Projects: cran: Andromeda
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/Andromeda
Asynchronous Disk-Based Representation of Massive Data
10 versions
Latest release: over 3 years ago
3 dependent packages
1,891 downloads last month
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Educational Contributors:
msuchard@ucla.edu
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Observational Health Data Sciences and Informatics (organization)
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Science Score: 85/100
Starting Score: 100 points
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+20
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1 contributors with educational email addresses -
+15
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Repository owned by research institution
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1 non-scientific terms found
Very Likely Science (85)
Papers Mentioning Andromeda 1,724
10.3389/fimmu.2018.00405
Differential Phagocytic Properties of CD45low Microglia and CD45high Brain Mononuclear Phagocytes—Activation and Age-Related EffectsCited by: 80
Author(s): Srikant Rangaraju, Syed Ali Raza, Noel Xiang'An Li, Ranjita Betarbet, Eric B. Dammer, Duc M. Duong, James J. Lah, Nicholas T. Seyfried, Aĺlan I. Levey
Software Mentions: 1
Published: over 8 years ago
10.3389/fimmu.2019.00097
New Insights for RANKL as a Proinflammatory Modulator in Modeled Inflammatory ArthritisCited by: 30
Author(s): Maria Papadaki, Vagelis Rinotas, Foteini Violitzi, Trias Thireou, George Panayotou, Martina Samiotaki, Eleni Douni
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2020.597818
Novel Extracellular Electron Transfer Channels in a Gram-Positive Thermophilic BacteriumCited by: 14
Author(s): С. Н. Гаврилов, Д. Г. Заварзина, Ivan M. Elizarov, Т. V. Tikhonova, Н. И. Дергоусова, Vladimir O. Popov, Jonathan R. Lloyd, David Knight, Mohamed Y. El‐Naggar, Sahand Pirbadian, Kar Man Leung, Frank T. Robb, Maksim Zakhartsev, Orianna Bretschger, E. A. Bonch-Osmolovskaya
Software Mentions: 1
Published: almost 6 years ago
10.3389/fmicb.2017.01215
Outer Membrane Proteome of Veillonella parvula: A Diderm Firmicute of the Human MicrobiomeCited by: 48
Author(s): Daniel Poppleton, Magalie Duchateau, Véronique Hourdel, Mariette Matondo, Jennifer Flechsler, Andreas Klingl, Christophe Beloin, Simonetta Gribaldo
Software Mentions: 1
Published: over 9 years ago
10.3389/fmicb.2019.02304
Francisella tularensis subsp. holarctica Releases Differentially Loaded Outer Membrane Vesicles Under Various Stress ConditionsCited by: 27
Author(s): Jana Klimentová, Ivona Pávková, Lenka Horcickova, Jan Bavlovič, Olga Kofroňová, Oldřich Benada, Jiřı́ Stulı́k
Software Mentions: 1
Published: about 7 years ago
10.3389/fmicb.2018.01174
Multi-Omics and Targeted Approaches to Determine the Role of Cellular Proteases in Streptomyces Protein SecretionCited by: 20
Author(s): Tobias Busche, Konstantinos C. Tsolis, Joachim Koepff, Yuriy Rebets, Christian Rückert, Mohamed Belal Hamed, Arne Bleidt, Wolfgang Wiechert, Maria Lopatniuk, Yousra Ahmed, Jozef Anné, Spyridoula Karamanou, Marco Oldiges, Jörn Kalinowski, Andriy Luzhetskyy, Anastassios Economou
Software Mentions: 1
Published: over 8 years ago
10.3389/fmicb.2017.02674
Comprehensive Proteomic Analysis of Lysine Acetylation in the Foodborne Pathogen Trichinella spiralisCited by: 14
Author(s): Yong Yang, Mingwei Tong, Xue Bai, Xiaolei Liu, Xuepeng Cai, Xuenong Luo, Peihao Zhang, Wei Cai, Isabelle Vallée, Yonghua Zhou, Mingyuan Liu
Software Mentions: 1
Published: almost 9 years ago
10.3389/fmicb.2015.00103
Characterization of the E. coli proteome and its modifications during growth and ethanol stressCited by: 107
Author(s): Boumediene Soufi, Karsten Krug, Andreas Harst, Boris Maček
Software Mentions: 1
Published: over 11 years ago
10.3389/fmicb.2021.664061
Comparative Proteomics Reveals the Anaerobic Lifestyle of Meat-Spoiling Pseudomonas SpeciesCited by: 19
Author(s): Sandra Kolbeck, Miriam Abele, Maik Hilgarth, Rudi F. Vogel
Software Mentions: 1
Published: over 5 years ago
10.3389/fmicb.2016.01049
Proteomic Analysis of the Hydrogen and Carbon Monoxide Metabolism of Methanothermobacter marburgensisCited by: 25
Author(s): Martijn Diender, Ricardo Aparecido Pereira, Hans Wessels, Alfons Johannes Maria Stams, Diana Z. Sousa
Software Mentions: 1
Published: over 10 years ago
10.3389/fmicb.2021.604034
Extensive Reannotation of the Genome of the Model Streptomycete Streptomyces lividans TK24 Based on Transcriptome and Proteome InformationCited by: 4
Author(s): Julian Droste, Christian Rückert, Jörn Kalinowski, Mohamed Belal Hamed, Jozef Anné, Kenneth Simoens, Kristel Bernaerts, Anastassios Economou, Tobias Busche
Software Mentions: 1
Published: over 5 years ago
10.3389/fmicb.2017.00418
Functional Investigation of Iron-Responsive Microsomal Proteins, including MirC, in Aspergillus fumigatusCited by: 15
Author(s): Eoin Mulvihill, Nicola M. Moloney, Rebecca A. Owens, Stephen K. Dolan, Lauren Russell, Seán Doyle
Software Mentions: 1
Published: over 9 years ago
10.3389/fmicb.2019.03081
Proteomic Profiling Reveals the Architecture of Granulomatous Lesions Caused by Tuberculosis and Mycobacterium avium Complex Lung DiseaseCited by: 12
Author(s): Shintaro Seto, Kozo Morimoto, Tsutomu Yoshida, Masayuki Hiramatsu, Makoto Hijikata, Toshi Nagata, Fumihito Kikuchi, Yuji Shiraishi, Atsuyuki Kurashima, Naoto Keicho
Software Mentions: 1
Published: almost 7 years ago
10.3389/fmicb.2018.03033
Characterization of Sigma Factor Genes in Streptomyces lividans TK24 Using a Genomic Library-Based Approach for Multiple Gene DeletionsCited by: 14
Author(s): Yuriy Rebets, Konstantinos C. Tsolis, Elísabet Eik Guðmundsdóttir, Joachim Koepff, Beata Wawiernia, Tobias Busche, Arne Bleidt, Liliya Horbal, Maksym Myronovskyi, Yousra Ahmed, Wolfgang Wiechert, Christian Rückert, Mohamed Belal Hamed, Bohdan Bilyk, Jozef Anné, Ólafur H. Friðjónsson, Jörn Kalinowski, Marco Oldiges, Anastassios Economou, Andriy Luzhetskyy
Software Mentions: 1
Published: almost 8 years ago
10.3389/fmicb.2018.03285
Intricate Crosstalk Between Lipopolysaccharide, Phospholipid and Fatty Acid Metabolism in Escherichia coli Modulates Proteolysis of LpxCCited by: 31
Author(s): Nikolas Thomanek, Jan Arends, Claudia Lindemann, Katalin Barkovits, Helmut E. Meyer, Katrin Marcus, Franz Narberhaus
Software Mentions: 1
Published: almost 8 years ago
10.3389/fmicb.2016.00533
Tyrosine 601 of Bacillus subtilis DnaK Undergoes Phosphorylation and Is Crucial for Chaperone Activity and Heat Shock Survival‡Cited by: 12
Author(s): Lei Shi, Vaishnavi Ravikumar, Abderahmane Derouiche, Boris Maček, Ivan Mijaković
Software Mentions: 1
Published: over 10 years ago
10.3389/fmicb.2019.00100
Deprivation of the Periplasmic Chaperone SurA Reduces Virulence and Restores Antibiotic Susceptibility of Multidrug-Resistant Pseudomonas aeruginosaCited by: 28
Author(s): Kristina Klein, Michael Sonnabend, Lisa Lucie Frank, Karolin Leibiger, Mirita Franz‐Wachtel, Boris Maček, Thomas Trunk, Jack C. Leo, Ingo B. Autenrieth, Monika Schütz, Erwin Bohn
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2021.623735
Proteome-Wide Analysis of Lysine 2-Hydroxyisobutyrylated Proteins in Fusarium oxysporumCited by: 5
Author(s): Hengwei Qian, Lulu Wang, Xian-Liang Ma, Xingling Yi, Baoshan Wang, Wenxing Liang
Software Mentions: 1
Published: over 5 years ago
10.3389/fmicb.2021.719337
Proteome-Wide Analysis of Lysine 2-Hydroxyisobutyrylation in Aspergillus niger in PeanutsCited by: 6
Author(s): Manlin Xu, Xia Zhang, Jing Yu, Zhiqing Guo, Ying Liu, Xinying Song, Kang He, Guowei Li, Yucheng Chi
Software Mentions: 1
Published: about 5 years ago
10.3389/fmicb.2014.00751
Functional genomics of corrinoid starvation in the organohalide-respiring bacterium Dehalobacter restrictus strain PER-K23Cited by: 23
Author(s): Aamani Rupakula, Yue Lu, Thomas Kruse, Sjef Boeren, Christof Holliger, Hauke Smidt, Julien Maillard
Software Mentions: 1
Published: almost 12 years ago
10.3389/fmicb.2014.00356
Analysis of T4SS-induced signaling by H. pylori using quantitative phosphoproteomicsCited by: 17
Author(s): Frithjof Glowinski, Carsten Holland, Bernd Thiede, Peter R. Jungblut, Thomas Meyer
Software Mentions: 1
Published: over 12 years ago
10.3389/fmicb.2019.02613
Proteome-Wide Identification of Lysine Propionylation in the Conidial and Mycelial Stages of Trichophyton rubrumCited by: 9
Author(s): Xingye Xu, Xingwei Cao, Jian Yang, Lihong Chen, Bo Liu, Tao Liu, Qi Jin
Software Mentions: 1
Published: almost 7 years ago
10.3389/fmicb.2020.632367
Comprehensive Succinylome Profiling Reveals the Pivotal Role of Lysine Succinylation in Energy Metabolism and Quorum Sensing of Staphylococcus epidermidisCited by: 9
Author(s): Yiping Zhao, Yang Han, Yuzhe Sun, Zhen-Dong Wei, Jialong Chen, Xueli Niu, Qian An, Li Zhang, Ruiqun Qi, Xinghua Gao
Software Mentions: 1
Published: over 5 years ago