cran: FactoMineR | Projects | Ecosyste.ms: Papers

10.3389/fcimb.2021.633573

Abundance and Expression of Shiga Toxin Genes in Escherichia coli at the Recto-Anal Junction Relates to Host Immune Genes
Cited by: 6
Author(s): Zhe Pan, Yanhong Chen, Tim A. McAllister, Michael G. Gänzle, Graham Plastow, Le Luo Guan
Software Mentions: 6
Published: over 3 years ago

10.1093/jxb/erx018

Genome-wide association study unravels the genetic control of the apple volatilome and its interplay with fruit texture
Cited by: 50
Author(s): Brian Farneti, Mario Di Guardo, Iuliia Khomenko, Luca Cappellin, Franco Biasioli, Riccardo Velasco, Fabrizio Costa
Software Mentions: 6
Published: over 7 years ago

10.1371/journal.pone.0028966

Understanding and Classifying Metabolite Space and Metabolite-Likeness
Cited by: 55
Author(s): Julio E. Peironcely, Theo H. Reijmers, L Coulier, Andreas Bender, Thomas Hankemeier
Software Mentions: 6
Published: almost 13 years ago

10.3390/insects12040367

Biological Strategies of Invasive Bark Beetles and Borers Species
Cited by: 3
Author(s): Denis A. Demidko, Natalia N. Demidko, Pavel V. Mikhaylov, Svetlana M. Sultson
Software Mentions: 6
Published: over 3 years ago

10.3390/nu10091230

Expression of Granulisyn, Perforin and Granzymes in Human Milk over Lactation and in the Case of Maternal Infection
Cited by: 15
Author(s): Alecia-Jane Twigger, Gwendoline K. Küffer, Donna T. Geddes, Luis Filgueria
Software Mentions: 6
Published: about 6 years ago

10.1186/s12864-021-07812-x

Stage-specific transcriptomic changes in pancreatic α-cells after massive β-cell loss
Cited by: 9
Author(s): Daniel Oropeza, Valentina Cigliola, Agustín Romero, Simona Chera, Santiago A. Rodríguez-Seguí, Pedro Luis Herrera
Software Mentions: 6
Published: over 3 years ago

10.3390/md19070357

Microalgae as Sustainable Bio-Factories of Healthy Lipids: Evaluating Fatty Acid Content and Antioxidant Activity
Cited by: 47
Author(s): Tiago Conde, Bruno Miguel Neves, Daniela Couto, Tânia Melo, Margarida Costa, Joana Silva, Pedro Domingues, M. Rosário M. Domingues
Software Mentions: 6
Published: over 3 years ago

10.1186/s13007-019-0444-6

Combining self-organizing maps and biplot analysis to preselect maize phenotypic components based on UAV high-throughput phenotyping platform
Cited by: 6
Author(s): Huagen Liang, Guijun Yang, Huayang Dai, Hao Yang, Bo Xu, Heli Li, Long Huang, Zhenhai Li, Xiaodong Yang, Chunjiang Zhao
Software Mentions: 5
Published: over 5 years ago

10.1186/1742-9994-8-5

Insights from Zootaxa on potential trends in zoological taxonomic activity
Cited by: 13
Author(s): Élise Tancoigne, Cyprien Bole, Anne Sigogneau, Alain Dubois
Software Mentions: 5
Published: almost 14 years ago

10.3390/ijms20225594

Lipid Related Genes Altered in NASH Connect Inflammation in Liver Pathogenesis Progression to HCC: A Canonical Pathway
Cited by: 19
Author(s): Christophe Desterke, Franck Chiappini
Software Mentions: 5
Published: about 5 years ago

10.3390/ijms20010059

We Are What We Eat: A Stoichiometric and Ecometabolomic Study of Caterpillars Feeding on Two Pine Subspecies of Pinus sylvestris
Cited by: 8
Author(s): Albert Rivas‐Ubach, Josep Peñuelas, José A. Hódar, Michal Oravec, Ljiljana Paša‐Tolić, Otmar Urban, Jordi Sardans
Software Mentions: 5
Published: almost 6 years ago

10.3390/ijms21041512

Dynamics of the Transcriptome Response to Heat in the Moss, Physcomitrella patens
Cited by: 11
Author(s): Osama Elzanati, Saïd Mouzeyar, Jane Roche
Software Mentions: 5
Published: over 4 years ago

10.3390/ijms22073436

Genotyping by Sequencing Reveals Genetic Relatedness of Southwestern U.S. Blue Maize Landraces
Cited by: 4
Author(s): Amol N. Nankar, Richard C. Pratt
Software Mentions: 5
Published: over 3 years ago

10.3389/fpls.2019.00849

Potential Elevation Shift of the European Beech Stands (Fagus sylvatica L.) in Serbia
Cited by: 11
Author(s): Lazar Pavlović, Dejan Stojanović, Emina Mladenović, Milena Lakićević, Saša Orlović
Software Mentions: 5
Published: over 5 years ago

10.3389/fbioe.2019.00229

The White-Rot Basidiomycete Dichomitus squalens Shows Highly Specific Transcriptional Response to Lignocellulose-Related Aromatic Compounds
Cited by: 21
Author(s): Joanna E. Kowalczyk, Mao Peng, Megan Pawlowski, Anna Lipzen, Vivian Ng, Vasanth Singan, Mei Wang, Igor V. Grigoriev, Miia Mäkelä
Software Mentions: 5
Published: about 5 years ago

10.3390/biology10090907

Dissecting Bread Wheat Heterosis through the Integration of Agronomic and Physiological Traits
Cited by: 6
Author(s): Kevin Gimenez, Pierre Blanc, O. Argillier, Jean-Baptiste Pierre, Jacques Le Gouis, Etienne Paux
Software Mentions: 5
Published: about 3 years ago

10.7554/eLife.61298

A small number of workers with specific personality traits perform tool use in ants
Cited by: 12
Author(s): István Maák, Garyk Roelandt, Patrizia d’Ettorre
Software Mentions: 5
Published: almost 4 years ago

10.3389/fpls.2021.681962

Why More Leaflets? The Role of Natural Selection in Shaping the Spatial Pattern of Leaf-Shape Variation in Oxytropis diversifolia (Fabaceae) and Two Close Relatives
Cited by: 4
Author(s): Hui Wang, Peiliang Liu, Jian Li, Han Yang, Qin Li, Zhao‐Yang Chang
Software Mentions: 5
Published: over 3 years ago

10.3389/fpls.2017.01923

Genome-Wide Association Mapping of Flowering and Ripening Periods in Apple
Cited by: 66
Author(s): Jorge Urrestarazu, Hélène Muranty, Caroline Denancé, Diane Leforestier, Elisa Ravon, Arnaud Guyader, Rémi Guisnel, Laurence Feugey, Santiago P. Aubourg, Jean Marc Celton, Nicolas Daccord, Luca Dondini, Roberto Gregori, M. Lateur, Patrick Houben, Matthew Ordidge, F. Paprštein, J. Sedlák, Hilde Nybom, Larisa Garkava-Gustavsson, Michela Troggio, Luca Bianco, Riccardo Velasco, Charles Poncet, Anthony Théron, Shigeki Moriya, M.C.A.M. Bink, François Laurens, Stefano Tartarini, Charles Eric Durel
Software Mentions: 5
Published: about 7 years ago

10.3389/fpls.2019.00511

Activity in the Arbuscular Mycorrhizal Hyphosphere Warning Neighbouring Plants
Cited by: 8
Author(s): Carmina Cabral, Bernd Wollenweber, Carla António, Sabine Ravnskov
Software Mentions: 5
Published: over 5 years ago

10.1080/15592294.2019.1656157

Hypermethylation-associated downregulation of microRNA-4456 in hypersexual disorder with putative influence on oxytocin signalling: A DNA methylation analysis of miRNA genes
Cited by: 16
Author(s): Adrian Boström, Andreas Chatzittofis, Diana‐Maria Ciuculete, John N. Flanagan, Regina Krattinger, Marcus Bandstein, Jessica Mwinyi, Gerd A. Kullak‐Ublick, Katarina Görts Öberg, Stefan Arver, Helgi B. Schiöth, Jussi Jokinen
Software Mentions: 5
Published: about 5 years ago

10.3390/ijerph13111091

Arsenic and Heavy Metal Contamination in Soils under Different Land Use in an Estuary in Northern Vietnam
Cited by: 31
Author(s): Thinh Nguyen Van, Akinori Ozaki, Hoang Nguyen Tho, Anh Nguyen Duc, Yen Tran Thi, Kiyoshi Kurosawa
Software Mentions: 5
Published: about 8 years ago

10.1371/journal.pone.0248654

A comparative analysis of biogas production from tomato bio-waste in mesophilic batch and continuous anaerobic digestion systems
Cited by: 17
Author(s): Árpád Szilágyi, Attila Bodor, Norbert Tolvai, Kornél L. Kovács, László Bodai, Roland Wirth, Zoltán Bagi, Ágnes Szepesi, Viktória Markó, Balázs Kakuk, Naila Bounedjoum, Gábor Rákhely
Software Mentions: 5
Published: over 3 years ago

10.3389/fpls.2020.01140

Development of a Novel Phenotypic Roadmap to Improve Blueberry Quality and Storability
Cited by: 10
Author(s): Brian Farneti, F. Emanuelli, Iuliia Khomenko, M. Ajelli, Franco Biasioli, L. Giongo
Software Mentions: 5
Published: over 4 years ago

10.7717/peerj.5133

Testing accuracy in 2D and 3D geometric morphometric methods for cut mark identification and classification
Cited by: 27
Author(s): Lloyd A. Courtenay, Miguel Ángel Maté‐González, Julia Aramendi, José Yravedra, Diego González‐Aguilera, Manuel Domı́nguez-Rodrigo
Software Mentions: 5
Published: over 6 years ago

10.1038/s41426-018-0202-2

Altered gut microbiota after traumatic splenectomy is associated with endotoxemia
Cited by: 15
Author(s): Hua Zhu, Yang Liu, Shengda Li, Ye Jin, Lei Zhao, Fuya Zhao, Jing Feng, Yan Wang, Yunwei Wei
Software Mentions: 5
Published: almost 6 years ago

10.2196/16077

Personalized Web-Based Cognitive Rehabilitation Treatments for Patients with Traumatic Brain Injury: Cluster Analysis
Cited by: 11
Author(s): Alejandro García-Rudolph, Alberto García-Molina, Eloy Opisso, Jose Maria Tormos Muñoz
Software Mentions: 5
Published: about 4 years ago

10.1128/mSphere.00071-20

Different Types of Atrial Fibrillation Share Patterns of Gut Microbiota Dysbiosis
Cited by: 36
Author(s): Kun Zuo, Xiandong Yin, Kuibao Li, Jing Zhang, Pan Wang, Jie Jiao, Zheng Liu, Xiaoqing Liu, Jiapeng Liu, Jing Li, Xinchun Yang
Software Mentions: 5
Published: over 4 years ago

10.3389/fonc.2021.616576

LncRNA FENDRR in Carcinoma-Associated Fibroblasts Regulates the Angiogenesis of Oral Squamous Cell Carcinoma Through the PI3K/AKT Pathway
Cited by: 4
Author(s): Yuming Xu, Erhui Jiang, Zhang Shao, Zhengjun Shang
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0234489

Application of network analysis and cluster analysis for better prevention and control of swine diseases in Argentina
Cited by: 11
Author(s): Jerome N. Baron, María Natalia Aznar, M. Monterubbianesi, Beatriz Martínez‐López
Software Mentions: 5
Published: over 4 years ago

10.1002/ece3.7734

High foliar K and P resorption efficiencies in old‐growth tropical forests growing on nutrient‐poor soils
Cited by: 17
Author(s): Ifigenia Urbina, Oriol Grau, Jordi Sardans, Olga Margalef, Guille Peguero, Dolores Asensio, Joan Llusià, Romà Ogaya, Albert Gargallo‐Garriga, Leandro Van Langenhove, Lore T. Verryckt, Elodie A. Courtois, Clément Stahl, Jennifer L. Soong, Jérôme Chave, Bruno Hérault, Ivan A. Janssens, Emma J. Sayer, Josep Peñuelas
Software Mentions: 5
Published: over 3 years ago

10.1038/ismej.2017.101

Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization
Cited by: 118
Author(s): Beate M. Slaby, Thomas Hackl, Hannes Horn, Kristina Bayer, Ute Hentschel
Software Mentions: 5
Published: over 7 years ago

10.1186/s12889-019-6565-z

Socioeconomic and environmental factors associated with malaria hotspots in the Nanoro demographic surveillance area, Burkina Faso
Cited by: 30
Author(s): Toussaint Rouamba, Seydou Nakanabo‐Diallo, Karim Derra, Eli Rouamba, Adama Kazienga, Yasuko Inoue, Ernest Ouédraogo, Moussa Waongo, Sokhna Dieng, Abdoulaye Guindo, Boukary Ouédraogo, Kankoé Sallah, Seydou Barro, Pascal Yaka, Fati Kirakoya‐Samadoulougou, Halidou Tinto, Jean Gaudart
Software Mentions: 5
Published: over 5 years ago

10.1186/1471-2148-13-158

Modularity of a leaf moth-wing pattern and a versatile characteristic of the wing-pattern ground plan
Cited by: 25
Author(s): Takao Suzuki
Software Mentions: 5
Published: almost 12 years ago

10.1371/journal.pone.0201031

Salmonella spp. transmission in a vertically integrated poultry operation: Clustering and diversity analysis using phenotyping (serotyping, phage typing) and genotyping (MLVA)
Cited by: 18
Author(s): Helen Crabb, Joanne L. Allen, Joanne M. Devlin, Simon M. Firestone, C. R. Wilks, James R. Gilkerson
Software Mentions: 5
Published: over 6 years ago

10.1002/ece3.3673

Rapid song divergence leads to discordance between genetic distance and phenotypic characters important in reproductive isolation
Cited by: 21
Author(s): Emmanuel C. Nwankwo, Chryso Th. Pallari, Louis Hadjioannou, Andreas L. Ioannou, Ronald K. Mulwa, Alexander N. G. Kirschel
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41398-021-01481-w

Toll-like receptor 4 methylation grade is linked to depressive symptom severity
Cited by: 10
Author(s): Annica J. Rasmusson, Maike Gallwitz, Bardia Soltanabadi, Diana M. Ciuculete, Jonas Mengel‐From, Kaare Christensen, Marianne Nygaard, Mette Soerensen, Adrian Boström, Robert Fredriksson, Eva Freyhult, Jessica Mwinyi, Darina Czamara, Elisabeth B. Binder, Helgi B. Schiöth, Janet L. Cunningham
Software Mentions: 5
Published: over 3 years ago

10.3389/fmicb.2021.680622

Gut Microbiota Signature Among Asian Post-gestational Diabetes Women Linked to Macronutrient Intakes and Metabolic Phenotypes
Cited by: 12
Author(s): Zubaidah Hasain, Raja Affendi Raja Ali, Shairah Abdul Razak, Kamalrul Azlan Azizan, Emad El‐Omar, Nurul Huda Razalli, Norfilza Mohd Mokhtar
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-021-98343-8

Low serum vitamin D concentrations in Spring-born dairy calves are associated with elevated peripheral leukocytes
Cited by: 7
Author(s): Susana Flores‐Villalva, Megan B. O’Brien, Cian Reid, Seán Lacey, Stephen V. Gordon, Corwin D. Nelson, Kieran G. Meade
Software Mentions: 5
Published: about 3 years ago

10.1038/s41598-021-96378-5

Biogeography of acoustic biodiversity of NW Mediterranean coralligenous reefs
Cited by: 13
Author(s): Lucia Di Iorio, Manon Audax, Julie Déter, Florian Holon, Julie Lossent, Cédric Gervaise, Pierre Boissery
Software Mentions: 5
Published: over 3 years ago

10.3390/molecules26154588

Humic Acid Improves Zn Fertilization in Oxisols Successively Cultivated with Maize–Brachiaria
Cited by: 4
Author(s): Everton Geraldo de Morais, Carlos Alberto Silva, Keiji Jindo
Software Mentions: 5
Published: over 3 years ago

10.3389/fmicb.2020.01452

Association of Maternal Factors and HIV Infection With Innate Cytokine Responses of Delivering Mothers and Newborns in Mozambique
Cited by: 6
Author(s): Gemma Moncunill, Carlota Dobaño, Raquel González, Kinga K. Smolen, Maria Nélia Manaca, Reyes Balcells, Chenjerai Jairoce, Pau Cisteró, Anifa Valá, Esperança Sevene, Maria Rosario, John J. Aponte, Eusébio Macete, Clara Menéndez, Tobias R. Kollmann, Alfredo Mayor
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0094162

Geographic Variation of Melanisation Patterns in a Hornet Species: Genetic Differences, Climatic Pressures or Aposematic Constraints?
Cited by: 39
Author(s): A. Perrard, Marcella Arca, Quentin Rome, Franck Müller, Jiang-Li Tan, Sanjaya Bista, Hari Nugroho, Raymond Baudoin, Michel Baylac, Jean François Silvain, James M. Carpenter, Claire Villemant
Software Mentions: 5
Published: over 10 years ago

10.3389/fncir.2019.00032

A Novel Type of Neuron Within the Dorsal Striatum
Cited by: 16
Author(s): Miaomiao Mao, Aditya Nair, George J Augustine
Software Mentions: 5
Published: over 5 years ago

10.1007/s00125-021-05527-y

MAIT cell alterations in adults with recent-onset and long-term type 1 diabetes
Cited by: 5
Author(s): Isabelle Nel, Lucie Beaudoin, Zouriatou Gouda, Camille Rousseau, Pauline Soulard, Matthieu Rouland, Léo Bertrand, Christian Boîtard, Étienne Larger, Agnès Lehuen
Software Mentions: 5
Published: over 3 years ago

10.1002/ece3.3547

Weak whole‐plant trait coordination in a seasonally dry South American stressful environment
Cited by: 25
Author(s): José Luiz Alves Silva, Alexandre F. Souza, Adriano Caliman, Eduardo Luiz Voigt, Juliana Espada Lichston
Software Mentions: 5
Published: about 7 years ago

10.1186/s13046-021-02031-4

Elesclomol-induced increase of mitochondrial reactive oxygen species impairs glioblastoma stem-like cell survival and tumor growth
Cited by: 35
Author(s): Mariachiara Buccarelli, Quintino Giorgio D’Alessandris, Paola Matarrese, Cristiana Mollinari, Michele Signore, Andrea Cappannini, Maurizio Martini, Pierluigi D’Aliberti, Gabriele De Luca, Francesca Pedini, Alessandra Boe, Mauro Biffoni, Roberto Pallini, Lucia Ricci‐Vitiani
Software Mentions: 5
Published: over 3 years ago

10.1186/s12866-021-02195-1

Characteristics and variation of fecal bacterial communities and functions in isolated systolic and diastolic hypertensive patients
Cited by: 8
Author(s): Pan Wang, Ying Dong, Kun Zuo, Chide Han, Jie Jiao, Xinchun Yang, Jing Li
Software Mentions: 5
Published: over 3 years ago

10.1186/s12911-019-0929-2

ThalPred: a web-based prediction tool for discriminating thalassemia trait and iron deficiency anemia
Cited by: 18
Author(s): Vishuda Laengsri, Watshara Shoombuatong, W. Adirojananon, Chanin Nantasenamat, Virapong Prachayasittikul, Pornlada Nuchnoi
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-021-89969-9

Data-science based analysis of perceptual spaces of odors in olfactory loss
Cited by: 2
Author(s): Jörn Lötsch, Alfred Ultsch, Antje Hähner, Vivien Willgeroth, Moustafa Bensafi, Andrea Zaliani, Thomas Hummel
Software Mentions: 5
Published: over 3 years ago

10.1186/1471-2407-14-994

The association between Histone 3 Lysine 27 Trimethylation (H3K27me3) and prostate cancer: relationship with clinicopathological parameters
Cited by: 43
Author(s): Marjolaine Ngollo, André Lebert, Aslihan Dagdemir, Gaëlle Judes, Seher Karslı-Çeppioğlu, Marine Daures, Jean‐Louis Kemeny, Frédérique Penault‐Llorca, Jean‐Paul Boiteux, Yves‐Jean Bignon, Laurent Guy, Dominique Bernard‐Gallon
Software Mentions: 5
Published: almost 10 years ago

10.1038/s41598-020-77284-8

Lung squamous cell carcinoma and lung adenocarcinoma differential gene expression regulation through pathways of Notch, Hedgehog, Wnt, and ErbB signalling
Cited by: 34
Author(s): Dorota Anusewicz, Magdalena Orzechowska, Andrzej K. Bednarek
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-020-73341-4

Brew temperature, at fixed brew strength and extraction, has little impact on the sensory profile of drip brew coffee
Cited by: 14
Author(s): Mackenzie E. Batali, William D. Ristenpart, Jean‐Xavier Guinard
Software Mentions: 5
Published: about 4 years ago

10.1038/s41598-020-79014-6

Data preprocessing workflow for exhaled breath analysis by GC/MS using open sources
Cited by: 15
Author(s): Rosa Alba Sola Martínez, José M. Pastor, Gema Lozano Terol, Julia Gallego‐Jara, Luis García‐Marcos, Manuel Cánovas Díaz, Teresa De Diego
Software Mentions: 5
Published: almost 4 years ago

10.1186/s40168-020-00823-y

Most dominant roles of insect gut bacteria: digestion, detoxification, or essential nutrient provision?
Cited by: 128
Author(s): Tianzhong Jing, Fenghui Qi, Zhiying Wang
Software Mentions: 5
Published: over 4 years ago

10.1016/j.stem.2017.09.003

Chromatin and Single-Cell RNA-Seq Profiling Reveal Dynamic Signaling and Metabolic Transitions during Human Spermatogonial Stem Cell Development
Cited by: 190
Author(s): Jingtao Guo, Edward J. Grow, Chongil Yi, Hana Mlčochová, Geoffrey J. Maher, Cecilia Lindskog, Patrick J. Murphy, Candice L. Wike, Douglas T. Carrell, Anne Goriely, James M. Hotaling, Bradley R. Cairns
Software Mentions: 5
Published: about 7 years ago

10.1186/s12885-020-07473-1

A gene-based survival score for lung adenocarcinoma by multiple transcriptional datasets analysis
Cited by: 4
Author(s): Yanlu Xiong, Jie Lei, Jinbo Zhao, Qiang Lü, Yangbo Feng, Tianyun Qiao, Shaowei Xin, Han Ye, Tao Jiang
Software Mentions: 5
Published: about 4 years ago

10.1016/j.jcmgh.2021.06.004

Impaired Luminal Control of Intestinal Macrophage Maturation in Patients With Ulcerative Colitis During Remission
Cited by: 7
Author(s): Lujain Maasfeh, Anetta Härtlová, Stefan Isaksson, Johanna Sundin, Georgios Mavroudis, Otto Savolainen, Hans Strid, Lena Öhman, Maria K. Magnusson
Software Mentions: 5
Published: almost 4 years ago

10.1186/s12885-017-3777-4

Multi-region and single-cell sequencing reveal variable genomic heterogeneity in rectal cancer
Cited by: 28
Author(s): Mingshan Liu, Yang Liu, Jiabo Di, Zhe Su, Hong Yang, Beihai Jiang, Zaozao Wang, Zhen Meng, Fan Bai, Xiangqian Su
Software Mentions: 5
Published: almost 7 years ago

10.1186/s12864-016-2429-4

Genome-wide association mapping of partial resistance to Aphanomyces euteiches in pea
Cited by: 64
Author(s): Aurore Desgroux, Virginie Merot l'Anthoene, Martine Roux-Duparque, Jean-Philippe Rivière, Grégoire Aubert, Nadim Tayeh, Anne Moussart, P Mangin, Pierrick Vetel, Christophe Piriou, Rebecca J. McGee, Clarice J. Coyne, Judith Burstin, Alain Baranger, Maria Manzanares-Dauleux, Virginie Bourion, Marie‐Laure Pilet‐Nayel
Software Mentions: 5
Published: almost 9 years ago

10.1016/j.chom.2020.01.004

Bacteriophages Isolated from Stunted Children Can Regulate Gut Bacterial Communities in an Age-Specific Manner
Cited by: 79
Author(s): Mohammadali Khan Mirzaei, Anik Ashfaq Khan, Prakash Ghosh, Zofia E. Taranu, Mariia Taguer, Jinlong Ru, Rajashree Chowdhury, Md. Mamun Kabir, Li Deng, Dinesh Mondal, Corinne F. Maurice
Software Mentions: 5
Published: almost 5 years ago

10.1186/s12915-020-00835-y

Machine learning approaches identify male body size as the most accurate predictor of species richness
Cited by: 4
Author(s): Klemen Čandek, Urška Pristovšek Čandek, Matjaž Kuntner
Software Mentions: 5
Published: about 4 years ago

10.3389/fmicb.2018.02784

The Influence of Viable Cells and Cell-Free Extracts of Lactobacillus casei on Volatile Compounds and Polyphenolic Profile of Elderberry Juice
Cited by: 17
Author(s): Annalisa Ricci, Alessia Levante, Martina Cirlini, Luca Calani, Valentina Bernini, Daniele Del Rio, Gianni Galaverna, Erasmo Neviani, Camilla Lazzi
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-020-68020-3

Human-like maternal left-cradling bias in monkeys is altered by social pressure
Cited by: 18
Author(s): Grégoire Boulinguez-Ambroise, Emmanuelle Pouydebat, Éloïse Disarbois, Adrien Meguerditchian
Software Mentions: 5
Published: over 4 years ago

10.1186/s12864-021-07517-1

Transcriptomic analysis of the trade-off between endurance and burst-performance in the frog Xenopus allofraseri
Cited by: 1
Author(s): Valérie Ducret, Adam Richards, Mathieu Videlier, Thibault Scalvenzi, Karen Moore, Konrad Paszkiewicz, Camille Bonneaud, Nicolas Pollet, Anthony Herrel
Software Mentions: 5
Published: over 3 years ago

10.1186/s12864-021-07724-w

Transcriptomic and metabolomic characterization of post-hatch metabolic reprogramming during hepatic development in the chicken
Cited by: 4
Author(s): Heidi A. Van Every, Carl J. Schmidt
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0117605

Gender-Dependent Differences in Plasma Matrix Metalloproteinase-8 Elevated in Pulmonary Tuberculosis
Cited by: 27
Author(s): Tarangini Sathyamoorthy, Gurjinder Sandhu, Liku B. Tezera, Richard Thomas, Akul Singhania, Christopher H. Woelk, Borislav D. Dimitrov, Dan Agranoff, Carlton A. Evans, Jon S. Friedland, Paul Elkington
Software Mentions: 5
Published: almost 10 years ago

10.1371/journal.pone.0188842

Markers of epithelial-to-mesenchymal transition reflect tumor biology according to patient age and Gleason score in prostate cancer
Cited by: 31
Author(s): Dorota Jędroszka, Magdalena Orzechowska, R. Hamouz, Karolina Górniak, Andrzej K. Bednarek
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41598-018-25760-7

Different rearing conditions alter gut microbiota composition and host physiology in Shaoxing ducks
Cited by: 36
Author(s): Shumei Wang, Li Chen, Maozhang He, Junda Shen, Guoqin Li, Tao Zhang, Ru‐Rong Wu, Lizhi Liu
Software Mentions: 5
Published: over 6 years ago

10.1186/s12859-019-3291-6

DeepMF: deciphering the latent patterns in omics profiles with a deep learning method
Cited by: 10
Author(s): Lingxi Chen, Jianjun Xu, Shuai Cheng Li
Software Mentions: 5
Published: almost 5 years ago

10.1038/s41598-018-29635-9

Trees represent community composition of other plant life-forms, but not their diversity, abundance or responses to fragmentation
Cited by: 15
Author(s): Bonifacio O. Pasion, Mareike Roeder, Jiajia Liu, Mika Yasuda, Richard T. Corlett, J. W. Ferry Slik
Software Mentions: 5
Published: over 6 years ago

10.3389/fimmu.2021.614246

Reduced Placental Transfer of Antibodies Against a Wide Range of Microbial and Vaccine Antigens in HIV-Infected Women in Mozambique
Cited by: 10
Author(s): Selena Alonso, Marta Vidal, Gemma Ruiz‐Olalla, Raquel González, Maria Nélia Manaca, Chenjerai Jairoce, Miquel Vázquez-Santiago, Reyes Balcells, Anifa Valá, Maria Rosario, Pau Cisteró, Laura Fuente-Soro, Marta Cova, Evelina Angov, Arsénio Nhacolo, Esperança Sevene, John J. Aponte, Eusébio Macete, Ruth Aguilar, Alfredo Mayor, Clara Menéndez, Carlota Dobaño, Gemma Moncunill
Software Mentions: 5
Published: over 3 years ago

10.3389/fimmu.2021.639965

Inflammatory Determinants of Differential Tuberculosis Risk in Pre-Adolescent Children and Young Adults
Cited by: 7
Author(s): Richard Baguma, Stanley Kimbung Mbandi, Miguel Rodo, Mzwandile Erasmus, Jonathan Day, Lebohang Makhethe, Marwou de Kock, Michele van Rooyen, Lynnett Stone, Nicole Bilek, Marcia Steyn, Hadn Africa, Fatoumatta Darboe, Novel N. Chegou, Gerard Tromp, Gerhard Walzl, Mark Hatherill, Adam Penn-Nicholson, Thomas J. Scriba
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-017-08892-0

Development and assessment of a lysophospholipid-based deep learning model to discriminate geographical origins of white rice
Cited by: 14
Author(s): Nguyen Phuoc Long, Dong Kyu Lim, Changyeun Mo, Gi‐Young Kim, Sung Won Kwon
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pntd.0003123

Spatio-temporal Patterns and Landscape-Associated Risk of Buruli Ulcer in Akonolinga, Cameroon
Cited by: 31
Author(s): Jordi Landier, Jean Gaudart, Kevin Carolan, Danny Lo Seen, Jean‐François Guégan, Sara Eyangoh, Arnaud Fontanet, Gaëtan Texier
Software Mentions: 5
Published: about 10 years ago

10.1371/journal.pone.0228880

Spatio-temporal variation of Cerambycidae-host tree interaction networks
Cited by: 8
Author(s): Michelle Ramos‐Robles, Orthon Ricardo Vargas‐Cardoso, Angélica María Corona‐López, Alejandro Flores‐Palacios, Víctor Hugo Toledo‐Hernández
Software Mentions: 5
Published: almost 5 years ago

10.1038/srep22932

Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in the horse
Cited by: 44
Author(s): Núria Mach, Sandra Plancade, Alicja Pacholewska, Jérôme Lecardonnel, Julie Rivière, Marco Moroldo, Anne Vaiman, Caroline Morgenthaler, Marine Beinat, Alizée Nevot, Céline Robert, Éric Barrey
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0220692

Improving methodology in heart rate variability analysis for the premature infants: Impact of the time length
Cited by: 13
Author(s): Trang Nguyen Phuc Thu, Alfredo Hernández, Nathalie Costet, Hugues Patural, Vincent Pichot, Guy Carrault, Alain Beuchée
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pgen.1005305

Identification of Chemical Inhibitors of β-Catenin-Driven Liver Tumorigenesis in Zebrafish
Cited by: 62
Author(s): Kimberley Evason, Macrina T. Francisco, Vladislava Juric, Sanjeev Balakrishnan, Maria del Pilar Lopez Pazmino, John D. Gordan, Sanjay Kakar, Jan M. Spitsbergen, Andrei Goga, Didier Y. R. Stainier
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pgen.1005616

Genome-Wide Analysis Reveals Novel Regulators of Growth in Drosophila melanogaster
Cited by: 50
Author(s): Sibylle C. Vonesch, David Lamparter, Trudy F. C. Mackay, Sven Bergmann, Ernst Hafen
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-017-18668-1

Initial evenness determines diversity and cell density dynamics in synthetic microbial ecosystems
Cited by: 12
Author(s): Elham Ehsani, Emma Hernandez-Sanabria, Frederiek‐Maarten Kerckhof, Ruben Props, Ramiro Vílchez-Vargas, Marius Vital, Dietmar H. Pieper, Nico Boon
Software Mentions: 5
Published: almost 7 years ago

10.3390/proteomes6030031

Regional Diversity in the Postsynaptic Proteome of the Mouse Brain
Cited by: 37
Author(s): Marcia Roy, Oksana Sorokina, Colin McLean, Silvia Tapia-González, Javier DeFelipe, J. Douglas Armstrong, Seth G. N. Grant
Software Mentions: 5
Published: over 6 years ago

10.3389/fncel.2020.00245

A Primer on Constructing Plasticity Phenotypes to Classify Experience-Dependent Development of the Visual Cortex
Cited by: 2
Author(s): Justin L. Balsor, Dezi Ahuja, David Jones, Kathryn Murphy
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pbio.3001017

Single-cell RNA-seq analysis of mouse preimplantation embryos by third-generation sequencing
Cited by: 38
Author(s): Xiaoying Fan, Dong Tang, Yuhan Liao, Pidong Li, Yu Zhang, Minxia Wang, Fan Liang, Xiao Wang, Yun Gao, Lu Wen, Depeng Wang, Yan Wang, Fuchou Tang
Software Mentions: 5
Published: almost 4 years ago

10.1002/cam4.3289

Predicting biomarkers from classifier for liver metastasis of colorectal adenocarcinomas using machine learning models
Cited by: 12
Author(s): Shuwen Han, Yang Xi, Qing Zhou, Zhuang Jing, Wei Wu
Software Mentions: 5
Published: over 4 years ago

10.1098/rsos.171532

Stable genetic structure and connectivity in pollution-adapted and nearby pollution-sensitive populations of<i>Fundulus heteroclitus</i>
Cited by: 1
Author(s): Joaquin C. B. Nunez, Leann M. Biancani, Patrick A. Flight, Diane Nacci, David M. Rand, Douglas L. Crawford, Marjorie F. Oleksiak
Software Mentions: 5
Published: over 6 years ago

10.1177/1176935118771082

Decomposing the Apoptosis Pathway Into Biologically Interpretable Principal Components
Cited by: 18
Author(s): Min Wang, Steven M. Kornblau, Kevin R. Coombes
Software Mentions: 5
Published: almost 7 years ago

10.3390/jcm8010050

Efficacy of Integrating a Novel 16-Gene Biomarker Panel and Intelligence Classifiers for Differential Diagnosis of Rheumatoid Arthritis and Osteoarthritis
Cited by: 24
Author(s): Nguyen Phuoc Long, Seongoh Park, Nguyễn Hoàng Anh, Jung Eun Min, Sang Jun Yoon, Hyung Min Kim, Tran Diem Nghi, Dong Kyu Lim, Jeong Hill Park, Jong-Tae Lim, Sung Won Kwon
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0212365

Mycobacteriophage CRB2 defines a new subcluster in mycobacteriophage classification
Cited by: 4
Author(s): Cristian Alejandro Suárez, Jorgelina Judith Franceschelli, Héctor Ricardo Morbidoni
Software Mentions: 5
Published: over 5 years ago

10.1186/s12977-019-0494-x

Heterogeneity in HIV and cellular transcription profiles in cell line models of latent and productive infection: implications for HIV latency
Cited by: 32
Author(s): Sushama Telwatte, Sara Morón-López, Dvir Aran, Peggy Kim, Christine L. Hsieh, Sunil Kumar Joshi, Mauricio Montaño, Warner C. Greene, Atul J. Butte, Joseph K. Wong, Steven A. Yukl
Software Mentions: 5
Published: about 5 years ago

10.3390/plants9121775

Compositional Analyses Reveal Relationships among Components of Blue Maize Grains
Cited by: 4
Author(s): Amol N. Nankar, M. Paul Scott, Richard C. Pratt
Software Mentions: 5
Published: almost 4 years ago

10.3390/plants10061043

Genotypic Variability on Grain Yield and Grain Nutritional Quality Characteristics of Wheat Grown under Elevated CO2 and High Temperature
Cited by: 9
Author(s): Emilio L. Marcos-Barbero, Pilar Pérez Pérez, Rafael Martínez‐Carrasco, Juan B. Arellano, Rosa Morcuende
Software Mentions: 5
Published: over 3 years ago

10.3390/insects12040298

Effectiveness of Push–Pull Systems to Fall Armyworm (Spodoptera frugiperda) Management in Maize Crops in Morelos, Mexico
Cited by: 4
Author(s): Ouorou Ganni Mariel Guera, Federico Castrejón-Ayala, Norma Robledo, Alfredo Jiménez‐Pérez, Georgina Sánchez-Rivera, Lilia Salazar-Marcial, Hilda Elizabet Flores Moctezuma
Software Mentions: 5
Published: over 3 years ago

10.1186/s12864-019-5561-0

In silico analysis of fungal small RNA accumulation reveals putative plant mRNA targets in the symbiosis between an arbuscular mycorrhizal fungus and its host plant
Cited by: 42
Author(s): Alessandro Silvestri, Valentina Fiorilli, Laura Miozzi, G. P. Accotto, Massimo Turina, Luisa Lanfranco
Software Mentions: 5
Published: over 5 years ago

10.3390/plants10040653

The Distribution of Minerals in Crucial Plant Parts of Various Elderberry (Sambucus spp.) Interspecific Hybrids
Cited by: 8
Author(s): Nataša Imenšek, Vilma Sem, Mitja Kolar, Anton Ivančič, Janja Kristl
Software Mentions: 5
Published: over 3 years ago

10.1186/s40478-018-0614-1

Transcriptomic and epigenetic profiling of ‘diffuse midline gliomas, H3 K27M-mutant’ discriminate two subgroups based on the type of histone H3 mutated and not supratentorial or infratentorial location
Cited by: 78
Author(s): David Castel, Cathy Philippe, Thomas Kergrohen, Martin Sill, Jane Merlevede, E. Barret, Stéphanie Puget, Christian Sainte‐Rose, Christof M. Kramm, Chris Jones, Pascale Varlet, Stefan M. Pfister, Jacques Grill, David Jones, Marie‐Anne Debily
Software Mentions: 5
Published: about 6 years ago

10.3390/plants9030395

Changes in Foliar Functional Traits of S. pyrenaicus subsp. carpetanus under the Ongoing Climate Change: A Retrospective Survey
Cited by: 5
Author(s): Rosina Magaña Ugarte, Adrián Escudero, Daniel Sánchez‐Mata, Rosario G. Gavilán
Software Mentions: 5
Published: over 4 years ago

10.3389/fcell.2021.655866

Proteomic Changes Associated With Sperm Fertilizing Ability in Meat-Type Roosters
Cited by: 4
Author(s): Anaïs Vitorino Carvalho, Laura Soler, Aurore Thélie, Isabelle Grasseau, Luiz Cordeiro, Daniel Tomas, Ana-Paula Teixeira-Gomes, Valérie Labas, Elisabeth Blesblois
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pntd.0009763

Assessment of the diagnostic accuracy and relevance of a novel ELISA system developed for seroepidemiologic surveys of Helicobacter pylori infection in African settings
Cited by: 1
Author(s): Evariste Tshibangu‐Kabamba, Bui Hoang Phuc, Vo Phuoc Tuan, Kartika Afrida Fauzia, Augustin Kabongo-Tshibaka, Nadine Kalenda Kayiba, Ángel Rosas Aguirre, Brecht Devleesschauwer, Alain Cimuanga-Mukanya, Patrick de Jésus Ngoma Kisoko, Takashi Matsumoto, Junko Akada, Ghislain Tumba Disashi, Dieudonné Mumba Ngoyi, Yasutoshi Kido, Niko Speybroeck, Yoshio Yamaoka
Software Mentions: 5
Published: about 3 years ago

10.1371/journal.pone.0252685

Expanded transcriptomic view of strawberry fruit ripening through meta-analysis
Cited by: 0
Author(s): Gibum Yi, Hosub Shin, Kyeonglim Min, Eun Jin Lee
Software Mentions: 5
Published: over 3 years ago

Projects: cran: FactoMineR

Papers Mentioning FactoMineR 1,101