cran: CCA | Projects | Ecosyste.ms: Papers

10.1523/ENEURO.0101-20.2020

Resolving the Connectome, Spectrally-Specific Functional Connectivity Networks and Their Distinct Contributions to Behavior
Cited by: 7
Author(s): Robert Becker, Alexis Hervais-Adelman
Software Mentions: 2
Published: over 4 years ago

10.1111/ahg.12065

On the Performance of Multiple Imputation Based on Chained Equations in Tackling Missing Data of the African α 3.7 ‐Globin Deletion in a Malaria Association Study
Cited by: 5
Author(s): Nuno Sepúlveda, Alphaxard Manjurano, Chris Drakeley, Taane G. Clark
Software Mentions: 2
Published: over 10 years ago

10.1186/1479-5876-7-20

MicroRNA and gene expression patterns in the differentiation of human embryonic stem cells
Cited by: 174
Author(s): Jiaqiang Ren, Ping Jin, Ena Wang, Francesco M. Marincola, David F. Stroncek
Software Mentions: 2
Published: over 15 years ago

10.1186/s12918-016-0312-1

Structured sparse CCA for brain imaging genetics via graph OSCAR
Cited by: 9
Author(s): Lei Du, Heng Huang, Jingwen Yan, Sungeun Kim, Shannon L. Risacher, Mark Inlow, Jason H. Moore, Andrew J. Saykin, Li Shen
Software Mentions: 2
Published: over 8 years ago

10.7554/eLife.66968

Mapping brain-behavior space relationships along the psychosis spectrum
Cited by: 14
Author(s): Jie Lisa Ji, Markus Helmer, Clara Fonteneau, Joshua B. Burt, Zailyn Tamayo, Jure Demšar, Brendan Adkinson, Aleksandar Savić, Katrin H. Preller, Flora Moujaes, Franz X. Vollenweider, William J. Martin, Grega Repovš, John D. Murray, Alan Antičević
Software Mentions: 2
Published: over 3 years ago

10.5334/ijic.2472

Performing Economic Evaluation of Integrated Care: Highway to Hell or Stairway to Heaven?
Cited by: 41
Author(s): Apostolos Tsiachristas, K. Viktoria Stein, Silvia M. A. A. Evers, Maureen M.P.M.H. Rutten van Mölken
Software Mentions: 2
Published: about 8 years ago

10.3390/ijerph16010001

Gcd Gene Diversity of Quinoprotein Glucose Dehydrogenase in the Sediment of Sancha Lake and Its Response to the Environment
Cited by: 45
Author(s): Li Yong, Jianqiang Zhang, Zhiliang Gong, Wangli Xu, Zishen Mou
Software Mentions: 2
Published: almost 6 years ago

10.1038/ismej.2016.153

Helminth burden and ecological factors associated with alterations in wild host gastrointestinal microbiota
Cited by: 29
Author(s): Lindsay K. Newbold, Sarah J. Burthe, Anna Oliver, Hyun S. Gweon, Christopher J. Barnes, Francis Daunt, Christopher J. van der Gast
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pbio.3000538

A single-cell atlas of adult Drosophila ovary identifies transcriptional programs and somatic cell lineage regulating oogenesis
Cited by: 71
Author(s): Allison Jevitt, Deeptiman Chatterjee, Gengqiang Xie, Xianfeng Wang, Taylor Otwell, Yi-Chun Huang, Wu-Min Deng
Software Mentions: 2
Published: over 4 years ago

10.1186/s12874-018-0547-1

Heckman imputation models for binary or continuous MNAR outcomes and MAR predictors
Cited by: 33
Author(s): Jacques‐Emmanuel Galimard, Sylvie Chevret, Emmanuel Curis, Matthieu Resche‐Rigon
Software Mentions: 2
Published: about 6 years ago

10.1155/2011/627947

Fast Random Permutation Tests Enable Objective Evaluation of Methods for Single-Subject fMRI Analysis
Cited by: 25
Author(s): Anders Eklund, Mats Andersson, Hans Knutsson
Software Mentions: 2
Published: almost 14 years ago

10.7717/peerj.3019

Key bacterial families (Clostridiaceae, Erysipelotrichaceae and Bacteroidaceae) are related to the digestion of protein and energy in dogs
Cited by: 117
Author(s): Emma N. Bermingham, Paul Maclean, David G. Thomas, Nick Cave, Wayne Young
Software Mentions: 2
Published: over 7 years ago

10.1186/s12874-020-00929-9

Comparison of exclusion, imputation and modelling of missing binary outcome data in frequentist network meta-analysis
Cited by: 3
Author(s): Loukia M. Spineli, Chrysostomos Kalyvas
Software Mentions: 2
Published: over 4 years ago

10.7717/peerj.7464

Communities of oil palm flower-visiting insects: investigating the covariation of <i>Elaeidobius kamerunicus</i> and other dominant species
Cited by: 8
Author(s): Akhmad Rizali, Bambang Tri Rahardjo, Sri Karindah, Fatma Ramadhani Wahyuningtyas, Nurindah Nurindah, Bandung Sahari, Yann Clough
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2105-10-34

Sparse canonical methods for biological data integration: application to a cross-platform study
Cited by: 223
Author(s): Kim Anh Lê Cao, Pascal G.P. Martin, Christèle Robert-Granié, Philippe Besse
Software Mentions: 2
Published: almost 16 years ago

10.3390/s19143214

A Novel Approach for Multi-Lead ECG Classification Using DL-CCANet and TL-CCANet
Cited by: 17
Author(s): Wei Yang, Yujuan Si, Di Wang, Gong Zhang
Software Mentions: 2
Published: over 5 years ago

10.1038/s41398-021-01490-9

Effects of eight neuropsychiatric copy number variants on human brain structure
Cited by: 15
Author(s): Claudia Modenato, Kuldeep Kumar, Clara Moreau, Sandra Martin‐Brevet, Guillaume Huguet, Catherine Schramm, Martineau Jean‐Louis, Charles-Olivier Martin, Nadine Younis, Petra Tamer, Élise Douard, Fanny Thébault‐Dagher, Valérie Côté, Audrey-Rose Charlebois, Florence Deguire, Anne Maillard, Borja Rodríguez-Herreros, Aurèlie Pain, Sonia Richetin, Marie‐Claude Addor, Joris Andrieux, Benoı̂t Arveiler, Geneviève Baujat, Frédérique Sloan‐Béna, Marco Belfiore, Dominique Bonneau, Sonia Bouquillon, Odile Boute, Alfredo Brusco, Tiffany Busa, Jean Hubert Caberg, Dominique Campion, Vanessa Colombert, Marie‐Pierre Cordier, Albert David, François-Guillaume Debray, Marie‐Ange Delrue, Martine Doco‐Fenzy, Ulrike Dunkhase-Heinl, Patrick Edery, Christina Fagerberg, Laurence Faivre, Francesca Forzano, David Geneviève, Marion Gérard, Daniela Giachino, Agnès Guichet, Olivier Guillin, Delphine Héron, Bertrand Isidor, Aurélia Jacquette, Sylvie Jaillard, Hubert Journel, Boris Keren, Didier Lacombe, Sébastien Lebon, Cédric Le Caignec, M. Lemaître, James Lespinasse, Michèle Mathieu-Dramart, Sandra Mercier, Cyril Mignot, Chantal Missirian, Florence Petit, Kristina Pilekær Sørensen, Lucile Pinson, Ghislaine Plessis, Fabienne Prieur, A Raymond, Caroline Rooryck-Thambo, Massimiliano Rossi, Damien Sanlaville, Britta Schlott Kristiansen, Caroline Schluth‐Bolard, Marianne Till, Mieke M. van Haelst, Lionel Van Maldergem, Hanalore Alupay, Benjamin Aaronson, Sean Ackerman, Katy Ankenman, Ayesha Anwar, Constance Atwell, Alexandra Bowe, Arthur L. Beaudet, Marta Benedetti, Jessica Berg, Jeffrey Berman, Leandra N. Berry, Audrey L. Bibb, Lisa Blaskey, Jonathan Brennan, Christie M. Brewton, Randy L. Buckner, Polina Bukshpun, Jordan Burko, Phil Cali, Bettina M. Cerban, Yi-Shin Chang, Maxwell Cheong, Vivian Chow, Zili Chu, Darina Chudnovskaya, Lauren Cornew, Corby L. Dale, John Dell, Allison G. Dempsey, Trent D. DesChamps, Rachel K. Earl, J. Christopher Edgar, Jenna Elgin, Jennifer Olson, Yolanda L. Evans, Anne Findlay, Gerald D. Fischbach, C. Joseph Fisk, Brieana Fregeau, Bill Gaetz, Leah Gaetz, Silvia Garza, Jennifer Gerdts, Orit A. Glenn, Sarah E. Gobuty, Rachel Golembski, Marion Greenup, Kory Heiken, Katherine Hines, Leighton B. Hinkley, Frank I. Jackson, J. P. Jenkins, Rita J. Jeremy, Kelly Johnson, Stephen M. Kanne, Sudha Kilaru Kessler, Sarah Y. Khan, Matthew Ku, Emily S. Kuschner, Anna L. Laakman, Peter Lam, Morgan W. Lasala, Hana Lee, Kevin LaGuerre, Susan E. Levy, Alyss Lian Cavanagh, Ashlie V. Llorens, Katherine L. Campe, Tracy Luks, Elysa J. Marco, S Martin, Alastair J. Martin, Gabriela Marzano, Christina Masson, Kathleen E. McGovern, Rebecca McNally Keehn, David T. Miller, Fiona K. Miller, Timothy J. Moss, Rebecca Murray, Srikantan S. Nagarajan, Kerri P. Nowell, Julia P. Owen, Andrea M. Paal, Alan Packer, Patricia Z. Page, Brianna M. Paul, Alana Peters, Danica Peterson, Annapurna Poduri, Nicholas J. Pojman, Ken Porche, Monica B. Proud, Saba Qasmieh, Melissa B. Ramocki, Beau Reilly, Timothy P. L. Roberts, Dennis Shaw, Tuhin Sinha, Bethanny Smith-Packard, Anne Gallagher, Vivek Swarnakar, Tony Thieu, Christina Triantafallou, Roger Vaughan, Mari Wakahiro, Arianne S. Wallace, Tracey Ward, Julia Wenegrat, Anne Wolken, Lester Melie‐García, Leila Kushan, Ana Isabel Silva, Marianne Bernadette van den Bree, David Linden, Michael John Owen, Jérémy Hall, Sarah Lippé, M. Mallar Chakravarty, Danilo Bzdok, Carrie E. Bearden, Bogdan Draganski, Sébastien Jacquemont
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-021-86425-6

Potential role of microbiome in Chronic Fatigue Syndrome/Myalgic Encephalomyelits (CFS/ME)
Cited by: 33
Author(s): Giuseppe Lupo, Gabriele Rocchetti, Luigi Lucini, Lorenzo Lorusso, Elena Manara, Matteo Bertelli, Edoardo Puglisi, Enrica Capelli
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0140703

A Comparison Study of Canonical Correlation Analysis Based Methods for Detecting Steady-State Visual Evoked Potentials
Cited by: 227
Author(s): Masaki Nakanishi, Yijun Wang, Yu-Te Wang, Tzyy-Ping Jung
Software Mentions: 2
Published: about 9 years ago

10.3390/s17122945

Pre-Scheduled and Self Organized Sleep-Scheduling Algorithms for Efficient K-Coverage in Wireless Sensor Networks
Cited by: 10
Author(s): Prasan Kumar Sahoo, Hiren Kumar Thakkar, I‐Shyan Hwang
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-020-69575-x

Multi-group analysis using generalized additive kernel canonical correlation analysis
Cited by: 3
Author(s): Eunseong Bae, Ji-Won Hur, Jin‐Young Kim, Jun Soo Kwon, Jong-Ho Lee, Sang Hun Lee, Chae Young Lim
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0122719

Food Webs in Relation to Variation in the Environment and Species Assemblage: A Multivariate Approach
Cited by: 13
Author(s): Tiffany A. Schriever
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-019-50607-0

Ecotoxicological hazard of a mixture of glyphosate and aminomethylphosphonic acid to the mussel Mytilus galloprovincialis (Lamarck 1819)
Cited by: 26
Author(s): Valerio Matozzo, Marco Munari, Laura Masiero, Livio Finos, María Gabriella Marin
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-69931-x

Nitrate as a potential prebiotic for the oral microbiome
Cited by: 60
Author(s): Bob T. Rosier, Elena Buetas, Eva M. Moya-Gonzálvez, Alejandro Artacho, Álex Mira
Software Mentions: 2
Published: over 4 years ago

10.3390/s18010020

An Event-Triggered Machine Learning Approach for Accelerometer-Based Fall Detection
Cited by: 52
Author(s): I Putu Edy Suardiyana Putra, James Brusey, Elena Gaura, Rein Vesilo
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0085990

Linking Geology and Microbiology: Inactive Pockmarks Affect Sediment Microbial Community Structure
Cited by: 13
Author(s): Thomas Haverkamp, Øyvind Hammer, Kjetill S. Jakobsen
Software Mentions: 2
Published: almost 11 years ago

10.1093/jn/nxy299

Strong Multivariate Relations Exist Among Milk, Oral, and Fecal Microbiomes in Mother-Infant Dyads During the First Six Months Postpartum
Cited by: 88
Author(s): Janet E. Williams, Janae M Carrothers, Kimberly A. Lackey, Nicola F Beatty, Sarah L Brooker, Haley K. Peterson, Katelyn M Steinkamp, Mara A York, Bahman Shafii, William J. Price, Mark A. McGuire, Michelle K. McGuire
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0243251

ANOVA-HD: Analysis of variance when both input and output layers are high-dimensional
Cited by: 2
Author(s): Gustavo de los Campos, Torsten Pook, Agustín González-Reymúndez, Henner Simianer, George I. Mias, Ana I. Vázquez
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.ppat.1007265

Exclusive dependence of IL-10Rα signalling on intestinal microbiota homeostasis and control of whipworm infection
Cited by: 20
Author(s): María A. Duque-Correa, Natasha A. Karp, Catherine McCarthy, Simon Forman, David Goulding, Geetha Sankaranarayanan, Timothy Jenkins, Adam J. Reid, Emma L. Cambridge, Carmen Ballesteros Reviriego, Sanger Mouse Genetics, Werner Müller, Cinzia Cantacessi, Gordon Dougan, Richard K. Grencis, Matthew Berriman
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13071-018-2700-4

Latent class analysis to evaluate performance of point-of-care CCA for low-intensity Schistosoma mansoni infections in Burundi
Cited by: 39
Author(s): Michelle N. Clements, Paul L. A. M. Corstjens, Sue Binder, Carl H. Campbell, Claudia J. de Dood, Alan Fenwick, Wendy Harrison, Donatien Kayugi, Charles H. King, Dieuwke Kornelis, Onésime Ndayishimiye, Giuseppina Ortu, Mariama S. Lamine, Antonio Zivieri, Daniel G. Colley, Govert J. van Dam
Software Mentions: 2
Published: over 6 years ago

10.3390/insects11010059

Vegetation Pattern Modulates Ground Arthropod Diversity in Semi-Arid Mediterranean Steppes
Cited by: 20
Author(s): Fernando Meloni, Berta F Civieta, Juan A. Zaragoza, María L. Moraza, Susana Bautista
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0114401

Differences in Gene Transcriptomic Pattern of Plasmodium falciparum in Children with Cerebral Malaria and Asymptomatic Carriers
Cited by: 25
Author(s): Talleh Almelli, Grégory Nuel, Emmanuel Bischoff, Agnès Aubouy, Mohamed Elati, Christian W. Wang, Marie‐Agnès Dillies, Jean‐Yves Coppée, Georges Nko Ayissi, Léonardo K. Basco, Christophe Rogier, Nicaise Tuikue Ndam, Philippe Deloron, Rachida Tahar
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0067245

Overview of the Distribution, Habitat Association and Impact of Exotic Ants on Native Ant Communities in New Caledonia
Cited by: 13
Author(s): Maïa Berman, Alan N. Andersen, Christelle Hély, Cédric Gaucherel
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0197225

Pioneer farming in southeast Europe during the early sixth millennium BC: Climate-related adaptations in the exploitation of plants and animals
Cited by: 41
Author(s): Maria Ivanova, Bea De Cupere, Jonathan Ethier, Elena Marinova
Software Mentions: 2
Published: over 6 years ago

10.3389/fvets.2020.570074

Characterization of Rumen Microbiota of Two Sheep Breeds Supplemented With Direct-Fed Lactic Acid Bacteria
Cited by: 15
Author(s): Sinalo Mani, Olayinka Ayobami Aiyegoro, Matthew Adekunle Adeleke
Software Mentions: 2
Published: almost 4 years ago

10.1002/hbm.25110

Clinically relevant connectivity features define three subtypes of Parkinson's disease patients
Cited by: 8
Author(s): Tao Guo, Xiaojun Guan, Cheng Zhou, Ting Gao, Jingjing Wu, Zhe Song, Min Xuan, Quanquan Gu, Peiyu Huang, Jiali Pu, Baorong Zhang, Feng Cui, Shunren Xia, Xiaojun Xu, Minming Zhang
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-017-06677-z

Effect of probiotics on the meat flavour and gut microbiota of chicken
Cited by: 90
Author(s): Yan Wang, Jing Sun, Huan Zhong, Nianzhen Li, Hengyong Xu, Qing Zhu, Yiping Liu
Software Mentions: 2
Published: over 7 years ago

10.3390/microorganisms9050896

The Impact of Pine Wood Nematode Infection on the Host Fungal Community
Cited by: 7
Author(s): Yi Liu, Zhao‐lei Qu, Bing Liu, Yang Ma, Jie Xu, Shen Wen-xiao, Hui Sun
Software Mentions: 2
Published: over 3 years ago

10.3389/fnins.2019.00642

Performing Sparse Regularization and Dimension Reduction Simultaneously in Multimodal Data Fusion
Cited by: 8
Author(s): Zhiguo Yang, Xiaowei Zhuang, Christopher Bird, Karthik Sreenivasan, Virendra Mishra, Sarah J. Banks, Dietmar Cordes, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-019-5433-7

Cluster analysis of replicated alternative polyadenylation data using canonical correlation analysis
Cited by: 0
Author(s): Michael Fraser, Yuqi Long, Guoli Ji, Yangfeng Su, Pengchao Ye, Hongjuan Fu, Xiaohui Wu
Software Mentions: 2
Published: almost 6 years ago

10.1186/1471-2105-13-112

Comprehensive data-driven analysis of the impact of chemoinformatic structure on the genome-wide biological response profiles of cancer cells to 1159 drugs
Cited by: 21
Author(s): Suleiman A. Khan, Ali Faisal, John Patrick Mpindi, Juuso Parkkinen, Tuomo Kalliokoski, Antti Poso, Olli Kallioniemi, Krister Wennerberg, Samuel Kaski
Software Mentions: 2
Published: over 12 years ago

10.3389/fphys.2015.00039

Dissection of the radical reactions linked to fetal hemoglobin reveals enhanced pseudoperoxidase activity
Cited by: 31
Author(s): Khuanpiroon Ratanasopa, Michael Brad Strader, Abdu I. Alayash, Leif Bülow
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmicb.2021.706683

Gut Microbiota Associated With Different Sea Lamprey (Petromyzon marinus) Life Stages
Cited by: 3
Author(s): Prince P. Mathai, Muruleedhara N. Byappanahalli, Nicholas S. Johnson, Michael J. Sadowsky
Software Mentions: 2
Published: about 3 years ago

10.1111/1751-7915.12342

Use of mulberry–soybean intercropping in salt–alkali soil impacts the diversity of the soil bacterial community
Cited by: 62
Author(s): Xin Li, Meiling Sun, Huihui Zhang, Nan Xu, Sun Guang-yu
Software Mentions: 2
Published: almost 9 years ago

10.3389/fmicb.2017.01456

A Systems Biology Approach Reveals Differences in the Dynamics of Colonization and Degradation of Grass vs. Hay by Rumen Microbes with Minor Effects of Vitamin E Supplementation
Cited by: 24
Author(s): Alejandro Belanche, C. J. Newbold, Wen Lin, Pauline Rees Stevens, Alison H. Kingston‐Smith
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0087836

Deciphering the Adjustment between Environment and Life History in Annuals: Lessons from a Geographically-Explicit Approach in Arabidopsis thaliana
Cited by: 53
Author(s): Esperanza Manzano-Piedras, Arnald Marcer, Carlos Alonso‐Blanco, F. Xavier Picó
Software Mentions: 2
Published: almost 11 years ago

10.3389/fmicb.2018.02082

Desiccation- and Saline-Tolerant Bacteria and Archaea in Kalahari Pan Sediments
Cited by: 33
Author(s): Steffi Genderjahn, Mashal Alawi, Kai Mangelsdorf, Fabian Horn, Dirk Wagner
Software Mentions: 2
Published: about 6 years ago

10.3389/fpls.2017.00874

Stand Structure and Substrate Diversity as Two Major Drivers for Bryophyte Distribution in a Temperate Montane Ecosystem
Cited by: 14
Author(s): Yun Chen, Shuai Niu, Peikun Li, Hongru Jia, Hailiang Wang, Ye Yongzhong, Zuoqiang Yuan
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-16647-0

The Relationship between Secondary Forest and Environmental Factors in the Southern Taihang Mountains
Cited by: 13
Author(s): Zhao Hui, Qirui Wang, Fan Wang, Guohua Song
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2020.565267

Relationship Between the Fatty Acid Profiles and Gut Bacterial Communities of the Chinese Mitten Crab (Eriocheir sinensis) From Ecologically Different Habitats
Cited by: 11
Author(s): Shengyan Su, Brian Pelekelo Munganga, Fukuan Du, Jie Yu, Jianlin Li, Fan Yu, Meiyao Wang, Xinjin He, Xinyuan Li, Raouf Bouzoualegh, Pao Xu, Yongkai Tang
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2021.647373

A New Ciboria sp. for Soil Mycoremediation and the Bacterial Contribution to the Depletion of Total Petroleum Hydrocarbons
Cited by: 10
Author(s): Simone Becarelli, Ilaria Chicca, Salvatore La China, G. Siracusa, A. Bardi, Maria Gullo, Giulio Petroni, David B. Levin, Simona Di Gregorio
Software Mentions: 2
Published: over 3 years ago

10.1186/s12864-019-6329-2

ManiNetCluster: a novel manifold learning approach to reveal the functional links between gene networks
Cited by: 22
Author(s): Nam D. Nguyen, Ian K. Blaby, Daifeng Wang
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0034861

MultiPhen: Joint Model of Multiple Phenotypes Can Increase Discovery in GWAS
Cited by: 327
Author(s): Paul F. O’Reilly, Clive Hoggart, Yotsawat Pomyen, Federico C. F. Calboli, Paul Elliott, Marjo‐Riitta Järvelin, Lachlan Coin
Software Mentions: 2
Published: over 12 years ago

10.3389/fmicb.2019.02409

Metagenomics Reveals Seasonal Functional Adaptation of the Gut Microbiome to Host Feeding and Fasting in the Chinese Alligator
Cited by: 27
Author(s): Keyi Tang, Zhenwei Wang, Qiu‐Hong Wan, Sheng‐Guo Fang
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2015.01168

Seasonal and spatial patterns of microbial diversity along a trophic gradient in the interconnected lakes of the Osterseen Lake District, Bavaria
Cited by: 48
Author(s): Katrin Zwirglmaier, Katharina Keiz, Marion Engel, Juergen Geist, Uta Raeder
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0190352

Zika virus infection modulates the bacterial diversity associated with Aedes aegypti as revealed by metagenomic analysis
Cited by: 38
Author(s): Luis Eduardo Martínez Villegas, Thaís Bonifácio Campolina, Nilton R. Barnabe, Alessandra S Orfanó, Bárbara Aparecida Chaves, Douglas E. Norris, Paulo Pimenta, Nágila Francinete Costa Secundino
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2019.02346

Cross-Regional View of Functional and Taxonomic Microbiota Composition in Obesity and Post-obesity Treatment Shows Country Specific Microbial Contribution
Cited by: 17
Author(s): Daniel A. Medina, Tianlu Li, Pamela Thomson, Alejandro Artacho, Vicente Pérez‐Brocal, Andrés Moya
Software Mentions: 2
Published: about 5 years ago

10.1002/ajb2.1431

Ecological niche differences between two polyploid cytotypes of <i>Saxifraga rosacea</i>
Cited by: 15
Author(s): Lucile Decanter, Guy Colling, Nora Elvinger, Starri Heiðmarsson, Diethart Matthies
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2013.00232

The power of regional heritability analysis for rare and common variant detection: simulations and application to eye biometrical traits
Cited by: 29
Author(s): Yoshinobu Uemoto, Ricardo Pong‐Wong, Pau Navarro, Véronique Vitart, Caroline Hayward, James F. Wilson, Igor Rudan, Harry Campbell, Nicholas D. Hastie, Alan F. Wright, Chris Haley
Software Mentions: 2
Published: almost 12 years ago

10.3389/fnhum.2019.00032

Formant Space Reconstruction From Brain Activity in Frontal and Temporal Regions Coding for Heard Vowels
Cited by: 1
Author(s): Alessandra Cecilia Rampinini, Giacomo Handjaras, Andrea Leo, Luca Cecchetti, Monica Betta, Giovanna Marotta, Emiliano Ricciardi, Pietro Pietrini
Software Mentions: 2
Published: almost 6 years ago

10.4269/ajtmh.16-0671

Countrywide Reassessment of Schistosoma mansoni Infection in Burundi Using a Urine-Circulating Cathodic Antigen Rapid Test: Informing the National Control Program
Cited by: 23
Author(s): Giuseppina Ortu, Onésime Ndayishimiye, Michelle N. Clements, Donatien Kayugi, Carl H. Campbell, Mariama S. Lamine, Antonio Zivieri, Ricardo J. Soares Magalhães, Sue Binder, Charles H. King, Alan Fenwick, Daniel G. Colley, P Jourdan
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0074584

Doping Control Using High and Ultra-High Resolution Mass Spectrometry Based Non-Targeted Metabolomics-A Case Study of Salbutamol and Budesonide Abuse
Cited by: 30
Author(s): Agnèta Kiss, Marianna Lucio, Aurélie Fildier, Corinne Buisson, Philippe Schmitt‐Kopplin, Cécile Cren-Olivé
Software Mentions: 2
Published: about 11 years ago

10.3389/fncom.2020.00055

Neurons as Canonical Correlation Analyzers
Cited by: 7
Author(s): Cengiz Pehlevan, Xinyuan Zhao, Anirvan M. Sengupta, Dmitri B. Chklovskii
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2017.00084

More Is Better: Recent Progress in Multi-Omics Data Integration Methods
Cited by: 482
Author(s): Sijia Huang, Kumardeep Chaudhary, Lana X. Garmire
Software Mentions: 2
Published: over 7 years ago

10.3389/fimmu.2018.02425

A Single-Cell Sequencing Guide for Immunologists
Cited by: 143
Author(s): Peter See, Josephine Lum, Jinmiao Chen, Florent Ginhoux
Software Mentions: 2
Published: about 6 years ago

10.1186/s12898-016-0094-8

Host plant range of a fruit fly community (Diptera: Tephritidae): does fruit composition influence larval performance?
Cited by: 43
Author(s): Abir Hafsi, Benoît Facon, Virginie Ravigné, Frédéric Chiroleu, Serge Quilici, Brahim Chermiti, Pierre François Duyck
Software Mentions: 2
Published: about 8 years ago

10.3389/fcell.2019.00175

Cross-Species Analysis of Single-Cell Transcriptomic Data
Cited by: 66
Author(s): Maxwell E.R. Shafer
Software Mentions: 2
Published: about 5 years ago

10.1186/2046-9063-10-11

Benthic infaunal community structuring in an acidified tropical estuarine system
Cited by: 15
Author(s): M. Belal Hossain, David J. Marshall
Software Mentions: 2
Published: almost 11 years ago

10.1002/ece3.2485

The contribution of nitrogen deposition to the eutrophication signal in understorey plant communities of European forests
Cited by: 36
Author(s): H.F. van Dobben, Wim de Vries
Software Mentions: 2
Published: almost 8 years ago

10.3389/fnins.2020.509364

Decoding Kinematic Information From Primary Motor Cortex Ensemble Activities Using a Deep Canonical Correlation Analysis
Cited by: 3
Author(s): Min-Ki Kim, Jung Woo Sohn, Sung-Phil Kim
Software Mentions: 2
Published: about 4 years ago

10.1002/ece3.6059

Should ecologists prefer model‐ over distance‐based multivariate methods?
Cited by: 18
Author(s): Jonathan F. Jupke, Ralf B. Schäfer
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcimb.2017.00405

Host Distribution Does Not Limit the Range of the Tick Ixodes ricinus but Impacts the Circulation of Transmitted Pathogens
Cited by: 22
Author(s): Agustı́n Estrada-Peña, José de la Fuente
Software Mentions: 2
Published: about 7 years ago

10.1007/s00284-014-0629-1

The Diversity of Bacteria Isolated from Antarctic Freshwater Reservoirs Possessing the Ability to Produce Polyhydroxyalkanoates
Cited by: 27
Author(s): Sławomir Ciesielski, Dorota Górniak, Justyna Możejko, Aleksander Świątecki, Jakub Grzesiak, Marek K. Zdanowski
Software Mentions: 2
Published: over 10 years ago

10.1038/s42003-021-02451-0

A single mode of population covariation associates brain networks structure and behavior and predicts individual subjects’ age
Cited by: 2
Author(s): Brent McPherson, Franco Pestilli
Software Mentions: 2
Published: over 3 years ago

10.3390/biom10101377

Omics-Based Platforms: Current Status and Potential Use for Cholangiocarcinoma
Cited by: 4
Author(s): Yu‐Chan Chang, Ming-Huang Chen, Chun‐Nan Yeh, Michael Hsiao
Software Mentions: 2
Published: about 4 years ago

10.3390/curroncol28020140

Oncology Clinicians’ Challenges to Providing Palliative Cancer Care—A Theoretical Domains Framework, Pan-Cancer System Survey
Cited by: 0
Author(s): Sharlette Dunn, Madelene A Earp, Patricia Biondo, Winson Y. Cheung, Marc Kerba, Patricia A. Tang, Aynharan Sinnarajah, Sharon Watanabe, Jessica Simon
Software Mentions: 2
Published: over 3 years ago

10.3390/cells10092439

Sexually Dimorphic Transcriptomic Changes of Developing Fetal Brain Reveal Signaling Pathways and Marker Genes of Brain Cells in Domestic Pigs
Cited by: 8
Author(s): Monica Strawn, J.G.N. Moraes, Timothy J. Safranski, Susanta K. Behura
Software Mentions: 2
Published: about 3 years ago

10.1002/cbic.201900470

Compactness of Protein Folds Alters Disulfide‐Bond Reducibility by Three Orders of Magnitude: A Comprehensive Kinetic Case Study on the Reduction of Differently Sized Tryptophan Cage Model Proteins
Cited by: 3
Author(s): Dániel Horváth, Nóra Taricska, Ernő Keszei, Pál Stráner, Viktor Farkas, Gábor Tóth, András Perczel
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0230356

Diversity in sea buckthorn (Hippophae rhamnoides L.) accessions with different origins based on morphological characteristics, oil traits, and microsatellite markers
Cited by: 16
Author(s): He Li, Chengjiang Ruan, Jian Ding, Li Jingbin, Li Wang, Xingjun Tian
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0033131

Multi-Scale Sampling to Evaluate Assemblage Dynamics in an Oceanic Marine Reserve
Cited by: 14
Author(s): Andrew R. Thompson, William Watson, Sam McClatchie, Edward D. Weber
Software Mentions: 2
Published: over 12 years ago

10.2147/CLEP.S314020

Current Practices in Missing Data Handling for Interrupted Time Series Studies Performed on Individual-Level Data: A Scoping Review in Health Research
Cited by: 0
Author(s): Juan Carlos Bazo‐Alvarez, Tim P Morris, James Carpenter, Inge Petersen
Software Mentions: 2
Published: over 3 years ago

10.3389/fcimb.2021.692883

A Single Dose of Nitrate Increases Resilience Against Acidification Derived From Sugar Fermentation by the Oral Microbiome
Cited by: 11
Author(s): Bob T. Rosier, Carlos Palazón, Sandra García‐Esteban, Alejandro Artacho, Antonio Galiana, Álex Mira
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0123237

Temperate Snake Community in South America: Is Diet Determined by Phylogeny or Ecology?
Cited by: 17
Author(s): Gisela Paola Bellini, Alejandro R. Giraudo, Vanesa Arzamendia, Eduardo Gabriel Etchepare
Software Mentions: 1
Published: over 9 years ago

10.1155/2019/4506876

Prediction of MicroRNA and Gene Target in Synovium-Associated Pain of Knee Osteoarthritis Based on Canonical Correlation Analysis
Cited by: 5
Author(s): Haiming Wang, Yue Hu, Yujie Xie, Li Wang, Jianxiong Wang, Lei Lei, Maomao Huang, Chi Zhang
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0080992

Post-Weaning Diet Affects Faecal Microbial Composition but Not Selected Adipose Gene Expression in the Cat (Felis catus)
Cited by: 16
Author(s): Emma N. Bermingham, Sandra Kittelmann, Wayne Young, Katherine R. Kerr, Kelly S. Swanson, Nicole C. Roy, David G. Thomas
Software Mentions: 1
Published: almost 11 years ago

10.1155/2018/9796238

Portable Brain-Computer Interface for the Intensive Care Unit Patient Communication Using Subject-Dependent SSVEP Identification
Cited by: 16
Author(s): Omid Dehzangi, Muhamed Farooq
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pntd.0004894

Evaluation of a Urine Pooling Strategy for the Rapid and Cost-Efficient Prevalence Classification of Schistosomiasis
Cited by: 12
Author(s): Nathan Lo, Jean T. Coulibaly, Eran Bendavid, Eliézer K. N’Goran, Jürg Utzinger, Jennifer Keiser, Isaac I. Bogoch, Jason R Andrews
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pntd.0006102

Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard
Cited by: 16
Author(s): Michelle N. Clements, Christl A. Donnelly, Alan Fenwick, Narcis B. Kabatereine, Sarah C. L. Knowles, Aboulaye Meïté, Eliézer K. N’Goran, Yolisa Nalule, Sarah Nogaro, Anna E. Phillips, Edridah M. Tukahebwa, Fiona Fleming
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12938-018-0583-4

A method of inferring the relationship between Biomedical entities through correlation analysis on text
Cited by: 3
Author(s): Hye-Jeong Song, Byeong-Hun Yoon, Young-Shin Youn, Chan-Young Park, Jong-Dae Kim, Yu-Seop Kim
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pntd.0001758

Evaluation of Circulating Cathodic Antigen (CCA) Urine-Tests for Diagnosis of Schistosoma mansoni Infection in Cameroon
Cited by: 88
Author(s): Louis-Albert Tchuem Tchuenté, C. J. K. Fouodo, Romuald Isaka Kamwa Ngassam, Laurentine Sumo, Calvine Dongmo Noumedem, Christian Mérimé Kenfack, Nestor Feussom Gipwe, Esther Dankoni Nana, J. Russell Stothard, David Rollinson
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pntd.0007617

The prevalence of schistosomiasis in Uganda: A nationally representative population estimate to inform control programs and water and sanitation interventions
Cited by: 33
Author(s): Natalie G. Exum, Simon P. S. Kibira, Ronald Ssenyonga, Julien Nobili, Alexandra K. Shannon, John C. Ssempebwa, Edridah M. Tukahebwa, Scott Radloff, Kellogg J. Schwab, Fredrick Makumbi
Software Mentions: 1
Published: over 5 years ago

10.1186/s12938-018-0573-6

Comparison of named entity recognition methodologies in biomedical documents
Cited by: 35
Author(s): Hye-Jeong Song, Byeong-Cheol Jo, Chan-Young Park, Jong-Dae Kim, Yu-Seop Kim
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2105-11-191

Integrative analysis of gene expression and copy number alterations using canonical correlation analysis
Cited by: 55
Author(s): Charlotte Soneson, Henrik Lilljebjörn, Thoas Fioretos, Magnus Fontes
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pntd.0003139

Sensitivity and Specificity of Multiple Kato-Katz Thick Smears and a Circulating Cathodic Antigen Test for Schistosoma mansoni Diagnosis Pre- and Post-repeated-Praziquantel Treatment
Cited by: 121
Author(s): Poppy H. L. Lamberton, Narcis B. Kabatereine, David Oguttu, Alan Fenwick, Joanne P. Webster
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pntd.0004357

Evaluation of the CCA Immuno-Chromatographic Test to Diagnose Schistosoma mansoni in Minas Gerais State, Brazil
Cited by: 18
Author(s): Alda Maria Soares Silveira, Emanuele Gama Dutra Costa, Debalina Ray, Brian M. Suzuki, Michael H. Hsieh, Lúcia Alves de Oliveira Fraga, Conor R. Caffrey
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pntd.0001917

Efficacy and Safety of Praziquantel in Preschool-Aged Children in an Area Co-Endemic for Schistosoma mansoni and S. haematobium
Cited by: 72
Author(s): Jean T. Coulibaly, Yve K. N'Gbesso, Stefanie Knopp, Jennifer Keiser, Eliézer K. N’Goran, Jürg Utzinger
Software Mentions: 1
Published: almost 12 years ago

10.1371/currents.dis.7bfa59d37f7f59abc238462d53fbb41f

Integrating Climate Change Adaptation into Disaster Risk Reduction in Urban Contexts: Perceptions and Practice
Cited by: 7
Author(s): Claudia Rivera
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pcbi.1003402

A Latent Markov Modelling Approach to the Evaluation of Circulating Cathodic Antigen Strips for Schistosomiasis Diagnosis Pre- and Post-Praziquantel Treatment in Uganda
Cited by: 28
Author(s): Artemis Koukounari, Christl A. Donnelly, Irini Moustaki, Edridah M. Tukahebwa, Narcis B. Kabatereine, Shona Wilson, Joanne P. Webster, André M. Deelder, Birgitte J. Vennervald, Govert J. van Dam
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pcbi.1005788

A quadratically regularized functional canonical correlation analysis for identifying the global structure of pleiotropy with NGS data
Cited by: 5
Author(s): Nan Lin, Yun Zhu, Ruzong Fan, Momiao Xiong
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pcbi.1003876

Canonical Correlation Analysis for Gene-Based Pleiotropy Discovery
Cited by: 26
Author(s): José A. Seoane, Colin Campbell, Ian N.M. Day, Juan P. Casas, Tom R. Gaunt
Software Mentions: 1
Published: about 10 years ago

Projects: cran: CCA

Papers Mentioning CCA 449