Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: DA

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/DA

Discriminant Analysis for Evolutionary Inference
1 version
Latest release: over 3 years ago
176 downloads last month

Papers Mentioning DA 1,541

10.3390/cancers12102842
(2R,3S)-Dihydroxybutanoic Acid Synthesis as a Novel Metabolic Function of Mutant Isocitrate Dehydrogenase 1 and 2 in Acute Myeloid Leukemia
Cited by: 6
Author(s): Jeffrey R. Idle, Katja Seipel, Ulrike Bacher, Thomas Pabst, Diren Beyoğlu
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0250458
Increasing prediction accuracy of pathogenic staging by sample augmentation with a GAN
Cited by: 8
Author(s): Chang‐Hyuk Kwon, Sangjin Park, Soohyun Ko, Jaegyoon Ahn
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0198116
A pharmaco-metabolomics approach in a clinical trial of ALS: Identification of predictive markers of progression
Cited by: 53
Author(s): Hélène Blasco, Franck Patin, Amandine Descat, Guillaume Garçon, Philippe Corcia, Patrick Gelé, Timothée Lenglet, Peter Bede, Vincent Meininger, David Devos, Jean François Gossens, Pierre‐François Pradat
Software Mentions: 2
Published: over 6 years ago
10.1186/s40168-020-00967-x
A semi-tryptic peptide centric metaproteomic mining approach and its potential utility in capturing signatures of gut microbial proteolysis
Cited by: 6
Author(s): Zhixiang Yan, Feixiang He, Fei Xiao, Huanhuan He, Dan Li, Cong Li, Lin Lü, Huijin Zhu, Yanyan Wu, Ru Yan, Xiaofeng Li, Hong Shan
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0061578
Feasibility of MR Metabolomics for Immediate Analysis of Resection Margins during Breast Cancer Surgery
Cited by: 59
Author(s): Tone Frost Bathen, Brigitte Geurts, Beathe Sitter, Hans E. Fjøsne, Steinar Lundgren, L.M.C. Buydens, Ingrid S. Gribbestad, G.J. Postma, Guro F. Giskeødegård
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0113924
IgG Antibodies to Cyclic Citrullinated Peptides Exhibit Profiles Specific in Terms of IgG Subclasses, Fc-Glycans and a Fab-Peptide Sequence
Cited by: 31
Author(s): Susanna L. Lundström, Cátia Fernandes‐Cerqueira, A. Jimmy Ytterberg, Elena Ossipova, Aase Hensvold, Per‐Johan Jakobsson, Vivianne Malmström, Anca I. Catrina, Lars Klareskog, Karin Lundberg, Roman A. Zubarev
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0227235
Color discrimination and gas chromatography-mass spectrometry fingerprint based on chemometrics analysis for the quality evaluation of Schizonepetae Spica
Cited by: 7
Author(s): Xindan Liu, Ying Zhang, Menghua Wu, Zhiguo Ma, Hui Cao
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0051712
HR-MAS MR Spectroscopy of Breast Cancer Tissue Obtained with Core Needle Biopsy: Correlation with Prognostic Factors
Cited by: 48
Author(s): Ji Soo Choi, Hyeon Man Baek, Suhkmann Kim, Min Jung Kim, Ji Hyun Youk, Hee Jung Moon, Kyunghwa Han, Dong hyun Kim, Kyung Sik Kim, Ja Seung Koo
Software Mentions: 2
Published: almost 12 years ago
10.1371/journal.pone.0137919
The Rules of Aggression: How Genetic, Chemical and Spatial Factors Affect Intercolony Fights in a Dominant Species, the Mediterranean Acrobat Ant Crematogaster scutellaris
Cited by: 34
Author(s): Filippo Frizzi, Claudio Ciofi, Leonardo Dapporto, Chiara Natali, Guido Chelazzi, Stefano Turillazzi, Giacomo Santini
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0193507
Disentangling factors that shape the gut microbiota in German Shepherd dogs
Cited by: 31
Author(s): Åsa Vilson, Ziad Ramadan, Qinghong Li, Åke Hedhammar, Arleigh J. Reynolds, Julie K. Spears, Jeff Labuda, Robyn Pelker, Bengt Björkstén, Johan Dicksved, Helene Hansson-Hamlin
Software Mentions: 2
Published: over 6 years ago
10.1002/advs.201800341
Screening Small Metabolites from Cells as Multifunctional Coatings Simultaneously Improves Nanomaterial Biocompatibility and Functionality
Cited by: 8
Author(s): Anqi Sun, Zhan Ban, Mu Li, Xiangang Hu
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0209913
Metabolic consequences of discretionary fortified beverage consumption containing excessive vitamin B levels in adolescents
Cited by: 6
Author(s): Shyamchand Mayengbam, Heidi Virtanen, Dustin S. Hittel, Charlene Elliott, Raylene A. Reimer, Hans J. Vogel, Jane Shearer
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0137927
Two of Them Do It Better: Novel Serum Biomarkers Improve Autoimmune Hepatitis Diagnosis
Cited by: 9
Author(s): Saveria Mazzara, Antonia Sinisi, Angela Cardaci, Riccardo L. Rossi, Luigi Muratori, Sergio Abrignani, Mauro Bombaci
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0161038
The Role of High-Resolution Magic Angle Spinning 1H Nuclear Magnetic Resonance Spectroscopy for Predicting the Invasive Component in Patients with Ductal Carcinoma In Situ Diagnosed on Preoperative Biopsy
Cited by: 23
Author(s): Eun Young Chae, Hee Jung Shin, Suhkmann Kim, Hyeon‐Man Baek, Dahye Yoon, Siwon Kim, Ye Eun Shim, Hak Hee Kim, Joo Hee, Woo Jung Choi, Jeong Hyun Lee, Ji Hoon Shin, Hee Jin Lee, Gyungyub Gong
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0046579
Fishy Aroma of Social Status: Urinary Chemo-Signalling of Territoriality in Male Fathead Minnows (Pimephales promelas)
Cited by: 30
Author(s): Dalma Martinović-Weigelt, Drew R. Ekman, Daniel L. Villeneuve, Channing M. James, Quincy Teng, Timothy W. Collette, Gerald T. Ankley
Software Mentions: 2
Published: about 12 years ago
10.1371/journal.pone.0237194
Bacillus simplex treatment promotes soybean defence against soybean cyst nematodes: A metabolomics study using GC-MS
Cited by: 8
Author(s): Wen-Shu Kang, Lijie Chen, Yuanyuan Wang, Xiaofeng Zhu, Xiaoyu Liu, Haiyan Fan, Yuxi Duan
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0032737
Defects in Mitochondrial Dynamics and Metabolomic Signatures of Evolving Energetic Stress in Mouse Models of Familial Alzheimer's Disease
Cited by: 217
Author(s): Eugenia Trushina, Emirhan Nemutlu, Song Zhang, Trace Christensen, Jon J. Camp, Janny Mesa, Ammar Ahmed Siddiqui, Yasushi Tamura, Hiromi Sesaki, Thomas M. Wengenack, Petras P. Dzeja, Joseph F. Poduslo
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pone.0232351
Identification of developmental disorders including autism spectrum disorder using salivary miRNAs in children from Bosnia and Herzegovina
Cited by: 23
Author(s): Emir Šehović, Lemana Spahić, Lejla Smajlović-Skenderagić, Nirvana Pištoljević, Eldin Dzanko, Aida Hajdarpašić
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0201226
Cognitive behaviour treatment of co-occurring depression and generalised anxiety in routine clinical practice
Cited by: 5
Author(s): Roz Shafran, Abigail L. Wroe, Sasha Nagra, Eleni Pissaridou, Anna Coughtrey
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0148134
Predicting Flow Reversals in a Computational Fluid Dynamics Simulated Thermosyphon Using Data Assimilation
Cited by: 3
Author(s): Andrew J. Reagan, Yves Dubief, Peter Sheridan Dodds, Christopher M. Danforth
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0148824
An Integrated Metabolomic and Microbiome Analysis Identified Specific Gut Microbiota Associated with Fecal Cholesterol and Coprostanol in Clostridium difficile Infection
Cited by: 85
Author(s): Vijay C. Antharam, Daniel C. McEwen, Timothy J. Garrett, Aaron T. Dossey, Eric C. Li, Andrew Kozlov, Zhubene Mesbah, Gary P. Wang
Software Mentions: 2
Published: almost 9 years ago
10.1007/s11306-014-0689-z
Chemometric evaluation of Saccharomyces cerevisiae metabolic profiles using LC–MS
Cited by: 47
Author(s): Mireia Farrés, Benjamı́n Piña, Romà Tauler
Software Mentions: 2
Published: over 10 years ago
10.1111/1751-7915.12428
Wine microbiology is driven by vineyard and winery anthropogenic factors
Cited by: 61
Author(s): Cédric Grangeteau, Chloé Roullier-Gall, Sandrine Rousseaux, Régis D. Gougeon, Philippe Schmitt‐Kopplin, Hervé Alexandre, Michèle Guilloux-Bénatier
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0036670
Simple, Fast and Accurate Implementation of the Diffusion Approximation Algorithm for Stochastic Ion Channels with Multiple States
Cited by: 32
Author(s): Patricio Orio, Daniel Soudry
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pone.0193883
Application of metabolomics in prediction of lymph node metastasis in papillary thyroid carcinoma
Cited by: 14
Author(s): Ji Won Seo, Kyunghwa Han, Jandee Lee, Min Jung Kim, Hee Jung Moon, Jung Hyun Yoon, Vivian Youngjean Park, Hyeon Man Baek, Jin Young Kwak
Software Mentions: 2
Published: over 6 years ago
10.1186/s40168-020-00955-1
Understanding the host-microbe interactions using metabolic modeling
Cited by: 32
Author(s): Jack Jansma, Sahar El Aidy
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0200658
NMR-based metabolic profiling of urine, serum, fecal, and pancreatic tissue samples from the Ptf1a-Cre; LSL-KrasG12D transgenic mouse model of pancreatic cancer
Cited by: 9
Author(s): Michelle Jordan Schmahl, Daniel Regan, Adam C. Rivers, William C Joesten, Michael A. Kennedy
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0142840
Proton Nuclear Magnetic Resonance-Spectroscopic Discrimination of Wines Reflects Genetic Homology of Several Different Grape (V. vinifera L.) Cultivars
Cited by: 20
Author(s): Boran Hu, Yaqing Yue, Yong Zhu, Wen Wen, Fengmin Zhang, Jim Hardie
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0103533
Effects of a Honeybee Sting on the Serum Free Amino Acid Profile in Humans
Cited by: 19
Author(s): Jan Matysiak, Paweł Dereziński, Agnieszka Klupczyńska, Joanna Matysiak, Elżbieta Kaczmarek, Zenon J. Kokot
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0097615
How Subtle Is the “Terroir” Effect? Chemistry-Related Signatures of Two “Climats de Bourgogne”
Cited by: 55
Author(s): Chloé Roullier-Gall, Marianna Lucio, Laurence Noret, Philippe Schmitt‐Kopplin, Régis D. Gougeon
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0083866
Magnetic Resonance Metabolic Profiling of Breast Cancer Tissue Obtained with Core Needle Biopsy for Predicting Pathologic Response to Neoadjuvant Chemotherapy
Cited by: 40
Author(s): Ji Soo Choi, Hyeon Man Baek, Suhkmann Kim, Min Jung Kim, Ji Hyun Youk, Hee Jung Moon, Youn Ki Nam
Software Mentions: 2
Published: almost 11 years ago
10.3390/metabo11080472
Metagenomic, Metabolomic, and Functional Evaluation of Kimchi Broth Treated with Light-Emitting Diodes (LEDs)
Cited by: 2
Author(s): Yeong Ji Oh, Ye-Rin Park, Jungil Hong, Do-Yup Lee
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0211237
Discovery of potential ovicidal natural products using metabolomics
Cited by: 18
Author(s): Dyego Gonçalves Lino Borges, Jéssica Teles Echeverria, Tamires Lima de Oliveira, Rafael Pereira Heckler, Mariana Green de Freitas, Geraldo Alves Damasceno-Júnior, Carlos Alexandre Carollo, Fernando de Almeida Borges
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0219557
Effect of live yeast Saccharomyces cerevisiae supplementation on the performance and cecum microbial profile of suckling piglets
Cited by: 41
Author(s): Tadele G. Kiros, Diana Luise, Hooman Derakhshani, Renée M. Petri, Paolo Trevisi, Romain d'Inca, Eric Auclair, Andrew G. Van Kessel
Software Mentions: 2
Published: over 5 years ago
10.3390/metabo11080535
Four Weeks of Probiotic Supplementation Alters the Metabolic Perturbations Induced by Marathon Running: Insight from Metabolomics
Cited by: 4
Author(s): Jamie N. Pugh, Marie M. Phelan, Eva Caamaño-Gutiérrez, Albert K. Sparks, James P. Morton, Graeme L. Close, Daniel J. Owens
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0140769
Effect of Elevated Atmospheric CO2 and Temperature on the Disease Severity of Rocket Plants Caused by Fusarium Wilt under Phytotron Conditions
Cited by: 24
Author(s): Walter Chitarra, Ilenia Siciliano, Ilario Ferrocino, M. L. Gullino, A. Garibaldi
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0063644
Identification of Altered Metabolic Pathways in Plasma and CSF in Mild Cognitive Impairment and Alzheimer’s Disease Using Metabolomics
Cited by: 338
Author(s): Eugenia Trushina, Tumpa Dutta, Xuan Mai T. Persson, Michelle M. Mielke, Ronald C. Petersen
Software Mentions: 2
Published: over 11 years ago
10.1063/5.0041227
Investigation of the hepatic development in the coculture of hiPSCs-derived LSECs and HLCs in a fluidic microenvironment
Cited by: 7
Author(s): Mathieu Danoy, Yannick Tauran, Stéphane Poulain, Rachid Jellali, Johanna Bruce, Marjorie Leduc, Morgane Le Gall, Yuta Koui, Hiroshi Arakawa, Françoise Gilard, Bertrand Gakière, Yukio Kato, Charles Plessy, Taketomo Kido, Atsushi Miyajima, Yasuyuki Sakai, Éric Leclerc
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0231506
NMR-based metabolomic profile of hypercholesterolemic human sera: Relationship with in vitro gene expression?
Cited by: 6
Author(s): Manuela Grimaldi, Angelica Palisi, Carmen Arocha Mariño, Paola Montoro, Anna Capasso, Sara Novi, Mario Felice Tecce, Anna Maria D’Ursi
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pntd.0009172
Insights into the molecular basis of tick-borne encephalitis from multiplatform metabolomics
Cited by: 11
Author(s): Yinping Du, ZhiHui Mi, YaPing Xie, DeSheng Lu, HaiJun Zheng, Hui Sun, Meng Zhang, YiQing Niu
Software Mentions: 2
Published: over 3 years ago
10.1002/chem.202002838
Principles and Applications of Miniaturized Near‐Infrared (NIR) Spectrometers
Cited by: 143
Author(s): Krzysztof B. Beć, Justyna Grabska, Christian W. Huck
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0200336
Effects of lobeglitazone on insulin resistance and hepatic steatosis in high-fat diet-fed mice
Cited by: 8
Author(s): Bong-Hoi Choi, Zhixin Jin, Chin-ok Yi, Juhong Oh, Eun Ae Jeong, Jong Youl Lee, Kyung Ah Park, Kyung Eun Kim, Jung Eun Lee, Hyun‐Jin Kim, Jong Ryeal Hahm, Gu Seob Roh
Software Mentions: 2
Published: over 6 years ago
10.3390/plants8050115
1H-NMR Metabolite Fingerprinting Analysis Reveals a Disease Biomarker and a Field Treatment Response in Xylella fastidiosa subsp. pauca-Infected Olive Trees
Cited by: 15
Author(s): Chiara Roberta Girelli, Federica Angilè, Laura Del Coco, Danilo Migoni, Luigi Zampella, Simone Marcelletti, Nicola Cristella, Paolo Marangi, M. Scortichini, Francesco Paolo Fanizzi
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pbio.3000292
Deciphering molecular mechanism of silver by integrated omic approaches enables enhancing its antimicrobial efficacy in E. coli
Cited by: 61
Author(s): Haibo Wang, Aixin Yan, Zhigang Liu, Xinming Yang, Zeling Xu, Yuchuan Wang, Runming Wang, Mohamad Koohi‐Moghadam, Ligang Hu, Wei Xia, Huiru Tang, Yulan Wang, Hongyan Li, Hongzhe Sun
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0233350
Voltammetric analysis for distinguishing portal hypertension-related from malignancy-related ascites: A proof of concept study
Cited by: 5
Author(s): Moises Muley, Umberto Vespasiani‐Gentilucci, Antonio De Vincentis, Marco Santonico, Giorgio Pennazza, Simona Sanguedolce, Antonella De Luca, Francesco Plotti, Antonio Picardi, Raffaele Antonelli-Incalzi
Software Mentions: 2
Published: over 4 years ago
10.3390/plants8100422
Exploration of Floral Volatile Organic Compounds in Six Typical Lycoris taxa by GC-MS
Cited by: 13
Author(s): Tingting Shi, Yuanzheng Yue, Man Shi, Min Chen, Xia Yang, Lianggui Wang
Software Mentions: 2
Published: about 5 years ago
10.3390/metabo10040140
Delta-Integration of Single Gene Shapes the Whole Metabolomic Short-Term Response to Ethanol of Recombinant Saccharomyces cerevisiae Strains
Cited by: 3
Author(s): Laura Della Corte, Luca Roscini, Debora Casagrande Pierantoni, Roberto Maria Pellegrino, Carla Emiliani, Marina Basaglia, Lorenzo Favaro, Sergio Casella, Gianluigi Cardinali
Software Mentions: 2
Published: over 4 years ago
10.18632/aging.203460
Activation of the gut microbiota-kynurenine-liver axis contributes to the development of nonalcoholic hepatic steatosis in nondiabetic adults
Cited by: 8
Author(s): Guoyuan Sui, Jia Lu, Dongmei Quan, Ning Zhao, Guanlin Yang
Software Mentions: 2
Published: about 3 years ago
10.1186/s12864-019-5915-7
Integrated application of multi-omics provides insights into cold stress responses in pufferfish Takifugu fasciatus
Cited by: 46
Author(s): Xintian Wen, Yadong Hu, Xinyu Zhang, Xiaozhen Wei, Tao Wang, Shaowu Yin
Software Mentions: 2
Published: over 5 years ago
10.1111/pbi.13082
Resistance against <i>Sclerotinia sclerotiorum</i> in soybean involves a reprogramming of the phenylpropanoid pathway and up‐regulation of antifungal activity targeting ergosterol biosynthesis
Cited by: 77
Author(s): Ashish Ranjan, Nathaniel M. Westrick, Sachin Jain, Jeff S. Piotrowski, Manish Ranjan, Ryan Kessens, Logan Stiegman, C. R. Grau, Shawn P. Conley, Damon Smith, Mehdi Kabbage
Software Mentions: 2
Published: almost 6 years ago
10.1093/database/baz042
GenDiS database update with improved approach and features to recognize homologous sequences of protein domain superfamilies
Cited by: 0
Author(s): Meenakshi Iyer, K. S. Bhargava, Pavalam Murugavel, Ramanathan Sowdhamini
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0091923
Metabolomic Biomarkers in Serum and Urine in Women with Preeclampsia
Cited by: 51
Author(s): Marie Austdal, Ragnhild Bergene Skråstad, Astrid Gundersen, Rigmor Austgulen, Ann‐Charlotte Iversen, Tone Frost Bathen
Software Mentions: 2
Published: over 10 years ago
10.7717/peerj.9786
Chemotype classification and biomarker screening of male <i>Eucommia ulmoides</i> Oliv. flower core collections using UPLC-QTOF/MS-based non-targeted metabolomics
Cited by: 8
Author(s): Panfeng Liu, Lu Wang, Qingxin Du, Hongyan Du
Software Mentions: 2
Published: over 4 years ago
10.1242/bio.029991
Amyloid β42 peptide is toxic to non-neural cells in<i>Drosophila</i>yielding a characteristic metabolite profile and the effect can be suppressed by PI3K
Cited by: 5
Author(s): Mercedes Arnés, Sergio Casas‐Tintó, Anders Malmendal, Alberto Ferrús
Software Mentions: 2
Published: about 7 years ago
10.7717/peerj.1624
The metabolomic profile of gamma-irradiated human hepatoma and muscle cells reveals metabolic changes consistent with the Warburg effect
Cited by: 16
Author(s): Min Wang, Adrian Keogh, Susan Treves, Jeffrey R. Idle, Diren Beyoğlu
Software Mentions: 2
Published: almost 9 years ago
10.3390/metabo11010044
Comprehensive Meta-Analysis of COVID-19 Global Metabolomics Datasets
Cited by: 65
Author(s): Zhiqiang Pang, Guohui Zhou, Jasmine Chong, Jianguo Xia
Software Mentions: 2
Published: almost 4 years ago
10.1155/2021/8064557
GC-MS Based Metabolomics Reveals the Synergistic Mechanism of Gardeniae Fructus-Forsythiae Fructus Herb Pair in Lipopolysaccharide-Induced Acute Lung Injury Mouse Model
Cited by: 0
Author(s): Wenhui Wu, Hongyuan Lin, Ailing Yin, Cunsi Shen, Hongliang Zhou, Ma-Jie Wang, Huidong Yu, Haidan Wang, Zhihao Zhang, Wei Zhou
Software Mentions: 2
Published: over 3 years ago
10.1038/s41433-021-01503-3
AI-based structure-function correlation in age-related macular degeneration
Cited by: 6
Author(s): Leon von der Emde, Maximilian Pfau, Frank G. Holz, Monika Fleckenstein, Karsten Kortuem, Pearse A. Keane, Daniel L. Rubin, Steffen Schmitz-Valckenberg
Software Mentions: 2
Published: over 3 years ago
10.3390/metabo10040145
Metabolic Fingerprinting with Fourier-Transform Infrared (FTIR) Spectroscopy: Towards a High-Throughput Screening Assay for Antibiotic Discovery and Mechanism-of-Action Elucidation
Cited by: 14
Author(s): Bernardo Ribeiro da Cunha, Luís P. Fonseca, Cecı́lia R.C. Calado
Software Mentions: 2
Published: over 4 years ago
10.1002/btm2.10200
Screening of important metabolites and KRAS genotypes in colon cancer using secondary ion mass spectrometry
Cited by: 3
Author(s): Kookrae Cho, Eun Kyung Choi, Sung Young Lee, Jung-Hee Kim, Dae Won Moon, Jong‐Wuk Son, Eun-Joo Kim
Software Mentions: 2
Published: about 4 years ago
10.3390/foods9081090
Rapid Analysis of Milk Using Low-Cost Pocket-Size NIR Spectrometers and Multivariate Analysis
Cited by: 32
Author(s): Jordi Riu, Giulia Gorla, Dib Chakif, Ricard Boqué, Barbara Giussani
Software Mentions: 2
Published: over 4 years ago
10.1186/1471-2164-13-36
A metabolomic strategy defines the regulation of lipid content and global metabolism by Δ9 desaturases in Caenorhabditis elegans
Cited by: 28
Author(s): Cecilia Castro, Funda Sar, W. Robert Shaw, Masanori Mishima, Eric A. Miska, Julian L. Griffin
Software Mentions: 2
Published: almost 13 years ago
10.7717/peerj.6846
Manganese affects the growth and metabolism of<i>Ganoderma lucidum</i>based on LC-MS analysis
Cited by: 7
Author(s): Bo Zhang, Jie Zhou, Qiang Li, Gan BingCheng, Weihong Peng, Xiaoping Zhu, Wenfeng Tan, Lin Jiang, Xin Li
Software Mentions: 2
Published: over 5 years ago
10.1111/pbi.12777
Production of red‐flowered oilseed rape via the ectopic expression of <i><scp>O</scp>rychophragmus violaceus <scp>O</scp>v<scp>PAP</scp>2</i>
Cited by: 32
Author(s): Wenqin Fu, Daozong Chen, Qi Pan, Fengfeng Li, Zhigang Zhao, Xianhong Ge, Zaiyun Li
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0142038
Global Profiling of Carbohydrate Active Enzymes in Human Gut Microbiome
Cited by: 71
Author(s): Tanudeep Bhattacharya, Tarini Shankar Ghosh, Sharmila S. Mande
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0065880
Application of Holistic Liquid Chromatography-High Resolution Mass Spectrometry Based Urinary Metabolomics for Prostate Cancer Detection and Biomarker Discovery
Cited by: 49
Author(s): Tong Zhang, David Watson, Lijie Wang, Muhammad Abbas, Murdoch Laura, Lisa Bashford, Imran Ahmad, Nga-Yee Lam, Anthony Ng, Hing Y. Leung
Software Mentions: 2
Published: over 11 years ago
10.1038/s41598-020-78764-7
Leaf proteome modulation and cytological features of seagrass Cymodocea nodosa in response to long-term high CO2 exposure in volcanic vents
Cited by: 2
Author(s): Amalia Piro, Letizia Bernardo, Ilia Anna Serra, Isabel Barrote, Irene Olivé, Monya M. Costa, Luigi Lucini, Rui Santos, Silvia Mazzuca, João Silva
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-019-49319-2
Metabolic modulations of Pseudomonas graminis in response to H2O2 in cloud water
Cited by: 7
Author(s): Nolwenn Wirgot, Marie Lagrée, Mounir Traı̈kia, Ludovic Besaury, Pierre Amato, Isabelle Canet, Martine Sancelme, Cyril Jousse, Binta Diémé, Bernard Lyan, Anne-Marie Delort
Software Mentions: 2
Published: about 5 years ago
10.18632/oncotarget.18822
Magnetic resonance metabolic profiling of estrogen receptor-positive breast cancer: correlation with currently used molecular markers
Cited by: 8
Author(s): Ji Soo Choi, Dahye Yoon, Ja Seung Koo, Siwon Kim, Vivian Youngjean Park, Min Jung Kim, Suhkmann Kim
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-019-53287-y
Postoperative serum metabolites of patients on a low carbohydrate ketogenic diet after pancreatectomy for pancreatobiliary cancer: a nontargeted metabolomics pilot study
Cited by: 22
Author(s): Chang Moo Kang, Bo Kyeong Yun, Min-Ju Kim, Min‐Young Song, Yeon Hee Kim, Sung Hwan Lee, Hosun Lee, Song Mi Lee, Seung Min Lee
Software Mentions: 2
Published: about 5 years ago
10.18632/oncotarget.18228
Tissue and serum lipidome shows altered lipid composition with diagnostic potential in mycosis fungoides
Cited by: 8
Author(s): Chenchen Xu, Dan Zhou, Yadong Luo, Shuai Guo, Tao Wang, Jie Liu, Yuehua Liu, Zhili Li
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-18458-9
Application of variable selection in the origin discrimination of Wolfiporia cocos (F.A. Wolf) Ryvarden &amp; Gilb. based on near infrared spectroscopy
Cited by: 12
Author(s): Tian-Jun Yuan, Yanli Zhao, Ji Zhang, Yuanzhong Wang
Software Mentions: 2
Published: almost 7 years ago
10.7554/eLife.67437
Quantitative mapping of human hair greying and reversal in relation to life stress
Cited by: 24
Author(s): A Rosenberg, Shannon Rausser, Junting Ren, Eugene V. Mosharov, Gabriel Sturm, R. Todd Ogden, Purvi Patel, Rajesh Kumar Soni, Clay Lacefield, Desmond J. Tobin, Ralf Paus, Martin Picard
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms21041435
Metabolomic Analysis of Morus Cultivar Root Extracts and Their Ameliorative Effect on Testosterone-Induced Prostate Enlargement in Sprague-Dawley Rats
Cited by: 4
Author(s): Youngjin Choi, Jae-In Lee, Meiqi Fan, Yujiao Tang, Eun-Jung Yoon, Young Bae Ryu, Eun-Kyung Kim
Software Mentions: 2
Published: almost 5 years ago
10.1038/srep13624
Friend or foe: differential responses of rice to invasion by mutualistic or pathogenic fungi revealed by RNAseq and metabolite profiling
Cited by: 32
Author(s): Xihui Xu, Chen Wang, Shuxian Li, Zhen-Zhu Su, Huina Zhou, Lijuan Mao, Xiaoxiao Feng, Pingping Li, Xia Chen, John Snyder, Christian P. Kubicek, Chulong Zhang, Fu‐Cheng Lin
Software Mentions: 2
Published: about 9 years ago
10.1038/srep10375
A comparative analysis of high-throughput platforms for validation of a circulating microRNA signature in diabetic retinopathy
Cited by: 58
Author(s): Ryan J. Farr, Andrzej S. Januszewski, Mugdha V. Joglekar, Helena Liang, Annie K. McAulley, Alex W. Hewitt, Helen E. Thomas, Thomas Loudovaris, Thomas W. H. Kay, Alicia J. Jenkins, Anandwardhan A. Hardikar
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-017-18674-3
Systematic analysis of the regulatory roles of microRNAs in postnatal maturation and metergasis of liver of breeder cocks
Cited by: 0
Author(s): Shengru Wu, Wei Guo, Saisai Liang, Hong Lü, Wenqiang Sun, Xiaochun Ren, Qingzhu Sun, Xiaojun Yang
Software Mentions: 2
Published: almost 7 years ago
10.18632/oncotarget.11754
A characteristic biosignature for discrimination of gastric cancer from healthy population by high throughput GC-MS analysis
Cited by: 42
Author(s): Yinan Chen, Jun Zhang, Li Guo, Lei Liu, Jingran Wen, Lu Xu, Min Yan, Zuofeng Li, Xiaoyan Zhang, Nan Peng, Jinling Jiang, Jun Ji, Jianian Zhang, Wei Cai, Huisheng Zhuang, Yan Wang, Zhenggang Zhu, Yingyan Yu
Software Mentions: 2
Published: about 8 years ago
10.3390/ijms21124568
Validation of Breast Cancer Margins by Tissue Spray Mass Spectrometry
Cited by: 7
Author(s): Vitaliy Chagovets, Natalia Starodubtseva, Alisa Tokareva, Vladimir Frankevich, В В Родионов, Kometova V.V. Kometova, Konstantin Chingin, Eugene Kukaev, Huanwen Chen, Г. Т. Сухих
Software Mentions: 2
Published: over 4 years ago
10.3390/ijms17111789
Tomato Juice Consumption Modifies the Urinary Peptide Profile in Sprague-Dawley Rats with Induced Hepatic Steatosis
Cited by: 9
Author(s): Gala Martín‐Pozuelo, Rocío González-Barrio, Gonzalo G. Barberá, Amaya Albalat, Javier García‐Alonso, William Mullen, Harald Mischak, María Jesús Periago
Software Mentions: 2
Published: about 8 years ago
10.18632/oncotarget.13178
Non-invasive diagnosis of papillary thyroid microcarcinoma: a NMR-based metabolomics approach
Cited by: 32
Author(s): Jinghui Liang, Sanyuan Hu, Paolo Miccoli, Qingdong Zeng, Shaozhuang Liu, Rongcheng Lin, Chunxiao Hu
Software Mentions: 2
Published: about 8 years ago
10.3390/ijms160921959
Metabolite Profiling of Diverse Rice Germplasm and Identification of Conserved Metabolic Markers of Rice Roots in Response to Long-Term Mild Salinity Stress
Cited by: 63
Author(s): Myung Hee Nam, Eunjung Bang, Taek Yun Kwon, Yuran Kim, Eun Hee Kim, Kyungwon Cho, Woong June Park, Beom-Gi Kim, In Sun Yoon
Software Mentions: 2
Published: about 9 years ago
10.1155/2021/7093844
Untargeted Metabolomic Profiling of Cuprizone-Induced Demyelination in Mouse Corpus Callosum by UPLC-Orbitrap/MS Reveals Potential Metabolic Biomarkers of CNS Demyelination Disorders
Cited by: 5
Author(s): Z. Zhao, Tongqi Li, Xiaohua Dong, Xiaojing Wang, Zhongxiao Zhang, Changyi Zhao, Xueran Kang, Ruizhe Zheng, Xinyuan Li
Software Mentions: 2
Published: about 3 years ago
10.1186/s12937-019-0446-2
The 1H NMR serum metabolomics response to a two meal challenge: a cross-over dietary intervention study in healthy human volunteers
Cited by: 10
Author(s): Millie Rådjursöga, Helen M. Lindqvist, Anders Pedersen, Bengt Karlsson, Daniel Malmodin, Carl Brunius, Lars Ellegård, Anna Winkvist
Software Mentions: 2
Published: over 5 years ago
10.1038/srep35037
Comprehensive Plasma Metabolomic Analyses of Atherosclerotic Progression Reveal Alterations in Glycerophospholipid and Sphingolipid Metabolism in Apolipoprotein E-deficient Mice
Cited by: 50
Author(s): Vi Dang, Aric Huang, Lexy H Zhong, Yuanyuan Shi, Geoff H. Werstuck
Software Mentions: 2
Published: about 8 years ago
10.7554/eLife.37082
The plant pathogen Pseudomonas aeruginosa triggers a DELLA-dependent seed germination arrest in Arabidopsis
Cited by: 37
Author(s): Hicham Chahtane, Thanise Nogueira Füller, Pierre‐Marie Allard, Laurence Marcourt, Emerson Ferreira Queiroz, Venkatasalam Shanmugabalaji, Jacques Falquet, Jean‐Luc Wolfender, Luis Lopez‐Molina
Software Mentions: 2
Published: about 6 years ago
10.1038/s41598-018-22031-3
ATLANTIS - Attractor Landscape Analysis Toolbox for Cell Fate Discovery and Reprogramming
Cited by: 12
Author(s): Osama Shiraz Shah, Muhammad Faizyab Ali Chaudhary, Hira Anees Awan, Fizza Fatima, Zainab Arshad, Amina Bibi, Maria Ahmed, Hadia Hameed, Muhammad Furqan, Shareef Khalid, Amir Faisal, Safee Ullah Chaudhary
Software Mentions: 2
Published: over 6 years ago
10.7554/eLife.13442
Microbiota-driven transcriptional changes in prefrontal cortex override genetic differences in social behavior
Cited by: 213
Author(s): Mar Gacias, Sevasti Gaspari, Patricia-Mae G Santos, Sabrina Tamburini, Mônica de Andrade, Fan Zhang, Nan Shen, Vladimir Tolstikov, Michael A. Kiebish, Jeffrey L. Dupree, Venetia Zachariou, José C. Clemente, Patrizia Casaccia
Software Mentions: 2
Published: over 8 years ago
10.3390/ijms22189776
Is It Possible to Create Antimicrobial Peptides Based on the Amyloidogenic Sequence of Ribosomal S1 Protein of P. aeruginosa?
Cited by: 9
Author(s): Sergei Y. Grishin, Pavel A. Domnin, С. В. Кравченко, В. Н. Азев, Leila G. Mustaeva, E. Yu. Gorbunova, M. I. Kobyakova, Alexey K. Surin, М. В. Макарова, Stanislav R. Kurpe, Р. С. Фадеев, Alexey S. Vasilchenko, В. В. Фирстова, Ermolaeva Sа, Oxana V. Galzitskaya
Software Mentions: 2
Published: about 3 years ago
10.3390/nu10091151
Worldwide Variation in Human Milk Metabolome: Indicators of Breast Physiology and Maternal Lifestyle?
Cited by: 61
Author(s): Melvin Gay, Petya Koleva, Carolyn M. Slupsky, Elloise du Toit, Merete Eggesbø, Christine Cole Johnson, Ganesa Wegienka, Naoki Shimojo, Dianne Campbell, Susan L. Prescott, Daniel Munblit, Donna Geddes, Anita L. Kozyrskyj
Software Mentions: 2
Published: about 6 years ago
10.1038/srep36490
Concurrent profiling of polar metabolites and lipids in human plasma using HILIC-FTMS
Cited by: 27
Author(s): Xiaoming Cai, Ruibin Li
Software Mentions: 2
Published: about 8 years ago
10.1038/s41598-019-51117-9
Untargeted metabolomic analysis of the carotenoid-based orange coloration in Haliotis gigantea using GC-TOF-MS
Cited by: 9
Author(s): Wei Xiao-Hui, Nan Chen, Bin Tang, Xuan Luo, You Wang, Caihuan Ke
Software Mentions: 2
Published: about 5 years ago
10.3390/ijms21228452
A Lipidomic Signature Complements Stemness Features Acquisition in Liver Cancer Cells
Cited by: 9
Author(s): Irma Magaly Rivas Serna, Ilaria Romito, Andrea Maugeri, Oriana Lo Re, Sebastiano Giallongo, Gianluigi Mazzoccoli, Jude A. Oben, Giovanni Li Volti, Tommaso Mazza, Anna Alisi, Manlio Vinciguerra
Software Mentions: 2
Published: about 4 years ago
10.18632/oncotarget.22402
NMR-based metabolomic techniques identify potential urinary biomarkers for early colorectal cancer detection
Cited by: 41
Author(s): Zhening Wang, Yan Lin, Jiahao Liang, Yao Huang, Changchun Ma, Xingmu Liu, Ju-Rong Yang
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-018-31243-6
Sexual difference of small RNA expression in Tetralogy of Fallot
Cited by: 10
Author(s): Bo Wang, Guoyong Shi, Zhongqun Zhu, Huiwen Chen, Qin Fu
Software Mentions: 2
Published: about 6 years ago
10.1038/s41598-018-37657-6
Chronic sleep restriction in the rotenone Parkinson’s disease model in rats reveals peripheral early-phase biomarkers
Cited by: 17
Author(s): Juliane Fagotti, Adriano Targa, Laís S. Rodrigues, Ana Carolina D. Noseda, Flávia W.C. Dorieux, Franciele Franco Scarante, Jessica L. Ilkiw, Fernando Mazzilli Louzada, Namrata Chowdhury, Daan R. van der Veen, Benita Middleton, Jeroen L. A. Pennings, Jonathan R. Swann, Debra J. Skene, Marcelo M.S. Lima
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12984-017-0297-z
Gait characteristics and their discriminative power in geriatric patients with and without cognitive impairment
Cited by: 20
Author(s): Lisette H. J. Kikkert, Nicolas Vuillerme, Jos P. van Campen, Bregje A. Appels, Tibor Hortobágyi, Claudine J. C. Lamoth
Software Mentions: 2
Published: over 7 years ago
10.1038/srep23334
Metabolic phenotyping for monitoring ovarian cancer patients
Cited by: 41
Author(s): Chaofu Ke, Ang Li, Yan Hou, Meng Sun, Kai Yang, Jinlong Cheng, Jingtao Wang, Tingting Ge, Fan Zhang, Qiang Li, Junnan Li, Ying Wu, Ge Lou, Kang Li
Software Mentions: 2
Published: over 8 years ago
10.18632/oncotarget.27787
Histo-molecular differentiation of renal cancer subtypes by mass spectrometry imaging and rapid proteome profiling of formalin-fixed paraffin-embedded tumor tissue sections
Cited by: 9
Author(s): Uwe Möginger, Niels Marcussen, Ole N. Jensen
Software Mentions: 2
Published: about 4 years ago
10.1038/srep11298
In situ characterizing membrane lipid phenotype of breast cancer cells using mass spectrometry profiling
Cited by: 52
Author(s): Manwen He, Shuai Guo, Zhili Li
Software Mentions: 2
Published: over 9 years ago