cran: DA | Projects | Ecosyste.ms: Papers

10.3390/nu11020274

Metabolomic Salivary Signature of Pediatric Obesity Related Liver Disease and Metabolic Syndrome
Cited by: 35
Author(s): Jacopo Troisi, F. Belmonte, A. Bisogno, Luca Pierri, Angelo Colucci, Giovanni Scala, Pierpaolo Cavallo, Claudia Mandato, Antonella Di Nuzzi, Laura Di Michele, Anna Pia Delli Bovi, Salvatore Guercio Nuzio, Pietro Vajro
Software Mentions: 3
Published: almost 7 years ago

10.3390/ijms22168751

Integrated Metabolomic and Transcriptomic Analysis Reveals the Flavonoid Regulatory Network by Eutrema EsMYB90
Cited by: 8
Author(s): Yuting Qi, Chuanshun Li, Chonghao Duan, Caihong Gu, Quan Zhang
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0159548

Metabolic Profiles of Obesity in American Indians: The Strong Heart Family Study
Cited by: 14
Author(s): Qi Zhao, Yun Zhu, Lyle G. Best, Jason G. Umans, Karan Uppal, Vi Linh Tran, Dean P. Jones, Elisa T. Lee, Barbara V. Howard, Jinying Zhao
Software Mentions: 3
Published: over 9 years ago

10.1186/2049-3002-2-18

Metabolic reprogramming induced by ketone bodies diminishes pancreatic cancer cachexia
Cited by: 179
Author(s): Surendra K. Shukla, Teklab Gebregiworgis, Vinee Purohit, Nina V. Chaika, Venugopal Gunda, Prakash Radhakrishnan, Kamiya Mehla, Iraklis I. Pipinos, Robert Powers, Fang Yu, Pankaj K. Singh
Software Mentions: 3
Published: over 11 years ago

10.3390/ijms20020401

Rootstock-Mediated Effects on Cabernet Sauvignon Performance: Vine Growth, Berry Ripening, Flavonoids, and Aromatic Profiles
Cited by: 27
Author(s): Yu Wang, Wei-Kai Chen, Xiaotong Gao, Lei He, Xiaohui Yang, Fei He, Chang‐Qing Duan, Jun Wang
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0036297

Medium Chain Fatty Acids Are Selective Peroxisome Proliferator Activated Receptor (PPAR) γ Activators and Pan-PPAR Partial Agonists
Cited by: 163
Author(s): M.V. Liberato, Alessandro S. Nascimento, Steven D. Ayers, Jean Z. Lin, Aleksandra Čvoro, Rodrigo L. Silveira, Leandro Martı́nez, Paulo C. T. Souza, Daniel Menezes Saidemberg, Tuo Deng, Angela Angelica Amato, Marie Togashi, Willa A. Hsueh, Kevin J. Phillips, Mário Sérgio Palma, Francisco de Assis Rocha Neves, Munir S. Skaf, Paul Webb, Igor Polikarpov
Software Mentions: 3
Published: over 13 years ago

10.1107/S1399004715005210

In meso in situ serial X-ray crystallography of soluble and membrane proteins
Cited by: 98
Author(s): Chia‐Ying Huang, V. Oliéric, Pikyee Ma, Ezequiel Panepucci, Kay Diederichs, Meitian Wang, Martin Caffrey
Software Mentions: 3
Published: over 10 years ago

10.1099/jmm.0.028126-0

Microbial community and metabolomic comparison of irritable bowel syndrome faeces
Cited by: 190
Author(s): Kannan Ponnusamy, Jung Ran Choi, Jiyoung Kim, Sun-Young Lee, Choong Hwan Lee
Software Mentions: 3
Published: over 14 years ago

10.3390/ijms21041546

The Hypoxic Proteome and Metabolome of Barley (Hordeum vulgare L.) with and without Phytoglobin Priming
Cited by: 12
Author(s): Olga Andrzejczak, Jesper Foged Havelund, Weiqing Wang, Sergey I. Kovalchuk, Christina E Hagensen, Harald Hasler-Sheetal, Ole N. Jensen, Adelina Rogowska-Wrzesińska, Ian Max Møller, Kim H. Hebelstrup
Software Mentions: 3
Published: almost 6 years ago

10.1002/ijc.31536

Pre‐diagnostic blood immune markers, incidence and progression of B‐cell lymphoma and multiple myeloma: Univariate and functionally informed multivariate analyses
Cited by: 13
Author(s): Roel Vermeulen, Fatemeh Saberi Hosnijeh, Barbara Bodinier, Lützen Portengen, Benoît Liquet, Javiera Garrido-Manriquez, Henk M. Lokhorst, Ingvar A. Bergdahl, Soterios A. Kyrtopoulos, Ann Sofie Johansson, Panagiotis Georgiadis, Beatrice Melin, Domenico Palli, Vittorio Krogh, Salvatore Panico, Carlotta Sacerdote, Rosario Tumino, Paolo Víneis, Raphaële Castagné, Marc Chadeau‐Hyam, Maria Botsivali, Aristotelis Chatziioannou, Ioannis Valavanis, Jos Kleinjans, Theo M. C. M. de Kok, Hector C. Keun, Toby J. Athersuch, Rachel S. Kelly, Per Lenner, Göran Hallmans, Euripides G. Stephanou, Antonis Myridakis, Manolis Kogevinas, Lucia Fazzo, Marco De Santis, Pietro Comba, Benedetta Bendinelli, Hannu Kiviranta, Panu Rantakokko, Riikka Airaksinen, Päivi Ruokojärvi, Mark S. Gilthorpe, Sarah Fleming, Thomas Fleming, Yu Kang Tu, Thomas Lundh, Kuo Liong Chien, Wei-Jen Chen, Wen‐Chung Lee, Chuhsing Kate Hsiao, Po-Chen Kuo, Hung Hung, Shu-Fen Liao
Software Mentions: 3
Published: over 7 years ago

10.3390/plants9050592

From Genome to Field—Observation of the Multimodal Nematicidal and Plant Growth-Promoting Effects of Bacillus firmus I-1582 on Tomatoes Using Hyperspectral Remote Sensing
Cited by: 16
Author(s): Nik Susič, Uroš Žibrat, Lovro Sinkovič, Andrej Vončina, Jaka Razinger, M. Knapič, Aleš Sedlar, Saša Širca, Barbara Gerič Stare
Software Mentions: 3
Published: over 5 years ago

10.3390/s16071013

An Improved Simulated Annealing Technique for Enhanced Mobility in Smart Cities
Cited by: 17
Author(s): Hayder M. Amer, Naveed Salman, Matthew Hawes, Moumena Chaqfeh, Lyudmila Mihaylova, Martin Mayfield
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-021-90737-y

Rapid evolution of mammalian APLP1 as a synaptic adhesion molecule
Cited by: 6
Author(s): Wataru Onodera, Toru Asahi, Naoya Sawamura
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-021-90931-y

1H NMR based metabolic profiling distinguishes the differential impact of capture techniques on wild bighorn sheep
Cited by: 3
Author(s): Galen O’Shea-Stone, Rachelle Lambert, Brian Tripet, J. G. Berardinelli, Jennifer M. Thomson, Valérie Copié, Robert A. Garrott
Software Mentions: 3
Published: over 4 years ago

10.1186/s12864-020-6522-3

Tuberomics: a molecular profiling for the adaption of edible fungi (Tuber magnatum Pico) to different natural environments
Cited by: 13
Author(s): Federico Vita, Beatrice Giuntoli, Edoardo Bertolini, Cosimo Taiti, Elettra Marone, Chiara D’Ambrosio, Emanuela Trovato, Danilo Sciarrone, Mariosimone Zoccali, Raffaella Balestrini, Andrea Scaloni, Luigi Mondello, Stefano Mancuso, Massimo Alessio, Amedeo Alpi
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0198156

Time course metabolome of Roux-en-Y gastric bypass confirms correlation between leptin, body weight and the microbiome
Cited by: 14
Author(s): Loqmane Seridi, Gregory C. Leo, G. Lynis Dohm, Walter J. Pories, James M. Lenhard
Software Mentions: 3
Published: over 7 years ago

10.7717/peerj-cs.370

An integrated cuckoo search optimizer for single and multi-objective optimization problems
Cited by: 3
Author(s): Xiangbo Qi, Zhaohui Yuan, Yan Song
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-021-84901-7

Association of maternal gut microbiota and plasma metabolism with congenital heart disease in offspring: a multi-omic analysis
Cited by: 7
Author(s): Tingting Wang, Lizhang Chen, Peng Huang, Tubao Yang, Senmao Zhang, Lijuan Zhao, Letao Chen, Zi‐Wei Ye, Liu Luo, Jiabi Qin
Software Mentions: 3
Published: almost 5 years ago

10.1186/s12014-018-9221-1

High accuracy differentiating autoimmune pancreatitis from pancreatic ductal adenocarcinoma by immunoglobulin G glycosylation
Cited by: 23
Author(s): Hsi-Chang Shih, Ming‐Chu Chang, Chein‐Hung Chen, I‐Lin Tsai, San-Yuan Wang, Ya-Po Kuo, Chung-Hsuan Chen, Yu-Ting Chang
Software Mentions: 3
Published: about 7 years ago

10.3390/s121216291

Multivariate and Multiscale Data Assimilation in Terrestrial Systems: A Review
Cited by: 78
Author(s): Carsten Montzka, Valentijn R. N. Pauwels, Harrie‐Jan Hendricks Franssen, Xujun Han, Harry Vereecken
Software Mentions: 3
Published: about 13 years ago

10.1042/BSR20202915

Lipid profiling of mouse intestinal organoids for studying APC mutations
Cited by: 3
Author(s): Zoë H. Jukes, Anne Freier, Maria Glymenaki, Richard C. D. Brown, Lee Parry, Elizabeth J. Want, Panagiotis A. Vorkas, Jia V. Li
Software Mentions: 3
Published: almost 5 years ago

10.1186/s12931-020-01364-6

Increased mortality of acute respiratory distress syndrome was associated with high levels of plasma phenylalanine
Cited by: 17
Author(s): Jing Xu, Tingting Pan, Xiaoling Qi, Ruoming Tan, Xiaoli Wang, Zhaojun Liu, Zheying Tao, Yi Zhang, Hong Chen, Yihui Wang, Jingjing Zhang, Jie Wang, Jialin Liu
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-020-72145-w

Inhibition of enteric methanogenesis in dairy cows induces changes in plasma metabolome highlighting metabolic shifts and potential markers of emission
Cited by: 17
Author(s): Bénédict Yanibada, Ulli Martin Hohenester, Mélanie Petera, Cécile Canlet, Stéphanie Durand, Fabien Jourdan, Julien Bernard, Cécile Martin, Maguy Eugène, Diego P. Morgavi, Hamid Boudra
Software Mentions: 3
Published: over 5 years ago

10.1111/jcmm.15837

Diagnostic potential of circulating cell‐free microRNAs for community‐acquired pneumonia and pneumonia‐related sepsis
Cited by: 19
Author(s): Stefanie Hermann, Florian Brandes, Benedikt Kirchner, Dominik Buschmann, Melanie Borrmann, Matthias Klein, Stefan Kotschote, Michael Bonin, Marlene Reithmair, Inès Kaufmann, Gustav Schelling, Michael W. Pfaffl
Software Mentions: 3
Published: over 5 years ago

10.1002/1878-0261.12642

Deciphering tissue‐based proteome signatures revealed novel subtyping and prognostic markers for thymic epithelial tumors
Cited by: 7
Author(s): Xin Ku, Qiangling Sun, Lei Zhu, Zhenyu Gu, Yuchen Han, Ning Xu, Chen Meng, Xiaohua Yang, Wei Yan, Wentao Fang
Software Mentions: 3
Published: almost 6 years ago

10.1093/jxb/eraa518

Differential expression of SlKLUH controlling fruit and seed weight is associated with changes in lipid metabolism and photosynthesis-related genes
Cited by: 17
Author(s): Qiang Li, Manohar Chakrabarti, Nathan K Taitano, Yuji Okazaki, Kazuki Saito, Ayed Al‐Abdallat, Esther van der Knaap
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-020-73747-0

A role for the immune system in advanced laryngeal cancer
Cited by: 9
Author(s): Marta Tagliabue, Fausto Maffini, Caterina Fumagalli, Sara Gandini, Daniela Lepanto, Federica Corso, Salvatore Cacciola, Alberto Ranghiero, Alessandra Rappa, Davide Vacirca, Maria Cossu Rocca, Daniela Alterio, Elena Guerini-Rocco, Augusto Cattaneo, Francesco Chu, Stefano Zorzi, Giuseppe Curigliano, Susanna Chiocca, Massimo Barberis, Giuseppe Viale, Mohssen Ansarin
Software Mentions: 3
Published: about 5 years ago

10.1186/s12876-020-01281-4

Fecal microbiota composition is linked to the postoperative disease course in patients with Crohn’s disease
Cited by: 11
Author(s): Anna Strömbeck, Anders Lasson, Hans Strid, Johanna Sundin, Per-Ove Stotzer, Magnus Simrén, Maria K. Magnusson, Lena Öhman
Software Mentions: 3
Published: over 5 years ago

10.1186/s12862-014-0166-3

Species-specific ant brain manipulation by a specialized fungal parasite
Cited by: 96
Author(s): Charissa de Bekker, Lauren E. Quevillon, Philip B. Smith, Kimberly R. Fleming, Debashis Ghosh, Andrew D. Patterson, David Hughes
Software Mentions: 3
Published: over 11 years ago

10.1186/s40168-019-0738-y

Batch effect exerts a bigger influence on the rat urinary metabolome and gut microbiota than uraemia: a cautionary tale
Cited by: 16
Author(s): David Randall, Julius Kieswich, Jonathan R. Swann, Kieran McCafferty, Christoph Thiemermann, Michael A. Curtis, Lesley Hoyles, M. Yaqoob
Software Mentions: 3
Published: over 6 years ago

10.1002/jbm4.10478

Metabolic Alterations in Older Women With Low Bone Mineral Density Supplemented With Lactobacillus reuteri
Cited by: 14
Author(s): Peishun Li, Daniel Sundh, Boyang Ji, Dimitra Lappa, Lingqun Ye, Jens Nielsen, Mattias Lorentzon
Software Mentions: 3
Published: almost 5 years ago

10.1186/s40168-021-01085-y

Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics
Cited by: 14
Author(s): Patrick T. West, Samantha L. Peters, Matthew R. Olm, Feiqiao Brian Yu, Haley Gause, Yue Clare Lou, Brian Firek, Robyn Baker, Alexander D. Johnson, Michael J. Morowitz, Robert L. Hettich, Jillian F. Banfield
Software Mentions: 3
Published: over 4 years ago

10.1186/s40168-020-00976-w

High-dose saccharin supplementation does not induce gut microbiota changes or glucose intolerance in healthy humans and mice
Cited by: 32
Author(s): Joan Serrano, Kathleen R. Smith, Audra L. Crouch, Vandana Sharma, Fanchao Yi, Veronika Vargova, Traci E. LaMoia, Lydia M. Dupont, Vanida A. Serna, Fang Tang, Laisa Gomes-Dias, Joshua J. Blakeslee, Emmanuel Hatzakis, Scott N. Peterson, Matthew Anderson, Richard E. Pratley, George A. Kyriazis
Software Mentions: 3
Published: almost 5 years ago

10.1002/hbm.24803

Accurate and robust segmentation of neuroanatomy in T1‐weighted MRI by combining spatial priors with deep convolutional neural networks
Cited by: 20
Author(s): Philip Novosad, Vladimir Fonov, D. Louis Collins, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-020-77105-y

Deep phenotyping of myalgic encephalomyelitis/chronic fatigue syndrome in Japanese population
Cited by: 16
Author(s): Toshimori Kitami, Sanae Fukuda, Tamotsu Kato, Kouzi Yamaguti, Yasuhito Nakatomi, Emi Yamano, Yosky Kataoka, Kei Mizuno, Yuuri Tsuboi, Yasushi Kogo, Harukazu Suzuki, Masayoshi Itoh, M. Morioka, Hideya Kawaji, Haruhiko Koseki, Jun Kikuchi, Yoshihide Hayashizaki, Hiroshi Ohno, Hirohiko Kuratsune, Yasuyoshi Watanabe
Software Mentions: 3
Published: about 5 years ago

10.1093/gigascience/giy073

Arabidopsis phenotyping through geometric morphometrics
Cited by: 19
Author(s): Carlos Augusto Manacorda, Sebastián Asurmendi
Software Mentions: 3
Published: over 7 years ago

10.1007/s11306-020-01717-8

MetaboShiny: interactive analysis and metabolite annotation of mass spectrometry-based metabolomics data
Cited by: 14
Author(s): Joanna C. Wolthuis, Stefanía Magnúsdóttir, Mia L. Pras‐Raves, Maryam Moshiri, Judith Jans, Boudewijn M.T. Burgering, Saskia W.C. van Mil, Jeroen de Ridder
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2021.697889

Identification of a New Giant Emrbryo Allele, and Integrated Transcriptomics and Metabolomics Analysis of Giant Embryo Development in Rice
Cited by: 7
Author(s): Zejun Hu, Qiangqiang Xiong, Kai Wang, Lixia Zhang, Ying Yan, Liming Cao, Fuan Niu, Zhu Jun, Jinlong Hu, Shujun Wu
Software Mentions: 3
Published: over 4 years ago

10.3389/fpls.2019.00339

Flooding Responses on Grapevine: A Physiological, Transcriptional, and Metabolic Perspective
Cited by: 36
Author(s): Benedetto Ruperti, Alessandro Botton, Francesca Populin, Giulia Eccher, Matteo Brilli, Silvia Quaggiotti, Sara Trevisan, Nadia Cainelli, Paola Guarracino, Elisabetta Schievano, Franco Meggio
Software Mentions: 3
Published: almost 7 years ago

10.3390/metabo8030050

Potential Metabolomic Linkage in Blood between Parkinson’s Disease and Traumatic Brain Injury
Cited by: 14
Author(s): Massimo S. Fiandaca, Thomas Groß, Thomas M. Johnson, Michele T.M. Hu, Samuel Evetts, Richard Wade‐Martins, Kian Merchant‐Borna, Jeffrey J. Bazarian, Amrita K. Cheema, Mark Mapstone, Howard J. Federoff
Software Mentions: 3
Published: over 7 years ago

10.1186/s13568-021-01246-0

Identification of the molecular mechanisms underlying brisket disease in Holstein heifers via microbiota and metabolome analyses
Cited by: 1
Author(s): Kun Yao, Shuxiang Wang, Gaowa Naren, Shuai Huang, Shengli Li, Weijuan Shao
Software Mentions: 3
Published: over 4 years ago

10.3390/metabo9120308

From Samples to Insights into Metabolism: Uncovering Biologically Relevant Information in LC-HRMS Metabolomics Data
Cited by: 58
Author(s): Julijana Ivanišević, Elizabeth J. Want
Software Mentions: 3
Published: about 6 years ago

10.3390/metabo11090627

Comparative Untargeted Metabolomic Profiling of Induced Mitochondrial Fusion in Pancreatic Cancer
Cited by: 0
Author(s): Nathalie Nguyen, Meifang Yu, Vinit Y. Reddy, Ariana Carolina Acevedo-Diaz, Enzo C. Mesarick, Joseph Abi Jaoude, Min Yuan, John M. Asara, Cullen M. Taniguchi
Software Mentions: 3
Published: over 4 years ago

10.3390/metabo10010028

A Case Report of Switching from Specific Vendor-Based to R-Based Pipelines for Untargeted LC-MS Metabolomics
Cited by: 14
Author(s): Álvaro Fernández-Ochoa, Rosa Quirantes-Piné, Isabel Borrás-Linares, María de la Luz Cádiz-Gurrea, Marta E. Alarcón‐Riquelme, Carl Brunius, Antonio Segura‐Carretero
Software Mentions: 3
Published: almost 6 years ago

10.3389/fchem.2021.662659

The Effects of Sampling and Storage Conditions on the Metabolite Profile of the Marine Sponge Geodia barretti
Cited by: 4
Author(s): Ida Erngren, E.F. Smit, Curt Pettersson, Paco Cárdenas, Mikael Hedeland
Software Mentions: 3
Published: over 4 years ago

10.1002/fsn3.1841

A comparative UPLC‐Q‐Orbitrap‐MS untargeted metabolomics investigation of different parts of Clausena lansium (Lour.) Skeels
Cited by: 15
Author(s): Ruiyi Fan, Cheng Peng, Xinxin Zhang, Diyang Qiu, Genlin Mao, Yusheng Lu, Jiwu Zeng
Software Mentions: 3
Published: over 5 years ago

10.3390/foods8120641

Temporal Check-All-That-Apply (TCATA) Reveals Matrix Interaction Effects on Flavor Perception in a Model Wine Matrix
Cited by: 10
Author(s): Andrew R. Poveromo, Helene Hopfer
Software Mentions: 3
Published: about 6 years ago

10.1093/bioinformatics/btz067

DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis
Cited by: 27
Author(s): Yang Yang, Timothy M. Walker, A Sarah Walker, Daniel J. Wilson, Timothy E. A. Peto, Derrick W. Crook, Farah E. Shamout, Irena Arandjelović, Iñaki Comas, Maha Farhat, Qian Gao, Vitali Sintchenko, Dick van Soolingen, Sarah Hoosdally, Ana Lúıza Gibertoni Cruz, Joshua A. Carter, Clara Grazian, Sarah G Earle, Samaneh Kouchaki, Yang Yang, Timothy M. Walker, Philip Fowler, David A. Clifton, Zamin Iqbal, Martin Hunt, E. Grace Smith, Priti Rathod, Lisa Jarrett, Daniela Matias, Daniela María Cirillo, Emanuele Borroni, Simone Battaglia, Arash Ghodousi, Andrea Spitaleri, Andrea Maurizio Cabibbe, Sabira Tahseen, Kayzad Nilgiriwala, Sanchi Shah, Camilla Rodrigues, Priti Kambli, Utkarsha Surve, R. S. Khot, Stefan Niemann, Thomas Köhl, Matthias Merker, Harald Hoffmann, Nikolay Molodtsov, Sara Plesnik, Nazir Ismail, Guy Thwaites, Thuong Nguyen Thuy Thuong, Nhung Hoang Ngoc, Vijay Srinivasan, D. J. Moore, David Jorge Coronel, Walter Solano, George F. Gao, Guangxue He, Yanlin Zhao, Aijing Ma, Chunfa Liu, Baoli Zhu, Ian F. Laurenson, Pauline Claxton, Anastasia Koch, Robert J. Wilkinson, Ajit Lalvani, James E. Posey, James Jennifer Gardy, Jim Werngren, Nicholas I. Paton, Ruwen Jou, Mei-Hua Wu, Wan-Hsuan Lin, Lucilaine Ferrazoli, Rosângela Siqueira de Oliveira, São Paulo, Tingting Zhu, David A. Clifton
Software Mentions: 3
Published: almost 7 years ago

10.3390/metabo10050205

Sedentariness and Urinary Metabolite Profile in Type 2 Diabetic Patients, a Cross-Sectional Study
Cited by: 7
Author(s): Elisa Benetti, Erica Liberto, Davide Bressanello, Valentina Bordano, Arianna Carolina Rosa, Gianluca Miglio, Jonida Haxhi, Giuseppe Pugliese, Stefano Balducci, Chiara Emilia Irma Cordero
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0231976

New insights in the allelopathic traits of different barley genotypes: Middle Eastern and Tibetan wild-relative accessions vs. cultivated modern barley
Cited by: 16
Author(s): Mauro Maver, Begoña Miras-Moreno, Luigi Lucini, Marco Trevisan, Youry Pii, Stefano Cesco, Tanja Mimmo
Software Mentions: 3
Published: over 5 years ago

10.3389/fcell.2021.648209

Melatonin Modulates Lipid Metabolism in Porcine Cumulus–Oocyte Complex via Its Receptors
Cited by: 4
Author(s): Tianqi Zhu, Shengyu Guan, Dongying Lv, Mengmeng Zhao, Laiqing Yan, Li Shi, Pengyun Ji, Lu Zhang, Guoshi Liu
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-021-82201-8

A metabolomic approach to target antimalarial metabolites in the Artemisia annua fungal endophytes
Cited by: 24
Author(s): Hani A. Alhadrami, Ahmed M. Sayed, Ahmed O. El-Gendy, Yara I. Shamikh, Yasser Gaber, Walid Bakeer, Noheir H. Sheirf, Eman Zekry Attia, Gehan M. Shaban, Basma Ali Khalifa, Che Julius Ngwa, Gabriele Pradel, Mostafa E. Rateb, Hossam M. Hassan, Dalal Hussien M. Alkhalifah, Usama Ramadan Abdelmohsen, Wael N. Hozzein
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-018-31264-1

Differentiation and comparison of Wolfiporia cocos raw materials based on multi-spectral information fusion and chemometric methods
Cited by: 19
Author(s): Yan Li, Yuanzhong Wang
Software Mentions: 3
Published: over 7 years ago

10.3389/fonc.2020.01494

Mutant Proteomics of Lung Adenocarcinomas Harboring Different EGFR Mutations
Cited by: 6
Author(s): Toshihide Nishimura, Ákos Végvári, Hiroki Nakamura, Harubumi Kato, Hisashi Saji
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-57257-2

Postprandial Metabolism is Impaired in Overweight Normoglycemic Young Adults without Family History of Diabetes
Cited by: 20
Author(s): Ashok Kumar, Gopika Satheesh, G. Vijayakumar, Mahesh Chandran, Priya R. Prabhu, Leena Simon, V. Raman Kutty, Kartha Cc, Abdul Jaleel
Software Mentions: 3
Published: almost 6 years ago

10.3389/fimmu.2020.569727

Alterations of Gut Microbiome and Metabolite Profiling in Mice Infected by Schistosoma japonicum
Cited by: 27
Author(s): Yue Hu, Jiansong Chen, Yongping Xu, Hongli Zhou, Ping Huang, Yu-Bin Ma, Minzhao Gao, Shaoyun Cheng, Haiyun Zhou, Ziquan Lv
Software Mentions: 3
Published: about 5 years ago

10.3389/fmolb.2015.00004

A data preprocessing strategy for metabolomics to reduce the mask effect in data analysis
Cited by: 70
Author(s): Jun Yang, Xinjie Zhao, Xin Lü, Xiaohui Lin, Guowang Xu
Software Mentions: 3
Published: almost 11 years ago

10.1038/s41598-019-51489-y

NMR-based metabolic profiling and comparison of Japanese persimmon cultivars
Cited by: 9
Author(s): Shinsei Ryu, Tsuyoshi Muramatsu, Kazuo Furihata, Feifei Wei, Masanori Koda, Takuya Miyakawa, Masaru Tanokura
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-017-07015-z

Biochemical profiling of diabetes disease progression by multivariate vibrational microspectroscopy of the pancreas
Cited by: 9
Author(s): Christoffer Nord, Maria Eriksson, Andrea Dicker, Anna Eriksson, Eivind Grong, Erwin Ilegems, Ronald Mårvik, Bård Kulseng, Per Olof Berggren, András Gorzsás, Ulf Ahlgren
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-020-57468-y

Evidence of altered mucosa-associated and fecal microbiota composition in patients with Irritable Bowel Syndrome
Cited by: 33
Author(s): Johanna Sundin, Imran Aziz, Sofia Nordlander, Annikka Polster, Yue Hu, Luisa W. Hugerth, Alexandra Pennhag, Lars Engstrand, Hans Törnblom, Magnus Simrén, Lena Öhman
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-017-09431-7

Biogeography shaped the metabolome of the genus Espeletia: a phytochemical perspective on an Andean adaptive radiation
Cited by: 25
Author(s): Guillermo F. Padilla-González, Mauricio Diazgranados, Fernando Batista Da Costa
Software Mentions: 3
Published: over 8 years ago

10.1038/srep22525

Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with coronary heart disease
Cited by: 103
Author(s): Qiang Feng, Zhipeng Liu, Shilong Zhong, Ruijun Li, Huihua Xia, Zhuye Jie, Bo Wen, Xiaomin Chen, Wei Yan, Yanqun Fan, Zhenyu Guo, Nan Meng, Jiyan Chen, Yu Xin, Zhiwei Zhang, Karsten Kristiansen, Jun Wang, Xun Xu, Kunlun He, Guanglei Li
Software Mentions: 3
Published: almost 10 years ago

10.3389/fnut.2021.702085

Changes in Intestinal Flora Structure and Metabolites Are Associated With Myocardial Fibrosis in Patients With Persistent Atrial Fibrillation
Cited by: 4
Author(s): Langsha Liu, Juan Su, Rui Li, Fanyan Luo
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-018-19630-5

A procession of metabolic alterations accompanying muscle senescence in Manduca sexta
Cited by: 9
Author(s): Bernard Wone, Jason M. Kinchen, Elana R. Kaup
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-27964-3

Gut microbiota components are associated with fixed airway obstruction in asthmatic patients living in the tropics
Cited by: 14
Author(s): Emiro Buendía, Josefina Zakzuk, Homero San‐Juan‐Vergara, Eduardo Zurek, Nadim J. Ajami, Luis Caraballo
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2020.564579

Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis
Cited by: 17
Author(s): Xunmin Tan, Yu Huang, Tingjia Chai, Xiaoli Zhao, Yifan Li, Jing Wu, Hanping Zhang, Jiajia Duan, Weiwei Liang, Bangmin Yin, Ke Cheng, Gang Yu, Peng Zheng, Peng Xie
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-017-12254-1

Large-scale Metabolomic Analysis Reveals Potential Biomarkers for Early Stage Coronary Atherosclerosis
Cited by: 31
Author(s): Xueqin Gao, Chaofu Ke, Haixia Liu, Wei Liu, Kang Li, Bo Yu, Meng Sun
Software Mentions: 3
Published: over 8 years ago

10.1038/srep17141

Preterm gut microbiota and metabolome following discharge from intensive care
Cited by: 36
Author(s): Christopher J. Stewart, Tom Skeath, Andrew Nelson, Sara Johansson Fernstad, Emma C. L. Marrs, John D. Perry, Stephen Cummings, Janet Berrington, Nicholas D. Embleton
Software Mentions: 3
Published: about 10 years ago

10.3389/fimmu.2021.694344

Mechanism of the Immunomodulatory Effect of the Combination of Live Bifidobacterium, Lactobacillus, Enterococcus, and Bacillus on Immunocompromised Rats
Cited by: 15
Author(s): Longxian Lv, Deguang Mu, Yi‐Ling Du, Yan Ren, Huiyong Jiang
Software Mentions: 3
Published: over 4 years ago

10.3389/fmicb.2016.00701

Induction of Subacute Ruminal Acidosis Affects the Ruminal Microbiome and Epithelium
Cited by: 102
Author(s): Joshua C McCann, Shaoyu Luan, F.C. Cardoso, Hooman Derakhshani, Ehsan Khafipour, Juan J. Loor
Software Mentions: 3
Published: over 9 years ago

10.1038/srep10375

A comparative analysis of high-throughput platforms for validation of a circulating microRNA signature in diabetic retinopathy
Cited by: 58
Author(s): Ryan J. Farr, Andrzej S. Januszewski, Mugdha V. Joglekar, Helena Liang, Annie K. McAulley, Alex W. Hewitt, Helen E. Thomas, Thomas Loudovaris, Thomas W. H. Kay, Alicia J. Jenkins, Anandwardhan A. Hardikar
Software Mentions: 2
Published: over 10 years ago

10.3389/fphar.2018.01530

A Cell-Based Metabonomics Approach to Investigate the Varied Influences of Chrysophanol-8-O-β-D-Glucoside With Different Concentrations on L-02 Cells
Cited by: 9
Author(s): Meichen Liu, Xiaohong Gong, Yunyun Quan, Yanmin Zhou, Yunxia Li, Cheng Peng
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-49319-2

Metabolic modulations of Pseudomonas graminis in response to H2O2 in cloud water
Cited by: 7
Author(s): Nolwenn Wirgot, Marie Lagrée, Mounir Traı̈kia, Ludovic Besaury, Pierre Amato, Isabelle Canet, Martine Sancelme, Cyril Jousse, Binta Diémé, Bernard Lyan, Anne-Marie Delort
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-48107-2

Label-free assessment of pre-implantation embryo quality by the Fluorescence Lifetime Imaging Microscopy (FLIM)-phasor approach
Cited by: 26
Author(s): Ning Ma, Nabora Reyes de Mochel, Paula Duyen Pham, Tae Yeon Yoo, Ken W. Y. Cho, Michelle A. Digman
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-50413-8

Circulating Sphingosine-1-Phosphate as A Non-Invasive Biomarker of Heart Transplant Rejection
Cited by: 9
Author(s): Estefanía Tarazón, Carolina Gil-Cayuela, Maria García‐Manzanares, Marta Roca, Francisca Lago, José Ramón González-Juanatey, Elena Sánchez‐Lacuesta, Luis Martínez‐Dolz, Manuel Portolés, Esther Roselló‐Lletí
Software Mentions: 2
Published: over 6 years ago

10.3389/fphar.2019.00845

Dissecting the Metabolic Phenotype of the Antihypertensive Effects of Five Uncaria Species on Spontaneously Hypertensive Rats
Cited by: 15
Author(s): Zijin Feng, Jinjun Hou, Yang Yu, Wenyong Wu, Yanping Deng, Xia Wang, Haijuan Zhi, Linlin Zhang, Wanying Wu, De‐An Guo
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-51117-9

Untargeted metabolomic analysis of the carotenoid-based orange coloration in Haliotis gigantea using GC-TOF-MS
Cited by: 9
Author(s): Wei Xiao-Hui, Nan Chen, Bin Tang, Xuan Luo, You Wang, Caihuan Ke
Software Mentions: 2
Published: about 6 years ago

10.3389/fnins.2019.01266

Place and Temporal Cues in Cochlear Implant Pitch and Melody Perception
Cited by: 14
Author(s): Brett A. Swanson, Vijay Marimuthu, Robert Mannell
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-019-53287-y

Postoperative serum metabolites of patients on a low carbohydrate ketogenic diet after pancreatectomy for pancreatobiliary cancer: a nontargeted metabolomics pilot study
Cited by: 22
Author(s): Chang Moo Kang, Bo Kyeong Yun, Min-Ju Kim, Min‐Young Song, Yeon Hee Kim, Sung Hwan Lee, Hosun Lee, Song Mi Lee, Seung Min Lee
Software Mentions: 2
Published: about 6 years ago

10.3389/fphar.2019.00183

Metabolomics Analysis of L-Arginine Induced Gastrointestinal Motility Disorder in Rats Using UPLC-MS After Magnolol Treatment
Cited by: 17
Author(s): Xiao Wang, Chen Zhang, Miaoyan Zheng, Fei Gao, Jinming Zhang, Fang Liu
Software Mentions: 2
Published: almost 7 years ago

10.3389/fnins.2020.00777

Quantitative Profiling of Oxylipins in Acute Experimental Intracerebral Hemorrhage
Cited by: 4
Author(s): Junjie Yuan, Qiong Chen, Xiao‐Yi Xiong, Qin Zhang, Qiang Xie, Jiacheng Huang, Guoqiang Yang, Chang‐Xiong Gong, Zhongming Qiu, Hong-Fei Sang, Wenjie Zi, Qian He, Rui Xu, Qingwu Yang
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.02451

Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan
Cited by: 8
Author(s): Taha Soliman, James Davis Reimer, Sung‐Yin Yang, Alejandro Villar‐Briones, Michael C. Roy, Holger Jenke‐Kodama
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2020.01550

Gut Microbiome and Metabolome Were Altered and Strongly Associated With Platelet Count in Adult Patients With Primary Immune Thrombocytopenia
Cited by: 11
Author(s): Xuewu Zhang, Silan Gu, Liangshun You, Yu Xu, De Zhou, Yunbo Chen, Yan Ren, Huiyong Jiang, Yating Li, Longxian Lv, W. Qian
Software Mentions: 2
Published: over 5 years ago

10.3389/fimmu.2021.671239

Patients With Common Variable Immunodeficiency (CVID) Show Higher Gut Bacterial Diversity and Levels of Low-Abundance Genes Than the Healthy Housemates
Cited by: 12
Author(s): Juraj Bosák, Matej Lexa, Kristýna Fiedorová, Darshak Gadara, Lenka Micenková, Zdeněk Spáčil, Jiří Litzman, Tomáš Freiberger, David Šmajs
Software Mentions: 2
Published: over 4 years ago

10.1038/srep23334

Metabolic phenotyping for monitoring ovarian cancer patients
Cited by: 41
Author(s): Chaofu Ke, Ang Li, Yan Hou, Meng Sun, Kai Yang, Jinlong Cheng, Jingtao Wang, Tingting Ge, Fan Zhang, Qiang Li, Junnan Li, Ying Wu, Ge Lou, Kang Li
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmicb.2021.649091

Multi-Omics Analysis Reveals Disturbance of Nanosecond Pulsed Electric Field in the Serum Metabolic Spectrum and Gut Microbiota
Cited by: 1
Author(s): Yeping Dong, Jiahua Lu, Ting Wang, Zhiliang Huang, Xinhua Chen, Zhigang Ren, Hong Ling, Ang Li, Dezhi Yang, Haiyang Xie, Zengwen Wu
Software Mentions: 2
Published: over 4 years ago

10.3389/fphys.2020.578799

Urine Metabolomics Analysis in Patients With Normoalbuminuric Diabetic Kidney Disease
Cited by: 12
Author(s): Qian Feng, Yuanmeng Li, Yuwei Yang, Jiafu Feng
Software Mentions: 2
Published: over 5 years ago

10.3389/fphys.2019.01279

Simulated Weightlessness Perturbs the Intestinal Metabolomic Profile of Rats
Cited by: 12
Author(s): Mingliang Jin, Jiaojiao Wang, Hao Zhang, Hongbin Zhou, Ke Zhao
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-017-18458-9

Application of variable selection in the origin discrimination of Wolfiporia cocos (F.A. Wolf) Ryvarden & Gilb. based on near infrared spectroscopy
Cited by: 12
Author(s): Tian-Jun Yuan, Yanli Zhao, Ji Zhang, Yuanzhong Wang
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-017-18674-3

Systematic analysis of the regulatory roles of microRNAs in postnatal maturation and metergasis of liver of breeder cocks
Cited by: 0
Author(s): Shengru Wu, Wei Guo, Saisai Liang, Hong Lü, Wenqiang Sun, Xiaochun Ren, Qingzhu Sun, Xiaojun Yang
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-018-22031-3

ATLANTIS - Attractor Landscape Analysis Toolbox for Cell Fate Discovery and Reprogramming
Cited by: 12
Author(s): Osama Shiraz Shah, Muhammad Faizyab Ali Chaudhary, Hira Anees Awan, Fizza Fatima, Zainab Arshad, Amina Bibi, Maria Ahmed, Hadia Hameed, Muhammad Furqan, Shareef Khalid, Amir Faisal, Safee Ullah Chaudhary
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2016.00446

Mycobacterium avium Subspecies paratuberculosis Infection Modifies Gut Microbiota under Different Dietary Conditions in a Rabbit Model
Cited by: 31
Author(s): Rakel Arrazuria, Natalia Elguezabal, Ramón A. Juste, Hooman Derakhshani, Ehsan Khafipour
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmolb.2021.636599

Characterization of Weak Protein Domain Structure by Spin-Label Distance Distributions
Cited by: 8
Author(s): Irina Ritsch, Laura Esteban-Hofer, Elisabeth Lehmann, Leonidas Emmanouilidis, Maxim Yulikov, Frédéric H.‐T. Allain, Gunnar Jeschke
Software Mentions: 2
Published: over 4 years ago

10.3389/fmed.2014.00027

Patterns of Circulating Inflammatory Biomarkers in Older Persons with Varying Levels of Physical Performance: A Partial Least Squares-Discriminant Analysis Approach
Cited by: 34
Author(s): Emanuele Marzetti, Francesco Landi, Federico Marini, Matteo Cesari, Thomas W. Buford, Todd M. Manini, Graziano Onder, Marco Pahor, Roberto Bernabei, Christiaan Leeuwenburgh, Riccardo Calvani
Software Mentions: 2
Published: over 11 years ago

10.1038/srep35037

Comprehensive Plasma Metabolomic Analyses of Atherosclerotic Progression Reveal Alterations in Glycerophospholipid and Sphingolipid Metabolism in Apolipoprotein E-deficient Mice
Cited by: 50
Author(s): Vi Dang, Aric Huang, Lexy H Zhong, Yuanyuan Shi, Geoff H. Werstuck
Software Mentions: 2
Published: about 9 years ago

10.3389/fonc.2020.601620

Effect of Carbon Ion Radiation Induces Bystander Effect on Metastasis of A549 Cells and Metabonomic Correlation Analysis
Cited by: 3
Author(s): Zhen Yang, Qiuning Zhang, Hui Luo, Lihua Shao, Ruifeng Liu, Yarong Kong, Xueshan Zhao, Yichao Geng, Chengcheng Li, Xiaohu Wang
Software Mentions: 2
Published: almost 5 years ago

10.1038/srep36490

Concurrent profiling of polar metabolites and lipids in human plasma using HILIC-FTMS
Cited by: 27
Author(s): Xiaoming Cai, Ruibin Li
Software Mentions: 2
Published: about 9 years ago

10.1038/s41598-018-31243-6

Sexual difference of small RNA expression in Tetralogy of Fallot
Cited by: 10
Author(s): Bo Wang, Guoyong Shi, Zhongqun Zhu, Huiwen Chen, Qin Fu
Software Mentions: 2
Published: over 7 years ago

10.3389/fonc.2017.00325

Plasma Lipidomic Signature of Rectal Adenocarcinoma Reveals Potential Biomarkers
Cited by: 22
Author(s): Márcia Cristina Fernandes Messias, Giovana Colozza Mecatti, Célio Fernando Figueiredo Angolini, Marcos N. Eberlin, Laura Credidio, Carlos Augusto Real Martinez, Cláudio Saddy Rodrigues Coy, Patrícia de Oliveira Carvalho
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2016.02151

Human Catestatin Alters Gut Microbiota Composition in Mice
Cited by: 25
Author(s): Mohammad Fazle Rabbi, Peris M. Munyaka, Nour Eissa, Marie‐Hélène Metz‐Boutigue, Ehsan Khafipour, Jean–Eric Ghia
Software Mentions: 2
Published: almost 9 years ago

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