Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: AMR
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/AMR
Antimicrobial Resistance Data Analysis
27 versions
Latest release: about 1 year ago
1,641 downloads last month
Papers Mentioning AMR 30
10.1186/s12866-019-1548-x
Comparative diversity of microbiomes and Resistomes in beef feedlots, downstream environments and urban sewage influentCited by: 24
Author(s): Rahat Zaheer, Steven M. Lakin, Rodrigo Ortega Polo, Shaun R. Cook, Francis J. Larney, Paul S. Morley, Calvin W. Booker, Sherry J. Hannon, Gary Van Domselaar, Ron Read, Tim A. McAllister
Software Mentions: 3
Published: over 5 years ago
10.1186/s13104-020-05065-7
Relocating a pediatric hospital: Does antimicrobial resistance change?Cited by: 0
Author(s): Annika Schönfeld, R. Ascherl, Stefanie Petzold-Quinque, Norman Lippmann, Arne C. Rodloff, Wieland Kieß
Software Mentions: 3
Published: over 4 years ago
10.3389/fvets.2020.00490
Perception of Drug Vendors and Pig and Poultry Farmers of Imerintsiatosika, in Madagascar, Toward Risks Related to Antibiotic Usage: A Q-Method ApproachCited by: 5
Author(s): Chloé Bâtie, Daouda Kassié, Diary Ny Ranto Mamorisoa Randravatsilavo, Laurence Baril, Agnès Waret Szkuta, Flavie Goutard
Software Mentions: 3
Published: over 4 years ago
10.1186/s13059-017-1380-2
FineMAV: prioritizing candidate genetic variants driving local adaptations in human populationsCited by: 19
Author(s): Michał Szpak, Massimo Mezzavilla, Qasim Ayub, Yuan Chen, Yali Xue, Chris Tyler‐Smith
Software Mentions: 3
Published: almost 7 years ago
10.3390/ani10081264
A Review of Antimicrobial Resistance in Poultry Farming within Low-Resource SettingsCited by: 88
Author(s): Hayden D. Hedman, Karla Vasco, Lixin Zhang
Software Mentions: 2
Published: over 4 years ago
10.1186/s12862-019-1457-5
Serotype-specific evolutionary patterns of antimicrobial-resistant Salmonella entericaCited by: 20
Author(s): Jingqiu Liao, Renato H. Orsi, Laura M. Carroll, Jasna Kovač, Hong‐Yu Ou, Hailong Zhang
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0200278
Positive selection on schizophrenia-associated ST8SIA2 gene in post-glacial AsiaCited by: 13
Author(s): Naoko T. Fujito, Yoko Satta, Masaya Hane, Atsushi Matsui, Kenta Yashima, Ken Kitajima, Chihiro Sato, Naoyuki Takahata, Toshiyuki Hayakawa
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0251801
Natural plant products as potential inhibitors of RNA dependent RNA polymerase of Severe Acute Respiratory Syndrome Coronavirus-2Cited by: 22
Author(s): Shruti Koulgi, Vinod Jani, Mallikarjunachari Uppuladinne V N, Uddhavesh Sonavane, Rajendra Joshi
Software Mentions: 2
Published: over 3 years ago
10.1080/22221751.2019.1648182
Combining sequencing approaches to fully resolve a carbapenemase-encoding megaplasmid in a <i>Pseudomonas shirazica</i> clinical strainCited by: 15
Author(s): João Botelho, Cédric Lood, Sally R. Partridge, Vera van Noort, Rob Lavigne, Filipa Grosso, Luı́sa Peixe
Software Mentions: 2
Published: almost 6 years ago
10.3390/ijerph16111925
Emerging Resistance of Neglected Tropical Diseases: A Scoping Review of the LiteratureCited by: 19
Author(s): Folahanmi T. Akinsolu, Priscilla O. Nemieboka, Diana Wangeshi Njuguna, Makafui N. Ahadji, Dóra Dezső, Orsolya Varga
Software Mentions: 2
Published: over 5 years ago
10.3390/jpm11030213
Genetic Variants Allegedly Linked to Antisocial Behaviour Are Equally Distributed Across Different PopulationsCited by: 2
Author(s): Stefania Zampatti, Michele Reni, Carlo Fabrizio, Andrea Termine, Giulia Campoli, Valerio Caputo, Claudia Strafella, Raffaella Cascella, Carlo Caltagirone, Emiliano Giardina
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0172310
Assessments of global drivers of vaccine hesitancy in 2014—Looking beyond safety concernsCited by: 126
Author(s): Melanie Marti, Monica Anna de Cola, Noni E. MacDonald, Laure Dumolard, Philippe Duclos
Software Mentions: 1
Published: almost 8 years ago
10.1093/cid/ciz477
Occurrence of Typhoid Fever Complications and Their Relation to Duration of Illness Preceding Hospitalization: A Systematic Literature Review and Meta-analysisCited by: 29
Author(s): Ligia María Cruz Espinoza, Ellen McCreedy, Marianne Holm, Justin Im, Ondari D. Mogeni, Prerana Parajulee, Ursula Panzner, Se Eun Park, Trevor Toy, Andrea Haselbeck, Hye Jin Seo, Hyon Jin Jeon, Jong‐Hoon Kim, Soo Young Kwon, Jerome H. Kim, Christopher M. Parry, Florian Marks
Software Mentions: 1
Published: about 5 years ago
10.1007/s13346-021-01009-1
Drug delivery for fighting infectious diseases: a global perspectiveCited by: 4
Author(s): Brigitta Loretz, Yu‐Kyoung Oh, Sarah P. Hudson, Zhen Gu, Claus‐Michael Lehr
Software Mentions: 1
Published: over 3 years ago
10.2196/25907
Next-Generation Digital Biomarkers for Tuberculosis and Antibiotic Stewardship: Perspective on Novel Molecular Digital Biomarkers in Sweat, Saliva, and Exhaled BreathCited by: 6
Author(s): Noé Brasier, Michael Osthoff, Fiorangelo De Ieso, Jens Eckstein
Software Mentions: 1
Published: over 3 years ago
10.1007/s00366-021-01485-6
Dynamic mode decomposition in adaptive mesh refinement and coarsening simulationsCited by: 8
Author(s): Gabriel F. Barros, Malú Grave, Alex Viguerie, Alessandro Reali, Álvaro L. G. A. Coutinho
Software Mentions: 1
Published: over 3 years ago
10.3389/fcimb.2020.00365
WGS-Based Prediction and Analysis of Antimicrobial Resistance in Campylobacter jejuni Isolates From IsraelCited by: 22
Author(s): Assaf Rokney, Lea Valinsky, Katleen Vranckx, Noa Feldman, Vered Agmon, Jacob Moran-Gilad, Miriam Weinberger
Software Mentions: 1
Published: over 4 years ago
10.3390/antibiotics10040445
Examining the Effect of Context, Beliefs, and Values on UK Farm Veterinarians’ Antimicrobial Prescribing: A Randomized Experimental Vignette and Cross-Sectional SurveyCited by: 7
Author(s): Sarah E. Golding, Jane Ogden, Helen M. Higgins
Software Mentions: 1
Published: over 3 years ago
10.3389/fvets.2021.620998
Assessment of Evaluation Tools for Integrated Surveillance of Antimicrobial Use and Resistance Based on Selected Case StudiesCited by: 16
Author(s): Marianne Sandberg, Ayla Hesp, Cécile Aenishaenslin, Marion Bordier, Houda Bennani, Ursula E. A. Bergwerff, Ilias Chantziaras, Daniele De Meneghi, Johanne Ellis‐Iversen, Maria Eleni Filippizi, Koen Mintiens, Liza Rosenbaum Nielsen, Madelaine Norström, Laura Tomassone, G. van Schaik, Lis Alban
Software Mentions: 1
Published: over 3 years ago
10.3390/antibiotics8040243
Knowledge of Antimicrobial Resistance among Veterinary Students and Their Personal Antibiotic Use Practices: A National Cross-Sectional SurveyCited by: 36
Author(s): Ismail A. Odetokun, Uduak Akpabio, Nma Bida Alhaji, K. T. Biobaku, Nurudeen Olalekan Oloso, Ibraheem Ghali-Mohammed, Asmau J. Biobaku, Victoria O. Adetunji, Folorunso Oludayo Fasina
Software Mentions: 1
Published: about 5 years ago
10.1186/s12961-020-00549-1
Strengthening the science of addressing antimicrobial resistance: a framework for planning, conducting and disseminating antimicrobial resistance intervention researchCited by: 26
Author(s): Susan Rogers Van Katwyk, Steven J. Hoffman, Marc Mendelson, Monica Taljaard, Jeremy Grimshaw
Software Mentions: 1
Published: over 4 years ago
10.1093/jacamr/dlaa012
Raising awareness of antimicrobial resistance among the general public in the UK: the role of public engagement activitiesCited by: 19
Author(s): James Redfern, Laura Bowater, Lisa Coulthwaite, Joanna Verran
Software Mentions: 1
Published: almost 5 years ago
10.3390/jcm10071348
Porous Media Computational Fluid Dynamics and the Role of the First Coil in the Embolization of Ruptured Intracranial AneurysmsCited by: 6
Author(s): Karol Wiśniewski, Bartłomiej Tomasik, Zbigniew Tyfa, P. Reorowicz, Ernest J. Bobeff, Ludomir Stefańczyk, Bartłomiej J. Posmyk, Krzysztof Jóźwik, Dariusz J. Jaskólski
Software Mentions: 1
Published: almost 4 years ago
10.1038/s41598-017-09287-x
Effects of short indels on protein structure and function in human genomesCited by: 49
Author(s): Maoxuan Lin, Sarah Whitmire, Jing Chen, Alvin Farrel, Xinghua Shi, Jun‐tao Guo
Software Mentions: 1
Published: over 7 years ago
10.1186/s13063-020-04897-9
Impact of a package of diagnostic tools, clinical algorithm, and training and communication on outpatient acute fever case management in low- and middle-income countries: protocol for a randomized controlled trialCited by: 13
Author(s): Olawale Salami, Philip Horgan, Catrin E. Moore, Abhishek Giri, Asadu Sserwanga, Ashish Pathak, Buddha Basnyat, François Kiemdé, Frank Smithuis, Freddy Eric Kitutu, Gajanan Phutke, Halidou Tinto, Heidi Hopkins, James Kapisi, Myo Maung Maung Swe, Neelam Taneja, Rita Baiden, Shanta Dutta, Adélaïde Compaoré, David Kaawa-Mafigiri, Rashida Hussein, Summita Udas Shakya, Vida Kukula, Stefano Ongarello, Anjana Tomar, Sarabjit Chadha, Kāmini Walia, Cassandra Kelly-Cirino, Piero Olliaro
Software Mentions: 1
Published: about 4 years ago
10.1186/s13017-020-00295-3
A proposal for a comprehensive approach to infections across the surgical pathwayCited by: 12
Author(s): Massimo Sartelli, Léonardo Pagani, Stefania Iannazzo, Maria Luisa Moro, Pierluigi Viale, Angelo Pan, Luca Ansaloni, Federico Coccolini, Marcello Mario D’Errico, Iris Agreiter, Giorgio Amadio Nespola, Francesco Barchiesi, Valeria Benigni, Raffaella Binazzi, Stefano Cappanera, Alessandro Chiodera, Valentina Cola, Daniela Corsi, Francesco Cortese, Massimo Crapis, Francesco Cristini, Alessandro D’Arpino, Belinda De Simone, Stefano Di Bella, Francesco Di Marzo, Abele Donati, Daniele Elisei, Massimo Fantoni, Anna Paula Ferrari, Domitilla Foghetti, Daniela Francisci, Gianni Gattuso, Andrea Giacometti, Guido Cesare Gesuelli, Cristina Marmorale, E. Martini, Marcello Meledandri, Rita Murri, Daniela Padrini, Dalia Palmieri, P. Pauri, Carla Rebagliati, Enrico Ricchizzi, Vittorio Sambri, Anna Maria Schimizzi, Walter Siquini, Loredana Scoccia, Giancarlo Scoppettuolo, Gabriele Sganga, Nadia Storti, Marcello Tavio, Giulio Toccafondi, Fabio Tumietto, Bruno Viaggi, Marco Vivarelli, Cristian Tranà, Melina Raso, Francesco M. Labricciosa, Swati Dhingra, Fausto Catena
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pmed.0010027
Distribution of Major Health Risks: Findings from the Global Burden of Disease StudyCited by: 230
Author(s): Anthony Rodgers, Majid Ezzati, Stephen Vander Hoorn, Alan D Lopez, Ruey-Bin Lin, Christopher J L Murray
Software Mentions: 1
Published: about 20 years ago
10.1128/mSphere.00441-18
Bifidobacterial Dominance of the Gut in Early Life and Acquisition of Antimicrobial ResistanceCited by: 61
Author(s): Diana H. Taft, Jinxin Liu, María X. Maldonado-Gómez, Samir Akre, Md. Nazmul Huda, Shaikh Meshbahuddin Ahmad, Charles B. Stephensen, David A. Mills
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0020201
Concentration Independent Modulation of Local Micromechanics in a Fibrin GelCited by: 75
Author(s): Maxwell A. Kotlarchyk, Samir Shreim, Martha B. Alvarez-Elizondo, Laura C. Estrada, Rahul Singh, Lorenzo Valdevit, Ekaterina Kniazeva, Enrico Gratton, Andrew J. Putnam, Elliot L. Botvinick
Software Mentions: 1
Published: over 13 years ago
10.1186/s12960-018-0270-3
Mapping educational opportunities for healthcare workers on antimicrobial resistance and stewardship around the worldCited by: 30
Author(s): Susan Rogers Van Katwyk, Sara Jones, Steven J. Hoffman
Software Mentions: 1
Published: almost 7 years ago