cran: ANTs | Projects | Ecosyste.ms: Papers

10.3390/cancers13184674

Glioblastoma Surgery Imaging–Reporting and Data System: Validation and Performance of the Automated Segmentation Task
Cited by: 6
Author(s): David Bouget, Roelant S Eijgelaar, André Pedersen, Ivar Kommers, Hilko Ardon, Frederik Barkhof, Lorenzo Bello, Mitchel S. Berger, Marco Conti Nibali, Julia Furtner, Even Hovig Fyllingen, Shawn L. Hervey-Jumper, Albert J. S. Idema, Barbara Kiesel, Alfred Kloet, Emmanuel Mandonnet, Domenique M J Müller, Pierre A. Robe, Marco Rossi, Lisa Millgård Sagberg, Tommaso Sciortino, W. A. van den Brink, Michiel Wagemakers, Georg Widhalm, Marnix G. Witte, Aeilko H. Zwinderman, Ingerid Reinertsen, Philip C. De Witt Hamer, Ole Solheim
Software Mentions: 2
Published: about 3 years ago

10.1093/cercor/bhz132

Enhanced Bottom-Up and Reduced Top-Down fMRI Activity Is Related to Long-Lasting Nonreinforced Behavioral Change
Cited by: 16
Author(s): Rotem Botvinik‐Nezer, Tom Salomon, Tom Schönberg
Software Mentions: 2
Published: over 5 years ago

10.1093/cercor/bhaa104

Corticostriatal White Matter Integrity and Dopamine D1 Receptor Availability Predict Age Differences in Prefrontal Value Signaling during Reward Learning
Cited by: 4
Author(s): Lieke de Boer, Benjamín Garzón, Jan Axelsson, Katrine Riklund, Lars Nyberg, Lars Bäckman, Marc Guitart-Masip
Software Mentions: 2
Published: over 4 years ago

10.1038/s42003-019-0611-3

An improved neuroanatomical model of the default-mode network reconciles previous neuroimaging and neuropathological findings
Cited by: 197
Author(s): Pedro Nascimento Alves, Chris Foulon, Vyacheslav Karolis, Danilo Bzdok, Daniel S. Margulies, Emmanuelle Volle
Software Mentions: 2
Published: about 5 years ago

10.1186/s13550-021-00817-3

Visualizing cellularity and angiogenesis in newly-diagnosed glioblastoma with diffusion and perfusion MRI and FET-PET imaging
Cited by: 5
Author(s): Friederike Liesche‐Starnecker, Georg Prokop, Igor Yakushev, Christine Preibisch, Claire Delbridge, Hanno S. Meyer, Amir Kaywan Aftahy, Melanie Barz, Bernhard Meyer, Claus Zimmer, Jürgen Schlegel, Benedikt Wiestler, Jens Gempt
Software Mentions: 2
Published: over 3 years ago

10.15252/emmm.201910378

Disruption of Sema3A/Plexin‐A1 inhibitory signalling in oligodendrocytes as a therapeutic strategy to promote remyelination
Cited by: 23
Author(s): Fabien Binamé, Lucas D Pham-Van, Caroline Spenlé, Valérie Jolivel, Dafni Birmpili, Lionel Meyer, Laurent Jacob, Laurence Meyer, Ayikoe Guy Mensah‐Nyagan, Chrystelle Po, Michael van der Heyden, G. Roussel, Dominique Bagnard
Software Mentions: 2
Published: about 5 years ago

10.1186/s12987-021-00264-1

Increased extracellular fluid is associated with white matter fiber degeneration in CADASIL: in vivo evidence from diffusion magnetic resonance imaging
Cited by: 12
Author(s): Xinfeng Yu, Xinzhen Yin, Hui Hong, Shuyue Wang, Yeerfan Jiaerken, Fan Zhang, Ofer Pasternak, Ruiting Zhang, Linglin Yang, Min Lou, Minming Zhang, Peiyu Huang
Software Mentions: 2
Published: over 3 years ago

10.3389/fnagi.2020.572086

Longitudinal Macro/Microstructural Alterations of Different Callosal Subsections in Parkinson’s Disease Using Connectivity-Based Parcellation
Cited by: 5
Author(s): Jingjing Wu, Tao Guo, Cheng Zhou, Xiaojun Guan, Ting Gao, Min Xuan, Quanquan Gu, Peiyu Huang, Zhe Song, Jiali Pu, Yaping Yan, Jun Tian, Baorong Zhang, Xiaojun Xu, Minming Zhang
Software Mentions: 2
Published: about 4 years ago

10.3389/fnagi.2019.00298

Lagged Coupled Changes Between White Matter Microstructure and Processing Speed in Healthy Aging: A Longitudinal Investigation
Cited by: 12
Author(s): Jessica Oschwald, Susan Mérillat, Franziskus Liem, Christina Röcke, Mike Martin, Lutz Jäncke
Software Mentions: 2
Published: about 5 years ago

10.3389/fnagi.2020.00094

Microstructural Alterations in Hippocampal Subfields Mediate Age-Related Memory Decline in Humans
Cited by: 28
Author(s): Hamsanandini Radhakrishnan, Shauna M. Stark
Software Mentions: 2
Published: over 4 years ago

10.3389/fnagi.2021.687001

The Contribution of White Matter Diffusion and Cortical Perfusion Pathology to Vascular Cognitive Impairment: A Multimode Imaging-Based Machine Learning Study
Cited by: 3
Author(s): Yao Wang, Peiwen Lu, Yafeng Zhan, Xiaowei Wu, Yage Qiu, Zheng Wang, Qun Xu, Yan Zhou
Software Mentions: 2
Published: over 3 years ago

10.3389/fbioe.2021.664268

Calibration of a Heterogeneous Brain Model Using a Subject-Specific Inverse Finite Element Approach
Cited by: 14
Author(s): J. Sebastian Giudice, Ahmed Alshareef, Taotao Wu, Andrew K. Knutsen, Lucy V Hiscox, Curtis L. Johnson, Matthew B. Panzer
Software Mentions: 2
Published: over 3 years ago

10.3389/fnhum.2020.563415

Prefrontal Cortex and Amygdala Subregion Morphology Are Associated With Obesity and Dietary Self-control in Children and Adolescents
Cited by: 12
Author(s): Mimi Kim, Shan Luo, Anisa Azad, Claire Campbell, Kimberly Felix, Ryan P. Cabeen, Britni R. Belcher, Robert Kim, Mónica Serrano-González, Megan M. Herting
Software Mentions: 2
Published: almost 4 years ago

10.3389/fnhum.2019.00430

Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks
Cited by: 12
Author(s): Mohsen Bahrami, Robert G. Lyday, Ramon Casanova, Jonathan H. Burdette, Sean L. Simpson, Paul J. Laurienti
Software Mentions: 2
Published: almost 5 years ago

10.3389/fnhum.2014.00195

Dynamic network participation of functional connectivity hubs assessed by resting-state fMRI
Cited by: 62
Author(s): Alexander Schaefer, Daniel S. Margulies, Gabriele Lohmann, Krzysztof J. Gorgolewski, Jonathan Smallwood, Stefan J. Kiebel, Arno Villringer
Software Mentions: 2
Published: over 10 years ago

10.3389/fnhum.2021.621263

Fractional Anisotropy in Selected, Motor-Related White Matter Tracts and Its Cross-Sectional and Longitudinal Associations With Motor Function in Healthy Older Adults
Cited by: 5
Author(s): Jessica Oschwald, Susan Mérillat, Lutz Jäncke, Rachael D. Seidler
Software Mentions: 2
Published: over 3 years ago

10.3389/fnhum.2017.00552

Dynamics of Intersubject Brain Networks during Anxious Anticipation
Cited by: 19
Author(s): Mahshid Najafi, Joshua Kinnison, Luiz Pessoa
Software Mentions: 2
Published: about 7 years ago

10.3389/fnana.2021.732464

Multi-Scale Light-Sheet Fluorescence Microscopy for Fast Whole Brain Imaging
Cited by: 13
Author(s): Zhouzhou Zhang, Xiao Yao, Xinxin Yin, Zhangcan Ding, Tianyi Huang, Yan Huo, Runan Ji, Hanchuan Peng, Zengcai V. Guo
Software Mentions: 2
Published: about 3 years ago

10.3389/fnana.2019.00089

Equine Stereotaxtic Population Average Brain Atlas With Neuroanatomic Correlation
Cited by: 6
Author(s): Philippa J. Johnson, Valentin Janvier, Wen‐Ming Luh, Marnie FitzMaurice, Teresa Southard, Elizabeth Barry
Software Mentions: 2
Published: about 5 years ago

10.3389/fnana.2020.599701

In vivo Population Averaged Stereotaxic T2w MRI Brain Template for the Adult Yucatan Micropig
Cited by: 7
Author(s): Stephano J. Chang, Andrea J. Santamaría, Francisco J. Sánchez, Luz M. Villamil, Pedro Pinheiro Saraiva, José Manuel Pestano Rodríguez, Yohjans Nunez-Gomez, Ioan Opriş, Juan P. Solano, James D. Guest, Brian R. Noga
Software Mentions: 2
Published: about 4 years ago

10.3389/fnana.2018.00075

Derivation of Fiber Orientations From Oblique Views Through Human Brain Sections in 3D-Polarized Light Imaging
Cited by: 20
Author(s): Daniel Schmitz, Sascha E.A. Muenzing, Martin Schöber, Nicole Schubert, Martina Minnerop, Thomas Lippert, Katrin Amunts, Markus Axer
Software Mentions: 2
Published: about 6 years ago

10.3389/fninf.2018.00040

IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies
Cited by: 34
Author(s): Pierre Deman, Manik Bhattacharjee, François Tadel, Anne‐Sophie Job, Denis Rivière, C. Yann, Philippe Kahane, Olivier David
Software Mentions: 2
Published: over 6 years ago

10.3389/fninf.2017.00017

Evaluation of Field Map and Nonlinear Registration Methods for Correction of Susceptibility Artifacts in Diffusion MRI
Cited by: 114
Author(s): Sijia Wang, Daniel J. Peterson, J. Christopher Gatenby, Wenbin Li, Thomas J. Grabowski, Tara M. Madhyastha
Software Mentions: 2
Published: over 7 years ago

10.3389/fninf.2018.00063

Pipeline for Analyzing Lesions After Stroke (PALS)
Cited by: 17
Author(s): Kaori Ito, Amit Kumar, Artemis Zavaliangos‐Petropulu, Steven C. Cramer, Sook‐Lei Liew
Software Mentions: 2
Published: about 6 years ago

10.3389/fninf.2016.00029

An Open-Source Label Atlas Correction Tool and Preliminary Results on Huntingtons Disease Whole-Brain MRI Atlases
Cited by: 7
Author(s): Jessica LeeAnn Forbes, Regina E. Y. Kim, Jane S. Paulsen, Hans J. Johnson
Software Mentions: 2
Published: over 8 years ago

10.3389/fninf.2020.00014

MonkeyCBP: A Toolbox for Connectivity-Based Parcellation of Monkey Brain
Cited by: 4
Author(s): Bin He, Zhengyi Yang, Lingzhong Fan, Bin Gao, Hai Li, Chuyang Ye, Bo You, Tianzi Jiang
Software Mentions: 2
Published: over 4 years ago

10.3389/fninf.2019.00034

Deep Learning Deformation Initialization for Rapid Groupwise Registration of Inhomogeneous Image Populations
Cited by: 6
Author(s): Sahar Ahmad, Jingfan Fan, Pei Dong, Xiaohuan Cao, Pew Thian Yap, Dinggang Shen
Software Mentions: 2
Published: over 5 years ago

10.3389/fneur.2021.612177

Altered Functional Connectivity and Cognition Persists 4 Years After a Transient Ischemic Attack or Minor Stroke
Cited by: 6
Author(s): Korinne Nicolas, Peter Goodin, Milanka M. Visser, Patricia T. Michie, Andrew Bivard, Christopher Levi, Mark Parsons, Frini Karayanidis
Software Mentions: 2
Published: over 3 years ago

10.3389/fneur.2020.00381

The Effect of Scan Length on the Assessment of BOLD Delay in Ischemic Stroke
Cited by: 7
Author(s): Ayse Ceren Tanrıtanır, Kersten Villringer, Ivana Galinović, Ulrike Grittner, Evgeniya Kirilina, Jochen B. Fiebach, Arno Villringer, Ahmed A. Khalil
Software Mentions: 2
Published: over 4 years ago

10.3389/fneur.2020.00153

Combined Diffusion Tensor Imaging and Quantitative Susceptibility Mapping Discern Discrete Facets of White Matter Pathology Post-injury in the Rodent Brain
Cited by: 14
Author(s): Neha Soni, Viktor Vegh, Xuan Vinh To, Abdalla Z. Mohamed, Karin Borges, Fatima A. Nasrallah
Software Mentions: 2
Published: over 4 years ago

10.3389/fneur.2017.00519

Recommendations for the Use of Automated Gray Matter Segmentation Tools: Evidence from Huntington’s Disease
Cited by: 31
Author(s): Eileanoir B. Johnson, Sarah Gregory, Hans J. Johnson, Alexandra Dürr, Blair R. Leavitt, Raymund A.C. Roos, Geraint Rees, Sarah J. Tabrizi, Rachael I. Scahill
Software Mentions: 2
Published: about 7 years ago

10.3389/fnins.2021.634063

Advanced Analysis of Diffusion Tensor Imaging Along With Machine Learning Provides New Sensitive Measures of Tissue Pathology and Intra-Lesion Activity in Multiple Sclerosis
Cited by: 7
Author(s): Olayinka Oladosu, Weiqiao Liu, Bruce Pike, Marcus Koch, Luanne M. Metz, Yunyan Zhang
Software Mentions: 2
Published: over 3 years ago

10.3389/fnins.2018.00064

Inter-subject Registration of Functional Images: Do We Need Anatomical Images?
Cited by: 32
Author(s): Elvis Dohmatob, Gaël Varoquaux, Bertrand Thirion
Software Mentions: 2
Published: almost 7 years ago

10.3389/fnins.2020.00845

Neuroprotective Effects of Casein-Derived Peptide Met-Lys-Pro (MKP) in a Hypertensive Model
Cited by: 5
Author(s): Asuka Tada, Hamizah Shahirah Hamezah, Daijiro Yanagisawa, Shigehiro Morikawa, Ikuo Tooyama
Software Mentions: 2
Published: over 4 years ago

10.3389/fnins.2021.663403

Energy-Period Profiles of Brain Networks in Group fMRI Resting-State Data: A Comparison of Empirical Mode Decomposition With the Short-Time Fourier Transform and the Discrete Wavelet Transform
Cited by: 9
Author(s): Dietmar Cordes, Muhammad Kaleem, Zhiguo Yang, Xiaowei Zhuang, Tim Curran, Karthik Sreenivasan, Virendra Mishra, Rajesh Nandy, Ryan R. Walsh
Software Mentions: 2
Published: over 3 years ago

10.3389/fnins.2018.00528

On the Extraction and Analysis of Graphs From Resting-State fMRI to Support a Correct and Robust Diagnostic Tool for Alzheimer's Disease
Cited by: 4
Author(s): Claudia Bachmann, Heidi I.L. Jacobs, PierGianLuca Porta Mana, Kim Dillen, Nils Richter, Boris von Reutern, Julian Dronse, Oezguer A. Onur, Karl‐Josef Langen, Gereon R. Fink, Juraj Kukolja, Abigail Morrison
Software Mentions: 2
Published: about 6 years ago

10.3389/fnins.2013.00162

Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences
Cited by: 32
Author(s): Nicholas J. Tustison, Hans J. Johnson, Torsten Rohlfing, Arno Klein, Samik Ghosh, Luis Ibáñez, Brian B. Avants
Software Mentions: 2
Published: almost 12 years ago

10.3389/fnins.2019.00169

Robust Motion Regression of Resting-State Data Using a Convolutional Neural Network Model
Cited by: 13
Author(s): Zhiguo Yang, Xiaowei Zhuang, Karthik Sreenivasan, Virendra Mishra, Dietmar Cordes, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 2
Published: over 5 years ago

10.3389/fnins.2015.00061

Segmentation of brain magnetic resonance images based on multi-atlas likelihood fusion: testing using data with a broad range of anatomical and photometric profiles
Cited by: 47
Author(s): Xiaoying Tang, Deana Crocetti, Kwame S. Kutten, Can Ceritoglu, Marilyn Albert, Susumu Mori, Stewart H. Mostofsky, Michael I. Miller
Software Mentions: 2
Published: over 9 years ago

10.3389/fpsyt.2020.00209

Default Mode Network Efficiency Is Correlated With Deficits in Inhibition in Adolescents With Inhalant Use Disorder
Cited by: 4
Author(s): Dailett M. Hernández-Álvarez, Lucero Pacheco, Roberto Velasco-Segura, Miguel Pérez de la Mora, Claudia Tejeda-Romero, Nadia González-García
Software Mentions: 2
Published: over 4 years ago

10.3389/fpsyg.2020.579188

Using Signal Detection Theory to Better Understand Cognitive Fatigue
Cited by: 8
Author(s): Glenn R. Wylie, Bing Yao, Joshua Sandry, John DeLuca
Software Mentions: 2
Published: almost 4 years ago

10.3389/fnsys.2015.00030

Hippocampal subfield and medial temporal cortical persistent activity during working memory reflects ongoing encoding
Cited by: 19
Author(s): Rachel K. Nauer, Andrew S. Whiteman, Matthew F Dunne, Chantal E. Stern, Karin Schön
Software Mentions: 2
Published: over 9 years ago

10.1093/gigascience/giw011

The Healthy Brain Network Serial Scanning Initiative: a resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions
Cited by: 64
Author(s): David O’Connor, Natan Vega Potler, Meagan Kovacs, Ting Xu, Lei Ai, John Pellman, Tamara Vanderwal, Lucas C. Parra, Saul B. Cohen, Samik Ghosh, Jasmine Escalera, Natalie Grant-Villegas, Yael Osman, Anastasia Bui, R. Cameron Craddock, Michael P. Milham
Software Mentions: 2
Published: almost 8 years ago

10.1002/hbm.25542

Exploring the relationship between anthropomorphism and <scp>theory‐of‐mind</scp> in brain and behaviour
Cited by: 6
Author(s): Ruud Hortensius, M. Kent, Kohinoor Monish Darda, Laura Jastrzab, Kami Koldewyn, Richard Ramsey, Emily S. Cross
Software Mentions: 2
Published: over 3 years ago

10.1002/hbm.23397

Motion‐related artifacts in structural brain images revealed with independent estimates of in‐scanner head motion
Cited by: 139
Author(s): Neil K. Savalia, Phillip F. Agres, Micaela Y. Chan, Eric Feczko, James L. Kennedy, Gagan S. Wig
Software Mentions: 2
Published: about 8 years ago

10.1002/hbm.24948

White matter extension of the Melbourne Children's Regional Infant Brain atlas: M‐CRIB‐WM
Cited by: 9
Author(s): Bonnie Alexander, Joseph Yuan-Mou Yang, Sarah Hui Wen Yao, Michelle Hao Wu, Jian Chen, Claire E. Kelly, Gareth Ball, Lillian G. Matthews, Marc L. Seal, Peter J. Anderson, Lex W. Doyle, Jeanie L.Y. Cheong, Alicia J Spittle, Deanne K. Thompson
Software Mentions: 2
Published: over 4 years ago

10.1002/hbm.25157

Improved Vim targeting for focused ultrasound ablation treatment of essential tremor: A probabilistic and patient‐specific approach
Cited by: 13
Author(s): Jason H. Su, Eun Young Choi, Thomas Tourdias, Manojkumar Saranathan, Casey H. Halpern, Jaimie M. Henderson, Kim Butts Pauly, Pejman Ghanouni, Brian K. Rutt
Software Mentions: 2
Published: over 4 years ago

10.1002/hbm.25580

Longitudinal white matter changes associated with cognitive training
Cited by: 4
Author(s): Emily S. Nichols, Jonathan Erez, Bobby Stojanoski, Kathleen Lyons, Suzanne T. Witt, Charlotte Mace, Sameera Khalid, Adrian M. Owen
Software Mentions: 2
Published: over 3 years ago

10.3390/jcm10020345

A Multi-Modal MRI Analysis of Cortical Structure in Relation to Gender Dysphoria, Sexual Orientation, and Age in Adolescents
Cited by: 12
Author(s): Malvina N. Skorska, Sofia Chavez, Gabriel A. Devenyi, Raihaan Patel, Lindsey T. Thurston, Meng‐Chuan Lai, Kenneth J. Zucker, M. Mallar Chakravarty, Nancy J. Lobaugh, Doug P. VanderLaan
Software Mentions: 2
Published: almost 4 years ago

10.1002/cne.24640

The effect of Zika virus infection in the ferret
Cited by: 9
Author(s): Elizabeth Hutchinson, Mitali Chatterjee, Laura D. Reyes, Francis Tanam Djankpa, William G. Valiant, Bernard J. Dardzinski, Joseph J. Mattapallil, Carlo Pierpaoli, Sharon L. Juliano
Software Mentions: 2
Published: almost 6 years ago

10.1007/s10278-017-9984-3

Predicting Deletion of Chromosomal Arms 1p/19q in Low-Grade Gliomas from MR Images Using Machine Intelligence
Cited by: 151
Author(s): Zeynettin Akkus, Issa Ali, Jiří Sedlář, Jay P. Agrawal, Ian F. Parney, Caterina Giannini, Bradley J. Erickson
Software Mentions: 2
Published: over 7 years ago

10.1038/sdata.2015.3

The pediatric template of brain perfusion
Cited by: 51
Author(s): Brian B. Avants, Jeffrey T. Duda, Emily Kilroy, Kate Krasileva, Kay Jann, Benjamin M. Kandel, Nicholas J. Tustison, Lirong Yan, Mayank Jog, Robert X. Smith, Yi Wang, Mirella Dapretto, Danny J.J. Wang
Software Mentions: 2
Published: almost 10 years ago

10.1038/sdata.2018.9

The Brain/MINDS 3D digital marmoset brain atlas
Cited by: 67
Author(s): Alexander Woodward, Tsutomu Hashikawa, Masami Maeda, Takaaki Kaneko, Keigo Hikishima, Atsushi Iriki, Hideyuki Okano, Yoko Yamaguchi
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41597-019-0113-7

fMRI data of mixed gambles from the Neuroimaging Analysis Replication and Prediction Study
Cited by: 27
Author(s): Rotem Botvinik‐Nezer, Roni Iwanir, Felix Holzmeister, Jürgen Huber, Magnus Johannesson, Michael Kirchler, Anna Dreber, Colin F. Camerer, Russell A. Poldrack, Tom Schönberg
Software Mentions: 2
Published: over 5 years ago

10.1038/s41597-020-0570-z

A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices
Cited by: 3
Author(s): Frederik Filip Stæger, Kristian Nygaard Mortensen, Malthe Skytte Nordentoft Nielsen, Björn Sigurðsson, Louis Krog Kaufmann, Hajime Hirase
Software Mentions: 2
Published: over 4 years ago

10.1038/s41597-020-0557-9

CerebrA, registration and manual label correction of Mindboggle-101 atlas for MNI-ICBM152 template
Cited by: 38
Author(s): Ana Laura Manera, Mahsa Dadar, Vladimir Fonov, D. Louis Collins
Software Mentions: 2
Published: over 4 years ago

10.1038/s41597-021-00985-w

Multi-modal magnetic resonance imaging in a mouse model of concussion
Cited by: 6
Author(s): Xuan Vinh To, Fatima A. Nasrallah
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-017-14476-9

Potential for social involvement modulates activity within the mirror and the mentalizing systems
Cited by: 9
Author(s): Chiara Begliomini, Andrea Cavallo, Valéria Manera, Cristina Becchio, Roberto Stramare, Diego Miotto, Umberto Castiello
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-018-26995-0

Subcortical structural connectivity of insular subregions
Cited by: 110
Author(s): Jimmy Ghaziri, Alan Tucholka, Gabriel Girard, Olivier Boucher, Jean‐Christophe Houde, Maxime Descoteaux, Sami Obaid, Guillaume Gilbert, Isabelle Rouleau, Dang Khoa Nguyen
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-32689-4

Neural correlates of multi-day learning and savings in sensorimotor adaptation
Cited by: 23
Author(s): M.F.L. Ruitenberg, Vincent Koppelmans, Y. E. De Dios, N. E. Gadd, Scott J. Wood, P. A. Reuter-Lorenz, I. S. Kofman, Jacob J. Bloomberg, Ajitkumar P. Mulavara, Rachael D. Seidler
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-019-45036-y

Image Segmentation Based on Relative Motion and Relative Disparity Cues in Topographically Organized Areas of Human Visual Cortex
Cited by: 6
Author(s): Peter J. Kohler, Benoit R. Cottereau, Anthony M. Norcia
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-47505-w

Genetic Risk for Rheumatoid Arthritis is Associated with Increased Striatal Volume in Healthy Young Adults
Cited by: 1
Author(s): Reut Avinun, Adam Nevo, Ahmad R. Hariri
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-56858-1

Mesolimbic dopamine D2 receptors and neural representations of subjective value
Cited by: 15
Author(s): Jaime J. Castrellon, Jacob S Young, Linh C. Dang, Ronald L. Cowan, David H. Zald, Gregory R. Samanez-Larkin
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-58076-6

Neural correlates of retrieval-based enhancement of autobiographical memory in older adults
Cited by: 5
Author(s): Qianli Xu, Jiayi Zhang, Joanes Grandjean, Cheston Tan, Vigneshwaran Subbaraju, Liyuan Li, Kuan J. Lee, Po‐Jang Hsieh, Joo‐Hwee Lim
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-59042-y

A Robust Image Registration Interface for Large Volume Brain Atlas
Cited by: 34
Author(s): Ní Hóng, Chaozhen Tan, Zuren Feng, Shangbin Chen, Zoutao Zhang, Wenwei Li, Yue Guan, Hui Gong, Qingming Luo, Anan Li
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-61665-0

Stereotactic Cortical Atlas of the Domestic Canine Brain
Cited by: 21
Author(s): Philippa J. Johnson, Wen‐Ming Luh, Benjamin C. Rivard, Kathleen Graham, Andrew White, Marnie FitzMaurice, John P. Loftus, Elizabeth Barry
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-020-68299-2

The innate immune toll-like-receptor-2 modulates the depressogenic and anorexiolytic neuroinflammatory response in obstructive sleep apnoea
Cited by: 7
Author(s): Dora Polšek, Diana Cash, Mattia Veronese, Katarina Ilić, Tobias C. Wood, Milan Milošević, Svjetlana Kalanj-Bognar, Mary J. Morrell, Steve Williams, Srećko Gajović, Guy Leschziner, Dinko Mitrečić, Ivana Rosenzweig
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-020-74054-4

Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations
Cited by: 41
Author(s): Bramsh Qamar Chandio, Shannon L. Risacher, Franco Pestilli, Daniel Bullock, Fang‐Cheng Yeh, Serge Koudoro, Ariel Rokem, Jaroslaw Harezlak, Eleftherios Garyfallidis
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-020-76857-x

Natural bladder filling alters resting brain function at multiple spatial scales: a proof-of-concept MAPP Network Neuroimaging Study
Cited by: 8
Author(s): Ishtiaq Mawla, Andrew Schrepf, Eric Ichesco, Steven E. Harte, David J. Klumpp, James W. Griffith, Eric Strachan, Claire C. Yang, H. Henry Lai, Gerald L. Andriole, Vincent A. Magnotta, Karl J. Kreder, Daniel J. Clauw, Richard E. Harris, J. Quentin Clemens, J. Richard Landis, Chris Mullins, Larissa V. Rodríguez, Emeran A. Mayer, Jason J. Kutch
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-020-76935-0

Contextual experience modifies functional connectome indices of topological strength and efficiency
Cited by: 7
Author(s): Marjory Pompilus, Luis M. Colon-Perez, Matteo M Grudny, Marcelo Febo
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-020-78768-3

Using functional connectivity changes associated with cognitive fatigue to delineate a fatigue network
Cited by: 27
Author(s): Glenn R. Wylie, Bing Yao, Helen M. Genova, M. H. Chen, John DeLuca
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-021-82716-0

IE-Map: a novel in-vivo atlas and template of the human inner ear
Cited by: 5
Author(s): Seyed-Ahmad Ahmadi, Theresa Raiser, Ria Maxine Ruehl, Virginia L. Flanagin, Peter zu Eulenburg
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-021-85807-0

Flexible annotation atlas of the mouse brain: combining and dividing brain structures of the Allen Brain Atlas while maintaining anatomical hierarchy
Cited by: 5
Author(s): Norio Takata, Nobuhiko Sato, Yuji Komaki, Hideyuki Okano, Kenji F. Tanaka
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-021-91899-5

In vivo multi-parametric manganese-enhanced MRI for detecting amyloid plaques in rodent models of Alzheimer’s disease
Cited by: 8
Author(s): Eugene Kim, Davide Di Censo, Mattia Baraldo, Camilla Simmons, Ilaria De Rosa, Karen Randall, Clive Ballard, Ben Dickie, Steven Williams, Richard Killick, Diana Cash
Software Mentions: 2
Published: over 3 years ago

10.3390/s20185097

3D Deep Learning on Medical Images: A Review
Cited by: 214
Author(s): Satya P. Singh, Lipo Wang, Sukrit Gupta, Haveesh Goli, Parasuraman Padmanabhan, Balázs Gulyás
Software Mentions: 2
Published: about 4 years ago

10.1093/scan/nsaa165

Stereotypes bias face perception via orbitofrontal–fusiform cortical interaction
Cited by: 4
Author(s): Benjamin O. Barnett, Jeffrey A. Brooks, Jonathan B. Freeman
Software Mentions: 2
Published: almost 4 years ago

10.1093/scan/nsab035

Brain activation during the observation of real soccer game situations predicts creative goal scoring
Cited by: 5
Author(s): Christian Rominger, Karl Koschutnig, Daniel Memmert, Ilona Papousek, Corinna M. Perchtold‐Stefan, Mathias Benedek, Andreas Schwerdtfeger, Andréas Fink
Software Mentions: 2
Published: over 3 years ago

10.1038/s41398-019-0560-0

Repetitive negative thinking in daily life and functional connectivity among default mode, fronto-parietal, and salience networks
Cited by: 42
Author(s): David M. Lydon‐Staley, Christine Kuehner, Vera Zamoscik, Silke Huffziger, Peter Kirsch, Danielle S. Bassett
Software Mentions: 2
Published: about 5 years ago

10.1038/s41368-019-0072-z

Temporomandibular joint damage in K/BxN arthritic mice
Cited by: 8
Author(s): Sabine Kuchler‐Bopp, Alexandre Mariotte, Marion Strub, Chrystelle Po, Aurore De Cauwer, Georg Schulz, Xavier Van Bellinghen, Florence Fioretti, François Clauss, Philippe Georgel, Nadia Benkirane‐Jessel, Fabien Bornert
Software Mentions: 2
Published: almost 5 years ago

10.7554/eLife.49941

In vivo assessment of the neural substrate linked with vocal imitation accuracy
Cited by: 7
Author(s): Julie Hamaide, Kristina Lukacova, Jasmien Orije, Georgios A. Keliris, Marleen Verhoye, Annemie Van der Linden
Software Mentions: 2
Published: over 4 years ago

10.7554/eLife.64694

An expanding manifold in transmodal regions characterizes adolescent reconfiguration of structural connectome organization
Cited by: 36
Author(s): Bo‐yong Park, Richard A. I. Bethlehem, Casey Paquola, Sara Larivière, Raúl Rodríguez‐Cruces, Reinder Vos de Wael, Edward T. Bullmore, Raymond J. Dolan, Ian Goodyer, Peter Fonagy, Peter B. Jones, Michael Moutoussis, Tobias Hauser, Sharon Neufeld, Rafael Romero-García, Michelle St Clair, Petra E. Vértes, Kirstie Whitaker, Becky Inkster, Gita Prabhu, Cinly Ooi, Umar Toseeb, Barry Widmer, Junaid Bhatti, Laura Villis, Ayesha Alrumaithi, Sarah Birt, Aislinn Bowler, Kalia Cleridou, Hina Dadabhoy, Emma Davies, Ashlyn Firkins, Sian Granville, Elizabeth Harding, Alexandra Hopkins, Daniel Isaacs, Janchai King, Danae Kokorikou, Christina Maurice, Cleo McIntosh, Jessica Memarzia, Harriet L. Mills, Ciara O’Donnell, Sara Pantaleone, Jenny Scott, Beatrice Kiddle, Ela Polek, Pasco Fearon, John Suckling, Anne‐Laura van Harmelen, Rogier A. Kievit, Sam Chamberlain, Boris C. Bernhardt
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.60136

Chimpanzee brain morphometry utilizing standardized MRI preprocessing and macroanatomical annotations
Cited by: 22
Author(s): Sam Vickery, William D. Hopkins, Chet C. Sherwood, Steven J. Schapiro, Robert D. Latzman, Svenja Caspers, Christian Gaser, Simon B. Eickhoff, Robert Dahnke, Felix Hoffstaedter
Software Mentions: 2
Published: almost 4 years ago

10.7554/eLife.65590

A quadratic model captures the human V1 response to variations in chromatic direction and contrast
Cited by: 3
Author(s): Michael Barnett, Geoffrey K. Aguirre, David H. Brainard
Software Mentions: 2
Published: over 3 years ago

10.1523/JNEUROSCI.1279-19.2019

Higher CSF Tau Levels Are Related to Hippocampal Hyperactivity and Object Mnemonic Discrimination in Older Adults
Cited by: 59
Author(s): David Berron, Arturo Cárdenas-Blanco, Daniel Bittner, Coraline D. Metzger, Annika Spottke, Michael T. Heneka, Klaus Fließbach, Anja Schneider, Stefan J. Teipel, Michael Wagner, Oliver Speck, Frank Jessen, Emrah Düzel
Software Mentions: 2
Published: about 5 years ago

10.1523/JNEUROSCI.0189-20.2020

α-Synuclein Induces Progressive Changes in Brain Microstructure and Sensory-Evoked Brain Function That Precedes Locomotor Decline
Cited by: 10
Author(s): Winston T. Chu, Jesse C. DeSimone, Cara J. Riffe, Han Liu, Paramita Chakrabarty, Benoit I. Giasson, Vinata Vedam‐Mai, David E. Vaillancourt
Software Mentions: 2
Published: over 4 years ago

10.1523/JNEUROSCI.0528-20.2021

Increased Hippocampal Excitability and Altered Learning Dynamics Mediate Cognitive Mapping Deficits in Human Aging
Cited by: 18
Author(s): Nadine Diersch, José P. Valdés-Herrera, Claus Tempelmann, Thomas Wolbers
Software Mentions: 2
Published: over 3 years ago

10.1523/ENEURO.0197-18.2018

Longitudinal Changes in Semantic Concreteness in Semantic Variant Primary Progressive Aphasia (svPPA)
Cited by: 18
Author(s): Katheryn A.Q. Cousins, Sharon Ash, Christopher Olm, Murray Grossman
Software Mentions: 2
Published: about 6 years ago

10.1523/ENEURO.0250-19.2019

Cognitive Flexibility Improves Memory for Delayed Intentions
Cited by: 7
Author(s): Seth Koslov, Arjun Mukerji, Katlyn R. Hedgpeth, Jarrod A. Lewis-Peacock
Software Mentions: 2
Published: about 5 years ago

10.1523/ENEURO.0476-19.2020

<i>In Vivo</i>Diffusion Tensor Imaging in Acute and Subacute Phases of Mild Traumatic Brain Injury in Rats
Cited by: 13
Author(s): Isabel San Martín Molina, Raimo A. Salo, Ali Abdollahzadeh, Jussi Tohka, Olli Gröhn, Alejandra Sierra
Software Mentions: 2
Published: over 4 years ago

10.3389/fneur.2021.648548

Utility of Multi-Modal MRI for Differentiating of Parkinson's Disease and Progressive Supranuclear Palsy Using Machine Learning
Cited by: 20
Author(s): Aron Sahand Talai, Jan Sedlacik, Kai Boelmans, Nils D. Forkert
Software Mentions: 1
Published: over 3 years ago

10.3390/brainsci10070463

Domain Mapping and Deep Learning from Multiple MRI Clinical Datasets for Prediction of Molecular Subtypes in Low Grade Gliomas
Cited by: 23
Author(s): Muhaddisa Barat Ali, Irene Yu‐Hua Gu, Mitchel S. Berger, Johan Pallud, Derek G. Southwell, Georg Widhalm, Alexandre Roux, Tomás Gómez Vecchio, Asgeir Store Jakola
Software Mentions: 1
Published: over 4 years ago

10.1523/ENEURO.0060-18.2018

Human Motor Thalamus Reconstructed in 3D from Continuous Sagittal Sections with Identified Subcortical Afferent Territories
Cited by: 58
Author(s): Igor A. Ilinsky, Andreas Horn, Perrine Paul‐Gilloteaux, Pierre Gressèns, Catherine Verney, K. Kultas‐Ilinsky
Software Mentions: 1
Published: over 6 years ago

10.3389/fnins.2013.00041

A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation
Cited by: 8
Author(s): Julio Martín Duarte-Carvajalino, Guillermo Sapiro, Noam Harel, Christophe Lenglet
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-021-81362-w

Homologous laminar organization of the mouse and human subiculum
Cited by: 5
Author(s): Michael S. Bienkowski, Farshid Sepehrband, Nyoman D. Kurniawan, Jim Stanis, Laura Korobkova, Neda Khanjani, Kristi Clark, Houri Hintiryan, Carol A. Miller, Hong‐Wei Dong
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pone.0182340

Detailing neuroanatomical development in late childhood and early adolescence using NODDI
Cited by: 90
Author(s): Alyssa Mah, Bryce L. Geeraert, Catherine Lebel
Software Mentions: 1
Published: over 7 years ago

10.3389/fnins.2020.566643

Reproducibility of Glutamate, Glutathione, and GABA Measurements in vivo by Single-Voxel STEAM Magnetic Resonance Spectroscopy at 7-Tesla in Healthy Individuals
Cited by: 13
Author(s): Ofer Gonen, Bradford A. Moffat, Patrick Kwan, Terence J. O’Brien, Patricia Desmond, Elaine Lui
Software Mentions: 1
Published: about 4 years ago

10.1007/s40708-015-0020-4

Multimodal neuroimaging computing: the workflows, methods, and platforms
Cited by: 21
Author(s): Sidong Liu, Weidong Cai, Fan Zhang, Michael Fulham, Dagan Feng, Sonia Pujol, Ron Kikinis
Software Mentions: 1
Published: about 9 years ago

10.3389/fnins.2020.581474

Multi-Echo Quantitative Susceptibility Mapping for Strategically Acquired Gradient Echo (STAGE) Imaging
Cited by: 12
Author(s): Sara Gharabaghi, Saifeng Liu, Ying Wang, Yongsheng Chen, Sagar Buch, Mojtaba Jokar, Thomas Wischgoll, Nasser H. Kashou, Chunyan Zhang, Bo Wu, Jingliang Cheng, E. Mark Haacke
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0175690

Childhood socioeconomic status and childhood maltreatment: Distinct associations with brain structure
Cited by: 60
Author(s): Gwendolyn M. Lawson, Joshua S. Camins, Laura Wisse, Jue Wu, Jeffrey T. Duda, Philip A. Cook, James C. Gee, Martha J. Farah
Software Mentions: 1
Published: over 7 years ago

10.3389/fnins.2013.00151

Computational analysis of LDDMM for brain mapping
Cited by: 36
Author(s): Can Ceritoglu, Xiaoying Tang, Margaret Chow, Darian Hadjiabadi, Damish Shah, Timothy Brown, Muhammad H. Burhanullah, Huong Trinh, John Hsu, Katarina Ament, Deana Crocetti, Susumu Mori, Stewart H. Mostofsky, Steven Yantis, Michael I. Miller, J. Tilak Ratnanather
Software Mentions: 1
Published: almost 12 years ago

Projects: cran: ANTs

Papers Mentioning ANTs 393