Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: DataExplorer

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/DataExplorer

Automate Data Exploration and Treatment
11 versions
Latest release: almost 4 years ago
1 dependent package
11,358 downloads last month

Papers Mentioning DataExplorer 27

10.1038/s41598-021-90901-4
Characteristics of preoperative steroid profiles and glucose metabolism in patients with primary aldosteronism developing adrenal insufficiency after adrenalectomy
Cited by: 3
Author(s): Xiao Wang, Daniel A. Heinrich, Sonja Kunz, Nina Heger, Lisa Sturm, Olaf Uhl, Felix Beuschlein, Martín Reincke, Martin Bidlingmaier
Software Mentions: 13
Published: over 3 years ago
10.3390/medicina57010025
No Association between 25-Hydroxyvitamin D and Insulin Resistance or Thyroid Hormone Concentrations in a Romanian Observational Study
Cited by: 2
Author(s): Roxana Adriana Stoica, Cristian Guja, Anca Pantea Stoian, Raluca Ioana Ștefan-van Staden, Ioana Popa-Tudor, Simona Ştefan, Robert Ancuceanu, Cristian Serafinceanu, Constantin Ionescu Tîrgoviște
Software Mentions: 9
Published: almost 4 years ago
10.7554/eLife.48725
Tyr1 phosphorylation promotes phosphorylation of Ser2 on the C-terminal domain of eukaryotic RNA polymerase II by P-TEFb
Cited by: 21
Author(s): Joshua E. Mayfield, Seema Irani, Edwin E. Escobar, Zhao Zhang, Nathaniel T. Burkholder, Michelle Robinson, M. Rachel Mehaffey, Sarah N. Sipe, Weiwei Yang, Nicholas Adrian Prescott, Karan R. Kathuria, Zhijie Liu, Jennifer S. Brodbelt, Yan Zhang
Software Mentions: 2
Published: over 5 years ago
10.1186/1471-2105-11-518
Accurate peak list extraction from proteomic mass spectra for identification and profiling studies
Cited by: 11
Author(s): Nicola Barbarini, Paolo Magni
Software Mentions: 2
Published: about 14 years ago
10.3390/md12063449
Characterization of a Novel Conus bandanus Conopeptide Belonging to the M-Superfamily Containing Bromotryptophan
Cited by: 10
Author(s): Bao Nguyen, Jean-Pierre Le Caër, Gilles Mourier, Robert Thaï, Hung Lamthanh, Denis Servent, Évelyne Benoit, Jordi Molgó
Software Mentions: 1
Published: over 10 years ago
10.1186/1475-2859-11-152
Adaptative biochemical pathways and regulatory networks in Klebsiella oxytoca BAS-10 producing a biotechnologically relevant exopolysaccharide during Fe(III)-citrate fermentation
Cited by: 27
Author(s): Giuseppe Gallo, Franco Baldi, Giovanni Renzone, Michele Gallo, A Cordaro, Andrea Scaloni, Anna Maria Puglia
Software Mentions: 1
Published: almost 13 years ago
10.1186/1475-2859-6-25
Redox stress proteins are involved in adaptation response of the hyperthermoacidophilic archaeon Sulfolobus solfataricus to nickel challenge
Cited by: 12
Author(s): Anna Maria Salzano, Ferdinando Febbraio, Tiziana Farias, Giovanni Paolo Cetrangolo, Roberto Nucci, Andrea Scaloni, Giuseppe Manco
Software Mentions: 1
Published: over 17 years ago
10.1186/1475-2859-12-37
High throughput screening identifies disulfide isomerase DsbC as a very efficient partner for recombinant expression of small disulfide-rich proteins in E. coli
Cited by: 52
Author(s): Hervé Nozach, Carole Fruchart-Gaillard, François Fenaille, Fabrice Beau, Oscar Henrique Pereira Ramos, Badreddine Douzi, Natalie J. Saez, Mireille Moutiez, Denis Servent, Muriel Gondry, Robert Thaï, Philippe Cuniasse, Renaud Vincentelli, Vincent Dive
Software Mentions: 1
Published: almost 12 years ago
10.1186/s12934-016-0618-0
Gene design, fusion technology and TEV cleavage conditions influence the purification of oxidized disulphide-rich venom peptides in Escherichia coli
Cited by: 28
Author(s): Ana Filipa Sequeira, Jeremy Turchetto, Natalie J. Saez, Fanny Peysson, Laurie Ramond, Yoan Duhoo, Marilyne Blémont, Vânia O. Fernandes, L. T. Gama, L.M.A. Ferreira, Catarina I. P. I. Guerreiro, Nicolas Gilles, Hervé Darbon, Carlos M. G. A. Fontes, Renaud Vincentelli
Software Mentions: 1
Published: almost 8 years ago
10.1186/1475-2859-9-95
Differential proteomic analysis highlights metabolic strategies associated with balhimycin production in Amycolatopsis balhimycina chemostat cultivations
Cited by: 17
Author(s): Giuseppe Gallo, Rosa Alduina, Giovanni Renzone, Jette Thykær, Linda Bianco, Anna Eliasson-Lantz, Andrea Scaloni, Anna Maria Puglia
Software Mentions: 1
Published: almost 15 years ago
10.3390/molecules25246054
Synthesis and Matrix Properties of α-Cyano-5-phenyl-2,4-pentadienic Acid (CPPA) for Intact Proteins Analysis by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry
Cited by: 7
Author(s): Antonio Monopoli, Angelo Nacci, Tommaso R. I. Cataldi, Cosima Damiana Calvano
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0107250
Caenorhabditis elegans Bacterial Pathogen Resistant bus-4 Mutants Produce Altered Mucins
Cited by: 22
Author(s): Lisa M. Parsons, Mizanur Rahman, Ewa A. Jankowska, Jonathan Hodgkin, Delia O’Rourke, Dave Stroud, Salil Ghosh, John F. Cipollo
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0142376
Lactobacillus acidophilus—Rutin Interplay Investigated by Proteomics
Cited by: 15
Author(s): Maria Fiorella Mazzeo, Rosa Lippolis, Annarita Sorrentino, Sarah Liberti, Fragnito Federica, Rosa Anna Siciliano
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0042688
CSF N-Glycan Profiles to Investigate Biomarkers in Brain Developmental Disorders: Application to Leukodystrophies Related to eIF2B Mutations
Cited by: 22
Author(s): Anne Fogli, Christine Merle, Véronique Roussel, Raphael Schiffmann, Sylvie Ughetto, Manfred Theisen, Odile Boespflug‐Tanguy
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0170013
Comprehensive N-Glycan Profiling of Cetuximab Biosimilar Candidate by NP-HPLC and MALDI-MS
Cited by: 19
Author(s): Sheng Liu, Wenjie Gao, Yao Wang, Zhen-Yu He, Xiaojun Feng, Bi‐Feng Liu, Xin Liu
Software Mentions: 1
Published: almost 8 years ago
10.1080/14756366.2017.1292262
Differential representation of liver proteins in obese human subjects suggests novel biomarkers and promising targets for drug development in obesity
Cited by: 12
Author(s): Simonetta Caira, Antonio Iannelli, Rosaria Sciarrillo, Gianluca Picariello, Giovanni Renzone, Andrea Scaloni, Pietro Addeo
Software Mentions: 1
Published: almost 8 years ago
10.1186/1477-5956-10-73
Wounding, insect chewing and phloem sap feeding differentially alter the leaf proteome of potato, Solanum tuberosum L.
Cited by: 27
Author(s): Marc‐Olivier Duceppe, Conrad Cloutier, Dominique Michaud
Software Mentions: 1
Published: almost 12 years ago
10.1186/1477-5956-11-28
Comparative secretome analysis of four isogenic Bacillus clausii probiotic strains
Cited by: 25
Author(s): Rosa Lippolis, Rosa Anna Siciliano, Maria Fiorella Mazzeo, Anna Abbrescia, Antonio Gnoni, Anna Maria Sardanelli, Sergio Papa
Software Mentions: 1
Published: almost 12 years ago
10.3390/proteomes1020040
Serum Proteome Analysis for Profiling Predictive Protein Markers Associated with the Severity of Skin Lesions Induced by Ionizing Radiation
Cited by: 15
Author(s): Thibault Chaze, Louis Hornez, Christophe Chambon, Iman Haddad, Joëlle Vinh, Jean‐Philippe Peyrat, Marc Benderitter, Olivier Guipaud
Software Mentions: 1
Published: over 11 years ago
10.1038/s41598-017-06660-8
DMF-MALDI: droplet based microfluidic combined to MALDI-TOF for focused peptide detection
Cited by: 16
Author(s): Kiarach Mesbah, Robert Thaï, Sarah Bregant, Florent Malloggi
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-021-95309-8
An apocrine mechanism delivers a fully immunocompetent exocrine secretion
Cited by: 2
Author(s): Denisa Beňová-Liszeková, Lucia Mentelová, Klaudia Babišová, Milan Beňo, Tibor Pechan, Bruce A. Chase, Róbert Farkas
Software Mentions: 1
Published: over 3 years ago
10.3390/ijms18020131
N-Glycoprofiling Analysis for Carbohydrate Composition and Site-Occupancy Determination in a Poly-Glycosylated Protein: Human Thyrotropin of Different Origins
Cited by: 4
Author(s): M.T.C.P. Ribela, Renata Damiani, Felipe D. Silva, Eliana R. Lima, João Ezequiel de Oliveira, Cibele N. Peroni, Peter A. Torjesen, Carlos R.J. Soares, Paolo Bartolini
Software Mentions: 1
Published: almost 8 years ago
10.3390/antib7010001
Controlling the Glycosylation Profile in mAbs Using Time-Dependent Media Supplementation
Cited by: 19
Author(s): Devesh Radhakrishnan, Anne S. Robinson, Babatunde A. Ogunnaike
Software Mentions: 1
Published: almost 7 years ago
10.1111/jth.13445
Conformational quiescence of ADAMTS‐13 prevents proteolytic promiscuity
Cited by: 24
Author(s): Kieron South, Marta O. Freitas, David A. Lane
Software Mentions: 1
Published: about 8 years ago
10.1186/1471-2164-14-515
Transcriptomic and proteomic analysis of a compatible tomato-aphid interaction reveals a predominant salicylic acid-dependent plant response
Cited by: 72
Author(s): Vincenzo Coppola, Mariangela Coppola, Mariapina Rocco, M. Cristina Digilio, Chiara D’Ambrosio, Giovanni Renzone, Rosanna Martinelli, Andrea Scaloni, Francesco Pennacchio, Rosa Rao, Giuseppe Colla
Software Mentions: 1
Published: over 11 years ago
10.1186/s12864-016-2369-z
Elucidating the molecular physiology of lantibiotic NAI-107 production in Microbispora ATCC-PTA-5024
Cited by: 10
Author(s): Giuseppe Gallo, Giovanni Renzone, Emilia Palazzotto, Paolo Monciardini, Simona Arena, Teresa Faddetta, Anna Giardina, Rosa Alduina, Tilmann Weber, F Sangiorgi, Alessandro Russo, Giovanni Spinelli, Margherita Sosio, Andrea Scaloni, Anna Maria Puglia
Software Mentions: 1
Published: almost 9 years ago
10.1186/1754-6834-1-18
Comparative secretome analyses of two Trichoderma reesei RUT-C30 and CL847 hypersecretory strains
Cited by: 239
Author(s): Isabelle Herpoël-Gimbert, Antoine Margeot, Alain Dolla, Gwénaël Jan, Daniel Mollé, Sabrina Lignon, Hugues Mathis, Jean‐Claude Sigoillot, Frédéric Monot, Marcel Asther
Software Mentions: 1
Published: almost 17 years ago