Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: CPAT

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/CPAT

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Papers Mentioning CPAT 299

10.1186/s12864-021-07498-1
Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation
Cited by: 12
Author(s): Zehai Hou, Fengming Shi, Si-Xun Ge, Jing Tao, Lili Ren, Hao Wu, Shixiang Zong
Software Mentions: 2
Published: over 3 years ago
10.1186/s12711-018-0391-0
Cross-species inference of long non-coding RNAs greatly expands the ruminant transcriptome
Cited by: 24
Author(s): Stephen J. Bush, Charity Muriuki, Mary E. B. McCulloch, Iseabail L. Farquhar, Emily L. Clark, David Hume
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0114191
De Novo Assembly and Transcriptome Analysis of the Mediterranean Fruit Fly Ceratitis capitata Early Embryos
Cited by: 16
Author(s): Marco Salvemini, Kallare P. Arunkumar, Javaregowda Nagaraju, Remo Sanges, Valeria Petrella, Archana Tomar, Hongyu Zhang, Weiwei Zheng, Giuseppe Saccone
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0221104
LncRNA expression profile during autophagy and Malat1 function in macrophages
Cited by: 26
Author(s): Zhanbing Ma, Jing Zhang, Xiangrong Xu, Yuliang Qu, Hui Dong, Jiehui Deng, Zhenghao Huo, Guofeng Xu
Software Mentions: 2
Published: over 5 years ago
10.1093/gbe/evu279
Comprehensive Transcriptome Analysis Reveals Accelerated Genic Evolution in a Tibet Fish, Gymnodiptychus pachycheilus
Cited by: 78
Author(s): Liandong Yang, Ying Wang, Zhaolei Zhang, Shunping He
Software Mentions: 2
Published: almost 10 years ago
10.1186/s12864-018-5275-8
Identifying sequence features that drive ribosomal association for lncRNA
Cited by: 23
Author(s): Chao Zeng, Michiaki Hamada
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0238942
Single-molecule real-time sequencing of the full-length transcriptome of loquat under low-temperature stress
Cited by: 6
Author(s): Cuiping Pan, Yongqing Wang, Lian Tao, Hui Zhang, Deng Qunxian, Zhongfu Yang, Zhuoheng Chi, Yunmiao Yang
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0225602
Screening and characterization of long noncoding RNAs involved in the albinism of Ananas comosus var. bracteatus leaves
Cited by: 4
Author(s): Zhen Yuan Lin, Yingyuan Xiong, Ying Xue, Meiqin Mao, Yixuan Xiang, Yehua He, Fatima Rafique, Hao Hu, Jiawen Liu, Xi Li, Lina Sun, Zhuo Huang, Jun Ma
Software Mentions: 2
Published: about 5 years ago
10.1016/j.gpb.2017.01.007
Non-coding RNAs and Their Roles in Stress Response in Plants
Cited by: 135
Author(s): Jingjing Wang, Xianwen Meng, O. B. Dobrovolskaya, Yuriy L. Orlov, Ming Chen
Software Mentions: 2
Published: about 7 years ago
10.3390/geriatrics4030041
Associations between Neighborhood Open Space Features and Walking and Social Interaction in Older Adults—A Mixed Methods Study
Cited by: 33
Author(s): Tanja Schmidt, Jacqueline Kerr, Jasper Schipperijn
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0154567
LncRNApred: Classification of Long Non-Coding RNAs and Protein-Coding Transcripts by the Ensemble Algorithm with a New Hybrid Feature
Cited by: 47
Author(s): Cong Pian, Guangle Zhang, Zhi Chen, Yuanyuan Chen, Jin Zhang, Tao Yang, Liangyun Zhang
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pbio.2004204
Noncoding RNA Ginir functions as an oncogene by associating with centrosomal proteins
Cited by: 23
Author(s): Suchismita Panda, Meenakshi Setia, Navjot Kaur, Varsha Shepal, Vivek Arora, Divya Singh, Abir Mondal, Abhishek Teli, Madhura Tathode, Rajendra P. Gajula, L. C. Padhy, Anjali Shiras
Software Mentions: 2
Published: about 6 years ago
10.1038/s41437-020-0319-7
Evolution of novel genes in three-spined stickleback populations
Cited by: 19
Author(s): Julia Schmitz, Frédéric J. J. Chain, Erich Bornberg‐Bauer
Software Mentions: 2
Published: over 4 years ago
10.1038/s41438-019-0218-3
Functional identification of lncRNAs in sweet cherry (Prunus avium) pollen tubes via transcriptome analysis using single-molecule long-read sequencing
Cited by: 7
Author(s): Yang Li, Changde Wu, Chunsheng Liu, Jie Yu, Xiaoqun Duan, Wenqi Fan, Jing Wang, Xiaoming Zhang, Guohua Yan, Tianzhong Li, Kaichun Zhang
Software Mentions: 2
Published: almost 5 years ago
10.7717/peerj.7062
SMRT sequencing analysis reveals the full-length transcripts and alternative splicing patterns in <i>Ananas comosus</i> var. <i>bracteatus</i>
Cited by: 10
Author(s): Jun Ma, Yixuan Xiang, Yingyuan Xiong, Zhen Yuan Lin, Ying Xue, Meiqin Mao, Lina Sun, Yujue Zhou, Xi Li, Zhuo Huang
Software Mentions: 2
Published: over 5 years ago
10.1186/1471-2164-15-167
Transcriptome analyses and differential gene expression in a non-model fish species with alternative mating tactics
Cited by: 73
Author(s): Celia Schunter, Steven V. Vollmer, Enrique Macpherson, Marta Pascual
Software Mentions: 2
Published: almost 11 years ago
10.7717/peerj.7404
Therapeutic effect of Bacillus Calmette–Guerin polysaccharide nucleic acid on mast cell at the transcriptional level
Cited by: 7
Author(s): Siyu Yan, Jie Li, Manyun Mao, Zhao‐Qian Liu, Wei Zhang, Yi Zhang, Jie Li, Cong Peng
Software Mentions: 2
Published: over 5 years ago
10.1186/s12859-020-03884-w
IIMLP: integrated information-entropy-based method for LncRNA prediction
Cited by: 1
Author(s): Junyi Li, Huinian Li, Yegui Xiao, Li Zhang, Qingzhe Xu, Yuan Ping, Xiaozhu Jing, Wei Jiang, Qing Liao, Bo Liu, Yadong Wang
Software Mentions: 2
Published: over 3 years ago
10.1111/jcmm.15210
Long non‐coding RNA AK085865 ablation confers susceptibility to viral myocarditis by regulating macrophage polarization
Cited by: 14
Author(s): Yingying Zhang, Xueqin Li, Kuanhui Xiang, Mengying Zhang, Deguo Wang, Yinhua Liu, Kun Lv
Software Mentions: 2
Published: over 4 years ago
10.3390/ijms17121943
Comprehensive Transcriptome Analysis Provides Evidence of Local Thermal Adaptation in Three Loaches (Genus: Misgurnus)
Cited by: 8
Author(s): Shaokui Yi, Qianqian Wang, Jia Zhong, Weimin Wang
Software Mentions: 2
Published: almost 8 years ago
10.7717/peerj.9585
Genome-wide discovery and characterization of long noncoding RNAs in African oil palm (<i>Elaeis guineensis</i>Jacq.)
Cited by: 3
Author(s): Wei Xia, Yajing Dou, Rui Li, Shufang Gong, Dong Huang, Hang Fan, Yong Xiao
Software Mentions: 2
Published: about 4 years ago
10.1111/jcmm.16652
TMEM161B‐AS1 suppresses proliferation, invasion and glycolysis by targeting miR‐23a‐3p/HIF1AN signal axis in oesophageal squamous cell carcinoma
Cited by: 12
Author(s): Zuxuan Shi, Guanghui Li, Zhen Li, Junhao Liu, Yu Tang
Software Mentions: 2
Published: over 3 years ago
10.1002/jcla.22962
The long non‐coding RNA OLC8 enhances gastric cancer by interaction with <i>IL‐11</i>
Cited by: 11
Author(s): Rongjia Zhou, Zhan-bin Wu, Xixiang Deng, Haojun Chen
Software Mentions: 2
Published: over 5 years ago
10.1002/jcla.23312
Analysis of lncRNA UCA1‐related downstream pathways and molecules of cisplatin resistance in lung adenocarcinoma
Cited by: 7
Author(s): Huixing Zhou, Qiang Shen, Jiali Fu, Feng Jiang, Liangxing Wang, Yumin Wang
Software Mentions: 2
Published: over 4 years ago
10.1002/jcla.23462
The long non‐coding RNA HLNC1 potentiates hepatocellular carcinoma progression via interaction with <i>USP49</i>
Cited by: 7
Author(s): Xinye Qian, Shitong Li, Zhoujing Yang, Jun Zhang
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.ppat.1008670
Long noncoding RNA MARL regulates antiviral responses through suppression miR-122-dependent MAVS downregulation in lower vertebrates
Cited by: 59
Author(s): Qing Chu, Tianjun Xu, Weiwei Zheng, Ruidong Chang, Lei Zhang
Software Mentions: 2
Published: over 4 years ago
10.1186/s12958-020-00573-4
Systematic identification of long intergenic non-coding RNAs expressed in bovine oocytes
Cited by: 9
Author(s): Jian Wang, Prasanthi P. Koganti, Jianbo Yao
Software Mentions: 2
Published: almost 5 years ago
10.7717/peerj.7933
Single-molecule real-time sequencing identifies massive full-length cDNAs and alternative-splicing events that facilitate comparative and functional genomics study in the hexaploid crop sweet potato
Cited by: 3
Author(s): Na Ding, Cui Huihui, Ying Miao, Jun Tang, Qinghe Cao, Yue‐Bei Luo
Software Mentions: 2
Published: about 5 years ago
10.1038/srep14642
Genome wide discovery of long intergenic non-coding RNAs in Diamondback moth (Plutella xylostella) and their expression in insecticide resistant strains
Cited by: 74
Author(s): Kayvan Etebari, Michael J. Furlong, Sassan Asgari
Software Mentions: 2
Published: about 9 years ago
10.1038/srep23330
Genome-wide identification and developmental expression profiling of long noncoding RNAs during Drosophila metamorphosis
Cited by: 55
Author(s): Bing Chen, Yi Zhang, Xia Zhang, Shili Jia, Shuang Chen, Le Kang
Software Mentions: 2
Published: over 8 years ago
10.1038/srep32172
Long noncoding RNA linc00598 regulates CCND2 transcription and modulates the G1 checkpoint
Cited by: 11
Author(s): Oh-Seok Jeong, Yun-Cheol Chae, Hyeonsoo Jung, Soon Cheol Park, Sung–Jin Cho, Hyun Kook, Sang-Beom Seo
Software Mentions: 2
Published: about 8 years ago
10.3390/v10100556
Characterization of Critical Functions of Long Non-Coding RNAs and mRNAs in Rhabdomyosarcoma Cells and Mouse Skeletal Muscle Infected by Enterovirus 71 Using RNA-Seq
Cited by: 20
Author(s): Ying Liu, Chao Zhang, Luwei Qin, Dong Liu, Guangyuan Zhou, Dejian Dang, Shuaiyin Chen, Tiantian Sun, Rongguang Zhang, Weidong Wu, Yang Xi, Yuefei Jin
Software Mentions: 2
Published: about 6 years ago
10.1080/21505594.2021.1938806
Long noncoding RNAs are potentially involved in the degeneration of virulence in an aphid-obligate pathogen, <i>Conidiobolus obscurus</i> (Entomophthoromycotina)
Cited by: 5
Author(s): Guofang Ye, Lvhao Zhang, Xiang Zhou
Software Mentions: 2
Published: over 3 years ago
10.1038/srep34892
Computational identification of putative lincRNAs in mouse embryonic stem cell
Cited by: 2
Author(s): Hui Liu, Jia Lyu, Hongbo Liu, Yang Gao, Jing Guo, Hongbin He, Ze‐Guang Han, Yan Zhang, Qiong Wu
Software Mentions: 2
Published: about 8 years ago
10.3390/ijms19103066
Transcriptome Sequencing Reveals the Differentially Expressed lncRNAs and mRNAs Involved in Cryoinjuries in Frozen-Thawed Giant Panda (Ailuropoda melanoleuca) Sperm
Cited by: 20
Author(s): Mingxia Ran, Liyuan Ma, Yan Zhang, Keke Liang, Ying-Nan Ren, Ming Zhang, Guangbin Zhou, Yingmin Zhou, Kai Wu, Chengdong Wang, Yan Huang, Bo Luo, Izhar Hyder Qazi, Hemin Zhang, Changjun Zeng
Software Mentions: 2
Published: about 6 years ago
10.1186/s12943-018-0829-6
LncRNA MT1JP functions as a ceRNA in regulating FBXW7 through competitively binding to miR-92a-3p in gastric cancer
Cited by: 198
Author(s): Gang Zhang, Shuwei Li, Jiafeng Lü, Yuqiu Ge, Qiaoyan Wang, Gaoxiang Ma, Qinghong Zhao, Dongdong Wu, Weida Gong, Mulong Du, Haiyan Chu, Meilin Wang, Aihua Zhang, Zhengdong Zhang
Software Mentions: 2
Published: over 6 years ago
10.3390/life11040287
Full-Length Transcriptome Sequencing Provides Insights into Flavonoid Biosynthesis in Fritillaria hupehensis
Cited by: 12
Author(s): Kunyuan Guo, Jie Chen, Yan D. Niu, Xianming Lin
Software Mentions: 2
Published: over 3 years ago
10.1093/bib/bbaa045
CodAn: predictive models for precise identification of coding regions in eukaryotic transcripts
Cited by: 15
Author(s): Pedro Gabriel Nachtigall, André Yoshiaki Kashiwabara, Alan Mitchell Durham
Software Mentions: 2
Published: over 4 years ago
10.1093/bib/bbz175
Closing the circle: current state and perspectives of circular RNA databases
Cited by: 65
Author(s): Marieke Vromman, Jo Vandesompele, Pieter-Jan Volders
Software Mentions: 2
Published: almost 5 years ago
10.1186/s13068-019-1358-2
Identification of genes associated with ricinoleic acid accumulation in Hiptage benghalensis via transcriptome analysis
Cited by: 16
Author(s): Bo Tian, Tianquan Lu, Yang Xu, Ruling Wang, Guanqun Chen
Software Mentions: 2
Published: almost 6 years ago
10.1155/2017/6152582
Systematic Identification and Molecular Characteristics of Long Noncoding RNAs in Pig Tissues
Cited by: 18
Author(s): Yalan Yang, Rong Zhou, Shiyun Zhu, Xunbi Li, Hua Li, Hui Yu, Kui Li
Software Mentions: 2
Published: almost 8 years ago
10.1186/s40364-021-00262-3
LncRNA APCDD1L-AS1 induces icotinib resistance by inhibition of EGFR autophagic degradation via the miR-1322/miR-1972/miR-324-3p-SIRT5 axis in lung adenocarcinoma
Cited by: 26
Author(s): Jie Wu, Chunlei Zheng, Yizhe Wang, Zichang Yang, Ce Li, Wanxia Fang, Yue Jin, Kezuo Hou, Yang Cheng, Jianfei Qi, Xiujuan Qu, Yunpeng Liu, Xiaofang Che, Xuejun Hu
Software Mentions: 2
Published: almost 4 years ago
10.1093/bioinformatics/bty572
IRSOM, a reliable identifier of ncRNAs based on supervised self-organizing maps with rejection
Cited by: 8
Author(s): Ludovic Platon, Farida Zehraoui, Abdelhafid Bendahmane, Fariza Tahi
Software Mentions: 2
Published: about 6 years ago
10.1038/s41598-018-20181-y
SMRT sequencing of full-length transcriptome of flea beetle Agasicles hygrophila (Selman and Vogt)
Cited by: 41
Author(s): Jingao Dong, Yuanxin Wang, Yanhong Liu, Jun Hu, Yingjie Guo, Lingling Gao, Ronghua Ma
Software Mentions: 2
Published: almost 7 years ago
10.3390/ani9040152
Comparative Transcriptomics Reveal Key Sheep (Ovis aries) Hypothalamus LncRNAs that Affect Reproduction
Cited by: 19
Author(s): Zhuangbiao Zhang, Jiao Tang, Ran Di, Qiuyue Liu, Xiangyu Wang, Shangquan Gan, Xiaosheng Zhang, Jinlong Zhang, Wenping Hu, Mingxing Chu
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-018-35066-3
Single-molecule long-read sequencing facilitates shrimp transcriptome research
Cited by: 33
Author(s): Dingyuan Zeng, Xiuli Chen, J. Peng, Chunling Yang, Min Peng, Weilin Zhu, Daxiang Xie, Pingping He, Pinyuan Wei, Yong Lin, Yongzhen Zhao
Software Mentions: 2
Published: about 6 years ago
10.3762/bjnano.10.148
Synthesis of P- and N-doped carbon catalysts for the oxygen reduction reaction via controlled phosphoric acid treatment of folic acid
Cited by: 6
Author(s): Ryosuke Kobayashi, Takafumi Ishii, Yasuo Imashiro, Jun‐ichi Ozaki
Software Mentions: 2
Published: over 5 years ago
10.1186/s12864-017-4178-4
A Support Vector Machine based method to distinguish long non-coding RNAs from protein coding transcripts
Cited by: 45
Author(s): Hugo Wruck Schneider, Tainá Raiol, Marcelo de Macedo Brígido, Maria Emília M. T. Walter, Peter F. Stadler
Software Mentions: 2
Published: about 7 years ago
10.3390/ijms20112820
Genome-Wide Analysis of Coding and Long Non-Coding RNAs Involved in Cuticular Wax Biosynthesis in Cabbage (Brassica oleracea L. var. capitata)
Cited by: 12
Author(s): Xiaowei Zhu, Xiang Tai, Yue Ren, Jinxiu Chen, Tianyue Bo
Software Mentions: 2
Published: over 5 years ago
10.1186/s12864-019-6093-3
Long noncoding RNAs in lipid metabolism: literature review and conservation analysis across species
Cited by: 54
Author(s): Kévin Muret, Colette Désert, Laëtitia Lagoutte, Morgane Boutin, Florence Gondret, Tatiana Zerjal, Sandrine Lagarrigue
Software Mentions: 2
Published: about 5 years ago
10.18632/oncotarget.18269
Comparative analyses of long non-coding RNA in lean and obese pigs
Cited by: 39
Author(s): Yongcheng Lin, Lina Tai, Lifang Zhang, Yi Chu, Yixing Li, Lei Zhou
Software Mentions: 2
Published: over 7 years ago
10.1186/s12864-017-4352-8
Genomic signature of highland adaptation in fish: a case study in Tibetan Schizothoracinae species
Cited by: 25
Author(s): Chao Tong, Fei Tian, Kai Zhao
Software Mentions: 2
Published: almost 7 years ago
10.18632/oncotarget.18178
Identification and validation long non-coding RNAs of oral squamous cell carcinoma by bioinformatics method
Cited by: 16
Author(s): Meng Yang, Xingliang Xiong, Longcong Chen, Yang Li, Xian Li
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-019-54710-0
Full-Length Transcriptome Survey and Expression Analysis of Parasitoid Wasp Chouioia cunea upon Exposure to 1-Dodecene
Cited by: 4
Author(s): Lina Pan, Meiqi Guo, Xin Jin, Zhiguo Sun, Hao Jiang, Jiayi Han, Yonghui Wang, Chuncai Yan, Min Li
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-56027-4
Transcriptome alteration spectrum in rat lung induced by radiotherapy
Cited by: 8
Author(s): Tao Zhang, Guowei Cheng, Li Sun, Lei Deng, Xin Wang, Nan Bi
Software Mentions: 2
Published: almost 5 years ago
10.1186/1471-2164-15-168
Characterisation of Caenorhabditis eleganssperm transcriptome and proteome
Cited by: 46
Author(s): Xuan Ma, Yingjie Zhu, Chunfang Li, Peng Xue, Yanmei Zhao, Shilin Chen, Fuquan Yang, Miao Liu
Software Mentions: 2
Published: over 10 years ago
10.1038/s41598-020-67410-x
Identification and characterization of long non-coding RNA (lncRNA) in the developing seeds of Jatropha curcas
Cited by: 23
Author(s): Xin Yan, Lanqing Ma, Mo Yang
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-71178-5
Characterization and analysis of full-length transcriptomes from two grasshoppers, Gomphocerus licenti and Mongolotettix japonicus
Cited by: 5
Author(s): Hao Yuan, Xue Zhang, Lina Zhao, Huihui Chang, Chao Yang, Zhongying Qiu, Yuan Huang
Software Mentions: 2
Published: about 4 years ago
10.1186/s12889-020-09444-4
Community-derived recommendations for healthcare systems and medical students to support people who are houseless in Portland, Oregon: a mixed-methods study
Cited by: 0
Author(s): Caroline King, Cameron Fisher, Jacob Johnson, Arum Chun, David R. Bangsberg, Paula Carder
Software Mentions: 2
Published: about 4 years ago
10.1186/s12870-020-02608-9
Full-length transcriptome analysis of Phytolacca americana and its congener P. icosandra and gene expression normalization in three Phytolaccaceae species
Cited by: 9
Author(s): Danfeng Liu, Li Chen, Chao Chen, Xiaopeng An, Yongjun Zhang, Yi Wang, Qingjun Liu
Software Mentions: 2
Published: about 4 years ago
10.1186/s12870-019-2119-x
Candidate genes for grape white rot resistance based on SMRT and Illumina sequencing
Cited by: 8
Author(s): Kai Su, Yongfeng Guo, Yuhui Zhao, Hongyan Gao, Zhendong Liu, Kun Li, Lan Ma, Xuewu Guo
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-021-87538-8
Full-length SMRT transcriptome sequencing and microsatellite characterization in Paulownia catalpifolia
Cited by: 6
Author(s): Yanzhi Feng, Yang Zhao, Jiajia Zhang, Baoping Wang, Chaowei Yang, Haijiang Zhou, Jie Qiao
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms22126343
LncRSPH9-4 Facilitates Meningitic Escherichia coli-Caused Blood–Brain Barrier Disruption via miR-17-5p/MMP3 Axis
Cited by: 8
Author(s): Bin Xu, Ruicheng Yang, Jiyang Fu, Bo Yang, Jiaqi Chen, Chen Tan, Huanchun Chen, Xiangru Wang
Software Mentions: 2
Published: over 3 years ago
10.1128/mBio.01292-18
Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum
Cited by: 34
Author(s): Wonyong Kim, Cristina Miguel-Rojas, Jie Wang, Jeffrey P. Townsend, Frances Trail
Software Mentions: 2
Published: about 6 years ago
10.1186/s12966-015-0178-4
Associations between park features and adolescent park use for physical activity
Cited by: 81
Author(s): Nicole Edwards, Paula Hooper, Matthew Knuiman, Sarah Foster, Billie Giles-Corti
Software Mentions: 2
Published: almost 10 years ago
10.3389/fgene.2019.00975
Differentiation of Long Non-Coding RNA and mRNA Expression Profiles in Male and Female Aedes albopictus
Cited by: 15
Author(s): Ye Xu, Yunqiao Dong, Yang Xu, Zetian Lai, Baozhe Jin, Yanqiang Hao, Yonghui Gao, Yan Sun, Xiaoguang Chen, Jiande Gu
Software Mentions: 2
Published: about 5 years ago
10.3389/fgene.2020.00590
Transcriptomic Analysis Reveals the Involvement of lncRNA–miRNA–mRNA Networks in Hair Follicle Induction in Aohan Fine Wool Sheep Skin
Cited by: 15
Author(s): Rongjun Zhao, Jing Li, Nan Liu, Hegang Li, Lirong Liu, Feng Yang, Lanlan Li, Yuan Wang, Jianning He
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2021.635043
PacBio Single-Molecule Long-Read Sequencing Reveals Genes Tolerating Manganese Stress in Schima superba Saplings
Cited by: 18
Author(s): Fiza Liaquat, Muhammad Farooq Hussain Munis, Samiah Arif, Urooj Haroon, Jiannong Shi, Saddam Saqib, Wajid Zaman, Shengquan Che, Qunlu Liu
Software Mentions: 2
Published: over 3 years ago
10.3389/fgene.2021.704162
The Landscapes of Full-Length Transcripts and Splice Isoforms as Well as Transposons Exonization in the Lepidopteran Model System, Bombyx mori
Cited by: 5
Author(s): Zongrui Dai, Jianyu Ren, Xiaoling Tong, Hai Hu, Kunpeng Lu, Fangyin Dai, Minjin Han
Software Mentions: 2
Published: about 3 years ago
10.3389/fcimb.2017.00461
LncRNA Expression in CD4+ T Cells in Neurosyphilis Patients
Cited by: 9
Author(s): Li‐Li Liu, Shao-Gang Zhu, Xiaoyong Jiang, Jun Ren, Yong Lin, Ningning Zhang, Man‐Li Tong, Huilin Zhang, Weihong Zheng, Fang Huang, Haijuan Luo, Li‐Rong Lin, Jianghua Yan
Software Mentions: 2
Published: about 7 years ago
10.7150/ijbs.52279
Linc-KILH potentiates Notch1 signaling through inhibiting KRT19 phosphorylation and promotes the malignancy of hepatocellular carcinoma
Cited by: 5
Author(s): Xudong Zhang, Xiaoliang Xu, Zechuan Zhang, Cailin Xue, Zhongxin Kong, Si-Pei Wu, Yun Xiao, Yue Fu, Chen Zhu, Xihu Qin
Software Mentions: 2
Published: almost 4 years ago
10.1186/s13046-019-1169-0
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF
Cited by: 63
Author(s): Morvarid Saeinasab, Ahmad Reza Bahrami, Jovanna González, Francesco P. Marchese, Dannys Martínez, Seyed Javad Mowla, Maryam Moghaddam Matin, Maite Huarte
Software Mentions: 2
Published: over 5 years ago
10.3389/fcell.2020.00429
Long Noncoding RNA LINC01134 Promotes Hepatocellular Carcinoma Metastasis via Activating AKT1S1 and NF-κB Signaling
Cited by: 15
Author(s): Chao Wang, Yan Chen, Kunlun Chen, Lei Zhang
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2021.633750
CircRNA May Not Be “Circular”
Cited by: 5
Author(s): Handong Sun, Zijuan Wu, Ming Liu, Liang Yu, Jianyong Li, Jinwen Zhang, Xiangming Ding, Hui Jin
Software Mentions: 2
Published: almost 4 years ago
10.1186/s12915-019-0635-7
Identification of functional long non-coding RNAs in C. elegans
Cited by: 29
Author(s): Alper Akay, David Jordan, Isabela Cunha Navarro, Tomasz Wrzesiński, Chris P. Ponting, Eric A. Miska, Wilfried Haerty
Software Mentions: 2
Published: almost 6 years ago
10.3389/fcell.2019.00394
Non-coding RNAs Shaping Muscle
Cited by: 22
Author(s): Julie Martone, Davide Mariani, Fabio Desideri, Monica Ballarino
Software Mentions: 2
Published: almost 5 years ago
10.3389/fgene.2020.615378
Deregulation of a Cis-Acting lncRNA in Non-small Cell Lung Cancer May Control HMGA1 Expression
Cited by: 4
Author(s): Greg L. Stewart, Adam P. Sage, Katey S.S. Enfield, Erin A. Marshall, David E. Cohn, Wan L. Lam
Software Mentions: 2
Published: almost 4 years ago
10.3389/fgene.2020.01010
PacBio Long-Read Sequencing Transcriptome Dataset of Adult Harmonia axyridis Under Diapause Inducing and Reproductive Inducing Photoperiod
Cited by: 3
Author(s): Qiao Gao, Wen Liu, Jialu Wang, Xiaoping Wang, Xingmiao Zhou
Software Mentions: 2
Published: about 4 years ago
10.1186/s13046-020-01725-5
Long noncoding RNA Linc00337 functions as an E2F1 co-activator and promotes cell proliferation in pancreatic ductal adenocarcinoma
Cited by: 8
Author(s): Huakai Wang, Shanshan Yu, Huan Peng, Yijun Shu, Wenjie Zhang, Qingqing Zhu, Yingxia Wu, Yu Xu, Jiqi Yan, Hua Xiang
Software Mentions: 2
Published: about 4 years ago
10.1590/S1980-57642014DN82000003
Instruments for assessing pain in persons with severe dementia
Cited by: 5
Author(s): Natália Lindemann Carezzato, Gabriela Gallego Valera, Francisco Assis Carvalho Vale, Priscilla Hortense
Software Mentions: 2
Published: over 10 years ago
10.1038/s42003-020-0987-0
Long non-coding RNA LASSIE regulates shear stress sensing and endothelial barrier function
Cited by: 30
Author(s): Laura Stanicek, Noelia Lozano-Vidal, Diewertje I. Bink, Aukie Hooglugt, Wenjie Yao, Ilka Wittig, Jos van Rijssel, Jaap D. van Buul, Anke van Bergen, Alina Klems, Anne Sophie Ramms, Ferdinand le Noble, Patrick Hofmann, Robert Szulcek, Sheng Peng Wang, Stefan Offermanns, Meryem S. Ercanoglu, Hyouk Bum Kwon, Didier Y.R. Stainier, Stephan Huveneers, Leo Kurian, Stefanie Dimmeler, Reinier A. Boon
Software Mentions: 2
Published: over 4 years ago
10.1186/s12864-016-2474-z
Functional elucidation of the non-coding RNAs of Kluyveromyces marxianus in the exponential growth phase
Cited by: 1
Author(s): Yoobok Cho, Eun Ju Lee, Suhyung Cho, Tae Yong Kim, Jin Hwan Park, Byung-Kwan Cho
Software Mentions: 2
Published: over 8 years ago
10.3389/fimmu.2014.00548
Type I Interferon Regulates the Expression of Long Non-Coding RNAs
Cited by: 52
Author(s): Elena Carnero, Marina Barriocanal, Víctor Segura, Elizabeth Guruceaga, Celia Prior, Kathleen Börner, Dirk Grimm, Puri Fortes
Software Mentions: 2
Published: about 10 years ago
10.3389/fnmol.2016.00015
Long Non-coding RNA in Neurons: New Players in Early Response to BDNF Stimulation
Cited by: 14
Author(s): Vincenza Aliperti, Aldo Donizetti
Software Mentions: 2
Published: over 8 years ago
10.1038/s42003-020-0864-x
NORFA, long intergenic noncoding RNA, maintains sow fertility by inhibiting granulosa cell death
Cited by: 31
Author(s): Xiaohong Du, Lu Liu, Qiqi Li, Lifan Zhang, Zengxiang Pan
Software Mentions: 2
Published: over 4 years ago
10.1186/s12864-019-5691-4
Comparative transcriptomic analysis of hypothalamus-pituitary-liver axis in bighead carp (Hypophthalmichthys nobilis) with differential growth rate
Cited by: 13
Author(s): Bishi Fu, Xin Yu, Jingou Tong, Maolin Pang, Ying Zhou, Qingshan Liu, Wenjing Tao
Software Mentions: 2
Published: over 5 years ago
10.1002/ctm2.211
TCONS_00012883 promotes proliferation and metastasis via DDX3/YY1/MMP1/PI3K‐AKT axis in colorectal cancer
Cited by: 38
Author(s): Peng Yang, Jie Li, Cong Peng, Yuqian Tan, Ranran Chen, Wen Peng, Qiou Gu, Jiahui Zhou, Lu Wang, Junwei Tang, Yifei Feng, Yueming Sun
Software Mentions: 2
Published: about 4 years ago
10.3389/fpls.2021.643182
Transcriptome Profile Analysis of Arabidopsis Reveals the Drought Stress-Induced Long Non-coding RNAs Associated With Photosynthesis, Chlorophyll Synthesis, Fatty Acid Synthesis and Degradation
Cited by: 6
Author(s): Kang Chen, Yang Huang, Chunni Liu, Liang Yu, Maoteng Li
Software Mentions: 2
Published: over 3 years ago
10.3389/fpubh.2018.00332
The Electronic Community Park Audit Tool (eCPAT): Exploring the Use of Mobile Technology for Youth Empowerment and Advocacy for Healthy Community Policy, Systems, and Environmental Change
Cited by: 11
Author(s): Gina M. Besenyi, Benjamin Schooley, Gabrielle Turner‐McGrievy, Sara Wilcox, Sonja A. Wilhelm Stanis, Andrew T. Kaczynski
Software Mentions: 2
Published: about 6 years ago
10.1111/cpr.12750
Long non‐coding RNA LOC100133669 promotes cell proliferation in oesophageal squamous cell carcinoma
Cited by: 12
Author(s): Zhuzhu Guan, Yali Wang, Yu Wang, Xiaoxu Liu, Yan Wang, Weimin Zhang, Xinming Chi, Dong Yan, Xuefeng Li, Shujuan Shao, Qimin Zhan
Software Mentions: 2
Published: over 4 years ago
10.1186/s12942-021-00289-7
Park environment and moderate-to-vigorous physical activity in parks among adolescents in a high-density city: the moderating role of neighbourhood income
Cited by: 5
Author(s): Ru Zhang, Chunqing Zhang, PC Lai, Wei Cheng, Benjamin Schüz, Mei‐Po Kwan
Software Mentions: 2
Published: over 3 years ago
10.3389/fvets.2021.672270
Transcriptome Analysis Revealed Potential Mechanisms of Resistance to Trichomoniasis gallinae Infection in Pigeon (Columba livia)
Cited by: 2
Author(s): Jiahui Yuan, Aixin Ni, Yunlei Li, Shixiong Bian, Yunjie Liu, Panlin Wang, Lei Shi, Adamu Mani Isa, Pingzhuang Ge, Yanyan Sun, Hui Ma, Jilan Chen
Software Mentions: 2
Published: about 3 years ago
10.1038/s41419-019-1585-2
Impaired autophagic degradation of lncRNA ARHGAP5-AS1 promotes chemoresistance in gastric cancer
Cited by: 117
Author(s): Liyuan Zhu, Yiran Zhu, Shuting Han, Miaoqin Chen, Ping Song, Dongjun Dai, Wenxia Xu, Tingting Jiang, Lifeng Feng, Vivian Y. Shin, Xian Wang, Hongchuan Jin
Software Mentions: 2
Published: over 5 years ago
10.1534/g3.118.201014
Identification and Expression Analysis of Long Noncoding RNAs in Fat-Tail of Sheep Breeds
Cited by: 28
Author(s): Mohammad Reza Bakhtiarizadeh, Seyed Alireza Salami
Software Mentions: 2
Published: over 5 years ago
10.1002/path.5195
Long non‐coding RNAs influence the transcriptome in pulmonary arterial hypertension: the role of<i>PAXIP1‐AS1</i>
Cited by: 40
Author(s): Katharina Jandl, Helene Thekkekara Puthenparampil, Leigh M. Marsh, Júlia Hoffmann, Jochen Wilhelm, Christine Veith, Katharina Sinn, Walter Klepetko, Horst Olschewski, Andrea Olschewski, Matthias Brock, Grażyna Kwapiszewska
Software Mentions: 2
Published: almost 6 years ago
10.3390/genes8120366
Current Research on Non-Coding Ribonucleic Acid (RNA)
Cited by: 46
Author(s): Jing Wang, David C. Samuels, Shilin Zhao, Xiang Yu, Zhao Yan, Yan Guo
Software Mentions: 2
Published: almost 7 years ago
10.3390/genes10020157
Pituitary Transcriptomic Study Reveals the Differential Regulation of lncRNAs and mRNAs Related to Prolificacy in Different FecB Genotyping Sheep
Cited by: 42
Author(s): Jian Zheng, Zhen Wang, Hua Yang, Xiaolei Yao, Pengcheng Yang, Caifang Ren, Zhen Wang, Yanli Zhang
Software Mentions: 2
Published: almost 6 years ago
10.1186/s13045-020-00852-y
Long non-coding RNA HUMT hypomethylation promotes lymphangiogenesis and metastasis via activating FOXK1 transcription in triple-negative breast cancer
Cited by: 58
Author(s): Shaoquan Zheng, Lu Yang, Yutian Zou, Jieying Liang, Peng Liu, Guanfeng Gao, Anli Yang, Hailin Tang, Xiaoming Xie
Software Mentions: 2
Published: over 4 years ago
10.1038/s41419-019-1344-4
LINC01939 inhibits the metastasis of gastric cancer by acting as a molecular sponge of miR-17-5p to regulate EGR2 expression
Cited by: 28
Author(s): Chen Mi, Ли Фан, Simin Zhang, Yong Li, Chen Peng, Xin Peng, Dongbo Liu, C Ma, Wenjie Zhang, Zhenwei Zou, Pin-Dong Li
Software Mentions: 2
Published: almost 6 years ago