Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ANTs

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ANTs

Animal Network Toolkit Software
5 versions
Latest release: almost 2 years ago
304 downloads last month

Papers Mentioning ANTs 393

10.1038/s41598-017-09915-6
Mapping White Matter Microstructure in the One Month Human Brain
Cited by: 53
Author(s): Douglas C. Dean, Elizabeth M. Planalp, William Wooten, Nagesh Adluru, Steven Kecskemeti, Corrina Frye, Cory K. Schmidt, Nicole L. Schmidt, Martin Styner, H. Hill Goldsmith, Richard J. Davidson, Andrew L. Alexander
Software Mentions: 1
Published: almost 7 years ago
10.1007/s10334-019-00782-y
Image registration in dynamic renal MRI—current status and prospects
Cited by: 16
Author(s): Frank G. Zöllner, Amira Šerifović-Trbalić, Gordian Kabelitz, Marek Kociński, Andrzej Materka, Peter Rogelj
Software Mentions: 1
Published: over 4 years ago
10.1038/s41398-021-01274-1
Exposure to maternal high-fat diet induces extensive changes in the brain of adult offspring
Cited by: 22
Author(s): Darren Fernandes, Shoshana Spring, Anna Roy, Lily R. Qiu, Yohan Yee, Brian J. Nieman, Jason P. Lerch, Mark R. Palmert
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-018-19420-z
The Direction of Tumour Growth in Glioblastoma Patients
Cited by: 44
Author(s): Morteza Esmaeili, Anne Line Stensjøen, Erik Magnus Berntsen, Ole Solheim, Ingerid Reinertsen
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-018-19993-9
Physical Exercise and Spatial Training: A Longitudinal Study of Effects on Cognition, Growth Factors, and Hippocampal Plasticity
Cited by: 18
Author(s): Luise Woost, Pierre-Louis Bazin, Marco Taubert, Robert Trampel, Christine Tardif, Alexander Garthe, Gerd Kempermann, Ulrich Renner, Günter Stalla, Derek V. M. Ott, Viola Rjosk, Hellmuth Obrig, Arno Villringer, Elisabeth Roggenhofer, Tilmann A. Klein
Software Mentions: 1
Published: about 6 years ago
10.1155/2017/3457189
Evaluation of Deformable Image Registration for Three-Dimensional Temporal Subtraction of Chest Computed Tomography Images
Cited by: 3
Author(s): Ping Yan, Yoshie Kodera, Kazuhiro Shimamoto
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-018-27839-7
Chemical exchange saturation transfer MRI shows low cerebral 2-deoxy-D-glucose uptake in a model of Alzheimer’s Disease
Cited by: 29
Author(s): Daniele Tolomeo, Edoardo Micotti, Sonia Colombo Serra, Michael A. Chappell, Anniina Snellman, Gianluigi Forloni
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-018-28766-3
Increasing isoflurane dose reduces homotopic correlation and functional segregation of brain networks in mice as revealed by resting-state fMRI
Cited by: 29
Author(s): Qasim Bukhari, Aileen Schroeter, Markus Rudin
Software Mentions: 1
Published: almost 6 years ago
10.1111/desc.12747
Remapping the cognitive and neural profiles of children who struggle at school
Cited by: 59
Author(s): Duncan E. Astle, Joe Bathelt, Joni Holmes
Software Mentions: 1
Published: over 5 years ago
10.3390/diagnostics11040686
The Prognostic Value of White-Matter Selective Double Inversion Recovery MRI Sequence in Multiple Sclerosis: An Exploratory Study
Cited by: 0
Author(s): Francesco Crescenzo, Damiano Marastoni, Anna Isabella Pisani, Agnese Tamanti, Caterina Dapor, A Colombi, Alessandro Brillo, Roberta Magliozzi, Francesca Pizzini, Marco Castellaro, Massimiliano Calabrese
Software Mentions: 1
Published: about 3 years ago
10.1016/j.dcn.2019.100706
Identifying reproducible individual differences in childhood functional brain networks: An ABCD study
Cited by: 79
Author(s): Scott Marek, Brenden Tervo‐Clemmens, Ashley N. Nielsen, Muriah D. Wheelock, Ruth H. Miller, Timothy O. Laumann, Eric Earl, Will Foran, Michaela Cordova, Olivia Doyle, Anders Perrone, Óscar Miranda-Domínguez, Eric Feczko, Darrick Sturgeon, Alice M. Graham, Robert Hermosillo, Kathy Snider, Anthony Galassi, Bonnie J. Nagel, Sarah W. Feldstein Ewing, Adam T. Eggebrecht, Hugh Garavan, Anders M. Dale, Deanna J. Greene, M Deanna, Damien A. Fair, Beatríz Luna, Nico U.F. Dosenbach
Software Mentions: 1
Published: over 4 years ago
10.3390/diagnostics10110963
Consistent Cerebral Blood Flow Covariance Networks across Healthy Individuals and Their Similarity with Resting State Networks and Vascular Territories
Cited by: 4
Author(s): Alice Pirastru, Laura Pelizzari, Niels Bergsland, Marta Cazzoli, Pietro Cecconi, Francesca Baglio, Maria Marcella Laganà
Software Mentions: 1
Published: over 3 years ago
10.1523/ENEURO.0290-19.2020
Resting State BOLD Variability of the Posterior Medial Temporal Lobe Correlates with Cognitive Performance in Older Adults with and without Risk for Cognitive Decline
Cited by: 17
Author(s): Tyler J. Good, Joshua W. Villafuerte, Jennifer D. Ryan, Cheryl L. Grady, Morgan D. Barense
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-018-33839-4
Feasibility of identifying the ideal locations for motor intention decoding using unimodal and multimodal classification at 7T-fMRI
Cited by: 4
Author(s): Peter E. Yoo, Thomas J. Oxley, Sam E. John, Nicholas L. Opie, Roger J. Ordidge, Terence J. O’Brien, Maureen A. Hagan, Yan T. Wong, Bradford A. Moffat
Software Mentions: 1
Published: over 5 years ago
10.15252/emmm.201707809
<sup>18</sup>F‐AV‐1451 and CSF T‐tau and P‐tau as biomarkers in Alzheimer's disease
Cited by: 150
Author(s): Niklas Mattsson, Michael Schöll, Olof Strandberg, Ruben Smith, Sebastian Palmqvist, Philip S. Insel, Douglas Hägerström, Tomas Ohlsson, Henrik Zetterberg, Jonas Jögi, Kaj Blennow, Oskar Hansson
Software Mentions: 1
Published: almost 7 years ago
10.1007/s00259-019-04677-x
Imaging glioma biology: spatial comparison of amino acid PET, amide proton transfer, and perfusion-weighted MRI in newly diagnosed gliomas
Cited by: 31
Author(s): Simon Schön, Jorge Cabello, Friederike Liesche‐Starnecker, Miguel Molina-Romero, Paul Eichinger, Marie Metz, И. А. Каримов, Christine Preibisch, Jochen Keupp, A. Höck, Bernhard Meyer, Wolfgang Weber, Claus Zimmer, Thomas Pyka, Igor Yakushev, Jens Gempt, Benedikt Wiestler
Software Mentions: 1
Published: over 4 years ago
10.1007/s00330-020-07297-4
MGMT methylation may benefit overall survival in patients with moderately vascularized glioblastomas
Cited by: 14
Author(s): Elies Fuster-García, David Lorente-Estellés, María del Mar Álvarez‐Torres, Javier Juan–Albarracín, Eduard Chelebian, Àlex Rovira, C. Auger Acosta, José Pineda, Laura Oleaga, Enrique Mollá-Olmos, Silvano Filice, Paulina Due‐Tønnessen, Torstein R. Meling, Kyrre E. Emblem, Juan Miguel García‐Gómez
Software Mentions: 1
Published: over 3 years ago
10.1016/j.cub.2019.04.064
Nucleus Isthmi Is Required to Sustain Target Pursuit during Visually Guided Prey-Catching
Cited by: 47
Author(s): Pedro M. Henriques, Niloy Rahman, Samuel E. Jackson, Isaac H. Bianco
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-018-34848-z
Quantitative morphometric analysis of adult teleost fish by X-ray computed tomography
Cited by: 27
Author(s): Venera Weinhardt, Roman Shkarin, Tobias Wernet, Joachim Wittbrodt, Tilo Baumbach, Felix Loosli
Software Mentions: 1
Published: over 5 years ago
10.3389/fnagi.2019.00213
Resting State Networks in the TgF344-AD Rat Model of Alzheimer’s Disease Are Altered From Early Stages
Cited by: 11
Author(s): Raúl Tudela, Emma Muñoz‐Moreno, Roser Sala‐Llonch, Xavier López-Gil, Guadalupe Sòria
Software Mentions: 1
Published: almost 5 years ago
10.3389/fnagi.2019.00264
Anodal Transcranial Direct Current Stimulation Over S1 Differentially Modulates Proprioceptive Accuracy in Young and Old Adults
Cited by: 11
Author(s): Toni Muffel, Franziska Kirsch, Po-Hsin Shih, Benjamin Kalloch, Sara Schaumberg, Arno Villringer, Bernhard Sehm
Software Mentions: 1
Published: over 4 years ago
10.3389/fnagi.2016.00063
Cortical Thinning in Healthy Aging Correlates with Larger Motor-Evoked EEG Desynchronization
Cited by: 10
Author(s): David Provencher, Marie Hennebelle, Stephen C. Cunnane, Yves Bérubé-Lauzière, Kevin Whittingstall
Software Mentions: 1
Published: about 8 years ago
10.3389/fnagi.2021.688113
Morphological, Structural, and Functional Networks Highlight the Role of the Cortical-Subcortical Circuit in Individuals With Subjective Cognitive Decline
Cited by: 9
Author(s): Xin Xu, Tao Wang, Weikai Li, Hai Li, Boyan Xu, Min Zhang, Ling Yue, Peijun Wang, Shifu Xiao
Software Mentions: 1
Published: almost 3 years ago
10.1038/s41598-018-37615-2
Mass Effect Deformation Heterogeneity (MEDH) on Gadolinium-contrast T1-weighted MRI is associated with decreased survival in patients with right cerebral hemisphere Glioblastoma: A feasibility study
Cited by: 15
Author(s): Prateek Prasanna, Jhimli Mitra, Niha Beig, Ameya Nayate, Jay Patel, Soumya Ghose, Rajat Thawani, Sasan Partovi, Anant Madabhushi, Pallavi Tiwari
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-019-38506-w
Diattenuation Imaging reveals different brain tissue properties
Cited by: 27
Author(s): Miriam Menzel, Markus Axer, Katrin Amunts, Hans De Raedt, K. Michielsen
Software Mentions: 1
Published: over 5 years ago
10.3389/fnagi.2019.00067
Loss of Parietal Memory Network Integrity in Alzheimer’s Disease
Cited by: 10
Author(s): Yang Hu, Wenying Du, Yiwen Zhang, Ningning Li, Ying Han, Zhi Yang
Software Mentions: 1
Published: about 5 years ago
10.1038/s42003-021-02268-x
Inter-individual body mass variations relate to fractionated functional brain hierarchies
Cited by: 18
Author(s): Bo‐yong Park, Hyunjin Park, Filip Morys, Mansu Kim, Kyoungseob Byeon, Hyebin Lee, Se‐Hong Kim, Sofie L. Valk, Alain Dagher, Boris C. Bernhardt
Software Mentions: 1
Published: almost 3 years ago
10.3389/fnagi.2017.00426
Brain Network Modularity Predicts Exercise-Related Executive Function Gains in Older Adults
Cited by: 76
Author(s): Pauline L. Baniqued, Courtney L. Gallen, Michelle W. Voss, Agnieszka Burzyńska, Chelsea N. Wong, Gordon Cooke, Kristin B Duffy, Jason Fanning, Diane K. Ehlers, Elizabeth A. Salerno, Susan Aguiñaga, Edward McAuley, Arthur F. Kramer, Mark D’Esposito
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-019-43341-0
Cortical tissue loss and major structural reorganization as result of distal middle cerebral artery occlusion in the chronic phase of nude mice
Cited by: 6
Author(s): Anuka Minassian, Marina Dobrivojević Radmilović, Stefanie N. Vogel, Michael Diedenhofen, Melanie Nelles, Maren Stoeber, Dirk Wiedermann, Mathias Hoehn
Software Mentions: 1
Published: about 5 years ago
10.3389/fnagi.2021.683783
Altered Spontaneous Brain Activity in Subjects With Different Cognitive States of Biologically Defined Alzheimer's Disease: A Surface-Based Functional Brain Imaging Study
Cited by: 3
Author(s): Zili Zhu, Qingze Zeng, Linghan Kong, Xiao Luo, Kaicheng Li, Xiaopei Xu, Minming Zhang, Peiyu Huang, Yunjun Yang
Software Mentions: 1
Published: almost 3 years ago
10.3390/jimaging6060047
Deep Multimodal Learning for the Diagnosis of Autism Spectrum Disorder
Cited by: 26
Author(s): Michelle Tang, Pradeep Kumar, Hao Chen, Abhinav Shrivastava
Software Mentions: 1
Published: almost 4 years ago
10.1007/s12311-020-01227-2
Replicability, Repeatability, and Long-term Reproducibility of Cerebellar Morphometry
Cited by: 13
Author(s): Peter Sörös, Louise Wölk, Carsten Bantel, Anja U. Bräuer, Frank Klawonn, Karsten Witt
Software Mentions: 1
Published: over 3 years ago
10.3389/fnagi.2019.00270
Free Water in White Matter Differentiates MCI and AD From Control Subjects
Cited by: 46
Author(s): Matthieu Dumont, Maggie Roy, Pierre-Marc Jodoin, Félix C. Morency, Jean‐Christophe Houde, Zhiyong Xie, Cici Bauer, Tarek A. Samad, Koene R. A. Van Dijk, James A. Goodman, Maxime Descoteaux, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 1
Published: over 4 years ago
10.3389/fnbeh.2020.00077
Distinct Neural Correlates Underlie Inhibitory Mechanisms of Motor Inhibition and Motor Imagery Restraint
Cited by: 4
Author(s): Peter E. Yoo, Thomas J. Oxley, Maureen A. Hagan, Sam E. John, Stephen M. Ronayne, Gil S. Rind, Alexander M. Brinded, Nicholas L. Opie, Bradford A. Moffat, Yan T. Wong
Software Mentions: 1
Published: about 4 years ago
10.7554/eLife.59430
Multi-contrast anatomical subcortical structures parcellation
Cited by: 18
Author(s): Pierre‐Louis Bazin, Anneke Alkemade, Martijn J. Mulder, Amanda G. Henry, Birte U. Forstmann
Software Mentions: 1
Published: over 3 years ago
10.3389/fncom.2019.00072
Prediction and Classification of Alzheimer’s Disease Based on Combined Features From Apolipoprotein-E Genotype, Cerebrospinal Fluid, MR, and FDG-PET Imaging Biomarkers
Cited by: 82
Author(s): Yubraj Gupta, Ramesh Kumar Lama, Goo‐Rak Kwon, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 1
Published: over 4 years ago
10.1186/s40644-015-0047-z
Semi-automated segmentation of pre-operative low grade gliomas in magnetic resonance imaging
Cited by: 22
Author(s): Zeynettin Akkus, Jiří Sedlář, Lucie Coufalová, Panagiotis Korfiatis, Timothy L. Kline, Joshua D. Warner, Jay P. Agrawal, Bradley J. Erickson
Software Mentions: 1
Published: almost 9 years ago
10.3389/fnhum.2020.598131
More Than Words: Extra-Sylvian Neuroanatomic Networks Support Indirect Speech Act Comprehension and Discourse in Behavioral Variant Frontotemporal Dementia
Cited by: 4
Author(s): Meghan Healey, Erica Howard, Molly Ungrady, Christopher Olm, Naomi Nevler, David J. Irwin, Murray Grossman
Software Mentions: 1
Published: over 3 years ago
10.7554/eLife.62929
Bundle-specific associations between white matter microstructure and Aβ and tau pathology in preclinical Alzheimer’s disease
Cited by: 17
Author(s): Alexa Pichet Binette, Guillaume Theaud, François Rheault, Maggie Roy, D. Louis Collins, Johannes Levin, Hiroshi Mori, Jae Hong Lee, Martin R. Farlow, Peter R. Schofield, Jasmeer P. Chhatwal, Colin L. Masters, Tammie L.S. Benzinger, John C. Morris, Randall J. Bateman, John C.S. Breitner, Judes Poirier, Julie Gonneaud, Maxime Descoteaux, Sylvia Villeneuve
Software Mentions: 1
Published: about 3 years ago
10.3389/fnhum.2021.641616
Stable Anatomy Detection in Multimodal Imaging Through Sparse Group Regularization: A Comparative Study of Iron Accumulation in the Aging Brain
Cited by: 0
Author(s): Matthew Pietrosanu, Li Zhang, Peter Seres, Ahmed Elkady, Alan H. Wilman, Linglong Kong, Dana Cobzaş
Software Mentions: 1
Published: over 3 years ago
10.3389/fnhum.2015.00611
Apathy in Frontotemporal Degeneration: Neuroanatomical Evidence of Impaired Goal-directed Behavior
Cited by: 51
Author(s): Lauren Massimo, John Powers, Lois K. Evans, Corey T. McMillan, Katya Rascovsky, Paul J. Eslinger, Mary Ersek, David J. Irwin, Murray Grossman
Software Mentions: 1
Published: over 8 years ago
10.1364/BOE.394914
A wide field-of-view, modular, high-density diffuse optical tomography system for minimally constrained three-dimensional functional neuroimaging
Cited by: 14
Author(s): Hubin Zhao, Sabrina Brigadoi, Danial Chitnis, Enrico De Vita, Marco Castellaro, Samuel Powell, Nick Everdell, Robert J. Cooper
Software Mentions: 1
Published: almost 4 years ago
10.3389/fnhum.2016.00117
Pushing the Limits: Cognitive, Affective, and Neural Plasticity Revealed by an Intensive Multifaceted Intervention
Cited by: 12
Author(s): Michael D. Mrazek, Benjamin W. Mooneyham, Kaita L. Mrazek, Jonathan W. Schooler
Software Mentions: 1
Published: about 8 years ago
10.7554/eLife.42687
Brain-wide cellular resolution imaging of Cre transgenic zebrafish lines for functional circuit-mapping
Cited by: 54
Author(s): Kathryn M. Tabor, Gregory D. Marquart, Christopher P. Hurt, Trevor Smith, Alexandra K Geoca, Ashwin A. Bhandiwad, Abhignya Subedi, Jennifer L. Sinclair, Hannah M Rose, Nicholas F. Polys, Harold A. Burgess
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-60520-6
MRI Cross-Modality Image-to-Image Translation
Cited by: 41
Author(s): Qianye Yang, Nannan Li, Zixu Zhao, Xiaolong Fan, Eric Chang, Yan Xu
Software Mentions: 1
Published: over 4 years ago
10.3389/fmed.2021.662233
Multi-Atlas MRI-Based Striatum Segmentation for 123I-FP-CIT SPECT (DAT-SPECT) Compared With the Bolt Method and SPECT-Atlas-Based Segmentation Method Toward the Accurate Diagnosis of Parkinson's Disease/Syndrome
Cited by: 1
Author(s): Koji Sohara, Tetsuro Sekine, Amane Tateno, Sunao Mizumura, Masaya Suda, Takeshi Sakayori, Yoshiro Okubo, Shin‐ichiro Kumita
Software Mentions: 1
Published: about 3 years ago
10.3389/fncir.2021.659557
Visuomotor Adaptation Brain Changes During a Spaceflight Analog With Elevated Carbon Dioxide (CO2): A Pilot Study
Cited by: 16
Author(s): Ana Paula Salazar, Kathleen E. Hupfeld, Jessica Lee, Lauren A. Banker, Grant D. Tays, Nichole E. Beltran, I. S. Kofman, Y. E. De Dios, Edwin Mulder, Jacob J. Bloomberg, Ajitkumar P. Mulavara, Rachael D. Seidler
Software Mentions: 1
Published: almost 3 years ago
10.1186/s40478-021-01193-8
Genetic inactivation of SARM1 axon degeneration pathway improves outcome trajectory after experimental traumatic brain injury based on pathological, radiological, and functional measures
Cited by: 20
Author(s): Donald V. Bradshaw, Andrew K. Knutsen, Alexandru Korotcov, Genevieve M. Sullivan, Kryslaine L. Radomski, Bernard J. Dardzinski, Xiaomei Zi, Dennis P. McDaniel, Regina C. Armstrong
Software Mentions: 1
Published: about 3 years ago
10.3389/fnana.2020.536838
7 Tesla MRI Followed by Histological 3D Reconstructions in Whole-Brain Specimens
Cited by: 19
Author(s): Anneke Alkemade, Kerrin Pine, Evgeniya Kirilina, Max C. Keuken, Martijn J. Mulder, Rawien Balesar, Josephine Maria Groot, Ronald L. A. W. Bleys, Robert Trampel, Nikolaus Weiskopf, Andreas Herrler, Harald E. Möller, Pierre‐Louis Bazin, Birte U. Forstmann
Software Mentions: 1
Published: over 3 years ago
10.1186/s12938-016-0299-2
Evaluations of diffusion tensor image registration based on fiber tractography
Cited by: 15
Author(s): Yi Wang, Yu Shen, Dongyang Liu, Guoqin Li, Zhe Guo, Yangyu Fan, Y. Niu
Software Mentions: 1
Published: over 7 years ago
10.1186/s40644-019-0239-z
Clinical impact of variability on CT radiomics and suggestions for suitable feature selection: a focus on lung cancer
Cited by: 35
Author(s): Seung-Hak Lee, H. Cho, Ho Yun Lee, Hyunjin Park
Software Mentions: 1
Published: almost 5 years ago
10.3389/fnana.2013.00031
Integration of ultra-high field MRI and histology for connectome based research of brain disorders
Cited by: 22
Author(s): Shan Yang, Zhengyi Yang, Karin Fischer, Kai Zhong, Jörg Stadler, Frank Godenschweger, Johann Steiner, Hans‐Jochen Heinze, Hans‐Gert Bernstein, Bernhard Bogerts, Christian Mawrin, David C. Reutens, Oliver Speck, Martin Walter
Software Mentions: 1
Published: over 11 years ago
10.1007/s00429-015-1115-7
Dentatorubrothalamic tract localization with postmortem MR diffusion tractography compared to histological 3D reconstruction
Cited by: 38
Author(s): Jeroen Mollink, Kirsten M van Baarsen, Pieter J. Dederen, Sean Foxley, Karla L. Miller, Saâd Jbabdi, Cornelis H. Slump, Joachim André Grotenhuis, Michiel Kleinnijenhuis, Anne‐Marie van Cappellen van Walsum
Software Mentions: 1
Published: over 8 years ago
10.1093/texcom/tgaa023
The Impact of 6 and 12 Months in Space on Human Brain Structure and Intracranial Fluid Shifts
Cited by: 36
Author(s): Kathleen E. Hupfeld, Heather R. McGregor, Jessica Lee, Nichole E. Beltran, I. S. Kofman, Y. E. De Dios, P. A. Reuter-Lorenz, Roy F. Riascos, Ofer Pasternak, Scott J. Wood, Jacob J. Bloomberg, Ajitkumar P. Mulavara, Rachael D. Seidler, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 1
Published: over 4 years ago
10.1093/texcom/tgab022
Effects of Spaceflight Stressors on Brain Volume, Microstructure, and Intracranial Fluid Distribution
Cited by: 11
Author(s): Jessica Lee, Vincent Koppelmans, Ofer Pasternak, Nichole E. Beltran, I. S. Kofman, Y. E. De Dios, Edwin Mulder, Ajitkumar P. Mulavara, Jacob J. Bloomberg, Rachael D. Seidler
Software Mentions: 1
Published: over 3 years ago
10.3389/fninf.2018.00013
A Statistically Representative Atlas for Mapping Neuronal Circuits in the Drosophila Adult Brain
Cited by: 16
Author(s): Ignacio Arganda‐Carreras, Tudor Manoliu, Nicolas Mazuras, Florian Schulze, Juan Eugenio Iglesias, Katja Bühler, Arnim Jenett, François Rouyer, Philippe Andrey
Software Mentions: 1
Published: about 6 years ago
10.3389/fninf.2021.665560
A Simulation Toolkit for Testing the Sensitivity and Accuracy of Corticometry Pipelines
Cited by: 0
Author(s): Mona Omidyeganeh, Najmeh Khalili-Mahani, Patrick Bermudez, Alison Ross, Claude Lepage, Robert D. Vincent, Seun Jeon, Lindsay B. Lewis, Samir Das, Alex P. Zijdenbos, Pierre Rioux, Reza Adalat, Matthijs C. van Eede, Alan C. Evans
Software Mentions: 1
Published: almost 3 years ago
10.1038/s41598-020-72009-3
Investigating altered brain development in infants with congenital heart disease using tensor-based morphometry
Cited by: 15
Author(s): Isabel H X Ng, Alexandra F Bonthrone, Christopher Kelly, Lucilio Cordero‐Grande, Emer Hughes, Anthony N. Price, Jana Hutter, Suresh Victor, Andreas Schuh, Daniel Rueckert, Joseph V. Hajnal, John Simpson, A. David Edwards, Mary Rutherford, Dafnis Batalle, Serena J. Counsell
Software Mentions: 1
Published: over 3 years ago
10.1093/cercor/bhab072
Brain Basis of Psychopathy in Criminal Offenders and General Population
Cited by: 18
Author(s): Lauri Nummenmaa, Lasse Lukkarinen, Lihua Sun, Vesa Putkinen, Kerttu Seppälä, Tomi Karjalainen, H. Karlsson, Matthew Hudson, Niina Venetjoki, Marja Salomaa, Päivi Rautio, Jussi Hirvonen, Hannu Lauerma, Jari Tiihonen
Software Mentions: 1
Published: about 3 years ago
10.3390/brainsci11080965
Reorganization of the Social Brain in Individuals with Only One Intact Cerebral Hemisphere
Cited by: 7
Author(s): Dorit Kliemann, Ralph Adolphs, Lynn K. Paul, J. Michael Tyszka, Daniel Tranel
Software Mentions: 1
Published: almost 3 years ago
10.3389/fninf.2021.691918
Supervised Learning With Perceptual Similarity for Multimodal Gene Expression Registration of a Mouse Brain Atlas
Cited by: 6
Author(s): Jan Krepl, Francesco Casalegno, Émilie Delattre, Csaba Erö, Huanxiang Lu, Daniel Keller, Dimitri Rodarie, Henry Markram, Felix Schürmann
Software Mentions: 1
Published: almost 3 years ago
10.3389/fninf.2013.00027
Multi-atlas segmentation with joint label fusion and corrective learning—an open source implementation
Cited by: 155
Author(s): Hongzhi Wang, Paul A. Yushkevich
Software Mentions: 1
Published: over 11 years ago
10.1177/0269881116668592
The ICCAM platform study: An experimental medicine platform for evaluating new drugs for relapse prevention in addiction. Part B: fMRI description
Cited by: 15
Author(s): John McGonigle, Anna Murphy, Louise M. Paterson, Laurence Reed, Liam Nestor, Jonathan Nash, Richard M. Elliott, Karen D. Ersche, Remy Flechais, Rexford D. Newbould, Csaba Orban, Dana Smith, Eleanor Taylor, Adam D. Waldman, Trevor W. Robbins, Bill Deakin, David Nutt, Anne Lingford-Hughes, John Suckling, Iccam Platform
Software Mentions: 1
Published: over 7 years ago
10.3389/fninf.2013.00015
Fully automated rodent brain MR image processing pipeline on a Midas server: from acquired images to region-based statistics
Cited by: 25
Author(s): François Budin, Marion Hoogstoel, Patrick Reynolds, Michael Grauer, Shonagh K. O’Leary‐Moore, Ipek Oguz
Software Mentions: 1
Published: over 11 years ago
10.1038/s41598-020-74217-3
A neuroimaging marker for predicting longitudinal changes in pain intensity of subacute back pain based on large-scale brain network interactions
Cited by: 4
Author(s): Bo‐yong Park, Jae‐Joong Lee, Hong Ji Kim, Choong‐Wan Woo, Hyunjin Park
Software Mentions: 1
Published: over 3 years ago
10.1093/cercor/bhaa049
Mapping Short Association Fibers in the Early Cortical Visual Processing Stream Using In Vivo Diffusion Tractography
Cited by: 36
Author(s): Fakhereh Movahedian Attar, Evgeniya Kirilina, Daniel Haenelt, Kerrin Pine, Robert Trampel, Luke Edwards, Nikolaus Weiskopf
Software Mentions: 1
Published: about 4 years ago
10.3390/cells10071712
Changes in Cerebrospinal Fluid Balance of TNF and TNF Receptors in Naïve Multiple Sclerosis Patients: Early Involvement in Compartmentalised Intrathecal Inflammation
Cited by: 9
Author(s): Roberta Magliozzi, Francesco Pezzini, Mairi Pucci, Stefania Rossi, Francesco Facchiano, Damiano Marastoni, Martina Montagnana, Giuseppe Lippi, Richard Reynolds, Massimiliano Calabrese
Software Mentions: 1
Published: almost 3 years ago
10.3389/fninf.2019.00005
FuNP (Fusion of Neuroimaging Preprocessing) Pipelines: A Fully Automated Preprocessing Software for Functional Magnetic Resonance Imaging
Cited by: 52
Author(s): Bo‐yong Park, Kyoungseob Byeon, Hyunjin Park
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-70297-3
HARDI-ZOOMit protocol improves specificity to microstructural changes in presymptomatic myelopathy
Cited by: 12
Author(s): René Labounek, Jan Valošek, Tomáš Horák, Alena Svátková, Petr Bednařík, Lubomír Vojtíšek, Magda Horáková, Igor Nestrašil, Christophe Lenglet, Julien Cohen‐Adad, Josef Bednařík, Petr Hluštı́k
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-020-75015-7
Innate connectivity patterns drive the development of the visual word form area
Cited by: 35
Author(s): Jin Li, David E. Osher, Heather A. Hansen, Zeynep M. Saygin
Software Mentions: 1
Published: over 3 years ago
10.3390/cancers12040994
Image Analysis Reveals Microstructural and Volumetric Differences in Glioblastoma Patients with and without Preoperative Seizures
Cited by: 4
Author(s): Stefanie Bette, Melanie Barz, Huong Ly Nham, Thomas S. Huber, Maria Berndt, Arthur H. A. Sales, Friederike Schmidt‐Graf, Hanno S. Meyer, Yu‐Mi Ryang, Bernhard Meyer, Claus Zimmer, Jan S. Kirschke, Benedikt Wiestler
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0223297
Disruption of white matter connectivity in chronic obstructive pulmonary disease
Cited by: 1
Author(s): Catherine A. Spilling, Paul Jones, James Dodd, Thomas R. Barrick
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0226715
Comparison of quality control methods for automated diffusion tensor imaging analysis pipelines
Cited by: 21
Author(s): Seyyed Mohammad Hassan Haddad, Christopher J. Scott, Miracle Ozzoude, Melissa F. Holmes, Stephen R. Arnott, Nuwan D. Nanayakkara, Joel Ramirez, Sandra E. Black, Dar Dowlatshahi, Stephen C. Strother, Richard H. Swartz, Sean Symons, Manuel Montero‐Odasso, Ondri Investigators, Robert Bartha
Software Mentions: 1
Published: over 4 years ago
10.1186/1756-0500-5-610
“Nonparametric Local Smoothing” is not image registration
Cited by: 1
Author(s): Torsten Rohlfing, Brian B. Avants
Software Mentions: 1
Published: over 11 years ago
10.3389/fneur.2021.669172
Musical Hallucinations in Chronic Pain: The Anterior Cingulate Cortex Regulates Internally Generated Percepts
Cited by: 3
Author(s): Ashlyn Schmitgen, Jeremy Saal, Narayan Sankaran, Maansi Desai, Isabella Joseph, Philip A. Starr, Edward F. Chang, Prasad Shirvalkar
Software Mentions: 1
Published: about 3 years ago
10.3389/fneur.2021.615024
Study of Symptomatic vs. Silent Brain Infarctions on MRI in Elderly Subjects
Cited by: 3
Author(s): Sheelakumari Raghavan, Jonathan Graff‐Radford, Eugene Scharf, Scott A. Przybelski, Timothy G. Lesnick, Brian E. Gregg, Christopher G. Schwarz, Jeffrey L. Gunter, Samantha M. Zuk, Alejandro A. Rabinstein, Michelle M. Mielke, Ronald C. Petersen, David S. Knopman, Kejal Kantarci, Clifford R. Jack, Prashanthi Vemuri
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0213952
Diffusion tensor tractography of brainstem fibers and its application in pain
Cited by: 25
Author(s): Yu Zhang, Andrei A. Vakhtin, Jennifer Jennings, Payam Massaband, Max Wintermark, Patricia L. Craig, J. Wesson Ashford, J. David Clark, Ansgar J. Furst
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0138217
Relation of Childhood Home Environment to Cortical Thickness in Late Adolescence: Specificity of Experience and Timing
Cited by: 30
Author(s): Brian B. Avants, Daniel A. Hackman, Laura M. Betancourt, Gwendolyn M. Lawson, Hallam Hurt, Martha J. Farah
Software Mentions: 1
Published: over 8 years ago
10.3389/fneur.2018.00824
Differential Gray Matter Vulnerability in the 1 Year Following a Clinically Isolated Syndrome
Cited by: 13
Author(s): Ismail Koubiyr, Mathilde Deloire, Pierrick Coupé, Cécile Dulau, Pierre Besson, Amandine Moroso, Vincent Planche, Thomas Tourdias, Bruno Brochet, Aurélie Ruet
Software Mentions: 1
Published: over 5 years ago
10.7554/eLife.57017
M2 cortex-dorsolateral striatum stimulation reverses motor symptoms and synaptic deficits in Huntington’s disease
Cited by: 21
Author(s): Sara Fernández-García, Sara Conde-Berriozábal, Esther García-García, Clara Gort‐Paniello, David Bernal-Casas, Gerardo García-Díaz Barriga, Xavier López-Gil, Emma Muñoz‐Moreno, Guadalupe Sòria, Leticia Campa, Francesc Artigas, Manuel J. Rodrı́guez, Jordi Alberch, Mercè Masana
Software Mentions: 1
Published: over 3 years ago
10.3389/fneur.2020.556028
Altered Intrinsic Brain Activity and Functional Connectivity Before and After Knee Arthroplasty in the Elderly: A Resting-State fMRI Study
Cited by: 10
Author(s): Fei Lan, Guanwen Lin, Guanglei Cao, Zheng Liu, Ding Ma, Fangyan Liu, Mei Duan, Huiqun Fu, Wei Xiao, Zhigang Qi, Tianlong Wang
Software Mentions: 1
Published: over 3 years ago
10.3389/fneur.2020.602586
Resting-State Static and Dynamic Functional Abnormalities in Active Professional Fighters With Repetitive Head Trauma and With Neuropsychological Impairments
Cited by: 3
Author(s): Xiaowei Zhuang, Virendra Mishra, Rajesh Nandy, Zhiguo Yang, Karthik Sreenivasan, Lauren Bennett, Charles Bernick, Dietmar Cordes
Software Mentions: 1
Published: over 3 years ago
10.1186/s12880-020-00489-w
Serial MRI studies over 12 months using manual and atlas-based region of interest in patients with amyotrophic lateral sclerosis
Cited by: 2
Author(s): Ashwag R. Alruwaili, Kerstin Pannek, Robert D. Henderson, Marcus A. Gray, Nyoman D. Kurniawan, Pamela A. McCombe
Software Mentions: 1
Published: almost 4 years ago
10.3389/fneur.2021.667531
Insights on the Relationship Between Hippocampal Connectivity and Memory Performances at the Early Stage of Multiple Sclerosis
Cited by: 4
Author(s): Juliette Boscheron, Aurélie Ruet, Mathilde Deloire, Julie Charré-Morin, Aurore Saubusse, Bruno Brochet, Thomas Tourdias, Ismail Koubiyr
Software Mentions: 1
Published: about 3 years ago
10.3389/fneur.2018.00747
Functional and Structural Brain Damage in Friedreich's Ataxia
Cited by: 23
Author(s): Marinela Vavla, Filippo Arrigoni, Andrea Nordio, Alberto De Luca, Silvia Pizzighello, Elisa Petacchi, Gabriella Paparella, Maria Grazia D'Angelo, Erika Brighina, Emanuela Russo, Marianna Fantin, Paola Colombo, Andrea Martinuzzi
Software Mentions: 1
Published: over 5 years ago
10.3389/fneur.2016.00174
T2-Imaging Changes in the Nigrosome-1 Relate to Clinical Measures of Parkinson’s Disease
Cited by: 4
Author(s): Katherine A. Fu, Romil Nathan, Ivo D. Dinov, Junning Li, Arthur W. Toga
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0097176
A Correspondence between Individual Differences in the Brain's Intrinsic Functional Architecture and the Content and Form of Self-Generated Thoughts
Cited by: 141
Author(s): Krzysztof J. Gorgolewski, Daniel J Lurie, Sebastian Urchs, Judy Kipping, R. Cameron Craddock, Michael P. Milham, Daniel S. Margulies, Jonathan Smallwood
Software Mentions: 1
Published: about 10 years ago
10.3389/fneur.2019.00541
Stroke Lesion Segmentation in FLAIR MRI Datasets Using Customized Markov Random Fields
Cited by: 27
Author(s): Nagesh K. Subbanna, Deepthi Rajashekar, Bastian Cheng, Götz Thomalla, Jens Fiehler, Tal Arbel, Nils D. Forkert
Software Mentions: 1
Published: about 5 years ago
10.3389/fneur.2020.00854
The Impact of Covariates in Voxel-Wise Lesion-Symptom Mapping
Cited by: 5
Author(s): Deepthi Rajashekar, Matthias Wilms, Kent Hecker, Michael D. Hill, Sean P. Dukelow, Jens Fiehler, Nils D. Forkert
Software Mentions: 1
Published: almost 4 years ago
10.3389/fneur.2018.00279
Impulsivity in Parkinson’s Disease Is Associated With Alterations in Affective and Sensorimotor Striatal Networks
Cited by: 24
Author(s): M.F.L. Ruitenberg, Tina Wu, Bruno B. Averbeck, Kelvin L. Chou, Vincent Koppelmans, Rachael D. Seidler
Software Mentions: 1
Published: about 6 years ago
10.3389/fneur.2019.00208
Spatial Signature of White Matter Hyperintensities in Stroke Patients
Cited by: 29
Author(s): Markus D. Schirmer, Anne‐Katrin Giese, Panagiotis Fotiadis, Mark R. Etherton, Lisa Cloonan, Anand Viswanathan, Steven M. Greenberg, Ona Wu, Natalia S. Rost
Software Mentions: 1
Published: about 5 years ago
10.3389/fneur.2021.663899
Prediction of Clinical Outcomes in Acute Ischaemic Stroke Patients: A Comparative Study
Cited by: 5
Author(s): Deepthi Rajashekar, Michael D Hill, Andrew M. Demchuk, Mayank Goyal, Jens Fiehler, Nils D. Forkert
Software Mentions: 1
Published: about 3 years ago
10.3389/fneur.2018.00766
Structural, Microstructural, and Metabolic Alterations in Primary Progressive Aphasia Variants
Cited by: 27
Author(s): Alexandre Routier, Marie‐Odile Habert, Anne Bertrand, Aurélie Kas, Martina Sundqvist, Justine Mertz, Patrizia David, Hugo Bertin, Serge Belliard, Florence Pasquier, Karim Bennys, Olivier Martinaud, Frédérique Etcharry-Bouyx, Olivier Moreaud, Olivier Godefroy, Jérémie Pariente, Michèle Puel, Philippe Couratier, Claire Boutoleau-Brétonnière, Bernard Laurent, Raffaella Migliaccio, Bruno Dubois, Olivier Colliot, Marc Teichmann
Software Mentions: 1
Published: over 5 years ago