Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: ACDC
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ACDC
Analysis of Congruent Diversification Classes
1 version
Latest release: almost 3 years ago
345 downloads last month
Papers Mentioning ACDC 15
10.3389/fcell.2020.00234
Recent Advances in Computer-Assisted Algorithms for Cell Subtype Identification of Cytometry DataCited by: 17
Author(s): Peng Liu, Silvia Liu, Yusi Fang, Xiangning Xue, Jian Zou, George C. Tseng, Liza Konnikova
Software Mentions: 6
Published: over 4 years ago
10.1186/s13059-019-1917-7
A comparison framework and guideline of clustering methods for mass cytometry dataCited by: 71
Author(s): Xiao Liu, Weichen Song, Brandon Wong, Ting Zhang, Shunying Yu, Guan Ning Lin, Yiyang Li
Software Mentions: 5
Published: almost 5 years ago
10.1002/ctm2.206
Progress and applications of mass cytometry in sketching immune landscapesCited by: 21
Author(s): Ting Zhang, Antony R. Warden, Yiyang Li, Yiyang Li
Software Mentions: 4
Published: about 4 years ago
10.3390/app10186187
ACDC: Automated Cell Detection and Counting for Time-Lapse Fluorescence MicroscopyCited by: 7
Author(s): Leonardo Rundo, Andrea Tangherloni, Darren R. Tyson, Riccardo Betta, Carmelo Militello, Simone Spolaor, Marco S. Nobile, Daniela Besozzi, Alexander L R Lubbock, Vito Quaranta, Giancarlo Mauri, Carlos F. López, Paolo Cazzaniga
Software Mentions: 4
Published: about 4 years ago
10.1371/journal.pone.0178650
Community detection in sequence similarity networks based on attribute clusteringCited by: 3
Author(s): Janamejaya Chowdhary, Frank E. Löffler, Jeremy C. Smith
Software Mentions: 2
Published: over 7 years ago
10.1186/s13630-019-0061-z
New software for automated cilia detection in cells (ACDC)Cited by: 16
Author(s): Max C. Lauring, Tianqi Zhu, Wei Luo, Wenqi Wu, Feng Yu, Derek Toomre
Software Mentions: 2
Published: over 5 years ago
10.3390/genes12060911
A Deep-Learning Sequence-Based Method to Predict Protein Stability Changes Upon Genetic VariationsCited by: 10
Author(s): Corrado Pancotti, Silvia Benevenuta, Valeria Repetto, Giovanni Birolo, Emidio Capriotti, Tiziana Sanavia, Piero Fariselli
Software Mentions: 1
Published: over 3 years ago
10.1128/mBio.02022-17
Homoacetogenesis in Deep-Sea <i>Chloroflexi</i> , as Inferred by Single-Cell Genomics, Provides a Link to Reductive Dehalogenation in Terrestrial <i>Dehalococcoidetes</i>Cited by: 28
Author(s): Holly L. Sewell, Anne‐Kristin Kaster, Alfred M. Spormann
Software Mentions: 1
Published: almost 7 years ago
10.1021/acsearthspacechem.0c00333
New Particle Formation and Growth from Dimethyl Sulfide Oxidation by Hydroxyl RadicalsCited by: 12
Author(s): Bernadette Rosati, Sofus Christiansen, Robin Wollesen de Jonge, Pontus Roldin, Mads Mørk Jensen, Kai Wang, Shamjad P. Moosakutty, Ditte L. Thomsen, Camilla Salomonsen, Noora Hyttinen, Jonas Elm, Anders Feilberg, Marianne Glasius, Merete Bilde
Software Mentions: 1
Published: over 3 years ago
10.1021/acs.jpca.0c10972
Heterogeneous Nucleation of Butanol on NaCl: A Computational Study of Temperature, Humidity, Seed Charge, and Seed Size EffectsCited by: 5
Author(s): Antti Toropainen, Juha Kangasluoma, Theo Kurtén, Hanna Vehkamäki, Fatemeh Keshavarz, Jakub Kubečka
Software Mentions: 1
Published: over 3 years ago
10.1186/s12888-019-2134-3
Cognitive behavioral treatment for depressed adolescents: results from a cluster randomized controlled trial of a group courseCited by: 12
Author(s): Thormod Idsøe, Serap Keles, Asgeir Røyrhus Olseth, Terje Ogden
Software Mentions: 1
Published: over 5 years ago
10.1186/s12888-016-0954-y
Study protocol for a randomized controlled trial of a group cognitive-behavioral course for depressed adolescentsCited by: 4
Author(s): Thormod Idsøe, Serap Keles
Software Mentions: 1
Published: over 8 years ago
10.1093/bioinformatics/btx054
Automated cell type discovery and classification through knowledge transferCited by: 40
Author(s): Hao-Chih Lee, Roman Kosoy, Christine Becker, Joel T. Dudley, Brian Kidd
Software Mentions: 1
Published: almost 8 years ago
10.1140/epje/s10189-021-00031-y
CiliaQ: a simple, open-source software for automated quantification of ciliary morphology and fluorescence in 2D, 3D, and 4D imagesCited by: 36
Author(s): Jan N. Hansen, Sebastian Rassmann, Birthe Stüven, Nathalie Jurisch‐Yaksi, Dagmar Wachten
Software Mentions: 1
Published: almost 4 years ago
10.3389/fcell.2021.623753
Primary Cilia Formation Does Not Rely on WNT/β-Catenin SignalingCited by: 10
Author(s): Ondřej Bernatík, Petra Paclíková, Anna Vyhlídalová Kotrbová, Vı́tězslav Bryja, Lukáš Čajánek
Software Mentions: 1
Published: over 3 years ago