cran: AUC | Projects | Ecosyste.ms: Papers

10.1155/2021/6656926

The Preference, Effect, and Prognosis of Intra-Aortic Balloon Counterpulsation in Acute Myocardial Infarction Complicated by Cardiogenic Shock Patients: A Retrospective Cohort Study
Cited by: 0
Author(s): Wenjun Wang, Fang Yang, Xixiang Lin, Qin Zhong, Zongren Li, Xu Chen, Junfeng Wang, Kunlun He
Software Mentions: 12
Published: almost 4 years ago

10.1186/s12920-017-0303-0

Classifying cancer genome aberrations by their mutually exclusive effects on transcription
Cited by: 8
Author(s): Jonathan Dayton, Stephen R. Piccolo
Software Mentions: 12
Published: about 7 years ago

10.1186/s12885-017-3726-2

Guanylate-binding protein-1 is a potential new therapeutic target for triple-negative breast cancer
Cited by: 26
Author(s): Melissa Quintero, Douglas Adamóski, Larissa Menezes dos Reis, Carolline Fernanda Rodrigues Ascenção, Krishina Ratna Sousa de Oliveira, Kaliandra de Almeida Gonçalves, Milton Dias, Marcelo Falsarella Carazzolle, Sandra Martha Gomes Dias
Software Mentions: 9
Published: about 7 years ago

10.1371/journal.pone.0201751

Pancreatic cancer survival analysis defines a signature that predicts outcome
Cited by: 52
Author(s): Pichai Raman, Ravikanth Maddipati, Kian Huat Lim, Aydın Tözeren
Software Mentions: 7
Published: over 6 years ago

10.1038/srep37393

Changes of bivalent chromatin coincide with increased expression of developmental genes in cancer
Cited by: 84
Author(s): Stephan H. Bernhart, Helene Kretzmer, Lesca M. Holdt, Frank Jühling, Ole Ammerpohl, Anke Bergmann, Bernd H. Northoff, Gero Doose, Reiner Siebert, Peter F. Stadler, Steve Hoffmann
Software Mentions: 5
Published: about 8 years ago

10.1371/journal.pgen.1007289

Degenerate Pax2 and Senseless binding motifs improve detection of low-affinity sites required for enhancer specificity
Cited by: 14
Author(s): Arya Zandvakili, Ian K. Campbell, Lisa M. Gutzwiller, Matthew T. Weirauch, Brian Gebelein
Software Mentions: 5
Published: over 6 years ago

10.1038/s42003-021-02419-0

14-3-3-protein regulates Nedd4-2 by modulating interactions between HECT and WW domains
Cited by: 23
Author(s): Pavel Pohl, Rohit Joshi, Olívia Petrvalská, Tomáš Obšil, Veronika Obšilová
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-019-52537-3

Structural characterization of the RH1-LZI tandem of JIP3/4 highlights RH1 domains as a cytoskeletal motor-binding motif
Cited by: 19
Author(s): Fernando Vilela, Christophe Velours, Mélanie Chenon, Magali Aumont-Niçaise, Valérie Campanacci, Aurélien Thureau, Olena Pylypenko, Jessica Andréani, P. Llinas, J. Menetrey
Software Mentions: 4
Published: about 5 years ago

10.1074/jbc.RA118.004767

Two distinct conformations of factor H regulate discrete complement-binding functions in the fluid phase and at cell surfaces
Cited by: 9
Author(s): Amy J. Osborne, Ruodan Nan, Arthur I. Miller, Jayesh S. Bhatt, Jayesh Gor, Stephen J. Perkins
Software Mentions: 4
Published: about 6 years ago

10.18632/oncotarget.22689

Systematic assessment of cervical cancer initiation and progression uncovers genetic panels for deep learning-based early diagnosis and proposes novel diagnostic and prognostic biomarkers
Cited by: 32
Author(s): Nguyen Phuoc Long, Kyung Hee Jung, Sang Jun Yoon, Nguyễn Hoàng Anh, Tran Diem Nghi, Yun Pyo Kang, Pengcheng Zhang, Jung Eun Min, Sung Kyung Hong, Sung Won Kwon
Software Mentions: 4
Published: about 7 years ago

10.1371/currents.outbreaks.90e80717c4e67e1a830f17feeaaf85de

Integrating Environmental Monitoring and Mosquito Surveillance to Predict Vector-borne Disease: Prospective Forecasts of a West Nile Virus Outbreak
Cited by: 22
Author(s): Justin K. Davis, Geoffrey P. Vincent, Michael B. Hildreth, Lon Kightlinger, Christopher Carlson, Michael C. Wimberly
Software Mentions: 4
Published: almost 8 years ago

10.1098/rsos.171398

Isotopic niche reflects stress-induced variability in physiological status
Cited by: 41
Author(s): Agnes M. L. Karlson, Martin Reutgard, Andrius Garbaras, Elena Gorokhova
Software Mentions: 4
Published: almost 7 years ago

10.1016/j.mex.2019.09.035

The use of classification and regression algorithms using the random forests method with presence-only data to model species’ distribution
Cited by: 17
Author(s): Lei Zhang, Falk Huettmann, Xudong Zhang, Shirong Liu, Sun Park, Zhen Yu, Chunrong Mi
Software Mentions: 4
Published: almost 6 years ago

10.1186/1471-2105-16-S13-S9

Understanding and predicting binding between human leukocyte antigens (HLAs) and peptides by network analysis
Cited by: 18
Author(s): Heng Luo, Yue Hao, Hui Wen Ng, Leming Shi, Weida Tong, William B. Mattes, Donna L. Mendrick, Huasheng Hong
Software Mentions: 3
Published: about 9 years ago

10.1038/s41598-017-10085-8

Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq
Cited by: 14
Author(s): Eike C. Schulz, Markus Seiler, Cecilia Zuliani, Franka Voigt, Vladimir Rybin, Vivian Pogenberg, Norbert Mücke, Matthias Wilmanns, Toby J. Gibson, O. Barábas
Software Mentions: 3
Published: over 7 years ago

10.1007/s00405-019-05687-z

Prediction of aspiration in dysphagia using logistic regression: oral intake and self-evaluation
Cited by: 9
Author(s): Bas J. Heijnen, Stefan Böhringer, Renée Speyer
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.ppat.1003563

Crystal Structure of Vaccinia Viral A27 Protein Reveals a Novel Structure Critical for Its Function and Complex Formation with A26 Protein
Cited by: 25
Author(s): Tang‐Hsien Chang, Shu-Han Chang, Fu-Lien Hsieh, Tzu‐Ping Ko, Cheng-Tse Lin, Meng‐Ru Ho, Iren Wang, Shang-Te Danny Hsu, Rey‐Ting Guo, Wen Chang, Andrew H.-J. Wang
Software Mentions: 2
Published: over 11 years ago

10.1042/BCJ20180867

Solution structures and biophysical analysis of full-length group A PAKs reveal they are monomeric and auto-inhibited in <i>cis</i>
Cited by: 10
Author(s): F.J. Sorrell, Lena Marie Kilian, J.M. Elkins
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pbio.2003145

Uncovering protein–protein interactions through a team-based undergraduate biochemistry course
Cited by: 14
Author(s): David L. Cookmeyer, Emily S. Winesett, Bashkim Kokona, Adam R. Huff, Sabina Aliev, Noah B. Bloch, Joshua A. Bulos, Irene L. Evans, Christian Fagre, Kerilyn N. Godbe, Maryna Khromava, Daniel Konstantinovsky, Alexander E. Lafrance, Alexandra J. Lamacki, Robert C. Parry, Jeanne M. Quinn, Alana M. Thurston, Kathleen J. S. Tsai, Aurelio Mollo, Max J. Cryle, Robert Fairman, Louise K. Charkoudian
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0021217

Vancomycin Heteroresistance Is Associated with Reduced Mortality in ST239 Methicillin-Resistant Staphylococcus aureus Blood Stream Infections
Cited by: 64
Author(s): Sebastiaan J. van Hal, Mark Jones, Iain B Gosbell, David L. Paterson
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0121055

Scalable Production in Human Cells and Biochemical Characterization of Full-Length Normal and Mutant Huntingtin
Cited by: 36
Author(s): Bin Huang, Tanja Lucas, Claudia Kueppers, Xiaomin Dong, Maike Krause, Alexander Bepperling, Johannes Büchner, Hans Voshol, Andreas Weiss, Bertran Gerrits, Stefan Kochanek
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0003619

Structures of the Signal Recognition Particle Receptor from the Archaeon Pyrococcus furiosus: Implications for the Targeting Step at the Membrane
Cited by: 22
Author(s): Pascal F. Egea, Hiro Tsuruta, Gladys P. de Leon, Johanna Napetschnig, Peter Walter, Robert M. Stroud
Software Mentions: 2
Published: about 16 years ago

10.1371/journal.pone.0083745

Application of Multi-SNP Approaches Bayesian LASSO and AUC-RF to Detect Main Effects of Inflammatory-Gene Variants Associated with Bladder Cancer Risk
Cited by: 18
Author(s): Evangelina López de Maturana, Yuanqing Ye, M. Luz Calle, Nathaniel Rothman, Víctor Urrea, Manolis Kogevinas, Sandra Petrus, Stephen J. Chanock, Adonina Tardón, Montserrat García‐Closas, Anna González‐Neira, Gemma Vellalta, Alfredo Carrato, Arcadi Navarro, Belén Lorente-Galdós, Debra T. Silverman, Francisco X. Real, Xifeng Wu, Núria Malats
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0221476

Classification of early and late stage liver hepatocellular carcinoma patients from their genomics and epigenomics profiles
Cited by: 36
Author(s): Harpreet Kaur, Sherry Bhalla, Gajendra P. S. Raghava
Software Mentions: 2
Published: over 5 years ago

10.1186/s12964-016-0140-3

A new mode of SAM domain mediated oligomerization observed in the CASKIN2 neuronal scaffolding protein
Cited by: 9
Author(s): Ekaterina Smirnova, Janice Kwan, Ryan Siu, Xin Gao, Georg Zoidl, Borries Demeler, V. Saridakis, Logan W. Donaldson
Software Mentions: 2
Published: over 8 years ago

10.3389/fgene.2019.00937

Deep Learning Enables Accurate Prediction of Interplay Between lncRNA and Disease
Cited by: 13
Author(s): Jialu Hu, Yiqun Gao, Jing Li, Xuequn Shang
Software Mentions: 2
Published: about 5 years ago

10.1074/jbc.M115.684142

Unique Role of the WD-40 Repeat Protein 5 (WDR5) Subunit within the Mixed Lineage Leukemia 3 (MLL3) Histone Methyltransferase Complex
Cited by: 21
Author(s): Stephen A. Shinsky, Michael S. Cosgrove
Software Mentions: 2
Published: about 9 years ago

10.1038/s41598-019-46216-6

Reproduction of molecular subtypes of gastric adenocarcinoma by transcriptome sequencing of archival tissue
Cited by: 7
Author(s): You Jeong Heo, Charny Park, Doyeong Yu, Jeeyun Lee, Kyoung‐Mee Kim
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-81251-2

Analysis of insulin glulisine at the molecular level by X-ray crystallography and biophysical techniques
Cited by: 6
Author(s): Richard B. Gillis, H.V. Solomon, Lata Govada, Neil J. Oldham, Vlad Dinu, Shahwar I. Jiwani, Philemon Gyasi-Antwi, Frank Coffey, Andy Meal, Paul S. Morgan, Stephen E. Harding, John R. Helliwell, Naomi E. Chayen, Gary G. Adams
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-021-85219-0

Solution structure of multi-domain protein ER-60 studied by aggregation-free SAXS and coarse-grained-MD simulation
Cited by: 8
Author(s): Aya Okuda, Masahiro Shimizu, Ken Morishima, Rintaro Inoue, Nobuhiro Sato, Reiko Urade, Masaaki Sugiyama
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-021-83737-5

Prioritizing antiviral drugs against SARS-CoV-2 by integrating viral complete genome sequences and drug chemical structures
Cited by: 27
Author(s): Lihong Peng, Lei Shen, Junlin Xu, Xiongfei Tian, Fuxing Liu, Juanjuan Wang, Geng Tian, Jialiang Yang, Liqian Zhou
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-021-91667-5

HSP-90/kinase complexes are stabilized by the large PPIase FKB-6
Cited by: 3
Author(s): Siyuan Sima, Katalin Barkovits, Katrin Marcus, Lukas Schmauder, Stephan M. Hacker, Nils Hellwig, Nina Morgner, Klaus Richter
Software Mentions: 2
Published: over 3 years ago

10.1128/mSystems.00181-18

Machine Learning Reveals Missing Edges and Putative Interaction Mechanisms in Microbial Ecosystem Networks
Cited by: 32
Author(s): Demetrius DiMucci, Mark A. Kon, Daniel Segrè
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0131022

Personalized Modeling for Prediction with Decision-Path Models
Cited by: 10
Author(s): Shyam Visweswaran, Antonio Ferreira, Guilherme Ribeiro, Alexandre César Muniz de Oliveira, Gregory F. Cooper
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0246790

Revealing posturographic profile of patients with Parkinsonian syndromes through a novel hypothesis testing framework based on machine learning
Cited by: 6
Author(s): Ioannis Bargiotas, Argyris Kalogeratos, Myrto Limnios, Pierre‐Paul Vidal, Damien Ricard, Nicolas Vayatis
Software Mentions: 1
Published: almost 4 years ago

10.1186/1471-2105-12-54

Identifying hypermethylated CpG islands using a quantile regression model
Cited by: 8
Author(s): Shuying Sun, Zhengyi Chen, Pearlly S. Yan, Yi‐Wen Huang, Shili Lin
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pcbi.1007942

Moving analytical ultracentrifugation software to a good manufacturing practices (GMP) environment
Cited by: 18
Author(s): Alexey Savelyev, Gary E. Gorbet, Amy Henrickson, Borries Demeler
Software Mentions: 1
Published: over 4 years ago

10.1038/s42003-020-1011-4

Integral approach to biomacromolecular structure by analytical-ultracentrifugation and small-angle scattering
Cited by: 7
Author(s): Ken Morishima, Aya Okuda, Rintaro Inoue, Nobuhiro Sato, Yoshihisa Miyamoto, Reiko Urade, Maho Yagi-Utsumi, Koichi Kato, Rina Hirano, Tomoya Kujirai, Hitoshi Kurumizaka, Masaaki Sugiyama
Software Mentions: 1
Published: over 4 years ago

10.1016/j.csbj.2021.07.036

Nucleobindin-2 consists of two structural components: The Zn2+-sensitive N-terminal half, consisting of nesfatin-1 and -2, and the Ca2+-sensitive C-terminal half, consisting of nesfatin-3
Cited by: 4
Author(s): Dominika Bystranowska, Anna Skorupska, Katarzyna Sołtys, Michał Padjasek, Artur Krężel, Andrzej Żak, Magdalena Kaus-Drobek, Michał Taube, Maciej Kozak, Andrzej Ożyhar
Software Mentions: 1
Published: almost 4 years ago

10.1186/cc14449

Continuous blood glucose monitoring reduces the risk to ICU patients
Cited by: 0
Author(s): KP Mulavisala, John Norrie, B Crane, Nicholas P. Barwell
Software Mentions: 1
Published: almost 10 years ago

10.3390/pharmaceutics12111112

Particle Detection and Characterization for Biopharmaceutical Applications: Current Principles of Established and Alternative Techniques
Cited by: 30
Author(s): Julia Gross-Rother, Michaela Blech, Eduard Preis, Udo Bakowsky, Patrick Garidel
Software Mentions: 1
Published: about 4 years ago

10.1007/s00249-020-01421-4

Measurement of length distribution of beta-lactoglobulin fibrils by multiwavelength analytical ultracentrifugation
Cited by: 9
Author(s): Maximilian J. Uttinger, Timon R. Heyn, Uwe Jandt, Simon E. Wawra, Bettina Winzer, Julia K. Keppler, Wolfgang Peukert
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00249-016-1159-5

Application of novel analytical ultracentrifuge analysis to solutions of fungal mannans
Cited by: 3
Author(s): Richard B. Gillis, Gary G. Adams, David T. M. Besong, Eva Machová, Anna Ebringerová, Arthur J. Rowe, Stephen E. Harding, Trushar R. Patel
Software Mentions: 1
Published: over 8 years ago

10.1002/1873-3468.12987

Structural basis of the specific interactions of <scp>GRAS</scp> family proteins
Cited by: 45
Author(s): Toshio Hakoshima
Software Mentions: 1
Published: almost 7 years ago

10.3389/fendo.2021.578250

The Antitumor Peptide ERα17p Exerts Anti-Hyperalgesic and Anti-Inflammatory Actions Through GPER in Mice
Cited by: 7
Author(s): Christophe Mallet, Ludivine Boudieu, Sylvain Lamoine, Catherine Coudert, Yves Jacquot, Alain Eschalier
Software Mentions: 1
Published: almost 4 years ago

10.7554/eLife.65587

Archaeal chromatin ‘slinkies’ are inherently dynamic complexes with deflected DNA wrapping pathways
Cited by: 31
Author(s): Samuel Bowerman, Jeff Wereszczynski, Karolin Luger
Software Mentions: 1
Published: almost 4 years ago

10.3389/fimmu.2020.601895

A Dimerization Site at SCR-17/18 in Factor H Clarifies a New Mechanism for Complement Regulatory Control
Cited by: 3
Author(s): Orla M. Dunne, Xin Gao, Ruodan Nan, Jayesh Gor, Penelope J. Adamson, David L. Gordon, Martine Moulin, Michael Haertlein, V. Trevor Forsyth, Stephen J. Perkins
Software Mentions: 1
Published: almost 4 years ago

10.1172/jci.insight.148378

Human intestinal lipid storage through sequential meals reveals faster dinner appearance is associated with hyperlipidemia
Cited by: 10
Author(s): Miriam Jácome-Sosa, Qiong Hu, Camila Manrique‐Acevedo, Robert D. Phair, Elizabeth J. Parks
Software Mentions: 1
Published: over 3 years ago

10.1074/jbc.M114.566588

N-terminal Domain of Prion Protein Directs Its Oligomeric Association
Cited by: 18
Author(s): Clare R. Trevitt, Laszlo L. P. Hosszu, Mark Batchelor, Silvia Panico, Cassandra Terry, Andrew J. Nicoll, Emmanuel Risse, William A. Taylor, Malin Sandberg, Huda Al-Doujaily, Jacqueline M. Linehan, Helen R. Saibil, David J. Scott, John Collinge, Jonathan P. Waltho, Anthony R. Clarke
Software Mentions: 1
Published: over 10 years ago

10.1074/jbc.M115.643072

NsrR from Streptomyces coelicolor Is a Nitric Oxide-sensing [4Fe-4S] Cluster Protein with a Specialized Regulatory Function
Cited by: 73
Author(s): Jason C. Crack, John Munnoch, Erin L. Dodd, Felicity Knowles, Mahmoud M. Al‐Bassam, Saeed Kamali, Ashley A. Holland, Stephen P. Cramer, Chris J. Hamilton, Michael K. Johnson, Andrew J. Thomson, Matthew I. Hutchings, Nick E. Le Brun
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2105-12-S8-S13

Detection of interaction articles and experimental methods in biomedical literature
Cited by: 16
Author(s): Gerold Schneider, Simon Clematide, Fabio Rinaldi
Software Mentions: 1
Published: about 13 years ago

10.3390/vision3040056

Salience Models: A Computational Cognitive Neuroscience Review
Cited by: 21
Author(s): Sofia Krasovskaya, W. Joseph MacInnes
Software Mentions: 1
Published: about 5 years ago

10.1074/jbc.RA120.016451

The cryo-EM structure of the endocytic receptor DEC-205
Cited by: 9
Author(s): Benjamin S. Gully, Hariprasad Venugopal, Alex J. Fulcher, Zhihui Fu, Jessica Li, Felix A. Deuss, Carmen Llerena, William R. Heath, Mireille H. Lahoud, Irina Caminschi, Jamie Rossjohn, Richard Berry
Software Mentions: 1
Published: almost 4 years ago

10.1016/j.jbc.2021.101054

Mechanism of dimerization and structural features of human LI-cadherin
Cited by: 4
Author(s): Anna Yui, José M. M. Caaveiro, Daisuke Kuroda, Makoto Nakakido, Satoru Nagatoishi, Shuichiro Goda, Takahiro Maruno, Susumu Uchiyama, Kouhei Tsumoto
Software Mentions: 1
Published: over 3 years ago

10.1007/s00167-020-05908-7

Usability of the AAOS Appropriate Use Criteria (AUC) for the surgical management of knee osteoarthritis in clinical practice
Cited by: 11
Author(s): Ghalib Ahmed, Kareem ELSweify, Abdulaziz F Ahmed
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00401-020-02195-x

Plasma p-tau181 accurately predicts Alzheimer’s disease pathology at least 8 years prior to post-mortem and improves the clinical characterisation of cognitive decline
Cited by: 188
Author(s): Juan Lantero‐Rodriguez, Thomas K. Karikari, Marc Suárez‐Calvet, Claire Troakes, Andrew King, Andreja Emeršič, Dag Aarsland, Abdul Hye, Henrik Zetterberg, Kaj Blennow, Nicholas J. Ashton
Software Mentions: 1
Published: over 4 years ago

10.3390/medicina57070676

Improved Methods for Mid-Term Blood Glucose Level Prediction Using Dietary and Insulin Logs
Cited by: 2
Author(s): Rebaz A. H. Karim, István Vassányi, István Kósa
Software Mentions: 1
Published: over 3 years ago

10.1038/srep13841

Dimerization of lipocalin allergens
Cited by: 25
Author(s): Merja Niemi, Marja Rytkönen‐Nissinen, Ilja Miettinen, Janne Jänis, Tuomas Virtanen, Juha Rouvinen
Software Mentions: 1
Published: over 9 years ago

10.1042/BST20180222

Characterisation of sensor kinase by CD spectroscopy: golden rules and tips
Cited by: 5
Author(s): Giuliano Siligardi, Charlotte Hughes, Rohanah Hussain
Software Mentions: 1
Published: about 6 years ago

10.1038/srep38938

A perturbation-based framework for link prediction via non-negative matrix factorization
Cited by: 35
Author(s): Wenjun Wang, Fei Cai, Pengfei Jiao, Lin Pan
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0126420

A Multilaboratory Comparison of Calibration Accuracy and the Performance of External References in Analytical Ultracentrifugation
Cited by: 67
Author(s): Huaying Zhao, Rodolfo Ghirlando, Carlos Alfonso, Fumio Arisaka, Ilan Attali, David L. Bain, Marina Bakhtina, Donald F. Becker, Gregory J. Bedwell, Ahmet Bekdemir, Tabot M. D. Besong, Catherine Birck, Chad A. Brautigam, William Brennerman, Olwyn Byron, Agnieszka Bzowska, Jonathan B. Chaires, Catherine T. Chaton, Helmut Cölfen, Keith D. Connaghan, Kimberly A. Crowley, Ute Curth, Tina Daviter, William L. Dean, Ana I. Díez, Christine Ebel, Debra M. Eckert, Leslie E. Eisele, Edward Eisenstein, Patrick England, Carlos Escalante, Jeffrey Fagan, Robert Fairman, Ron M. Finn, Wolfgang Fischle, José Garcı́a de la Torre, Jayesh Gor, Henning Gustafsson, Damien Hall, Stephen E. Harding, José G. Hernández Cifre, Andrew B. Herr, Elizabeth E. Howell, R. Stefan Isaac, Shu Chuan Jao, Davis Jose, Soon Jong Kim, Bashkim Kokona, Jack A. Kornblatt, Dalibor Košek, Elena Krayukhina, Daniel D. Krzizike, Eric A. Kusznir, Hyewon Kwon, Adam G. Larson, Thomas M. Laue, Aline Le Roy, Andrew Leech, Hauke Lilie, Karolin Luger, Juan Román Luque‐Ortega, Jia Ma, C.A. May, Ernest L. Maynard, Anna Modrak-Wójcik, Yee Foong Mok, Norbert Mücke, Luitgard Nagel-Steger, Geeta J. Narlikar, Masanori Noda, Amanda Nourse, Tomáš Obšil, Chad K. Park, Jin Ku Park, Peter D. Pawelek, Erby E. Perdue, Stephen J. Perkins, Matthew A. Perugini, Craig L. Peterson, Martin G. Peverelli, Grzegorz Piszczek, Gali Prag, Peter E. Prevelige, Bertrand Raynal, Lenka Řežábková, Klaus Richter, Alison E. Ringel, Rose Rosenberg, Arthur J. Rowe, Arne C. Rufer, David J. Scott, Javier Seravalli, Alexandra S. Solovyova, Renjie Song, David Staunton, Caitlin I. Stoddard, Katherine Stott, Holger M. Strauss, Werner Streicher, John P. Sumida, Sarah G. Swygert, Roman H. Szczepanowski, Ingrid Teßmer, Ronald Toth, Ashutosh Tripathy, Susumu Uchiyama, Stephan Uebel, Satoru Unzai, Anna Gruber, Peter H. von Hippel, Christine Wandrey, Szu Huan Wang, Steven E. Weitzel, Beata Wielgus‐Kutrowska, Cynthia Wolberger, Martin Wolff, Edward Wright, Wenbin Yu, Jacinta M. Wubben, Peter Schuck
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-06685-z

Glycoengineering of EphA4 Fc leads to a unique, long-acting and broad spectrum, Eph receptor therapeutic antagonist
Cited by: 11
Author(s): Cassandra L. Pegg, Leanne Cooper, Jing Zhao, Michael Gerometta, Fiona Smith, Michael W. Yeh, Perry F. Bartlett, Jeffrey J. Gorman, Andrew W. Boyd
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0130582

Computational Design of the β-Sheet Surface of a Red Fluorescent Protein Allows Control of Protein Oligomerization
Cited by: 9
Author(s): Timothy M. Wannier, Matthew M. Moore, Yun Mou, Stephen L. Mayo
Software Mentions: 1
Published: over 9 years ago

10.1186/s13040-016-0114-4

Compensation of feature selection biases accompanied with improved predictive performance for binary classification by using a novel ensemble feature selection approach
Cited by: 38
Author(s): Ursula Neumann, Mona Riemenschneider, Jan-Peter Sowa, Theodor Baars, Julia Kälsch, Ali Canbay, Dominik Heider
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0173459

Atomic force microscopy of chromatin arrays reveal non-monotonic salt dependence of array compaction in solution
Cited by: 10
Author(s): K Krzemień, Maximilian Beckers, Salina Quack, Jens Michaelis
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-017-13550-6

The major outer sheath protein forms distinct conformers and multimeric complexes in the outer membrane and periplasm of Treponema denticola
Cited by: 10
Author(s): Robbins Puthenveetil, Sanjiv Kumar, Melissa J. Caimano, Abhishek Dey, Asha Anand, Olga Vinogradova, Justin D. Radolf
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0053487

Temperature-Dependent Structural Changes of Parkinson's Alpha-Synuclein Reveal the Role of Pre-Existing Oligomers in Alpha-Synuclein Fibrillization
Cited by: 28
Author(s): Winny Ariesandi, Chi‐Fon Chang, Tseng-Erh Chen, Yun‐Ru Chen
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pgen.1002910

A Combinatorial Amino Acid Code for RNA Recognition by Pentatricopeptide Repeat Proteins
Cited by: 431
Author(s): Alice Barkan, Margarita Rojas, Sota Fujii, Aaron Yap, Yee Seng Chong, Charles S. Bond, Ian Small
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.06866

Regulation of the PI3K pathway through a p85α monomer–homodimer equilibrium
Cited by: 61
Author(s): Lydia W.T. Cheung, Katarzyna Walkiewicz, Tabot M. D. Besong, Haipeng Guo, David H. Hawke, Stefan T. Arold, Gordon B. Mills
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-019-51554-6

Colorimetric Assay Reports on Acyl Carrier Protein Interactions
Cited by: 5
Author(s): Kofi Acheampong, Bashkim Kokona, Gabriel A. Braun, Danielle Jacobsen, Karl A. Johnson, Louise K. Charkoudian
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0035984

The Proline Rich Homeodomain Protein PRH/Hhex Forms Stable Oligomers That Are Highly Resistant to Denaturation
Cited by: 6
Author(s): Alok Kumar Shukla, Nick Burton, Padma-Sheela Jayaraman, Kevin Gaston
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0201529

A radial calibration window for analytical ultracentrifugation
Cited by: 8
Author(s): Thomas W. LeBrun, Peter Schuck, Wei Ren, Justine S. Yoon, Xiaowei Dong, Nicole Y. Morgan, Jeffrey Fagan, Huaying Zhao
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0092209

Area under Precision-Recall Curves for Weighted and Unweighted Data
Cited by: 121
Author(s): Jens Keilwagen, Ivo Große, Jan Grau
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0151407

Characterisation of the Porphyromonas gingivalis Manganese Transport Regulator Orthologue
Cited by: 1
Author(s): Lianyi Zhang, Catherine A. Butler, Hasnah Begum Said Ghulam Khan, Stuart G. Dashper, Christine A. Seers, Paul D. Veith, Jian Guo Zhang, Eric C. Reynolds
Software Mentions: 1
Published: almost 9 years ago

Projects: cran: AUC

Papers Mentioning AUC 74