Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: EpiNow2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/EpiNow2

Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters
7 versions
Latest release: about 1 year ago
906 downloads last month

Papers Mentioning EpiNow2 7

Deciphering the introduction and transmission of SARS-CoV-2 in the Colombian Amazon Basin
Cited by: 7
Author(s): Nathalia Ballesteros, Marina Muñoz, Luz Helena Patiño, Carolina Hernández, Felipe González-Casabianca, Iván Carroll, Mauricio Santos-Vega, Jaime Cascante, Andrés Ángel, Alejandro Feged-Rivadeneira, Mónica Palma-Cuero, Carolina Flórez, Sergio Gómez, Adriana van de Guchte, Zenab Khan, Jayeeta Dutta, Ajay Obla, Hala Alshammary, Ana S. González-Reiche, Matthew M. Hernandez, Emilia Mia Sordillo, Viviana Simon, Harm van Bakel, Alberto Paníz-Mondolfi, Juan David Ramírez
Software Mentions: 3
Published: over 3 years ago

10.3390/vaccines9070719

Signatures of the Venezuelan Humanitarian Crisis in the First Wave of COVID-19: Fuel Shortages and Border Migration
Cited by: 8
Author(s): Margarita Lampo, Juan V Hernández-Villena, Jaime Cascante, María F. Vincenti-González, David A. Forero‐Peña, Maikell Segovia, Katie Hampson, Julio Castro, María Eugenia Grillet
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pcbi.1008409

Practical considerations for measuring the effective reproductive number, Rt
Cited by: 313
Author(s): Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, René Niehus, James A. Hay, Pablo Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse, Katharine Sherrat, Robin N Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey
Software Mentions: 2
Published: almost 4 years ago

10.1101/2020.06.18.20134858

Practical considerations for measuring the effective reproductive number, <i>R<sub>t</sub></i>
Cited by: 60
Author(s): Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, René Niehus, James A. Hay, Pablo Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse, Katharine Sherrat, Robin N Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey
Software Mentions: 2
Published: over 4 years ago

10.1098/rstb.2020.0283

Exploring surveillance data biases when estimating the reproduction number: with insights into subpopulation transmission of COVID-19 in England
Cited by: 27
Author(s): Katharine Sherratt, Sam Abbott, Sophie Meakin, Joel Hellewell, James D. Munday, Nikos I. Bosse, Mark Jit, Sebastian Funk
Software Mentions: 1
Published: over 3 years ago

10.3390/healthcare9091173

Effective Preventive Strategies to Prevent Secondary Transmission of COVID-19 in Hemodialysis Unit: The First Month of Community Outbreak in Taiwan
Cited by: 5
Author(s): Chun-Yu Chen, Jung-Jr Ye, Ting-Shuo Huang, Chin‐Chan Lee, Yih-Ting Chen, Cheng-Kai Hsu, Heng-Jung Hsu, Chiao‐Yin Sun, Heng‐Chih Pan, Kuo-Su Chen, Huang‐Kai Kao, Chun-Han Ko, Yun-Hsuan She, Chunying Wu, Chi-Chun Lai, Shiuh-Lin Hwang, I-Wen Wu
Software Mentions: 1
Published: about 3 years ago

10.1186/s12916-021-02107-0

Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data
Cited by: 19
Author(s): James D. Munday, Christopher I Jarvis, Amy Gimma, Kerry L. M. Wong, Kevin van Zandvoort, Yang Liu, Joel Hellewell, Nicholas Davies, C. Julian Villabona-Arenas, Rosalind M Eggo, Akira Endo, Nikos I. Bosse, Hamish Gibbs, Carl A. B. Pearson, Fiona Yueqian Sun, Mark Jit, Kathleen O’Reilly, Yalda Jafari, Katherine E. Atkins, Naomi R. Waterlow, Alicia Roselló, Yung-Wai Desmond Chan, Anna M Foss, Billy J Quilty, Timothy Russell, Stefan Flasche, Simon R. Procter, William Waites, Rosanna C. Barnard, Adam J. Kucharski, Thibaut Jombart, Graham Medley, Rachel Lowe, Fabienne Krauer, Damien C. Tully, Kiesha Prem, Jiayao Lei, Oliver J. Brady, Frank Sandmann, Sophie Meakin, Kaja Abbas, Gwenan M. Knight, Matthew Quaife, Mihály Koltai, Sam Abbott, Samuel Clifford, Sebastian Funk, W. John Edmunds
Software Mentions: 1
Published: about 3 years ago