased Power but Preserved Bursting Features of Subthalamic Neuronal Signals in Advanced Parkinson's Patients under Controlled Desflurane Inhalation Anesthesia
Cited by: 11
Author(s): Sheng Huang Lin, Hsin Yi Lai, Yu Chun Lo, Chin Chou, Yi Ting Chou, Shih-Hung Yang, İbrahim Sun, Bo Wei Chen, Ching Fu Wang, Guan Tze Liu, Fu Shan Jaw, Shin-Yuan Chen, You Yin Chen
Software Mentions: 2
Published: over 6 years ago

10.3389/fneur.2019.00358

Smartphone Level Test Measures Disability in Several Neurological Domains for Patients With Multiple Sclerosis
Cited by: 18
Author(s): Alexandra Boukhvalova, Olivia Fan, Ann Marie Weideman, Thomas K. Harris, Emily Kowalczyk, Linh Pham, Péter Kósa, Bibiana Bielekova
Software Mentions: 2
Published: almost 5 years ago

10.3389/fpls.2019.01548

Hand-Held Near-Infrared Spectroscopy for Authentication of Fengdous and Quantitative Analysis of Mulberry Fruits
Cited by: 22
Author(s): Hui Yan, Yongde Xu, Heinz W. Siesler, Han Baoyu, Guozheng Zhang
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2018.00714

mlDEEPre: Multi-Functional Enzyme Function Prediction With Hierarchical Multi-Label Deep Learning
Cited by: 75
Author(s): Zhenzhen Zou, Shuye Tian, Xin Gao, Yu Li
Software Mentions: 2
Published: over 5 years ago

10.3389/fgene.2020.00481

Incorporating Genome Annotation Into Genomic Prediction for Carcass Traits in Chinese Simmental Beef Cattle
Cited by: 19
Author(s): Lei Xu, Ning Gao, Zezhao Wang, Xu Liu, Ying Liu, Yan Chen, Lingyang Xu, Xue Gao, Lupei Zhang, Huijiang Gao, Bo Zhu, Junya Li
Software Mentions: 2
Published: about 4 years ago

10.3389/fgene.2021.652315

Risk Prediction in Patients With Heart Failure With Preserved Ejection Fraction Using Gene Expression Data and Machine Learning
Cited by: 8
Author(s): Liye Zhou, Zhifei Guo, Bijue Wang, Yongqing Wu, Zhi Li, Hongmei Yao, Ruiling Fang, Yang Huang, Hongyan Cao, Yuehua Cui
Software Mentions: 2
Published: about 3 years ago

10.1186/1471-2105-12-33

A genetic algorithm-Bayesian network approach for the analysis of metabolomics and spectroscopic data: application to the rapid identification of Bacillus spores and classification of Bacillus species
Cited by: 30
Author(s): Elon Correa, Royston Goodacre
Software Mentions: 2
Published: over 13 years ago

10.3389/fgene.2021.617915

The Shared Use of Extended Phenotypes Increases the Fitness of Simulated Populations
Cited by: 0
Author(s): G. Araujo, Renan Cipriano Moioli, Sandro J. de Souza
Software Mentions: 2
Published: over 3 years ago

10.3389/fnhum.2021.655840

A Lightweight Multi-Scale Convolutional Neural Network for P300 Decoding: Analysis of Training Strategies and Uncovering of Network Decision
Cited by: 13
Author(s): Davide Borra, Silvia Fantozzi, Elisa Magosso
Software Mentions: 2
Published: almost 3 years ago

10.1002/fsn3.1489

Qualitative discrimination of Chinese dianhong black tea grades based on a handheld spectroscopy system coupled with chemometrics
Cited by: 17
Author(s): Jing Huang, Guangxin Ren, Yuxuan Sun, Shanshan Jin, Luqing Li, Yujie Wang, Jingming Ning, Zhengzhu Zhang
Software Mentions: 2
Published: about 4 years ago

10.1155/2013/695937

Classification and Progression Based on CFS-GA and C5.0 Boost Decision Tree of TCM Zheng in Chronic Hepatitis B
Cited by: 4
Author(s): Xiao Yu Chen, Zhuang Li, Na Chu, Min Zhou, Yiyang Hu
Software Mentions: 2
Published: over 11 years ago

10.1186/1471-2105-11-59

Comparison of evolutionary algorithms in gene regulatory network model inference
Cited by: 66
Author(s): Alina Sîrbu, Heather J. Ruskin, Martin Crane
Software Mentions: 2
Published: over 14 years ago

10.3390/e22030261

A Method Based on GA-CNN-LSTM for Daily Tourist Flow Prediction at Scenic Spots
Cited by: 24
Author(s): Wen‐Xing Li, Haidong Rui, Changyong Liang, Li Jiang, Shuping Zhao, Keqing Li
Software Mentions: 2
Published: about 4 years ago

10.3389/fnhum.2021.708481

Implantable Pulse Generators for Deep Brain Stimulation: Challenges, Complications, and Strategies for Practicality and Longevity
Cited by: 19
Author(s): Can Sarica, Christian Iorio-Morin, David H Aguirre-Padilla, Ahmed Najjar, Michelle Paff, Anton Fomenko, Kazuaki Yamamoto, Ajmal Zemmar, Nir Lipsman, George M. Ibrahim, Clement Hamani, Mojgan Hodaie, Andrés M. Lozano, Renato P. Munhoz, Alfonso Fasano, Suneil K. Kalia
Software Mentions: 2
Published: over 2 years ago

10.1186/s12859-015-0706-x

Multi-objective optimization for RNA design with multiple target secondary structures
Cited by: 28
Author(s): Akito Taneda
Software Mentions: 2
Published: over 8 years ago

10.3390/e20090684

Multi-Objective Evolutionary Rule-Based Classification with Categorical Data
Cited by: 6
Author(s): Fernando Jiménez, Carlos Martínez, Luis Miralles‐Pechuán, Gracia and Guido Sciavicco
Software Mentions: 2
Published: over 5 years ago

10.1186/s12859-018-2314-z

Clustering approaches for visual knowledge exploration in molecular interaction networks
Cited by: 3
Author(s): Marek Ostaszewski, Emmanuel Kieffer, Grégoire Danoy, Reinhard Schneider, Pascal Bouvry
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2164-13-358

Discovery and validation of gene classifiers for endocrine-disrupting chemicals in zebrafish (danio rerio)
Cited by: 11
Author(s): Rong-Lin Wang, David C. Bencic, Adam D. Biales, Robert W. Flick, James M. Lazorchak, Daniel L. Villeneuve, Gerald T. Ankley
Software Mentions: 2
Published: over 12 years ago

10.1186/s12864-016-2530-8

De novo transcriptome assembly of the grapevine phylloxera allows identification of genes differentially expressed between leaf- and root-feeding forms
Cited by: 17
Author(s): Claude Rispe, Fabrice Legeai, Daciana Papura, Anthony Bretaudeau, Sylvie Hudaverdian, Gaël Le Trionnaire, Denis Tagu, Julie Jaquiéry, François Delmotte
Software Mentions: 2
Published: about 8 years ago

10.1155/2019/7519603

Convolutional Neural Networks for Recognition of Lymphoblast Cell Images
Cited by: 50
Author(s): Tatdow Pansombut, Siripen Wikaisuksakul, Kittiya Khongkraphan, Aniruth Phon-On
Software Mentions: 2
Published: almost 5 years ago

10.1016/j.csbj.2015.11.006

Disease, Models, Variants and Altered Pathways—Journeying RGD Through the Magnifying Glass
Cited by: 3
Author(s): Victoria Petri, G. Thomas Hayman, Marek Tutaj, Jennifer Smith, Stan Laulederkind, Shur-Jen Wang, Rajni Nigam, Jeff De Pons, Mary Shimoyama, Melinda R. Dwinell
Software Mentions: 2
Published: over 8 years ago

10.3390/ma12132133

Mechanical Identification of Materials and Structures with Optical Methods and Metaheuristic Optimization
Cited by: 4
Author(s): Elisa Ficarella, Luciano Lamberti, S. O. Degertekin
Software Mentions: 2
Published: almost 5 years ago

10.1155/2016/1032139

Layout Design of Human-Machine Interaction Interface of Cabin Based on Cognitive Ergonomics and GA-ACA
Cited by: 18
Author(s): Li Deng, Guohua Wang, Shuhui Yu
Software Mentions: 2
Published: over 8 years ago

10.1155/2016/8469428

A Genetic Algorithm and Fuzzy Logic Approach for Video Shot Boundary Detection
Cited by: 31
Author(s): Dalton Meitei Thounaojam, Khelchandra Thongam, Kh. Manglem Singh, Sudipta Roy
Software Mentions: 2
Published: over 8 years ago

10.1080/15685551.2016.1239166

Controlled grafting of vinylic monomers on polyolefins: a robust mathematical modeling approach
Cited by: 18
Author(s): Mohammad Reza Saeb, Babak Rezaee, Alireza Shadman, Krzysztof Formela, Zahed Ahmadi, Farkhondeh Hemmati, Tayebeh Sadat Kermaniyan, Yousef Mohammadi
Software Mentions: 2
Published: over 7 years ago

10.3390/e22090917

Entropy and the Brain: An Overview
Cited by: 49
Author(s): Soheil Keshmiri
Software Mentions: 2
Published: over 3 years ago

10.3389/fimmu.2021.655934

T Cell Activation, Highly Armed Cytotoxic Cells and a Shift in Monocytes CD300 Receptors Expression Is Characteristic of Patients With Severe COVID-19
Cited by: 46
Author(s): Olatz Zenarruzabeitia, Gabirel Astarloa-Pando, Íñigo Terrén, Ane Orrantia, Raquel Pérez-Garay, Iratxe Seijas-Betolaza, Javier Nieto-Arana, Natale Imaz-Ayo, Silvia Pérez‐Fernández, Eunate Arana-Arri, Francisco Borrego
Software Mentions: 2
Published: about 3 years ago

10.1111/ggi.13781

Prospective clinical trial evaluating vulnerability and chemotherapy risk using geriatric assessment tools in older patients with lung cancer
Cited by: 8
Author(s): Yukari Tsubata, Yohei Shiratsuki, Takae Okuno, Akari Tanino, Mika Nakao, Yoshimasa Amano, Tomomitsu Hotta, Megumi Hamaguchi, Tamio Okimoto, Shunichi Hamaguchi, Noriaki Kurimoto, Yumi Nishiyama, Tomohiro Kimura, Hiroyoshi Iwata, Shusaku Tsumoto, Takeshi Isobe
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0232830

Monitoring of cardiovascular physiology augmented by a patient-specific biomechanical model during general anesthesia. A proof of concept study
Cited by: 14
Author(s): Arthur Le Gall, Fabrice Vallée, Kuberan Pushparajah, Tarique Hussain, Alexandre Mebazaa, Dominique Chapelle, Étienne Gayat, Radomír Chabiniok
Software Mentions: 2
Published: about 4 years ago

10.1002/mrm.27626

Frequency difference mapping applied to the corpus callosum at 7T
Cited by: 11
Author(s): Benjamin C. Tendler, Richard Bowtell
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0127528

Human-Machine Interface for the Control of Multi-Function Systems Based on Electrocutaneous Menu: Application to Multi-Grasp Prosthetic Hands
Cited by: 18
Author(s): José González-Vargas, Strahinja Došen, Sebastian Amsuess, Wenwei Yu, Dario Farina
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0049039

Improved Gravitation Field Algorithm and Its Application in Hierarchical Clustering
Cited by: 10
Author(s): Ming Zheng, Ying Sun, Guixia Liu, You Zhou, Chunguang Zhou
Software Mentions: 2
Published: over 11 years ago

10.1007/s10462-021-10052-w

Differential evolution and particle swarm optimization against COVID-19
Cited by: 2
Author(s): A. Piotrowski, Agnieszka Piotrowska
Software Mentions: 2
Published: almost 3 years ago

10.1371/journal.pone.0172459

An adaptive random search for short term generation scheduling with network constraints
Cited by: 18
Author(s): José A. Marmolejo, Jonás Velasco, Héctor J. Selley
Software Mentions: 2
Published: about 7 years ago

10.3390/children5120171

Acceptability and Feasibility of Single-Component Primary School Physical Activity Interventions to Inform the AS:Sk Project
Cited by: 6
Author(s): Sarah L. Taylor, Robert J. Noonan, Zoë Knowles, Bronagh McGrane, Whitney B. Curry, Stuart J. Fairclough
Software Mentions: 2
Published: over 5 years ago

10.1590/1414-431X202010040

Predictors of functional capacity as measured by the Glittre activities of daily living test in women with rheumatoid arthritis
Cited by: 3
Author(s): M.J.A. Palugan, Ana Carolina Brandão Assis, Elizabeth Jauhar Cardoso Bessa, Arthur de Sá Ferreira, Agnaldo José Lopes
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0240436

The development of an alternative growth chart for estimated fetal weight in the absence of ultrasound: Application in Indonesia
Cited by: 1
Author(s): Dewi Anggraini, Mali Abdollahian, Kaye Marion
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0083757

Comparing the Biological Impact of Glatiramer Acetate with the Biological Impact of a Generic
Cited by: 34
Author(s): Fadi Towfic, Jason Funt, Kevin Fowler, Shlomo Bakshi, Eran Blaugrund, Maxim N. Artyomov, Michael R. Hayden, David Ladkani, Rivka Schwartz, Benjamin Zeskind
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2164-11-35

Assessing functional annotation transfers with inter-species conserved coexpression: application to Plasmodium falciparum
Cited by: 15
Author(s): Laurent Bréhélin, Isabelle Florent, Olivier Gascuel, Éric Maréchal
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0234922

A semi-structured questionnaire survey of laboratory animal rehoming practice across 41 UK animal research facilities
Cited by: 10
Author(s): Tess Skidmore, Emma Roe
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0158229

Hybrid Symbiotic Organisms Search Optimization Algorithm for Scheduling of Tasks on Cloud Computing Environment
Cited by: 54
Author(s): Abdullahi Mohammed, Md. Asri Ngadi
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0145222

The Edge-Disjoint Path Problem on Random Graphs by Message-Passing
Cited by: 13
Author(s): Fabrizio Altarelli, Alfredo Braunstein, Luca Dall’Asta, Caterina De Bacco, Silvio Franz
Software Mentions: 2
Published: over 8 years ago

10.1186/s13148-021-01055-z

An EPIC predictor of gestational age and its application to newborns conceived by assisted reproductive technologies
Cited by: 20
Author(s): Kristine L. Haftorn, Yunsung Lee, William Robert Paul Denault, Christian M. Page, Haakon E. Nustad, Robert Lyle, Håkon K. Gjessing, Anni Malmberg, Maria C Magnus, Øyvind Næss, Darina Czamara, Katri Räikkönen, Jari Lahti, Per Magnus, Siri Eldevik Håberg, Astanand Jugessur, Jon Bohlin
Software Mentions: 2
Published: about 3 years ago

10.1371/journal.pone.0223182

Research on multi-agent genetic algorithm based on tabu search for the job shop scheduling problem
Cited by: 13
Author(s): Chong Peng, Guo Qing Wu, T. Warren Liao, Hedong Wang
Software Mentions: 2
Published: over 4 years ago

10.1155/2021/5520710

Application of Genetic Algorithm-Based Support Vector Machine in Identification of Gene Expression Signatures for Psoriasis Classification: A Hybrid Model
Cited by: 9
Author(s): Leili Tapak, Saeid Afshar, Mahlagha Afrasiabi, Mohammad Kazem Ghasemi, Pedram Alirezaei
Software Mentions: 2
Published: over 2 years ago

10.1186/s12859-019-3001-4

Selection of microbial biomarkers with genetic algorithm and principal component analysis
Cited by: 10
Author(s): Ping Zhang, Nicholas P. West, Pin-Yen Chen, Mike W.C. Thang, Gareth Price, Allan W. Cripps, Amanda J. Cox
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0018541

A Collaborative Filtering Approach for Protein-Protein Docking Scoring Functions
Cited by: 31
Author(s): Thomas Bourquard, Julie Bernauer, Jérôme Azé, Anne Poupon
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0084070

Small RNA Analysis in Sindbis Virus Infected Human HEK293 Cells
Cited by: 11
Author(s): Andras Donaszi-Ivanov, Irina Mohorianu, Tamás Dalmay, Penny P. Powell
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0124672

A Global Optimization Approach to Multi-Polarity Sentiment Analysis
Cited by: 23
Author(s): Xinmiao Li, Jing Li, Yukeng Wu
Software Mentions: 2
Published: about 9 years ago

10.1155/2014/362738

A Survey on Evolutionary Algorithm Based Hybrid Intelligence in Bioinformatics
Cited by: 17
Author(s): Shan Li, Liying Kang, Xing‐Ming Zhao
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0242605

Characterization of binding between model protein GA-Z and human serum albumin using asymmetrical flow field-flow fractionation and small angle X-ray scattering
Cited by: 4
Author(s): Jun Kyun Choi, Marie Wahlgren, Vilhelm Ek, Ulla Elofsson, Jonas Fransson, Lars Nilsson, Ann E. Terry, Christopher Söderberg
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0232816

Solving text clustering problem using a memetic differential evolution algorithm
Cited by: 14
Author(s): Hossam M. J. Mustafa, Masri Ayob, Dheeb Albashish, Sawsan Abu-Taleb
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0030121

Gibberellin and Auxin Influence the Diurnal Transcription Pattern of Photoreceptor Genes via CRY1a in Tomato
Cited by: 18
Author(s): Paolo Facella, Loretta Daddiego, Giovanni Giuliano, Gaetano Perrotta
Software Mentions: 2
Published: over 12 years ago

10.1155/2020/2167160

A Survey on Recent Advances in Wearable Fall Detection Systems
Cited by: 82
Author(s): Anita Ramachandran, Anupama Karuppiah
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0234557

An autoencoder and artificial neural network-based method to estimate parity status of wild mosquitoes from near-infrared spectra
Cited by: 15
Author(s): Masabho P. Milali, Samson Kiware, Nicodem J. Govella, Fredros O. Okumu, Naveen K. Bansal, Serdar Bozdag, Jacques Derek Charlwood, Marta Maia, Sheila B. Ogoma, Floyd E. Dowell, George F. Corliss, Maggy T. Sikulu-Lord, Richard J. Povinelli
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0243940

High throughput mathematical modeling and multi-objective evolutionary algorithms for plant tissue culture media formulation: Case study of pear rootstocks
Cited by: 6
Author(s): Saeid Jamshidi, Abbas Yadollahi, Mostafa Arab, Mohammad Soltani, Mahdieh Eftekhari, Jalal Shiri
Software Mentions: 2
Published: over 3 years ago

10.1155/2018/2862458

Intelligence Algorithms for Protein Classification by Mass Spectrometry
Cited by: 5
Author(s): Zhiping Fan, Fanchen Kong, Yang Zhou, Yiqing Chen, Yalan Dai
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2164-11-710

Genome sequence of the pattern forming Paenibacillus vortex bacterium reveals potential for thriving in complex environments
Cited by: 40
Author(s): Alexandra Sirota-Madi, Tsviya Olender, Yael Helman, Colin J. Ingham, Ina Brainis, Dalit Roth, Efrat Hagi, Leonid Brodsky, Dena Leshkowitz, Vladimir Galatenko, В. И. Николаев, Raja C. Mugasimangalam, Sharron Bransburg-Zabary, David L. Gutnick, Doron Lancet, Eshel Ben‐Jacob
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0127781

Geographic Variation in Plant Community Structure of Salt Marshes: Species, Functional and Phylogenetic Perspectives
Cited by: 7
Author(s): Hongyu Guo, Scott Chamberlain, Eran Elhaik, Inder Jalli, Alana-Rose Lynes, Laurie B. Marczak, Niv Sabath, Amy Vargas, Kazimierz Więski, Emily M. Zelig, Steven C. Pennings
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0196215

Identifying artificial selection signals in the chicken genome
Cited by: 9
Author(s): Yunlong Ma, Lantao Gu, Liubin Yang, Chenghao Sun, Shengsong Xie, Fang Cui, Yangzhang Gong, Shijun Li
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0137724

Automatic Combination of Operators in a Genetic Algorithm to Solve the Traveling Salesman Problem
Cited by: 35
Author(s): Carlos Contreras‐Bolton, Víctor Parada
Software Mentions: 2
Published: over 8 years ago

10.1038/s42003-020-01548-2

Host relatedness and landscape connectivity shape pathogen spread in the puma, a large secretive carnivore
Cited by: 17
Author(s): Nicholas M. Fountain-Jones, Simona Kraberger, Roderick B. Gagne, Daryl R. Trumbo, Patricia E. Salerno, W. Chris Funk, Kevin R. Crooks, Roman Biek, Mathew W. Alldredge, Ken Logan, Guy Baele, Simon Dellicour, Holly B. Ernest, Sue VandeWoude, Scott Carver, Meggan E. Craft
Software Mentions: 2
Published: over 3 years ago

10.1155/2015/292683

A Genetic Algorithm Based Support Vector Machine Model for Blood-Brain Barrier Penetration Prediction
Cited by: 18
Author(s): Daqing Zhang, Jianfeng Xiao, Nannan Zhou, Mingyue Zheng, Xiaomin Luo, Hualiang Jiang, Kaixian Chen
Software Mentions: 2
Published: over 9 years ago

10.1186/s12863-015-0278-9

Improving accuracy of genomic prediction by genetic architecture based priors in a Bayesian model
Cited by: 21
Author(s): Ning Gao, Jiaqi Li, Jiayang He, Guang Hui Xiao, Yuanyu Luo, Hao Zhang, Zanmou Chen, Zhe Zhang
Software Mentions: 2
Published: over 8 years ago

10.3390/biom11010056

Design, Synthesis and In Vitro Investigation of Novel Basic Celastrol Carboxamides as Bio-Inspired Leishmanicidal Agents Endowed with Inhibitory Activity against Leishmania Hsp90
Cited by: 12
Author(s): Ivan Bassanini, Silvia Parapini, Erica Elisa Ferrandi, Elena Gabriele, Donatella Taramelli, Anna Sparatore
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0120976

Network Intrusion Detection Based on a General Regression Neural Network Optimized by an Improved Artificial Immune Algorithm
Cited by: 23
Author(s): Jianfa Wu, Dahao Peng, Zhuping Li, Zhao Li, Huanzhang Ling
Software Mentions: 2
Published: about 9 years ago

10.3390/biom8020024

Pharmaceutical Machine Learning: Virtual High-Throughput Screens Identifying Promising and Economical Small Molecule Inhibitors of Complement Factor C1s
Cited by: 14
Author(s): Jonathan J. Chen, Lyndsey N. Schmucker, Donald P. Visco
Software Mentions: 2
Published: about 6 years ago

10.1186/s12859-021-04139-y

Searching for universal model of amyloid signaling motifs using probabilistic context-free grammars
Cited by: 1
Author(s): Witold Dyrka, Marlena Gąsior-Głogowska, Monika Szefczyk, Natalia Szulc
Software Mentions: 2
Published: about 3 years ago

10.1093/biostatistics/kxw031

Letter to the Editor response: Nygaard et al .: Table 1.
Cited by: 3
Author(s): Fadi Towfic, Rebecca Kusko, Benjamin Zeskind
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0134084

Evolutionary Analyses and Natural Selection of Betaine-Homocysteine S-Methyltransferase (BHMT) and BHMT2 Genes
Cited by: 12
Author(s): Radhika Ganu, Yasuko Ishida, Markos Koutmos, Sergios‐Orestis Kolokotronis, Alfred L. Roca, Timothy A. Garrow, Lawrence B. Schook
Software Mentions: 2
Published: almost 9 years ago

10.1186/1471-2105-8-202

A Three Stage Integrative Pathway Search (TIPS©) framework to identify toxicity relevant genes and pathways
Cited by: 18
Author(s): Lirong Zheng, Shireesh Srivastava, Sheenu Mittal, Xuerui Yang, Lufang Sheng, Christina Chan
Software Mentions: 2
Published: almost 17 years ago

10.1371/journal.pone.0017374

Co-Expression of Host and Viral MicroRNAs in Porcine Dendritic Cells Infected by the Pseudorabies Virus
Cited by: 40
Author(s): Anna Anselmo, Laurence Flori, Florence Jaffrézic, Teresa Rutigliano, María C. Cecere, Naima G. Cortes-Perez, François Lefèvre, Claire Rogel‐Gaillard, Elisabetta Giuffra
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0195187

Hybrid flower pollination algorithm strategies for t-way test suite generation
Cited by: 45
Author(s): Abdullah B. Nasser, Kamal Z. Zamli, AbdulRahman A. Alsewari, Bestoun S. Ahmed
Software Mentions: 2
Published: about 6 years ago

10.1186/s12864-017-3906-0

A comprehensive genomic pan-cancer classification using The Cancer Genome Atlas gene expression data
Cited by: 126
Author(s): Yuanyuan Li, Kai Kang, J.M. Krahn, Nicole Croutwater, Kevin Lee, David M. Umbach, Leping Li
Software Mentions: 2
Published: almost 7 years ago

10.3390/life11060548

The Effectiveness of Robot- vs. Virtual Reality-Based Gait Rehabilitation: A Propensity Score Matched Cohort
Cited by: 5
Author(s): Emilia Biffi, Elena Beretta, Fabio Alexander Storm, Claudio Corbetta, Sandra Strazzer, Alessandra Pedrocchi, Emilia Ambrosini
Software Mentions: 2
Published: almost 3 years ago

10.1186/1471-2164-12-489

Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast
Cited by: 31
Author(s): Özgen Deniz, Oscar Flores, Federica Battistini, Alberto Pérez, Montserrat Soler-López, Modesto Orozco
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0054174

Identification and Characterization of MicroRNAs in Channel Catfish (Ictalurus punctatus) by Using Solexa Sequencing Technology
Cited by: 61
Author(s): Zhiqiang Xu, Jiaping Chen, Xuguang Li, Jiachun Ge, Jianlin Pan, Xiaofeng Xu
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0029581

Shared Pattern of Endocranial Shape Asymmetries among Great Apes, Anatomically Modern Humans, and Fossil Hominins
Cited by: 66
Author(s): Antoine Balzeau, Emmanuel Gilissen, Dominique Grimaud-Hervé
Software Mentions: 2
Published: over 12 years ago

10.1002/mrm.28097

Prospective GIRF‐based RF phase cycling to reduce eddy current‐induced steady‐state disruption in bSSFP imaging
Cited by: 8
Author(s): Tom Bruijnen, Bjorn Stemkens, C.A.T. Van den Berg, Rob H N Tijssen
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0136211

Improving Child Oral Health: Cost Analysis of a National Nursery Toothbrushing Programme
Cited by: 33
Author(s): Yulia Anopa, Alex D. McMahon, David I. Conway, Graham Ball, Emma McIntosh, L. M. D. Macpherson
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0243030

Design deep neural network architecture using a genetic algorithm for estimation of pile bearing capacity
Cited by: 41
Author(s): Tuan Anh Pham, Van Quan Tran, Huong-Lan Thi Vu, Haï‐Bang Ly
Software Mentions: 2
Published: over 3 years ago

10.1186/s12906-020-02900-z

Effect of Gallic acid and Myricetin on ovarian cancer models: a possible alternative antitumoral treatment
Cited by: 28
Author(s): Luis Varela-Rodríguez, Blanca Sánchez‐Ramírez, Verónica Ivonne Hernández‐Ramírez, Hugo Varela-Rodríguez, Rodrigo Daniel Castellanos-Mijangos, Carmen González-Horta, Bibiana Chávez‐Munguía, Patricia Talamás-Rohana
Software Mentions: 2
Published: about 4 years ago

10.1186/s12938-016-0222-x

Detection of Aβ plaque deposition in MR images based on pixel feature selection and class information in image level
Cited by: 2
Author(s): Yongming Li, Xinjian Zhu, Wang Pin, Jie Wang, Shujun Liu, Fan Li, Mingguo Qiu
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0235780

Susceptibility mapping and zoning of highway landslide disasters in China
Cited by: 12
Author(s): Chao Yin, Haoran Li, Fa Che, Ying Li, Zhinan Hu, Dong Liu
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0111430

Boolean Modelling Reveals New Regulatory Connections between Transcription Factors Orchestrating the Development of the Ventral Spinal Cord
Cited by: 23
Author(s): Anna Lovrics, Yu Gao, Bianka Juhász, István Bock, Helen M. Byrne, András Dinnyés, Krisztián A. Kovács
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2105-11-453

A multifactorial analysis of obesity as CVD risk factor: Use of neural network based methods in a nutrigenetics context
Cited by: 33
Author(s): Ioannis Valavanis, Stavroula Mougiakakou, Keith Grimaldi, Konstantina S. Nikita
Software Mentions: 2
Published: over 13 years ago

10.1186/s12872-018-0976-0

Simplification and optimization of transcatheter aortic valve implantation – fast-track course without compromising safety and efficacy
Cited by: 19
Author(s): Manik Chopra, Ngai Hong Vincent Luk, Ole De Backer, Lars Søndergaard
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0226048

Enhancing performance of subject-specific models via subject-independent information for SSVEP-based BCIs
Cited by: 8
Author(s): Mohammad Hadi Mehdizavareh, Sobhan Hemati, Hamid Soltanian-Zadeh
Software Mentions: 2
Published: over 4 years ago

10.1155/2018/6595792

Feature Selection for Object-Based Classification of High-Resolution Remote Sensing Images Based on the Combination of a Genetic Algorithm and Tabu Search
Cited by: 14
Author(s): Lei Shi, Youchuan Wan, Xianjun Gao, Mingwei Wang
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pgen.1004445

Comparison of Methods to Account for Relatedness in Genome-Wide Association Studies with Family-Based Data
Cited by: 101
Author(s): Jakris Eu-ahsunthornwattana, E.N. Miller, Michaela Fakiola, Selma M. B. Jerônimo, Jenefer M. Blackwell, Heather J. Cordell
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0121303

Plasmodium knowlesi Genome Sequences from Clinical Isolates Reveal Extensive Genomic Dimorphism
Cited by: 55
Author(s): Miguel Pinheiro, Atique Ahmed, Scott B. Millar, Theo Sanderson, Thomas D. Otto, Woon Chan Lu, Sanjeev Krishna, Julian C. Rayner, Janet Cox-Singh
Software Mentions: 2
Published: about 9 years ago

Projects: cran: GA

Papers Mentioning GA 1,091