Projects: cran: Andromeda
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/Andromeda
Asynchronous Disk-Based Representation of Massive Data
10 versions
Latest release: over 3 years ago
3 dependent packages
1,891 downloads last month
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Educational Contributors:
msuchard@ucla.edu
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Observational Health Data Sciences and Informatics (organization)
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Science Score: 85/100
Starting Score: 100 points
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+20
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+15
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Repository owned by research institution
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Very Likely Science (85)
Papers Mentioning Andromeda 1,724
10.1016/j.redox.2020.101597
Bioenergetic shift and actin cytoskeleton remodelling as acute vascular adaptive mechanisms to angiotensin II in murine retina and ophthalmic arteryCited by: 15
Author(s): Natarajan Perumal, Lars Straßburger, David P. Herzog, Marianne B. Müller, Norbert Pfeiffer, Franz H. Grus, Caroline Manicam
Software Mentions: 1
Published: about 6 years ago
10.1186/s12931-016-0362-3
Identification of vitamin D sensitive pathways during lung developmentCited by: 36
Author(s): Ling Chen, Richard Wilson, Ellen Bennett, Graeme R. Zosky
Software Mentions: 1
Published: over 10 years ago
10.1016/j.xpro.2020.100022
Assessing Budding Yeast Phosphoproteome Dynamics in a Time-Resolved Manner using TMT10plex Mass Tag LabelingCited by: 6
Author(s): Andrew W. Jones, Helen Flynn, Frank Uhlmann, Ambrosius P. Snijders, Sandra A. Touati
Software Mentions: 1
Published: over 6 years ago
10.1016/j.xpro.2021.100462
Purification and quantitative proteomic analysis of cell bodies and protrusionsCited by: 0
Author(s): Maria Dermit, Faraz K. Mardakheh
Software Mentions: 1
Published: over 5 years ago
10.1016/j.xpro.2021.100682
A protocol for analyzing the protein terminome of human cancer cell line culture supernatantsCited by: 2
Author(s): Kazuya Tsumagari, Chih‐Hsiang Chang, Yasushi Ishihama
Software Mentions: 1
Published: about 5 years ago
10.1126/sciadv.1701016
Ligand binding to a G protein–coupled receptor captured in a mass spectrometerCited by: 47
Author(s): Hsin‐Yung Yen, Jonathan T. S. Hopper, Idlir Liko, Timothy M. Allison, Yun Zhu, Dejian Wang, Monika Stegmann, Shabaz Mohammed, Beili Wu, Carol V. Robinson
Software Mentions: 1
Published: over 9 years ago
10.1126/sciadv.aay6804
A conserved ATP- and Scc2/4-dependent activity for cohesin in tethering DNA moleculesCited by: 35
Author(s): Pilar Gutiérrez-Escribano, Matthew D. Newton, Aida Llauró, Jonas Huber, Loredana Tanasie, Joseph Davy, Isabel Aly, Ricardo Aramayo, Alex Montoya, Holger Kramer, Johannes Stigler, David Rueda, Luís Aragón
Software Mentions: 1
Published: almost 7 years ago
10.1038/sdata.2015.47
The proteome of mouse vestibular hair bundles over developmentCited by: 34
Author(s): Jocelyn F. Krey, Nicholas E. Sherman, Erin Jeffery, Dongseok Choi, Peter G. Barr-Gillespie
Software Mentions: 1
Published: almost 11 years ago
10.1038/sdata.2018.31
Quantitative mapping of RNA-mediated nuclear estrogen receptor β interactome in human breast cancer cellsCited by: 22
Author(s): Giorgio Giurato, Giovanni Nassa, Annamaria Salvati, Elena Alexandrova, Francesca Rizzo, Tuula A. Nyman, Alessandro Weisz, Roberta Tarallo
Software Mentions: 1
Published: over 8 years ago
10.1038/sdata.2018.128
Mass spectrometry quantitation of proteins from small pools of developing auditory and vestibular cellsCited by: 16
Author(s): Jocelyn F. Krey, Déborah I. Scheffer, Dongseok Choi, Ashok P. Reddy, Larry L. David, David P. Corey, Peter G. Barr-Gillespie
Software Mentions: 1
Published: about 8 years ago
10.1038/s41597-019-0166-7
A dataset describing a suite of novel antibody reagents for the RAS signaling networkCited by: 4
Author(s): Regine M. Schoenherr, Dongqing Huang, Uliana J. Voytovich, Richard G. Ivey, Jacob J. Kennedy, Richard G. Saul, Simona Colantonio, Rhonda R. Roberts, Joseph G. Knotts, Jan Kaczmarczyk, Candice Perry, Stephen M. Hewitt, William Bocik, Gordon Whiteley, Tara Hiltke, Emily S. Boja, Henry Rodriguez, Jeffrey R. Whiteaker, Amanda G. Paulovich
Software Mentions: 1
Published: about 7 years ago
10.1038/s41597-019-0179-2
The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nucleiCited by: 13
Author(s): Giovanni Nassa, Giorgio Giurato, Annamaria Salvati, Valerio Gigantino, Giovanni Pecoraro, Jessica Lamberti, Francesca Rizzo, Tuula A. Nyman, Roberta Tarallo, Alessandro Weisz
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41597-020-00678-w
Proteomic and transcriptomic profiling of aerial organ development in ArabidopsisCited by: 18
Author(s): Julia Mergner, Martin Frejno, Maxim Messerer, Daniel Lang, Patroklos Samaras, Mathias Wilhelm, Klaus Mayer, Claus Schwechheimer, Bernhard Küster
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41597-021-00884-0
Triple SILAC identified progestin-independent and dependent PRA and PRB interacting partners in breast cancerCited by: 3
Author(s): Prangwan Pateetin, György Hutvágner, Sarah Bajan, Matthew P. Padula, Eileen McGowan, Viroj Boonyaratanakornkit
Software Mentions: 1
Published: over 5 years ago
10.1038/srep09520
Suberoylanilide Hydroxamic Acid Treatment Reveals Crosstalks among Proteome, Ubiquitylome and Acetylome in Non-Small Cell Lung Cancer A549 Cell LineCited by: 68
Author(s): Qiulian Wu, Zhongyi Cheng, Jun Zhu, Xu Wang, Xiaojun Peng, Chuangbin Chen, Wenting Li, Fengsong Wang, Lejie Cao, Xingling Yi, Zhiwei Wu, Jing Li, Pingsheng Fan
Software Mentions: 1
Published: over 11 years ago
10.1038/srep12668
Establishment of a new OSCC cell line derived from OLK and identification of malignant transformation-related proteins by differential proteomics approachCited by: 17
Author(s): Dong Yan, Qun Zhao, Xiaoyan Ma, Guowu Ma, Caiyun Liu, Zhuwen Chen, Liyuan Yu, Xuefeng Li, Yanguang Zhang, Shujuan Shao, Jing Xiao, Jia Li, Weimin Zhang, Ming Fu, Lei Dong, X Yang, Xu Guo, Liyan Xue, Fei Fang, Qimin Zhan, Lihua Zhang
Software Mentions: 1
Published: about 11 years ago
10.1038/srep16269
Substrates of the ASB2α E3 ubiquitin ligase in dendritic cellsCited by: 10
Author(s): Camille A. Spinner, Sandrine Uttenweiler-Joseph, Arnaud Métais, Alexandre Stella, Odile Burlet‐Schiltz, Christel Moog-Lutz, Isabelle Lamsoul, Pierre G. Lutz
Software Mentions: 1
Published: almost 11 years ago
10.1038/srep16305
Insights into immune responses in oral cancer through proteomic analysis of saliva and salivary extracellular vesiclesCited by: 102
Author(s): Flávia Vischi Winck, Ana Carolina Prado Ribeiro, Romênia R. Domingues, Ling Liu, Diego Mauricio Riaño-Pachón, César Rivera, Thaís Bianca Brandão, Adriele Ferreira Gouvêa, Alan Roger Santos‐Silva, Ricardo D. Coletta, Adriana Franco Paes Leme
Software Mentions: 1
Published: almost 11 years ago
10.1038/srep20043
Alterations of the cytoskeleton in human cells in space proved by life-cell imagingCited by: 88
Author(s): Thomas J. Corydon, Sascha Kopp, Markus Wehland, Markus Braun, Andreas Schütte, T. Mayer, Thomas Hülsing, Hergen Oltmann, Burkhard Schmitz, Ruth Hemmersbach, Daniela Grimm
Software Mentions: 1
Published: over 10 years ago
10.1038/srep20108
Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciensCited by: 44
Author(s): Lin Liu, Guangyuan Wang, Limin Song, Binna Lv, Wenxing Liang
Software Mentions: 1
Published: over 10 years ago
10.1038/srep22675
A covalent and cleavable antibody-DNA conjugation strategy for sensitive protein detection via immuno-PCRCited by: 65
Author(s): Jessie A.G.L. van Buggenum, Jan P. Gerlach, Selma Eising, Lise Schoonen, Roderick A. P. M. van Eijl, Sabine E.J. Tanis, Mark Hogeweg, Nina C. Hubner, Jan C. M. van Hest, Kimberly M. Bonger, Klaas W. Mulder
Software Mentions: 1
Published: over 10 years ago
10.1038/srep22635
Quantitative proteomics study of the neuroprotective effects of B12 on hydrogen peroxide-induced apoptosis in SH-SY5Y cellsCited by: 26
Author(s): Liang Zhong, Juntuo Zhou, Xi Chen, Yonggen Lou, Dan Liú, Xiajuan Zou, Bin Yang, Yuxin Yin, Yan Pan
Software Mentions: 1
Published: over 10 years ago
10.1038/srep23530
Changes in Gab2 phosphorylation and interaction partners in response to interleukin (IL)-2 stimulation in T-lymphocytesCited by: 8
Author(s): Nerea Osinalde, Virginia Sánchez-Quiles, Blagoy Blagoev, Irina Kratchmarova
Software Mentions: 1
Published: over 10 years ago