cran: ART | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0169357

Automated Image Sampling and Classification Can Be Used to Explore Perceived Naturalness of Urban Spaces
Cited by: 26
Author(s): Roger Hyam
Software Mentions: 2
Published: almost 8 years ago

NeSSM: A Next-Generation Sequencing Simulator for Metagenomics
Cited by: 56
Author(s): Ben Jia, Xuan Liu, Kaiye Cai, Zhiqiang Hu, Liangxiao Ma, Chaochun Wei
Software Mentions: 2
Published: about 11 years ago

10.1186/s13015-015-0052-6

GAML: genome assembly by maximum likelihood
Cited by: 8
Author(s): Vladimír Boža, Broňa Brejová, Tomáš Vinař
Software Mentions: 2
Published: over 9 years ago

10.1186/s12977-016-0308-3

Whole genome sequencing of 51 breast cancers reveals that tumors are devoid of bovine leukemia virus DNA
Cited by: 39
Author(s): Nicolas Gillet, Luc Willems
Software Mentions: 2
Published: about 8 years ago

10.1186/s12859-021-04058-y

Instance-based error correction for short reads of disease-associated genes
Cited by: 1
Author(s): Xuan Zhang, Yuansheng Liu, Zu-Guo Yu, Michael Blumenstein, György Hutvágner, Jinyan Li
Software Mentions: 2
Published: over 3 years ago

10.1093/annweh/wxx090

Solvent Transfer—Efficiency of Risk Management Measures
Cited by: 0
Author(s): Katharina Bluemlein, Manfred Elend, Tim Meijster, Alison Margary, Rosalie Tibaldi, Stefan Hahn, Susanne Hesse
Software Mentions: 2
Published: about 7 years ago

10.1093/texcom/tgab038

Cerebellar and Cortical Correlates of Internal and External Speech Error Monitoring
Cited by: 5
Author(s): Elin Runnqvist, Valérie Chanoine, Kristof Strijkers, Chotiga Pattamadilok, Mireille Bonnard, Bruno Nazarian, Julien Sein, Jean-Luc Anton, Lydia Dorokhova, Pascal Belin, F.‐Xavier Alario
Software Mentions: 2
Published: almost 4 years ago

10.1093/texcom/tgaa033

Associations between Amygdala-Prefrontal Functional Connectivity and Age Depend on Neighborhood Socioeconomic Status
Cited by: 15
Author(s): Bruce Ramphal, Mariah DeSerisy, David Pagliaccio, Elizabeth Raffanello, Virginia Rauh, Gregory Tau, Jonathan Posner, Rachel Marsh, Amy E. Margolis
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-017-10826-9

Direct comparison of performance of single nucleotide variant calling in human genome with alignment-based and assembly-based approaches
Cited by: 15
Author(s): Leihong Wu, Gökhan Yavaş, Huixiao Hong, Wenming Xiao
Software Mentions: 2
Published: about 7 years ago

10.1155/2020/8531502

Exploring the Consistency of the Quality Scores with Machine Learning for Next-Generation Sequencing Experiments
Cited by: 5
Author(s): Erdal Coşgun, Min Kyu Oh
Software Mentions: 2
Published: over 4 years ago

10.1186/s12859-020-3445-6

Joining Illumina paired-end reads for classifying phylogenetic marker sequences
Cited by: 10
Author(s): Tsunglin Liu, Chen-Yu Chen, An Chen-Deng, Yi Lin Chen, Jiu Yao Wang, Yung I. Hou, Min Lin
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-018-32689-4

Neural correlates of multi-day learning and savings in sensorimotor adaptation
Cited by: 23
Author(s): M.F.L. Ruitenberg, Vincent Koppelmans, Y. E. De Dios, N. E. Gadd, Scott J. Wood, P. A. Reuter-Lorenz, I. S. Kofman, Jacob J. Bloomberg, Ajitkumar P. Mulavara, Rachael D. Seidler
Software Mentions: 2
Published: about 6 years ago

10.1186/s41235-020-00247-0

Resting-state posterior alpha power changes with prolonged exposure in a natural environment
Cited by: 10
Author(s): Rachel J. Hopman, Sara LoTemplio, Emily Scott, Ty L. McKinney, David L. Strayer
Software Mentions: 2
Published: about 4 years ago

10.1111/bjep.12243

The role of neighbourhood greenspace in children's spatial working memory
Cited by: 39
Author(s): Eirini Flouri, Efstathios Papachristou, Emily Midouhas
Software Mentions: 2
Published: about 6 years ago

10.1186/s12859-017-1827-1

VAliBS: a visual aligner for bisulfite sequences
Cited by: 2
Author(s): Min Li, Peijun Huang, Xiaodong Yan, Jianxin Wang, Yi Pan, Fang‐Xiang Wu
Software Mentions: 2
Published: about 7 years ago

10.1186/s12859-019-3204-8

Deconvoluting the diversity of within-host pathogen strains in a multi-locus sequence typing framework
Cited by: 2
Author(s): Guo Liang Gan, Elijah Willie, Cédric Chauve, Leonid Chindelevitch
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-71471-3

A customized scaffolds approach for the detection and phasing of complex variants by next-generation sequencing
Cited by: 1
Author(s): Qiandong Zeng, Natalia T. Leach, Zhaoqing Zhou, Hui Zhu, Jean A. Smith, Lynne S Rosenblum, Angela Kenyon, Ruth A. Heim, Marcia Eisenberg, Stanley Letovsky, Patricia M. Okamoto
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-020-78456-2

Simultaneous imaging of hard and soft biological tissues in a low-field dental MRI scanner
Cited by: 14
Author(s): José M. Algarín, Elena Díaz Caballero, Jose M. Borreguero, Fernando Galve, D. Grau-Ruiz, J. P. Rigla, R. Bosch, José M. González, E. Pallás, Miguel Corberan, C. Gramage, Santiago Aja‐Fernández, A. Ríos, J. Benlloch, J. Alonso
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-021-83081-8

Critical evaluation of short, long, and hybrid assembly for contextual analysis of antibiotic resistance genes in complex environmental metagenomes
Cited by: 41
Author(s): Connor Brown, Ishi Keenum, Dongjuan Dai, Liqing Zhang, Peter J. Vikesland, Amy Pruden
Software Mentions: 2
Published: almost 4 years ago

10.1186/1471-2105-16-S5-S8

Re-alignment of the unmapped reads with base quality score
Cited by: 13
Author(s): Xiaoqing Peng, Jianxin Wang, Zhen Zhang, Qianghua Xiao, Min Li, Yi Pan
Software Mentions: 2
Published: over 9 years ago

10.1155/2014/843248

Adaptive Random Testing with Combinatorial Input Domain
Cited by: 6
Author(s): Rubing Huang, Jinfu Chen, Yilong Lu
Software Mentions: 2
Published: almost 11 years ago

10.1016/j.csbj.2017.07.002

Scalability and Validation of Big Data Bioinformatics Software
Cited by: 34
Author(s): Andrian Yang, Michael Troup, Joshua W. K. Ho
Software Mentions: 2
Published: almost 8 years ago

10.1002/brb3.579

<scp>fMRI</scp> functional connectivity of the periaqueductal gray in <scp>PTSD</scp> and its dissociative subtype
Cited by: 85
Author(s): Sherain Harricharan, Daniela Rabellino, Paul A. Frewen, Maria Densmore, Jean Théberge, Margaret C. McKinnon, Allan N. Schore, Ruth A. Lanius
Software Mentions: 2
Published: about 8 years ago

10.1186/s12859-015-0502-7

SCNVSim: somatic copy number variation and structure variation simulator
Cited by: 29
Author(s): Maochun Qin, Biao Liu, Jeffrey M. Conroy, Carl Morrison, Qiang Hu, Yijun Cheng, Mitsuko Murakami, Adekunle Odunsi, Candace S. Johnson, Lei Wei, Song Liu, Jianmin Wang
Software Mentions: 2
Published: over 9 years ago

10.1080/19396368.2019.1625085

Can trophectoderm RNA analysis predict human blastocyst competency?
Cited by: 16
Author(s): Panagiotis Ntostis, Georgia Kokkali, David Iles, John Huntriss, Maria Tzetis, Helen M. Picton, Konstantinos Pantos, D. H. Miller
Software Mentions: 2
Published: over 5 years ago

10.3389/fnagi.2021.721171

Amyloid-Beta Influences Memory via Functional Connectivity During Memory Retrieval in Alzheimer's Disease
Cited by: 3
Author(s): Binyin Li, Miao Zhang, Ikbeom Jang, Guanyu Ye, Liche Zhou, Guoping He, Xiaozhu Lin, Hongping Meng, Xin‐Yun Huang, Wangxi Hai, Shengdi Chen, Jun Li
Software Mentions: 2
Published: about 3 years ago

10.1186/s12859-016-1397-7

acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data
Cited by: 18
Author(s): Markus Lux, Jan Walters Kruger, Christian Rinke, Irena Maus, Andreas Schlüter, Tanja Woyke, Alexander Sczyrba, Barbara Hammer
Software Mentions: 2
Published: almost 8 years ago

10.1128/mSystems.00920-20

phyloFlash: Rapid Small-Subunit rRNA Profiling and Targeted Assembly from Metagenomes
Cited by: 156
Author(s): Harald R. Gruber‐Vodicka, Brandon K. B. Seah, Elmar Pruesse
Software Mentions: 2
Published: about 4 years ago

10.1186/s12915-020-0748-z

Contaminant DNA in bacterial sequencing experiments is a major source of false genetic variability
Cited by: 45
Author(s): Galo A. Goig, Silvia Blanco, Alberto L. García‐Basteiro, Iñaki Comas
Software Mentions: 2
Published: over 4 years ago

10.1186/1471-2105-15-182

Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads
Cited by: 991
Author(s): Hongshan Jiang, Rong Lei, Shou‐Wei Ding, Shuifang Zhu
Software Mentions: 2
Published: over 10 years ago

10.1186/s12864-016-3444-1

Discovery of large genomic inversions using long range information
Cited by: 15
Author(s): Marzieh Eslami Rasekh, Giorgia Chiatante, Mattia Miroballo, Joyce Tang, Mario Ventura, Chris T. Amemiya, Evan E. Eichler, Francesca Antonacci, Can Alkan
Software Mentions: 2
Published: almost 8 years ago

10.3390/ijerph15112358

Window View and the Brain: Effects of Floor Level and Green Cover on the Alpha and Beta Rhythms in a Passive Exposure EEG Experiment
Cited by: 27
Author(s): Agnieszka Olszewska-Guizzo, Nicolas Escoffier, Jane W. Chan, Tan Puay Yok
Software Mentions: 2
Published: about 6 years ago

10.3389/fendo.2019.00917

Validation of ART Calculator for Predicting the Number of Metaphase II Oocytes Required for Obtaining at Least One Euploid Blastocyst for Transfer in Couples Undergoing in vitro Fertilization/Intracytoplasmic Sperm Injection
Cited by: 23
Author(s): Sandro C. Esteves, Hakan Yaralı́, Filippo Maria Ubaldi, José Ferreira de Carvalho, Fabiola C. Bento, Alberto Vaiarelli, Danilo Cimadomo, Irem Yarali Ozbek, Mehtap Polat, Gürkan Bozdağ, Laura Rienzi, Carlo Alviggi
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijerph16142629

Attention Restoration Space on a University Campus: Exploring Restorative Campus Design Based on Environmental Preferences of Students
Cited by: 27
Author(s): Lu Ming, Jingwan Fu
Software Mentions: 2
Published: over 5 years ago

10.3390/ijerph16152764

How to Obtain a Reliable Estimate of Occupational Exposure? Review and Discussion of Models’ Reliability
Cited by: 15
Author(s): Andrea Spinazzè, Francesca Borghi, Davide Campagnolo, Sabrina Rovelli, Marta Keller, Giacomo Fanti, Andrea Cattaneo, Domenico Maria Cavallo
Software Mentions: 2
Published: over 5 years ago

10.1099/mgen.0.000398

Platon: identification and characterization of bacterial plasmid contigs in short-read draft assemblies exploiting protein sequence-based replicon distribution scores
Cited by: 74
Author(s): Oliver Schwengers, Patrick Barth, Linda Falgenhauer, Torsten Hain, Trinad Chakraborty, Alexander Goesmann
Software Mentions: 2
Published: about 4 years ago

10.3390/ijerph17020383

Exposure Models for REACH and Occupational Safety and Health Regulations
Cited by: 18
Author(s): John W. Cherrie, Wouter Fransman, G.A.H. Heussen, Dorothea Koppisch, Keld Alstrup Jensen
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijerph17124589

Validity of Tier 1 Modelling Tools and Impacts on Exposure Assessments within REACH Registrations—ETEAM Project, Validation Studies and Consequences
Cited by: 7
Author(s): Urs Schlüter, Martin Tischer
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2020.603093

Detection of Pathogenic Microbe Composition Using Next-Generation Sequencing Data
Cited by: 0
Author(s): Huijing Zhao, Shuang Wang, Xiguo Yuan
Software Mentions: 2
Published: almost 4 years ago

10.3389/fgene.2019.01051

Detecting Weak Signals by Combining Small P-Values in Genetic Association Studies
Cited by: 5
Author(s): Olga A. Vsevolozhskaya, Fengjiao Hu, Dmitri V. Zaykin
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2020.00458

Accurate Inference of Tumor Purity and Absolute Copy Numbers From High-Throughput Sequencing Data
Cited by: 7
Author(s): Xiguo Yuan, Zhe Li, Huijing Zhao, Jun Bai, Junying Zhang
Software Mentions: 2
Published: over 4 years ago

10.3389/fnhum.2017.00364

Transcranial Electric Stimulation Can Impair Gains during Working Memory Training and Affects the Resting State Connectivity
Cited by: 18
Author(s): Annie Möller, Federico Nemmi, Kim Karlsson, Torkel Klingberg
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.45045

Task-induced functional brain connectivity mediates the relationship between striatal D2/3 receptors and working memory
Cited by: 15
Author(s): Matthew M. Nour, Tarik Dahoun, Robert McCutcheon, Rick A. Adams, Matthew B. Wall, Oliver Howes
Software Mentions: 2
Published: over 5 years ago

10.7554/eLife.58609

Reshaping of bacterial molecular hydrogen metabolism contributes to the outgrowth of commensal E. coli during gut inflammation
Cited by: 8
Author(s): Elizabeth R. Hughes, Maria G. Winter, Laice Alves da Silva, Matthew K. Muramatsu, Angel G. Jimenez, Caroline C. Gillis, Luisella Spiga, Rachael B. Chanin, Renato Lima Santos, Wenhan Zhu, Sebastian Winter
Software Mentions: 2
Published: over 3 years ago

10.1523/JNEUROSCI.3213-16.2017

Constant Light Desynchronizes Olfactory versus Object and Visuospatial Recognition Memory Performance
Cited by: 12
Author(s): Shu K. E. Tam, Sibah Hasan, Harry M. C. Choi, L. M. Brown, Aarti Jagannath, Steven Hughes, Mark W. Hankins, Russell G. Foster, Vladyslav V. Vyazovskiy, David M. Bannerman, Stuart N. Peirson
Software Mentions: 2
Published: over 7 years ago

10.3389/fnhum.2020.00204

Differential Functional Connectivity in Anterior and Posterior Hippocampus Supporting the Development of Memory Formation
Cited by: 28
Author(s): Lingfei Tang, Patrick Pruitt, Qijing Yu, Roya Homayouni, Ana M. Daugherty, Jessica S. Damoiseaux, Noa Ofen
Software Mentions: 2
Published: over 4 years ago

10.1186/1744-8603-7-41

The increasing chronicity of HIV in sub-Saharan Africa: Re-thinking "HIV as a long-wave event" in the era of widespread access to ART
Cited by: 56
Author(s): Stephanie Nixon, Jill Hanass-Hancock, Alan Whiteside, Tony Barnett
Software Mentions: 1
Published: almost 14 years ago

10.3390/healthcare6020064

“That Guy, Is He Really Sick at All?” An Analysis of How Veterans with PTSD Experience Nature-Based Therapy
Cited by: 14
Author(s): Dorthe Varning Poulsen, Ulrika K. Stigsdotter, Annette Sofie Davidsen
Software Mentions: 1
Published: over 6 years ago

10.1002/hbm.23541

Cerebellar lobules and dentate nuclei mirror cortical force-related-BOLD responses: Beyond all (linear) expectations
Cited by: 14
Author(s): Adnan A.S. Alahmadi, Matteo Pardini, R Samson, Karl J. Friston, Ahmed Toosy, Egidio D’Angelo, C Wheeler-Kingshott
Software Mentions: 1
Published: over 7 years ago

10.1002/hbm.25276

Multimodal <scp>MRI</scp> assessment for first episode psychosis: A major change in the thalamus and an efficient stratification of a subgroup
Cited by: 17
Author(s): Andréia V. Faria, Yi Zhao, Chenfei Ye, Johnny Hsu, Kun Yang, Elizabeth Cifuentes, Lei Wang, Susumu Mori, Michael Miller, Brian Caffo, Akira Sawa
Software Mentions: 1
Published: almost 4 years ago

10.1002/hbm.24839

Hubs disruption in mesial temporal lobe epilepsy. A resting‐state fMRI study on a language‐and‐memory network
Cited by: 31
Author(s): Elise Roger, Cédric Pichat, Laurent Torlay, Olivier David, Felix Rénard, Sonja Banjac, Arnaud Attyé, Lorella Minotti, Laurent Lamalle, Philippe Kahane, Monica Baciu
Software Mentions: 1
Published: about 5 years ago

10.1002/hbm.24898

The buildup of an urge in obsessive–compulsive disorder: Behavioral and neuroimaging correlates
Cited by: 9
Author(s): Emily Stern, Carina Brown, Molly Ludlow, Rebbia Shahab, Katherine A. Collins, Alexis Lieval, Russell H. Tobe, Dan V. Iosifescu, Katherine E. Burdick, Lazar Fleysher
Software Mentions: 1
Published: almost 5 years ago

10.1186/1748-5908-7-101

The ASTUTE Health study protocol: Deliberative stakeholder engagements to inform implementation approaches to healthcare disinvestment
Cited by: 49
Author(s): Amber M. Watt, Janet E. Hiller, Annette Braunack-Mayer, John Moss, Heather Buchan, Janet Wale, Dagmara Riitano, Katherine Hodgetts, Jackie Street, Adam G Elshaug
Software Mentions: 1
Published: about 12 years ago

10.5935/1518-0557.20200100

The POSEIDON stratification - moving from poor ovarian response to low prognosis
Cited by: 6
Author(s): Matheus Roque, Thor Haahr, Sandro C. Esteves, Peter Humaıdan
Software Mentions: 1
Published: almost 4 years ago

10.1002/acm2.12019

Online dosimetric evaluation of larynx SBRT: A pilot study to assess the necessity of adaptive replanning
Cited by: 4
Author(s): Weihua Mao, Timothy Rozario, Weiguo Lu, Xuejun Gu, Yulong Yan, Xun Jia, Baran D. Sumer, David L. Schwartz
Software Mentions: 1
Published: almost 8 years ago

10.1002/acm2.12246

Quantitative evaluation of the performance of different deformable image registration algorithms in helical, axial, and cone-beam CT images using a mobile phantom
Cited by: 3
Author(s): I Ali, Nesreen Alsbou, J Jaskowiak, Salahuddin Ahmad
Software Mentions: 1
Published: almost 7 years ago

10.1002/acm2.12361

The impact of robustness of deformable image registration on contour propagation and dose accumulation for head and neck adaptive radiotherapy
Cited by: 26
Author(s): Lian Zhang, Wang Zhi, Chengyu Shi, Tao Long, X. George Xu
Software Mentions: 1
Published: over 6 years ago

10.1002/acm2.12498

Direct comparison between surface imaging and orthogonal radiographic imaging for <scp>SRS</scp> localization in phantom
Cited by: 18
Author(s): D Wiant, Han Liu, T Hayes, Qingyang Shang, Sasa Mutic, B Sintay
Software Mentions: 1
Published: almost 6 years ago

10.1186/1532-429X-15-S1-E34

Cardiac cine with ART for radial parallel imaging reconstruction
Cited by: 0
Author(s): Shu Li, Gigi Galiana, Leo Tam, Sebastian Kozerke, Jason P. Stockmann, R. Todd Constable, Dana C Peters
Software Mentions: 1
Published: almost 12 years ago

10.3390/jcm9030834

Correlates of Normal and Abnormal General Movements in Infancy and Long-Term Neurodevelopment of Preterm Infants: Insights from Functional Connectivity Studies at Term Equivalence
Cited by: 16
Author(s): Colleen Peyton, Christa Einspieler, Toril Fjørtoft, Lars Adde, Michael D. Schreiber, Alexander Drobyshevsky, Jeremy D. Marks
Software Mentions: 1
Published: over 4 years ago

10.3390/jcm9103198

Resting-State Functional Connectivity and Scholastic Performance in Preadolescent Children: A Data-Driven Multivoxel Pattern Analysis (MVPA)
Cited by: 10
Author(s): Daniel R. Westfall, Sheeba Arnold Anteraper, Laura Chaddock-Heyman, Eric S. Drollette, Lauren B. Raine, Susan Whitfield‐Gabrieli, Arthur F. Kramer, Charles H. Hillman
Software Mentions: 1
Published: about 4 years ago

10.1128/JCM.02574-14

Whole-Genome Sequencing Confirms that Burkholderia pseudomallei Multilocus Sequence Types Common to Both Cambodia and Australia Are Due to Homoplasy
Cited by: 42
Author(s): Birgit De Smet, Derek S. Sarovich, Erin P. Price, Mark Mayo, Vanessa Theobald, Chun Kham, Seiha Heng, Thong Phe, Matthew T. G. Holden, Julian Parkhill, Sharon J. Peacock, Brian G. Spratt, Jan Jacobs, Peter Vandamme, Bart J. Currie
Software Mentions: 1
Published: almost 10 years ago

10.1128/JCM.00466-19

Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated <i>In Silico</i> High-Throughput Sequencing Data Sets
Cited by: 31
Author(s): Annika Brinkmann, Andreas Andrusch, Ariane Belka, Claudia Wylezich, Dirk W. Höper, Anne Pohlmann, Thomas Nordahl Petersen, Pierrick Lucas, Yannick Blanchard, Anna Papa, Angeliki Melidou, Bas B. Oude Munnink, Jelle Matthijnssens, Ward Deboutte, Richard J. Ellis, Florian Hansmann, Wolfgang Baumgärtner, Erhard van der Vries, Albert D. M. E. Osterhaus, Cesare Cammà, Iolanda Mangone, Alessio Lorusso, Maurilia Marcacci, Baltazar Nunes, Miguel Pinto, Vítor Borges, Annelies Kroneman, Dennis Schmitz, Victor M. Corman, Christian Drosten, Terry C. Jones, René S. Hendriksen, Frank Møller Aarestrup, Marion Koopmans, Martin Beer, Andreas Nitsche
Software Mentions: 1
Published: over 5 years ago

10.1186/1746-4269-4-16

Alternative medicines for AIDS in resource-poor settings: Insights from exploratory anthropological studies in Asia and Africa
Cited by: 21
Author(s): Anita Hardon, Alice Desclaux, Marc Egrot, Emmanuelle Simon, Évelyne Micollier, Margaret Kyakuwa
Software Mentions: 1
Published: over 16 years ago

10.1017/S0033291716001604

Altered resting-state functional connectivity in emotion-processing brain regions in adults who were born very preterm
Cited by: 31
Author(s): Chiara Papini, Thomas P. White, Anita Montagna, Philip J. Brittain, Seán Froudist-Walsh, Jasmin Kroll, Vyacheslav Karolis, Alessandra Simonelli, Steven Williams, Robin M. Murray, Chiara Nosarti
Software Mentions: 1
Published: over 8 years ago

10.1017/S0033291716002567

A novel resting-state functional magnetic resonance imaging signature of resilience to recurrent depression
Cited by: 20
Author(s): Clifford I. Workman, Karen E. Lythe, Shane McKie, Jorge Moll, Jennifer A Gethin, Bill Deakin, Richard M. Elliott, Roland Zahn
Software Mentions: 1
Published: about 8 years ago

10.1186/1748-717X-7-90

A multi-institution evaluation of deformable image registration algorithms for automatic organ delineation in adaptive head and neck radiotherapy
Cited by: 70
Author(s): Nicholas Hardcastle, Wolfgang A. Tomé, Donald M. Cannon, Charlotte L. Brouwer, P.W.H. Wittendorp, Nesrin Dogan, Matthias Gückenberger, Stéphane Allaire, Yogish Mallya, Prashant Kumar, Markus Oechsner, Anne Richter, Shiyu Song, Michael J. Myers, Bülent Polat, Karl Bzdusek
Software Mentions: 1
Published: over 12 years ago

10.1186/1748-717X-9-19

Impact of body-mass factors on setup displacement in patients with head and neck cancer treated with radiotherapy using daily on-line image guidance
Cited by: 17
Author(s): Yung-Chih Lai, Shih Neng Yang, Ji An Liang, Yao Ching Wang, Chun Yen Yu, Ching Hsiung Su, Shang-Wen Chen
Software Mentions: 1
Published: almost 11 years ago

10.1186/s13014-016-0650-6

A Nomogram to predict parotid gland overdose in head and neck IMRT
Cited by: 22
Author(s): J. Castelli, Jean‐Marc Simon, B. Rigaud, C. Lafond, E. Chajón, Juan David Ospina, Pascal Haigron, Brigitte Laguerre, Antoine Loubière, Karen Bénézery, R. de Crevoisier
Software Mentions: 1
Published: over 8 years ago

10.1016/j.radonc.2020.06.017

Patterns of practice for adaptive and real-time radiation therapy (POP-ART RT) part II: Offline and online plan adaption for interfractional changes
Cited by: 43
Author(s): Jenny Bertholet, Gail Anastasi, D. Noble, Arjan Bel, R. Van Leeuwen, Toon Roggen, Michaël Duchateau, Sara Pilskog, Cristina Garibaldi, Nina Tilly, Rafael García-Mollá, J. Bonaque, Uwe Oelfke, Marianne C. Aznar, B. Heijmen
Software Mentions: 1
Published: almost 4 years ago

10.1016/j.radonc.2020.06.018

Patterns of practice for adaptive and real-time radiation therapy (POP-ART RT) part I: Intra-fraction breathing motion management
Cited by: 28
Author(s): Gail Anastasi, Jenny Bertholet, Per Rugaard Poulsen, Toon Roggen, Cristina Garibaldi, Nina Tilly, Jeremy Booth, Uwe Oelfke, B. Heijmen, Marianne C. Aznar
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12958-016-0216-3

Variation in male spermiation response to exogenous hormones among divergent populations of Red-eyed Treefrogs
Cited by: 5
Author(s): Leah E. Jacobs, Jeanne M. Robertson, Kristine Kaiser
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12958-018-0323-4

Role of L-carnitine in female infertility
Cited by: 54
Author(s): Ashok Agarwal, Pallav Sengupta, Damayanthi Durairajanayagam
Software Mentions: 1
Published: almost 7 years ago

10.1186/1742-4690-6-54

Multiple-infection and recombination in HIV-1 within a longitudinal cohort of women
Cited by: 38
Author(s): Alan R. Templeton, Melissa G. Kramer, Joseph P. Jarvis, Jeanne Kowalski, Stephen J. Gange, Michael Schneider, Qiujia Shao, Guang Wen Zhang, Mei Fen Yeh, Hua Ling Tsai, Hong Zhang, Richard B. Markham
Software Mentions: 1
Published: over 15 years ago

10.1093/schbul/sby016.345

T69. PERFORMANCE OF PATIENTS WITH NMDAR-AB ENCEPHALITIS COMPARED TO PATIENTS WITH SCHIZOPHRENIA AND HEALTHY CONTROLS USING FUNCTIONAL MAGNETIC RESONANCE IMAGING (F-MRI) AND A WORKING MEMORY PARADIGM
Cited by: 0
Author(s): Eric Kelleher, David Mothersill, April Hargreaves, Angela Vincent, Gary Donohoe, Aiden Corvin
Software Mentions: 1
Published: over 6 years ago

10.1038/srep27591

Anticipatory Manoeuvres in Bird Flight
Cited by: 14
Author(s): Hong D. Vo, Ingo Schiffner, Mandyam V. Srinivasan
Software Mentions: 1
Published: over 8 years ago

10.1038/srep35514

Colocalization of cerebral iron with Amyloid beta in Mild Cognitive Impairment
Cited by: 131
Author(s): Jiri M.G. Van Bergen, Li Xu, Jun Hua, Simon J. Schreiner, Stephanie C. Steininger, Frances C. Quevenco, Michael Wyss, Anton Gietl, Valérie Treyer, Sandra E. Leh, Florian M. Buck, Roger M. Nitsch, Klaas P. Pruessmann, Peter C.M. van Zijl, Christoph Höck, Paul G. Unschuld
Software Mentions: 1
Published: about 8 years ago

10.1038/srep35410

Hepatitis C RNA assay differences in results: Potential implications for shortened therapy and determination of Sustained Virologic Response
Cited by: 5
Author(s): Gavin Cloherty, Stéphane Chevaliez, Christoph Sarrazin, Christine Herman, Vera Holzmayer, George J. Dawson, Benjamin Maasoumy, Johannes Vermehren, Heiner Wedemeyer, Jordan J. Feld, Jean‐Michel Pawlotsky
Software Mentions: 1
Published: about 8 years ago

10.1038/srep45273

Mind-wandering and alterations to default mode network connectivity when listening to naturalistic versus artificial sounds
Cited by: 49
Author(s): Cassandra Gould van Praag, Sarah N. Garfinkel, Oli Sparasci, Alex Mees, Andrew Philippides, Mark E. Ware, Cristina Ottaviani, Hugo Critchley
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-02036-0

Scaling of average receiving time on weighted polymer networks with some topological properties
Cited by: 7
Author(s): Dandan Ye, Langzhou Song, Jia Li, Fei Zhang, Han Chang-ling, Wei Chen, Yingze Zhang
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-09847-1

GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging
Cited by: 74
Author(s): Alan Pryor, Yongsoo Yang, Arjun Rana, Marcus Gallagher-Jones, Jihan Zhou, Yuan Hung Lo, Georgian Melinte, Wah Chiu, José A. Rodríguez, Jianwei Miao
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-21896-8

The role of medial prefrontal cortex in the working memory maintenance of one’s own emotional responses
Cited by: 42
Author(s): Ryan Smith, Richard D. Lane, Anna Alkozei, Jennifer Bao, Courtney Smith, Anna Sanova, Matthew Nettles, William D.S. Killgore
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-24453-5

Presence and User Experience in a Virtual Environment under the Influence of Ethanol: An Explorative Study
Cited by: 19
Author(s): Mario Lorenz, Jennifer Brade, Lisa Diamond, Daniel Sjölie, Marc Busch, Manfred Tscheligi, Philipp Klimant, Christoph‐E. Heyde, Niels Hammer
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-28908-7

Whole genome sequencing and phylogenetic analysis of strains of the agent of Lyme disease Borrelia burgdorferi from Canadian emergence zones
Cited by: 22
Author(s): Shaun Tyler, Shari Tyson, Antonia Dibernardo, Michael A. Drebot, Edward J. Feil, Morag Graham, Natalie Knox, L. Robbin Lindsay, Gabriele Margos, Samir Mechai, Gary Van Domselaar, Harry A. Thorpe, N. H. Ogden
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-46962-7

The posterior Cerebellum is involved in constructing Social Action Sequences: An fMRI Study
Cited by: 64
Author(s): Elien Heleven, Kim van Dun, Frank Van Overwalle
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-48242-w

NGSReadsTreatment – A Cuckoo Filter-based Tool for Removing Duplicate Reads in NGS Data
Cited by: 5
Author(s): Antonio Sérgio Cruz Gaia, Pablo Henrique Caracciolo Gomes de Sá, Mônica Silva de Oliveira, Adonney Allan de Oliveira Veras
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-57024-3

Sleep/Wake Regularity Associated with Default Mode Network Structure among Healthy Adolescents and Young Adults
Cited by: 26
Author(s): Jessica R. Lunsford‐Avery, Katherine S.F. Damme, Matthew M. Engelhard, Scott H. Kollins, Vijay A. Mittal
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-59282-y

Emotions and brain function are altered up to one month after a single high dose of psilocybin
Cited by: 139
Author(s): Frederick S. Barrett, Manoj K. Doss, Nathan D. Sepeda, James J. Pekar, Roland R. Griffiths
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-61499-w

Helical tomotherapy: Comparison of Hi-ART and Radixact clinical patient treatments at the Technical University of Munich
Cited by: 25
Author(s): Kim Melanie Kraus, S. Kampfer, Jan J. Wilkens, Lars Schüttrumpf, Stephanie E. Combs
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-93575-0

Renal denervation does not affect hypertension or the renin-angiotensin system in a rodent model of juvenile-onset polycystic kidney disease: clinical implications
Cited by: 6
Author(s): Sheran Li, Cara M. Hildreth, Ahmed A. Rahman, Sean A. Barton, Benjamin F. Wyse, Chai K. Lim, Paul M. Pilowsky, Jacqueline K. Phillips
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-95311-0

Motivational system modulates brain responses during exploratory decision-making
Cited by: 1
Author(s): Chia-Wei Li, Carol Yeh‐Yun Lin, Ting‐Ting Chang, Nai‐Shing Yen, Danchi Tan
Software Mentions: 1
Published: over 3 years ago

10.1155/2013/145198

Sparse-Coding-Based Computed Tomography Image Reconstruction
Cited by: 1
Author(s): Sang Min Yoon, Gangjoon Yoon
Software Mentions: 1
Published: almost 12 years ago

10.3390/s110504875

A Survey of System Architecture Requirements for Health Care-Based Wireless Sensor Networks
Cited by: 77
Author(s): Emeka E. Egbogah, Abraham O. Fapojuwo
Software Mentions: 1
Published: over 13 years ago

10.3390/s151024735

ResilientWireless Sensor Networks Using Topology Control: A Review
Cited by: 18
Author(s): Yuanjiang Huang, José-Fernán Martínez-Ortega, J. Rafael Sendra, Lourdes López
Software Mentions: 1
Published: about 9 years ago

10.3390/s16101673

I-AUV Docking and Panel Intervention at Sea
Cited by: 24
Author(s): Narcís Palomeras, Antonio Peñalver, Miquel Massot-Campos, Pep Lluís Negre, Julio César Ramos Fernández, Pere Ridao, Pedro J. Sanz, Gabriel Oliver-Codina
Software Mentions: 1
Published: about 8 years ago

10.3390/s17092084

Dynamic Reconstruction Algorithm of Three-Dimensional Temperature Field Measurement by Acoustic Tomography
Cited by: 20
Author(s): Yanqiu Li, Liwei Shi, Schlaberg H Inaki
Software Mentions: 1
Published: about 7 years ago

10.3390/s21041058

Anonymous Asynchronous Ratchet Tree Protocol for Group Messaging
Cited by: 0
Author(s): Kaiming Chen, Jiageng Chen, Jixin Zhang
Software Mentions: 1
Published: almost 4 years ago

10.1093/scan/nsz061

Neural substrates for anticipation and consumption of social and monetary incentives in depression
Cited by: 24
Author(s): Zhenhong He, Dandan Zhang, Nils Muhlert, Richard M. Elliott
Software Mentions: 1
Published: over 5 years ago

10.1186/s13287-021-02580-7

Human pluripotent stem cell-derived cartilaginous organoids promote scaffold-free healing of critical size long bone defects
Cited by: 27
Author(s): Wai Long Tam, Luís Mendes, Xike Chen, Raphaëlle Lesage, Inge Van Hoven, Elke Leysen, Greet Kerckhofs, Kathleen Bosmans, Yoke Chin Chai, Akihiro Yamashita, Noriyuki Tsumaki, Liesbet Geris, Simon C. Roberts, Frank P. Luyten
Software Mentions: 1
Published: about 3 years ago

10.3390/toxics9090201

Evaluation of One- and Two-Box Models as Particle Exposure Prediction Tools at Industrial Scale
Cited by: 2
Author(s): Carla Ribalta, Ana López-Lilao, Ana Sofia Fonseca, Alexander C. Ø. Jensen, Keld Alstrup Jensen, E. Monfort, Mar Viana
Software Mentions: 1
Published: about 3 years ago

Projects: cran: ART

Papers Mentioning ART 580