cran: BIOMASS | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0206077

Demographic characteristics of an avian predator, Louisiana Waterthrush (Parkesia motacilla), in response to its aquatic prey in a Central Appalachian USA watershed impacted by shale gas development
Cited by: 6
Author(s): Mack W. Frantz, Petra Bohall Wood, George T. Merovich
Software Mentions: 8
Published: almost 6 years ago

10.1371/journal.pcbi.1006644

A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types
Cited by: 35
Author(s): Yara Seif, Jonathan M. Monk, Nathan Mih, Hannah Tsunemoto, Saugat Poudel, Cristal Zuñiga, Jared T. Broddrick, Karsten Zengler, Jaehyung Kim
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pcbi.1004732

PSAMM: A Portable System for the Analysis of Metabolic Models
Cited by: 35
Author(s): Jon Lund Steffensen, Keith Dufault‐Thompson, Ying Zhang
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-020-61868-5

Climatic and edaphic controls over tropical forest diversity and vegetation carbon storage
Cited by: 49
Author(s): Florian Hofhansl, Eduardo Chacón‐Madrigal, Lucia Fuchslueger, Daniel Jenking, Albert Morera-Beita, Christoph Plutzar, Fernando Silla, Kelly M. Andersen, David M. Buchs, Stefan Dullinger, Konrad Fiedler, Oskar Franklin, Peter Hietz, Werner Huber, Carlos Alberto Quesada, Anja Rammig, Franziska Schrodt, Andrea G. Vincent, Anton Weissenhofer, Wolfgang Wanek
Software Mentions: 5
Published: over 4 years ago

10.7717/peerj.8486

Patterns of biodiversity response along a gradient of forest use in Eastern Amazonia, Brazil
Cited by: 7
Author(s): Sérgio Milheiras, Marcelino Carneiro Guedes, Fernando A. B. Silva, Perseu Silva Aparicio, Georgina M. Mace
Software Mentions: 4
Published: almost 5 years ago

10.1098/rspb.2020.1070

Phylogenetic and functional distinctiveness explain alien plant population responses to competition
Cited by: 10
Author(s): Sam Levin, Raelene M. Crandall, Tyler Pokoski, Cláudia Stein, Tiffany M. Knight
Software Mentions: 4
Published: over 4 years ago

10.1186/1752-0509-7-129

MC3: a steady-state model and constraint consistency checker for biochemical networks
Cited by: 11
Author(s): Mona Yousofshahi, Ehsan Ullah, Russell Stern, Soha Hassoun
Software Mentions: 3
Published: almost 11 years ago

10.1371/journal.pone.0199488

Farmers’ preferred tree species and their potential carbon stocks in southern Burkina Faso: Implications for biocarbon initiatives
Cited by: 17
Author(s): Kangbéni Dimobe, Jérôme E. Tondoh, John C. Weber, Jules Bayala, Korotimi Ouédraogo, Karen Marie Greenough
Software Mentions: 3
Published: almost 6 years ago

10.3390/ijerph15030468

Wetlands and Malaria in the Amazon: Guidelines for the Use of Synthetic Aperture Radar Remote-Sensing
Cited by: 19
Author(s): Thibault Catry, Zhichao Li, Emmanuel Roux, Vincent Herbreteau, Helen Gurgel, Morgan Mangeas, Frédérique Seyler, Nadine Dessay
Software Mentions: 2
Published: over 6 years ago

10.1186/s13021-015-0023-8

Monitoring forest carbon in a Tanzanian woodland using interferometric SAR: a novel methodology for REDD+
Cited by: 19
Author(s): Svein Solberg, Belachew Gizachew, Erik Næsset, Terje Gobakken, Ernest William Mauya, Håkan Olsson, R. E. Malimbwi, Eliakimu Zahabu
Software Mentions: 2
Published: over 9 years ago

10.1186/s13021-018-0093-5

Estimation of forest aboveground biomass and uncertainties by integration of field measurements, airborne LiDAR, and SAR and optical satellite data in Mexico
Cited by: 75
Author(s): Mikhail Urbazaev, Christian Thiel, Felix Cremer, Ralph Dubayah, Mirco Migliavacca, Markus Reichstein, Christiane Schmullius
Software Mentions: 2
Published: over 6 years ago

10.1186/s13021-014-0005-2

Forest biomass change estimated from height change in interferometric SAR height models
Cited by: 46
Author(s): Svein Solberg, Erik Næsset, Terje Gobakken
Software Mentions: 2
Published: about 10 years ago

10.1186/s12936-016-1473-5

Markov chain Monte Carlo and expectation maximization approaches for estimation of haplotype frequencies for multiply infected human blood samples
Cited by: 8
Author(s): Gie Ken‐Dror, Ian M. Hastings
Software Mentions: 2
Published: about 8 years ago

10.1186/s12934-019-1243-5

Redesigning the Aspergillus nidulans xylanase regulatory pathway to enhance cellulase production with xylose as the carbon and inducer source
Cited by: 4
Author(s): P. Ballmann, Jorge D. Lightfoot, Majon Muller, Stefan Dröge, Rolf A. Prade
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.1007533

A systematic evaluation of Mycobacterium tuberculosis Genome-Scale Metabolic Networks
Cited by: 15
Author(s): Víctor A. López-Agudelo, Tom A. Mendum, Emma Laing, Huihai Wu, Andrés Baena, Luis F. Barrera, Dany J. V. Beste, Rigoberto Ríos‐Estepa
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pntd.0007871

GSMN-ML- a genome scale metabolic network reconstruction of the obligate human pathogen Mycobacterium leprae
Cited by: 8
Author(s): Khushboo Borah, Jacque-Lucca Kearney, Ruma Banerjee, Pankaj Vats, Huihai Wu, Sonal Dahale, Sunitha Manjari Kasibhatla, Rajendra Joshi, Bhushan Bonde, Olabisi Ojo, Ramanuj Lahiri, Diana L. Williams, Johnjoe McFadden
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0143960

A Mixed-Method Approach for Quantifying Illegal Fishing and Its Impact on an Endangered Fish Species
Cited by: 20
Author(s): Christopher M. Free, Olaf P. Jensen, Bud Mendsaikhan
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.ppat.1003984

ChIP-Seq and RNA-Seq Reveal an AmrZ-Mediated Mechanism for Cyclic di-GMP Synthesis and Biofilm Development by Pseudomonas aeruginosa
Cited by: 135
Author(s): Chris J. Jones, David E. Newsom, Benjamin J. Kelly, Yasuhiko Irie, Laura K. Jennings, Binjie Xu, Dominique H. Limoli, Joe J. Harrison, Matthew R. Parsek, Peter White, Daniel J. Wozniak
Software Mentions: 2
Published: over 10 years ago

10.3390/s17102371

Comparing RIEGL RiCOPTER UAV LiDAR Derived Canopy Height and DBH with Terrestrial LiDAR
Cited by: 149
Author(s): Benjamin Brede, Alvaro Lau, Harm Bartholomeus, Lammert Kooistra
Software Mentions: 1
Published: about 7 years ago

10.1007/s10712-019-09538-8

The Importance of Consistent Global Forest Aboveground Biomass Product Validation
Cited by: 90
Author(s): Laura Duncanson, John Armston, Mathias Disney, Valerio Avitabile, Nicolas Barbier, Kim Calders, S. Carter, Jérôme Chave, Martin Herold, Thomas W. Crowther, Michael J. Falkowski, James R. Kellner, Nicolas Labrière, Richard Lucas, Natasha MacBean, Ronald E. McRoberts, Victoria Meyer, Erik Næsset, Jaime Nickeson, Keryn I. Paul, Oliver L. Phillips, Maxime Réjou‐Méchain, M. O. Román, Stephen H. Roxburgh, Sassan Saatchi, Dmitry Schepaschenko, Klaus Scipal, Paul Siqueira, Amanda Whitehurst, Mathew Williams
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pntd.0008299

The relationship between clinics and the venom of the causative Amazon pit viper (Bothrops atrox)
Cited by: 11
Author(s): Ana Maria Moura-da-Silva, Jorge Carlos Contreras-Bernal, Sarah Natalie Cirilo Gimenes, Luciana Aparecida Freitas-de-Sousa, José Antônio Portes-Junior, Pedro S. Peixoto, Leo Kei Iwai, Valéria Mourão de Moura, Pedro Ferreira Bisneto, Marcus Vinícius Guimarães Lacerda, Iran Mendonça da Silva, Luíz Carlos de Lima Ferreira, Sâmella Silva de Oliveira, Fan Hui Wen, Jacqueline de Almeida Gonçalves Sachett, Wuelton Marcelo Monteiro
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0199121

Genome-wide association mapping in bread wheat subjected to independent and combined high temperature and drought stress
Cited by: 54
Author(s): Mirza Faisal Qaseem, Rahmatullah Qureshi, Quddoos H. Muqaddasi, Hamayun Shaheen, Rehana Kousar, Marion S. Röder
Software Mentions: 1
Published: over 6 years ago

10.1186/s13021-016-0066-5

Attribution of net carbon change by disturbance type across forest lands of the conterminous United States
Cited by: 50
Author(s): Nancy L. Harris, Stephen Hagen, Sassan Saatchi, T. Pearson, Christopher W. Woodall, Grant M. Domke, B. H. Braswell, Brian F. Walters, Sandra Brown, William Salas, Alexander Fore, Yifan Yu
Software Mentions: 1
Published: almost 8 years ago

10.1128/mBio.00864-17

Psl Produced by Mucoid <i>Pseudomonas aeruginosa</i> Contributes to the Establishment of Biofilms and Immune Evasion
Cited by: 78
Author(s): Chris J. Jones, Daniel J. Wozniak
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0179152

The importance of data quality for generating reliable distribution models for rare, elusive, and cryptic species
Cited by: 53
Author(s): Keith B. Aubry, Catherine M. Raley, Kevin S. McKelvey
Software Mentions: 1
Published: over 7 years ago

10.1186/s13021-017-0086-9

Implications of allometric model selection for county-level biomass mapping
Cited by: 30
Author(s): Laura Duncanson, Wenli Huang, Kristofer D. Johnson, A. Swatantran, Ronald E. McRoberts, Ralph Dubayah
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0033927

A Macroecological Analysis of SERA Derived Forest Heights and Implications for Forest Volume Remote Sensing
Cited by: 3
Author(s): Matthew Brolly, Iain Woodhouse, Karl J. Niklas, Sean T. Hammond
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0010960

Shearwater Foraging in the Southern Ocean: The Roles of Prey Availability and Winds
Cited by: 57
Author(s): Ben Raymond, Scott A. Shaffer, Serguei Sokolov, Eric J. Woehler, Daniel P. Costa, Luke D. Einoder, Mark A. Hindell, Graham W. Hosie, Matt Pinkerton, Paul M. Sagar, Darren Scott, Adam N. H. Smith, David R. Thompson, Caitlin Vertigan, Henri Weimerskirch
Software Mentions: 1
Published: over 14 years ago

10.1186/s40694-020-00106-z

Recent advances in the intellectual property landscape of filamentous fungi
Cited by: 18
Author(s): Silvia Hüttner, Anton Johansson, Paulo Gonçalves Teixeira, Puck Achterberg, Ramkumar B. Nair
Software Mentions: 1
Published: about 4 years ago

10.1186/1752-0509-2-85

Iterative reconstruction of a global metabolic model of Acinetobacter baylyi ADP1 using high-throughput growth phenotype and gene essentiality data
Cited by: 75
Author(s): Maxime Durot, François Le Fèvre, Véronique de Berardinis, Annett Kreimeyer, David Vallenet, Cyril Combe, Serge Smidtas, Marcel Salanoubat, Jean Weissenbach, Vincent Schächter
Software Mentions: 1
Published: about 16 years ago

10.1186/s13021-019-0117-9

Forest degradation and biomass loss along the Chocó region of Colombia
Cited by: 22
Author(s): Victoria Meyer, Sassan Saatchi, António Ferraz, Liang Xu, Álvaro Duque, Mariano Garcı́a, Jérôme Chave
Software Mentions: 1
Published: over 5 years ago

10.1073/pnas.2003169118

Resistance of African tropical forests to an extreme climate anomaly
Cited by: 29
Author(s): Amy C. Bennett, Greta C. Dargie, Aida Cuni‐Sanchez, John Tshibamba Mukendi, Wannes Hubau, Jacques Mukinzi, Oliver L. Phillips, Yadvinder Malhi, Martin J. P. Sullivan, Declan L. M. Cooper, Stephen Adu‐Bredu, Kofi Affum‐Baffoe, Christian Amani, Lindsay F. Banin, Hans Beeckman, Serge K. Begne, Yannick E. Bocko, Pascal Boeckx, Jan Bogaert, Terry Brncic, Éric Chézeaux, Connie J. Clark, Armandu K. Daniels, Thalès de Haulleville, Marie‐Noël Djuikouo Kamdem, Jean‐Louis Doucet, Fidèle Evouna Ondo, Corneille E. N. Ewango, Ted R. Feldpausch, Ernest G. Foli, Christelle Gonmadje, Jefferson S. Hall, Olivier J. Hardy, David J. Harris, Suspense Averti Ifo, Kathryn J. Jeffery, Elizabeth Kearsley, Miguel Leal, Aurora Levesley, Jean‐Remy Makana, Faustin Mbayu Lukasu, Vincent P. Medjibe, Vianet Mihindu, Sam Moore, Natacha Nssi Begone, Georgia Pickavance, John R. Poulsen, J. Reitsma, Bonaventure Sonké, Terry Sunderland, Hermann Taedoumg, Joey Talbot, Darlington Tuagben, Peter M. Umunay, Hans Verbeeck, Jason Vleminckx, Lee White, Hannsjoerg Woell, John Woods, Lise Zemagho, Simon L. Lewis
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-017-03469-3

Understanding ‘saturation’ of radar signals over forests
Cited by: 54
Author(s): N. V. Joshi, Edward T. A. Mitchard, Matthew Brolly, Johannes Schumacher, Alfredo Fernández-Landa, Vivian Kvist Johannsen, Miguel Marchamalo, Rasmus Fensholt
Software Mentions: 1
Published: over 7 years ago

10.1186/s13021-020-00147-2

The impact of long dry periods on the aboveground biomass in a tropical forest: 20 years of monitoring
Cited by: 11
Author(s): Milton Serpa de Meira, José Roberto Rodrigues Pinto, Natalie Ramos, Éder Pereira Miguel, Ricardo de Oliveira Gaspar, Oliver L. Phillips
Software Mentions: 1
Published: over 4 years ago

10.1186/1750-0680-6-7

Mapping biomass with remote sensing: a comparison of methods for the case study of Uganda
Cited by: 61
Author(s): Valerio Avitabile, Martin Herold, Matieu Henry, Christiane Schmullius
Software Mentions: 1
Published: about 13 years ago

10.1038/s41598-021-84772-y

Spent coffee ground characterization, pelletization test and emissions assessment in the combustion process
Cited by: 38
Author(s): Andrea Colantoni, Enrico Paris, Leonardo Bianchini, Serena Ferri, Vera Marcantonio, M. Carnevale, Adriano Palma, V. Civitarese, Francesco Gallucci
Software Mentions: 1
Published: over 3 years ago

10.1186/1750-0680-4-8

Satellite-based terrestrial production efficiency modeling
Cited by: 70
Author(s): Ian McCallum, Wolfgang Wagner, Christiane Schmullius, А. Shvidenko, Michael Obersteiner, Steffen Fritz, S. Nilsson
Software Mentions: 1
Published: about 15 years ago

10.1186/s13021-015-0039-0

A framework for estimating forest disturbance intensity from successive remotely sensed biomass maps: moving beyond average biomass loss estimates
Cited by: 4
Author(s): Timothy Hill, Casey M. Ryan, Mathew Williams
Software Mentions: 1
Published: almost 9 years ago

10.1186/s13021-017-0078-9

Current remote sensing approaches to monitoring forest degradation in support of countries measurement, reporting and verification (MRV) systems for REDD+
Cited by: 167
Author(s): A. R. Mitchell, Åke Rosenqvist, B. Mora
Software Mentions: 1
Published: over 7 years ago

Projects: cran: BIOMASS

Papers Mentioning BIOMASS 40