Projects: cran: Andromeda
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/Andromeda
Asynchronous Disk-Based Representation of Massive Data
10 versions
Latest release: over 3 years ago
3 dependent packages
1,891 downloads last month
Enhanced Analysis
Educational Contributors:
msuchard@ucla.edu
Repository Activity:
Repository Owner:
Observational Health Data Sciences and Informatics (organization)
Institutional
README Analysis:
Science Score: 85/100
Starting Score: 100 points
Bonuses:
-
+20
Educational commit emails
1 contributors with educational email addresses -
+15
Institutional repository owner
Repository owned by research institution
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description -
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (85)
Papers Mentioning Andromeda 1,724
10.1038/s41598-020-60890-x
Proteomic identification of early urinary-biomarkers of acute kidney injury in preterm infantsCited by: 19
Author(s): Young Hwa Jung, Dohyun Han, Seung Han Shin, Ee Kyung Kim, Han Suk Kim
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-62389-x
SPANX-A/D protein subfamily plays a key role in nuclear organisation, metabolism and flagellar motility of human spermatozoaCited by: 9
Author(s): Itziar Urizar-Arenaza, Nerea Osinalde, Vyacheslav Akimov, Michele Puglia, Iraia Muñoa-Hoyos, Marta Gianzo Citores, José Antonio Rodriguez, Teresa Ganzabal, Blagoy Blagoev, Irina Kratchmarova, Nerea Subirán
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-63318-8
C-reactive protein (CRP) recognizes uric acid crystals and recruits proteases C1 and MASP1Cited by: 15
Author(s): Anika Alberts, Annika Klingberg, Anne Kathrin Wessig, Christèle Combes, Torsten Witte, Korbinian Brand, Andreas Pich, Konstantin Neumann
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-64534-y
Differential responses to kinase inhibition in FGFR2-addicted triple negative breast cancer cells: a quantitative phosphoproteomics studyCited by: 9
Author(s): Debbie L. Cunningham, Adil R. Sarhan, Andrew J. Creese, Katherine P. B. Larkins, Hongyan Zhao, Harriet R. Ferguson, Katie Brookes, Anna A. Marusiak, Helen J. Cooper, John K. Heath
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-67672-5
Cystathionine β-synthase deficiency: different changes in proteomes of thrombosis-resistant Cbs−/− mice and thrombosis-prone CBS−/− humansCited by: 8
Author(s): Marta Sikora, I Lewandowska, Łukasz Marczak, Ewa Bretes, Hieronim Jakubowski
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-67505-5
Global analysis of protein degradation in prion infected cellsCited by: 2
Author(s): Charles R. Hutti, Kevin Welle, Jennifer R. Hryhorenko, Sina Ghaemmaghami
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-70230-8
Proteome and lysine acetylome analysis reveals insights into the molecular mechanism of seed germination in wheatCited by: 13
Author(s): Weiwei Guo, Li Han, Ximei Li, Hong Wang, Mu Peng, Qingsong Lin, Qingchang Liu, Yumei Zhang
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-71634-2
Quantitative proteomic analysis of the tizoxanide effect in vero cellsCited by: 5
Author(s): Kristie Aimi Yamamoto, Kevin Blackburn, Edimilson Migowski, Michael B. Goshe, Dennis T. Brown, Davis Fernandes Ferreira, Márcia Regina Soares
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-71712-5
High-resolution proteomics reveals differences in the proteome of spelt and bread wheat flour representing targets for research on wheat sensitivitiesCited by: 13
Author(s): Muhammad Afzal, Jens Pfannstiel, Julia Zimmermann, Stephan C. Bischoff, Tobias Würschum, C. Friedrich H. Longin
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-71491-z
Membrane disruption, but not metabolic rewiring, is the key mechanism of anticancer-action of FASN-inhibitors: a multi-omics analysis in ovarian cancerCited by: 11
Author(s): Thomas W. Grunt, Astrid Slany, Mariya Semkova, Ramón Colomer, María L. López‐Rodríguez, Michael Wuczkowski, Renate Wagner, Christopher Gerner, Gerald Stübiger
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-71950-7
Connectivity mapping of glomerular proteins identifies dimethylaminoparthenolide as a new inhibitor of diabetic kidney diseaseCited by: 13
Author(s): Julie Klein, Cécile Caubet, Mylène Camus, Manousos Makridakis, Colette Denis, Marion Gilet, Guylène Feuillet, Simon Rascalou, Eric Neau, Luc Garrigues, Olivier Thillaye du Boullay, Harald Mischak, Bernard Monsarrat, Odile Burlet‐Schiltz, Antonia Vlahou, Jean Sébastien Saulnier-Blache, Jean-Loup Bascands, Joost P. Schanstra
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-72391-y
Yeast Ppz1 protein phosphatase toxicity involves the alteration of multiple cellular targetsCited by: 18
Author(s): Diego Velázquez, Marcel Albacar, Chunyi Zhang, Carlos Calafí, María López-Malo, Javier Torres‐Torronteras, Ramón Martí, Sergey I. Kovalchuk, Benoı̂t Pinson, Ole N. Jensen, Antonio Casamayor, Joaquı́n Ariño
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-020-78557-y
Comparative proteomic analysis of the sweetpotato provides insights into response mechanisms to Fusarium oxysporum f. sp. batatasCited by: 4
Author(s): Shu‐Fang Lin, Zhijian Yang, Bifang Huang, Chuyun Bi, Xiaofang Huang, GuoTai Chen, Nuerla Nijiati, XuanYang Chen
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-020-79049-9
DEAD-box RNA helicase protein DDX21 as a prognosis marker for early stage colorectal cancer with microsatellite instabilityCited by: 8
Author(s): Atsushi Tanaka, Julia Y. Wang, Jinru Shia, Yihua Zhou, Masakata Ogawa, Ronald C. Hendrickson, David S. Klimstra, Michael H. A. Roehrl
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-80120-8
In-depth blood proteome profiling analysis revealed distinct functional characteristics of plasma proteins between severe and non-severe COVID-19 patientsCited by: 72
Author(s): Joonho Park, Hyeyoon Kim, So Yeon Kim, Yeonjae Kim, Hyukmin Lee, Kisoon Dan, Moon Woo Seong, Dohyun Han
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-79378-9
Octenidine-based hydrogel shows anti-inflammatory and protease-inhibitory capacities in wounded human skinCited by: 18
Author(s): Saskia Seiser, Lukas Janker, Nina Zila, Michael Mildner, Ana Rakita, Johannes Matiasek, Andrea Bileck, Christopher Gerner, Verena Paulitschke, Adelheid Elbe‐Bürger
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-79580-9
Molecular basis of the interaction of the human tyrosine phosphatase PTPN3 with the hepatitis B virus core proteinCited by: 9
Author(s): Mariano Genera, Barbara Quioc-Salomon, Antonin Nourisson, Baptiste Colcombet-Cazenave, Ahmed Haouz, A.E. Mechaly, Mariette Matondo, Magalie Duchateau, Alexander König, Marc P. Windisch, Christine Neuveut, Nicolas Wolff, Célia Caillet‐Saguy
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-83169-1
The multifunctional role of SPANX-A/D protein subfamily in the promotion of pro-tumoural processes in human melanomaCited by: 2
Author(s): Itziar Urizar-Arenaza, Aitor Benedicto, Arantza Perez‐Valle, Nerea Osinalde, Vyacheslav Akimov, Iraia Muñoa-Hoyos, José Antonio Rodriguez, Aintzane Asumendi, María Dolores Boyano, Blagoy Blagoev, Irina Kratchmarova, Nerea Subirán
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-83666-3
Metabolic labeling with an alkyne probe reveals similarities and differences in the prenylomes of several brain-derived cell lines and primary cellsCited by: 8
Author(s): Kiall F. Suazo, Angela Jeong, Mina Ahmadi, Caroline Brown, Wenhui Qu, Ling Li, Mark D. Distefano
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-84385-5
An integrated transcriptomic and proteomic approach to identify the main Torymus sinensis venom componentsCited by: 15
Author(s): Carmen Scieuzo, Rosanna Salvia, Antonio Franco, Marco Pezzi, Flora Cozzolino, Milvia Chicca, Chiara Scapoli, Heiko Vogel, Maria Monti, Chiara Ferracini, Pietro Pucci, Alberto Alma, Patrizia Falabella
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-85004-z
Protein network analyses of pulmonary endothelial cells in chronic thromboembolic pulmonary hypertensionCited by: 8
Author(s): Sarath Babu Nukala, Olga Tura-Ceide, Giancarlo Aldini, Valérie F. E. D. Smolders, Isabel Blanco, Víctor I. Peinado, Manuel Castellà, Joan Albert Barberà, Alessandra Altomare, Giovanna Baron, Marina Carini, Marta Cascante, Alfonsina D’Amato
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-85879-y
Global analysis of lysine 2-hydroxyisobutyrylation in wheat rootCited by: 5
Author(s): Feng Bo, Shengdong Li, Zongshuai Wang, Fengming Cao, Wenhua Zheng, Chunhua Gao, Li Geng, Kong Ling'an
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-85988-8
Comparative proteomic profiling of newly acquired, virulent and attenuated Neoparamoeba perurans proteins associated with amoebic gill diseaseCited by: 3
Author(s): Kerrie Ní Dhufaigh, Eugene Dillon, Natasha A. Botwright, Anita Talbot, Ian O’Connor, Eugene MacCarthy, Orla Slattery
Software Mentions: 1
Published: over 5 years ago