cran: DAP | Projects | Ecosyste.ms: Papers

10.1371/journal.pcbi.1006269

Evaluating reproducibility of AI algorithms in digital pathology with DAPPER
Cited by: 43
Author(s): Andrea Bizzego, Nicole Bussola, Marco Chierici, Valerio Maggio, Margherita Francescatto, Luca Cima, Marco Cristoforetti, Giuseppe Jurman, Cesare Furlanello
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0244846

FOSTER—An R package for forest structure extrapolation
Cited by: 3
Author(s): Martin Queinnec, Piotr Tompalski, Douglas K. Bolton, Nicholas C. Coops
Software Mentions: 6
Published: almost 4 years ago

10.1371/journal.pgen.1009455

MRLocus: Identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity
Cited by: 19
Author(s): Anqi Zhu, Nana Matoba, Emmaleigh Wilson, Amanda L. Tapia, Yun Li, Joseph G. Ibrahim, Jason L. Stein, Michael I. Love
Software Mentions: 5
Published: over 3 years ago

10.3390/ijms22041661

Genome-Wide Identification and Expression Analysis of OsbZIP09 Target Genes in Rice Reveal Its Mechanism of Controlling Seed Germination
Cited by: 9
Author(s): Chen Zhu, Chu-Xin Wang, Chen-Ya Lu, Jin-Dong Wang, Yu Zhou, Min Xiong, Changquan Zhang, Qiaoquan Liu
Software Mentions: 4
Published: almost 4 years ago

10.3389/fonc.2020.01065

Integrative Network Fusion: A Multi-Omics Approach in Molecular Profiling
Cited by: 28
Author(s): Marco Chierici, Nicole Bussola, Alessia Marcolini, Margherita Francescatto, Alessandro Zandonà, Lucia Trastulla, Claudio Agostinelli, Giuseppe Jurman, Cesare Furlanello
Software Mentions: 4
Published: over 4 years ago

10.7554/eLife.38309

High N-glycan multiplicity is critical for neuronal adhesion and sensitizes the developing cerebellum to N-glycosylation defect
Cited by: 41
Author(s): Daniel Medina-Cano, Ekin Ucuncu, Lam Son Nguyen, Michaël Nicouleau, Joanna Lipecka, Jean-Charles Bizot, Christian Thiel, François Foulquier, Nathalie Lefort, Catherine Faivre‐Sarrailh, Laurence Colleaux, Ida Chiara Guerrera, Vincent Cantagrel
Software Mentions: 3
Published: about 6 years ago

10.1534/g3.117.043752

Constraints on eQTL Fine Mapping in the Presence of Multisite Local Regulation of Gene Expression
Cited by: 23
Author(s): Biao Zeng, Luke R. Lloyd‐Jones, Alexander Holloway, Urko M. Marigorta, Andres Metspalu, Grant W. Montgomery, Tõnu Esko, Kenneth L. Brigham, Arshed A Quyyumi, Youssef Idaghdour, Jian Yang, Peter M. Visscher, Joseph E. Powell, Greg Gibson
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pcbi.1007829

Improving the coverage of credible sets in Bayesian genetic fine-mapping
Cited by: 30
Author(s): Anna Hutchinson, Hope Watson, Chris Wallace
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0242453

Data analysis and modeling pipelines for controlled networked social science experiments
Cited by: 2
Author(s): Vanessa Cedeno-Mieles, Zhihao Hu, Yihui Ren, Xinwei Deng, Noshir Contractor, Saliya Ekanayake, Joshua M. Epstein, Brian J. Goode, Gizem Korkmaz, Chris J. Kuhlman, Dustin Machi, Michael W. Macy, Madhav V. Marathe, Naren Ramakrishnan, Parang Saraf, Nathan Self
Software Mentions: 2
Published: about 4 years ago

10.36660/abc.20190391

Treino de Força Reduz Stress Oxidativo Cardíaco e Renal em Ratos com Hipertensão Renovascular
Cited by: 4
Author(s): Rodrigo Miguel-dos-Santos, João Filipe Santos, Fabrício Nunes Macedo, Anderson Carlos Marçal, Valter Joviniano de Santana Filho, Rogério Brandão Wichi, Sandra Lauton-Santos
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13059-020-02026-y

PTWAS: investigating tissue-relevant causal molecular mechanisms of complex traits using probabilistic TWAS analysis
Cited by: 41
Author(s): Yuhua Zhang, Corbin Quick, Ketian Yu, Alvaro N. Barbeira, Francesca Luca, Roger Piqué-Regi, Hae Kyung Im, Xiaoquan Wen
Software Mentions: 2
Published: over 4 years ago

10.1186/s13059-021-02353-8

MARS: leveraging allelic heterogeneity to increase power of association testing
Cited by: 2
Author(s): Farhad Hormozdiari, Junghyun Jung, Eleazar Eskin, Jong Wha J. Joo
Software Mentions: 2
Published: over 3 years ago

10.1093/texcom/tgab003

Brain Activation during Thoughts of One’s Own Death and Its Linear and Curvilinear Correlations with Fear of Death in Elderly Individuals: An fMRI Study
Cited by: 2
Author(s): Kanan Hirano, Kentaro Oba, Toshiki Saito, Shohei Yamazaki, Ryuta Kawashima, Motoaki Sugiura
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0208924

Distillation of the clinical algorithm improves prognosis by multi-task deep learning in high-risk Neuroblastoma
Cited by: 17
Author(s): Valerio Maggio, Marco Chierici, Giuseppe Jurman, Cesare Furlanello
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0225506

General practitioners’ perceptions of delayed antibiotic prescription for respiratory tract infections: A phenomenographic study
Cited by: 10
Author(s): Erika A. Saliba‐Gustafsson, Marta Röing, Michael Borg, Senia Rosales-Klintz, Cecilia Stålsby Lundborg
Software Mentions: 2
Published: about 5 years ago

10.1186/1471-2105-11-485

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
Cited by: 1,148
Author(s): Murray P. Cox, Daniel A. Peterson, Patrick J. Biggs
Software Mentions: 2
Published: over 14 years ago

10.1186/s13063-018-3072-y

Development of a core outcome set for diabetes after pregnancy prevention interventions (COS-DAP): a study protocol
Cited by: 11
Author(s): Karoline Kragelund Nielsen, Sharleen O’Reilly, Nancy Wu, Kaberi Dasgupta, Helle Terkildsen Maindal
Software Mentions: 2
Published: about 6 years ago

10.3389/fpsyg.2021.678091

Validation of a Tool to Evaluate Drug Prevention Programs Among Students
Cited by: 11
Author(s): Patrícia Paiva de Oliveira Galvão, Juliana Y. Valente, Jacqueline N. Millon, Márcia Helena da Silva Melo, Sheila C. Caetano, Hugo Cogo-Moreira, Jair J. Mari, Zila M. Sanchez
Software Mentions: 1
Published: over 3 years ago

10.1080/16549716.2017.1381462

Paid staff or volunteers – does it make a difference? The impact of staffing on child outcomes for children attending community-based programmes in South Africa and Malawi
Cited by: 14
Author(s): Mark Tomlinson, Lorraine Sherr, Ana Macedo, Xanthe Hunt, Sarah Skeen
Software Mentions: 1
Published: almost 8 years ago

10.3390/jcm8091349

Long Non-Coding RNAs Modulate Sjögren’s Syndrome Associated Gene Expression and Are Involved in the Pathogenesis of the Disease
Cited by: 18
Author(s): Marzia Dolcino, Elisa Tinazzi, Claudio Vitali, Nicoletta Del Papa, Antonio Puccetti, Claudio Lunardi
Software Mentions: 1
Published: over 5 years ago

10.3390/polym13010123

Manufacturing and Characterization of Hybrid Bulk Voxelated Biomaterials Printed by Digital Anatomy 3D Printing
Cited by: 12
Author(s): Hyeonu Heo, Yuqi Jin, Deng‐Tao Yang, Christopher G. Wier, Aaron Minard, Narendra B. Dahotre, Arup Neogi
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-94992-x

Torpor enhances synaptic strength and restores memory performance in a mouse model of Alzheimer’s disease
Cited by: 4
Author(s): Christina F de Veij Mestdagh, Jaap Timmerman, Frank Koopmans, Iryna Paliukhovich, Suzanne S M Miedema, Maaike Goris, Rolinka J. van der Loo, Guido Krenning, Ka Wan Li, Huibert D. Mansvelder, August B. Smit, Robert H. Henning, Ronald E. van Kesteren
Software Mentions: 1
Published: over 3 years ago

10.3390/s18082485

Attributes’ Importance for Zero-Shot Pose-Classification Based on Wearable Sensors
Cited by: 15
Author(s): Haruhiko Ohashi, Mohammad Al-Naser, Sheraz Ahmed, Katsuyuki Nakamura, Toshiki Sato, Andreas Dengel
Software Mentions: 1
Published: over 6 years ago

10.3390/s19081934

UAV-Based Digital Terrain Model Generation under Leaf-Off Conditions to Support Teak Plantations Inventories in Tropical Dry Forests. A Case of the Coastal Region of Ecuador
Cited by: 23
Author(s): Fernando J. Aguilar, José R. Rivas, Abderrahim Nemmaoui, Alberto Peñalver, Manuel A. Aguilar
Software Mentions: 1
Published: over 5 years ago

10.3390/s20185391

Development of a Robust Multi-Scale Featured Local Binary Pattern for Improved Facial Expression Recognition
Cited by: 10
Author(s): Suraiya Yasmin, Refat Khan Pathan, Munmun Biswas, Mayeen Uddin Khandaker, Mohammad Rashed Iqbal Faruque
Software Mentions: 1
Published: over 4 years ago

10.1155/2013/601450

Use of Oral Anticoagulation Therapy in Atrial Fibrillation after Stroke: Results from a Nationwide Registry
Cited by: 15
Author(s): Stine Funder Jespersen, Louisa Christensen, Anders Lyhne Christensen, Hanne Christensen
Software Mentions: 1
Published: about 11 years ago

10.1155/2016/9489036

Postoperative Corneal and Surgically Induced Astigmatism following Superior Approach Manual Small Incision Cataract Surgery in Patients with Preoperative Against-the-Rule Astigmatism
Cited by: 15
Author(s): Edmund Arthur, Ahmed Abdul Sadik, David Ben Kumah, Eugene Appenteng Osae, Felix Agyemang Mireku, Frank Yeboah Asiedu, Reynolds Kwame Ablordeppey
Software Mentions: 1
Published: almost 9 years ago

10.1002/nop2.635

Undergraduate nursing students’ knowledge, attitudes and self‐efficacy regarding palliative care in China: A descriptive correlational study
Cited by: 35
Author(s): Ya‐Qun Zhou, Qiao Li, Wei Zhang
Software Mentions: 1
Published: about 4 years ago

10.1186/1472-6785-11-24

Expression plasticity of Phlebotomus papatasi salivary gland genes in distinct ecotopes through the sand fly season
Cited by: 11
Author(s): Iliano V. Coutinho-Abreu, Rami Mukbel, Hanafi A. Hanafi, Emadeldin Y. Fawaz, Shabaan S. El-Hossary, Mariha Wadsworth, Gwen Stayback, Dilkushi de Alwis Pitts, Mahmoud N. Abo‐Shehada, David F. Hoel, Shaden Kamhawi, Marcelo Ramalho-Ortigão, Mary Ann McDowell
Software Mentions: 1
Published: about 13 years ago

10.1186/s12909-017-0968-2

Improvement of medical content in the curriculum of biomedical engineering based on assessment of students outcomes
Cited by: 4
Author(s): Enas Abdulhay, Ruba Khnouf, Shireen Haddad, Areen K. Al-Bashir
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2288-13-8

Selecting optimal screening items for delirium: an application of item response theory
Cited by: 13
Author(s): Frances M. Yang, Richard N. Jones, Sharon K. Inouye, Douglas Tommet, Paul K. Crane, James L. Rudolph, Long Ngo, Edward R. Marcantonio
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12904-021-00846-8

Association between attitude towards death and spiritual care competence of Chinese oncology nurses: a cross-sectional study
Cited by: 6
Author(s): Li Liujin, Jingmin Lv, Lingling Zhang, Yang Song, Ying Zhou, Jiaxian Liu
Software Mentions: 1
Published: over 3 years ago

10.1186/s12887-017-0883-z

Could cash and good parenting affect child cognitive development? A cross-sectional study in South Africa and Malawi
Cited by: 21
Author(s): Lorraine Sherr, Ana Macedo, Mark Tomlinson, Sarah Skeen, Lucie Cluver
Software Mentions: 1
Published: over 7 years ago

10.1186/s40359-019-0336-6

German version of the Death Attitudes Profile- Revised (DAP-GR) – translation and validation of a multidimensional measurement of attitudes towards death
Cited by: 12
Author(s): Jonas Jansen, Christian Schulz-Quach, Nikolett Eisenbeck, David F. Carreno, Andrea Schmitz, Rita Fountain, Matthias Franz, Ralf B. Schäfer, Paul T. P. Wong, Katharina Fetz
Software Mentions: 1
Published: over 5 years ago

10.1155/2019/3107692

A Questionnaire Study on the Attitude towards Death of the Nursing Interns in Eight Teaching Hospitals in Jiangsu, China
Cited by: 24
Author(s): Fengqin Xu, Kun Huang, Yinhe Wang, Yuzi Xu, Liang Ma, Yang Cao
Software Mentions: 1
Published: over 5 years ago

10.1186/s13068-019-1579-4

Optimal integration of microalgae production with photovoltaic panels: environmental impacts and energy balance
Cited by: 33
Author(s): Marjorie Morales, Arnaud Hélias, Olivier Bernard
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0192743

Habitat selection and seasonal movements of young bearded seals (Erignathus barbatus) in the Bering Sea
Cited by: 25
Author(s): Michael F. Cameron, Kathryn J. Frost, Jay M. Ver Hoef, Greg A. Breed, Alex Whiting, John Goodwin, Peter L. Boveng
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0214960

LurR is a regulator of the central lactate oxidation pathway in sulfate-reducing Desulfovibrio species
Cited by: 3
Author(s): Lara Rajeev, Eric G. Luning, Grant M. Zane, Thomas R. Juba, Alexey E. Kazakov, Pavel S. Novichkov, Judy D. Wall, Aindrila Mukhopadhyay
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0208072

The role of normative beliefs in the mediation of a school-based drug prevention program: A secondary analysis of the #Tamojunto cluster-randomized trial
Cited by: 9
Author(s): Zila M. Sanchez, Juliana Y. Valente, Thiago M. Fidalgo, Ana Paula Barreto Leal, Pollyanna Fausta Pimentel de Medeiros, Hugo Cogo-Moreira
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0028239

The Nubian Complex of Dhofar, Oman: An African Middle Stone Age Industry in Southern Arabia
Cited by: 178
Author(s): Jeffrey I. Rose, Vitaly I. Usik, Anthony E. Marks, Yamandú H. Hilbert, Christopher S. Galletti, Ash Parton, Jeanne Marie Geiling, Viktor Černý, Mike W. Morley, Richard G. Roberts
Software Mentions: 1
Published: about 13 years ago

10.1007/s10578-020-01058-6

Validity of the Draw a Person: A Quantitative Scoring System (DAP:QSS) for Clinically Evaluating Intelligence
Cited by: 2
Author(s): Alda Troncone, Annalisa Chianese, Alfonso di Leva, Maddalena Grasso, Crescenzo Cascella
Software Mentions: 1
Published: over 4 years ago

10.1002/ece3.4708

Connecting paths between juvenile and adult habitats in the Atlantic green turtle using genetics and satellite tracking
Cited by: 19
Author(s): Philippine Chambault, Benoı̂t de Thoisy, Maïlis Huguin, Jordan Martin, Marc Bonola, Denis Etienne, Julie Gresser, Gaëlle Hiélard, Julien Mailles, Fabien Védie, Cyrille Barnérias, Emmanuel Sutter, Blandine Guillemot, Émilie Dumont‐Dayot, Sidney Régis, Nicolas Lecerf, Fabien Lefèbvre, Cédric Frouin, Nathalie Aubert, Christelle Guimera, Robinson Bordes, Laurent Thieulle, M. Duru, Myriam Bouaziz, Adrien Pinson, Frédéric Flora, Patrick Quénéhervé, Thierry Woignier, Jean-Pierre Allénou, Nicolas Cimiterra, Abdelwahab Benhalilou, Céline Murgale, Thomas Maillet, Luc Rangon, Noémie Chanteux, Bénédicte Chanteur, Christelle Béranger, Yvon Le Maho, Odile Petit, Damien Chevallier
Software Mentions: 1
Published: about 6 years ago

10.3389/fgene.2018.00077

Determining Genetic Causal Variants Through Multivariate Regression Using Mixture Model Penalty
Cited by: 2
Author(s): V. S. Sundar, Chun-Chieh Fan, Dominic Holland, Anders M. Dale
Software Mentions: 1
Published: almost 7 years ago

10.3389/fnut.2018.00078

The Development and Validation of Food Atlas for Portion Size Estimation in the Balkan Region
Cited by: 28
Author(s): Marina Nikolić, Jelena Milešević, Milica Zeković, Mirjana Gurinović, Marija Glibetić
Software Mentions: 1
Published: over 6 years ago

Projects: cran: DAP

Papers Mentioning DAP 45