Ecosyste.ms: Papers

10.1186/s12870-017-1103-6

Avocado fruit maturation and ripening: dynamics of aliphatic acetogenins and lipidomic profiles from mesocarp, idioblasts and seed
Cited by: 32
Author(s): Carlos E. Rodríguez López, Carmen Hernández-Brenes, Víctor Treviño, Rocío I. Díaz de la Garza
Software Mentions: 6
Published: about 7 years ago

10.1186/s13321-019-0384-1

Open-source QSAR models for pKa prediction using multiple machine learning approaches
Cited by: 82
Author(s): Kamel Mansouri, Neal F. Cariello, Alexandru Korotcov, Valery Tkachenko, Christopher M. Grulke, Catherine S. Sprankle, David Allen, Warren Casey, Nicole Kleinstreuer, Antony J. Williams
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pone.0190456

Mitochondrial DNA depletion by ethidium bromide decreases neuronal mitochondrial creatine kinase: Implications for striatal energy metabolism
Cited by: 18
Author(s): Emily B. Warren, Aidan Aicher, Joshua P. Fessel, Christine Konradi
Software Mentions: 4
Published: almost 7 years ago

10.7554/eLife.35987

Antibiotic-induced changes in the microbiota disrupt redox dynamics in the gut
Cited by: 104
Author(s): Aspen T. Reese, Eugenia H. Cho, Bruce Klitzman, Scott P. Nichols, Natalie A. Wisniewski, Max M. Villa, Heather K. Durand, Sharon Jiang, Firas S Midani, Sai N Nimmagadda, Thomas M. O’Connell, Justin P. Wright, Marc A. Deshusses, Lawrence A. David
Software Mentions: 4
Published: over 6 years ago

10.1186/s40170-020-00229-2

Metabolic plasticity of IDH1-mutant glioma cell lines is responsible for low sensitivity to glutaminase inhibition
Cited by: 13
Author(s): Victor Ruiz‐Rodado, Adrian Lita, Tyrone Dowdy, Orieta Celiku, Alejandra Cavazos Saldana, Herui Wang, Chunzhang Yang, Raj Chari, Aiguo Li, Wei Zhang, Hua Song, Meili Zhang, Susie Ahn, Dionne L. Davis, Xiang Chen, Zhengping Zhuang, Christel Herold‐Mende, Kylie J. Walters, Mark R. Gilbert, Mioara Larion
Software Mentions: 4
Published: about 4 years ago

10.1016/j.dib.2016.01.016

Molecular determinants and interaction data of cyclic peptide inhibitor with the extracellular domain of TrkB receptor
Cited by: 5
Author(s): Nitin Chitranshi, Vivek Kumar Gupta, Yogita Dheer, Veer Bala Gupta, Roshana Vander Wall, Stuart L. Graham
Software Mentions: 3
Published: over 8 years ago

10.3390/molecules23071635

Investigation of Hydro-Lipophilic Properties of N-Alkoxyphenylhydroxynaphthalenecarboxamides †
Cited by: 11
Author(s): Iva Kapustíková, Andrzej Bąk, Tomáš Goněc, Jiří Kos, Violetta Kozik, Josef Jampílek
Software Mentions: 3
Published: over 6 years ago

10.3389/fbioe.2019.00214

Computational Assessment of the Pharmacological Profiles of Degradation Products of Chitosan
Cited by: 27
Author(s): Diana Larisa Roman, Marin Roman, Claudia Som, Mélanie Schmutz, Edgar García Hernández, Peter Wick, Tommaso Casalini, Giuseppe Perale, Vasile Ostafe, Adriana Isvoran
Software Mentions: 3
Published: about 5 years ago

10.3389/fmolb.2021.686770

NMR Metabolite Profiles of the Bivalve Mollusc Mytilus galloprovincialis Before and After Immune Stimulation With Vibrio splendidus
Cited by: 8
Author(s): Riccardo Frizzo, Enrico Bortoletto, Tobia Riello, Luigi Leanza, Elisabetta Schievano, Paola Venier, Stefano Mammi
Software Mentions: 3
Published: about 3 years ago

10.3390/molecules26040793

Identification and Analytical Characterization of a Novel Synthetic Cannabinoid-Type Substance in Herbal Material in Europe
Cited by: 7
Author(s): Emmanouil D. Tsochatzis, Joao Alberto Lopes, Margaret V. Holland, Fabiano Reniero, G Palmieri, Claude Guillou
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-019-41272-4

Conjugates of methylene blue with γ-carboline derivatives as new multifunctional agents for the treatment of neurodegenerative diseases
Cited by: 22
Author(s): С. О. Бачурин, Галина Ф. Махаева, E. F. Shevtsova, Natalia P. Boltneva, N. V. Kovaleva, Sofya V. Lushchekina, Е. В. Рудакова, L. G. Dubova, Daria V. Vinogradova, В. Б. Соколов, А. Yu. Aksinenko, Владимир Петрович Фисенко, Rudy J. Richardson, Gjumrakch Aliev
Software Mentions: 2
Published: over 5 years ago

10.3390/antiox10040624

Natural Chain-Breaking Antioxidants and Their Synthetic Analogs as Modulators of Oxidative Stress
Cited by: 10
Author(s): V. D. Kancheva, Maria Antonietta Dettori, D. Fabbri, Petko Alov, Silvia Angelova, Adriana Slavova-Kazakova, Paola Carta, Valery A. Menshov, Olga I. Yablonskaya, Aleksei V. Trofimov, Ivanka Tsakovska, Luciano Saso
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0101432

A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology
Cited by: 37
Author(s): Haiyu Xu, Yanqiong Zhang, Yun Lei, Xiumei Gao, Huaqiang Zhai, Na Lin, Shi-Huan Tang, Rixin Liang, Yan Ma, Defeng Li, Yi Zhang, Guoding Zhu, Hongjun Yang, Luqi Huang
Software Mentions: 2
Published: over 10 years ago

10.3389/fchem.2018.00246

An Immunopharmacoinformatics Approach in Development of Vaccine and Drug Candidates for West Nile Virus
Cited by: 14
Author(s): Mohammad Uzzal Hossain, Chaman Ara Keya, Keshob Chandra Das, Abu Hashem, Taimur Md Omar, Mukhtar A. Khan, Zaman Shah, Md. Salimullah
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-020-73203-z

Computational analysis of eugenol inhibitory activity in lipoxygenase and cyclooxygenase pathways
Cited by: 28
Author(s): Francisco das Chagas Pereira de Andrade, Anderson Nogueira Mendes
Software Mentions: 2
Published: about 4 years ago

10.3389/fchem.2020.624678

Identification of Chalcone Derivatives as Inhibitors of Leishmania infantum Arginase and Promising Antileishmanial Agents
Cited by: 25
Author(s): Andreza R. Garcia, Danielle Maria Perpétua de Oliveira, Jéssica Barbosa de Jesus, Alessandra Mendonça Teles de Souza, Ana Carolina Rennó Sodero, Alane Beatriz Vermelho, Ivana Correa Ramos Leal, Rodrigo O. M. A. de Souza, Leandro S. M. Miranda, Anderson S. Pinheiro, Igor A. Rodrigues
Software Mentions: 2
Published: almost 4 years ago

10.1016/j.bbrep.2016.03.004

Molecular docking, a tool to determine interaction of CuO and TiO 2 nanoparticles with human serum albumin
Cited by: 18
Author(s): Sandesh Chibber, Irshad Ahmad
Software Mentions: 2
Published: over 8 years ago

10.3390/metabo9030050

Delta-Tocotrienol Modulates Glutamine Dependence by Inhibiting ASCT2 and LAT1 Transporters in Non-Small Cell Lung Cancer (NSCLC) Cells: A Metabolomic Approach
Cited by: 21
Author(s): Lichchavi D. Rajasinghe, Melanie Hutchings, Smiti Gupta
Software Mentions: 2
Published: over 5 years ago

10.1186/s12906-016-1354-z

Protective effect of 3-O-methyl quercetin and kaempferol from Semecarpus anacardium against H2O2 induced cytotoxicity in lung and liver cells
Cited by: 43
Author(s): Ajay Kumar, Ganesh Babu Bevara, Laxmi Koteswaramma Kaja, Anil Kumar Badana, Rama Rao Malla
Software Mentions: 2
Published: about 8 years ago

10.7717/peerj.4962

Synthesis, enzyme inhibitory kinetics mechanism and computational study of<i>N</i>-(4-methoxyphenethyl)-<i>N</i>-(substituted)-4-methylbenzenesulfonamides as novel therapeutic agents for Alzheimer’s disease
Cited by: 8
Author(s): Muhammad Athar Abbasi, Mubashir Hassan, - Aziz-Ur-Rehman, Sabahat Zahra Siddiqui, Syed Adnan Ali Shah, Hussain Raza
Software Mentions: 2
Published: over 6 years ago

10.3389/fphar.2016.00153

Therapeutics Insight with Inclusive Immunopharmacology Explication of Human Rotavirus A for the Treatment of Diarrhea
Cited by: 6
Author(s): Mohammad Uzzal Hossain, Abu Hashem, Chaman Ara Keya, Md. Salimullah
Software Mentions: 2
Published: over 8 years ago

10.1186/s12906-016-1047-7

Effect of Cosmos caudatus (Ulam raja) supplementation in patients with type 2 diabetes: Study protocol for a randomized controlled trial
Cited by: 2
Author(s): Shi-Hui Cheng, Amin Ismail, Anthony Joseph, Ooi Chuan Ng, Azizah Abdul Hamid, Barakatun Nisak Mohd Yusof
Software Mentions: 2
Published: over 8 years ago

10.1186/1471-2164-13-36

A metabolomic strategy defines the regulation of lipid content and global metabolism by Δ9 desaturases in Caenorhabditis elegans
Cited by: 28
Author(s): Cecilia Castro, Funda Sar, W. Robert Shaw, Masanori Mishima, Eric A. Miska, Julian L. Griffin
Software Mentions: 2
Published: almost 13 years ago

10.1099/vir.0.069591-0

A role for vaccinia virus protein C16 in reprogramming cellular energy metabolism
Cited by: 36
Author(s): Michela Mazzon, Cecilia Castro, Lee D. Roberts, Julian L. Griffin, Geoffrey L. Smith
Software Mentions: 2
Published: almost 10 years ago

10.3390/ht8010002

Low-Field, Benchtop NMR Spectroscopy as a Potential Tool for Point-of-Care Diagnostics of Metabolic Conditions: Validation, Protocols and Computational Models
Cited by: 61
Author(s): Benita Percival, Martin Grootveld, Miles Gibson, Yasan Osman, Marco Molinari, Fatemeh Jafari, Tarsem Sahota, Mark Martin, Federico Casanova, Melissa L. Mather, Mark Edgar, Jinit Masania, Philippe B. Wilson
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0051712

HR-MAS MR Spectroscopy of Breast Cancer Tissue Obtained with Core Needle Biopsy: Correlation with Prognostic Factors
Cited by: 48
Author(s): Ji Soo Choi, Hyeon Man Baek, Suhkmann Kim, Min Jung Kim, Ji Hyun Youk, Hee Jung Moon, Kyunghwa Han, Dong hyun Kim, Kyung Sik Kim, Ja Seung Koo
Software Mentions: 2
Published: almost 12 years ago

10.3390/ijms12096194

Fabrication, Modeling and Characterization of Multi-Crosslinked Methacrylate Copolymeric Nanoparticles for Oral Drug Delivery
Cited by: 18
Author(s): Ndidi C. Ngwuluka, Viness Pillay, Yahya E. Choonara, Girish Modi, Dinesh Naidoo, Lisa C. du Toit, Pradeep Kumar, Valence M. K. Ndesendo, Riaz A. Khan
Software Mentions: 2
Published: about 13 years ago

10.3390/molecules15010288

Investigating the Activity Spectrum for Ring-Substituted 8-Hydroxyquinolines
Cited by: 43
Author(s): Robert Musioł, Josef Jampílek, Jacek E. Nycz, Matúš Peško, James A. Carroll, Katarína Kráľová, Marcela Vejsová, Jim O’Mahony, Aidan Coffey, Anna Mrozek, Jarosław Polański
Software Mentions: 2
Published: almost 15 years ago

10.1111/ahg.12065

On the Performance of Multiple Imputation Based on Chained Equations in Tackling Missing Data of the African α 3.7 ‐Globin Deletion in a Malaria Association Study
Cited by: 5
Author(s): Nuno Sepúlveda, Alphaxard Manjurano, Chris Drakeley, Taane G. Clark
Software Mentions: 2
Published: over 10 years ago

10.1186/1758-2946-5-5

Drug-likeness analysis of traditional Chinese medicines: 2. Characterization of scaffold architectures for drug-like compounds, non-drug-like compounds, and natural compounds from traditional Chinese medicines
Cited by: 23
Author(s): Sheng Tian, Youyong Li, Junmei Wang, Xiaojie Xu, Lei Xu, Xiaohong Wang, Lei Chen, Tingjun Hou
Software Mentions: 2
Published: almost 12 years ago

10.3390/ijms21113765

New Tetrahydroacridine Hybrids with Dichlorobenzoic Acid Moiety Demonstrating Multifunctional Potential for the Treatment of Alzheimer’s Disease
Cited by: 4
Author(s): Kamila Czarnecka, Małgorzata Girek, Przemysław Wójtowicz, Paweł Kręcisz, Robert Skibiński, Jakub Jończyk, Kamil Łątka, Marek Bajda, Anna Walczak, Grzegorz Galita, Jacek Kabziński, Ireneusz Majsterek, Piotr Szymczyk, Paweł Szymański
Software Mentions: 2
Published: over 4 years ago

10.1002/prp2.305

Physiologically based pharmacokinetic modeling of tea catechin mixture in rats and humans
Cited by: 16
Author(s): F. C. P. Law, Meicun Yao, Huichang Bi, Stephen Lam
Software Mentions: 2
Published: over 7 years ago

10.1016/j.chroma.2016.04.040

Analysis of polar urinary metabolites for metabolic phenotyping using supercritical fluid chromatography and mass spectrometry
Cited by: 56
Author(s): Arundhuti Sen, Christopher S. Knappy, Matthew R. Lewis, Robert S. Plumb, Ian D. Wilson, Jeremy K. Nicholson, Norman W. Smith
Software Mentions: 2
Published: over 8 years ago

10.3390/molecules26040960

Comparative Research of Chemical Profiling in Different Parts of Fissistigma oldhamii by Ultra-High-Performance Liquid Chromatography Coupled with Hybrid Quadrupole-Orbitrap Mass Spectrometry
Cited by: 6
Author(s): Haibo Hu, Lee-Fong Yau, Jinnian Peng, HU Bao-zhong, Jialin Li, Yaoli Li, Hao Huang
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0161038

The Role of High-Resolution Magic Angle Spinning 1H Nuclear Magnetic Resonance Spectroscopy for Predicting the Invasive Component in Patients with Ductal Carcinoma In Situ Diagnosed on Preoperative Biopsy
Cited by: 23
Author(s): Eun Young Chae, Hee Jung Shin, Suhkmann Kim, Hyeon‐Man Baek, Dahye Yoon, Siwon Kim, Ye Eun Shim, Hak Hee Kim, Joo Hee, Woo Jung Choi, Jeong Hyun Lee, Ji Hoon Shin, Hee Jin Lee, Gyungyub Gong
Software Mentions: 2
Published: about 8 years ago

10.18632/oncotarget.18822

Magnetic resonance metabolic profiling of estrogen receptor-positive breast cancer: correlation with currently used molecular markers
Cited by: 8
Author(s): Ji Soo Choi, Dahye Yoon, Ja Seung Koo, Siwon Kim, Vivian Youngjean Park, Min Jung Kim, Suhkmann Kim
Software Mentions: 2
Published: over 7 years ago

10.1080/14756366.2021.1929949

Diaryl azo derivatives as anti-diabetic and antimicrobial agents: synthesis, <i>in vitro</i>, kinetic and docking studies
Cited by: 15
Author(s): Tehreem Tahir, Mirza Imran Shahzad, Rukhsana Tabassum, Muhammad Rafiq, Muhammad Ashfaq, Mubashir Hassan, Katarzyna Kotwica-Mojzych, Mariusz Mojzych
Software Mentions: 2
Published: almost 4 years ago

10.1021/acschembio.1c00433

Reconstitution and Structural Analysis of a HECT Ligase-Ubiquitin Complex via an Activity-Based Probe
Cited by: 10
Author(s): Raji R. Nair, Ayshwarya Seenivasan, Bing Liu, Dan Chen, E.D. Lowe, Sonja Lorenz
Software Mentions: 2
Published: over 3 years ago

10.3390/molecules17033407

Modeling Chemical Interaction Profiles: II. Molecular Docking, Spectral Data-Activity Relationship, and Structure-Activity Relationship Models for Potent and Weak Inhibitors of Cytochrome P450 CYP3A4 Isozyme
Cited by: 21
Author(s): Yunfeng Tie, Brooks McPhail, Huasheng Hong, Bruce A. Pearce, Laura K. Schnackenberg, Weigong Ge, Dan A. Buzatu, Jon G. Wilkes, James C. Fuscoe, Weida Tong, Bruce A. Fowler, Richard D. Beger, Eugene Demchuk
Software Mentions: 2
Published: over 12 years ago

10.3390/molecules23092402

Characterization of α-Glucosidase Inhibitors from Clinacanthus nutans Lindau Leaves by Gas Chromatography-Mass Spectrometry-Based Metabolomics and Molecular Docking Simulation
Cited by: 42
Author(s): Suganya Murugesu, Zalikha Ibrahim, Qamar Uddin Ahmed, Nik Mohd. Idris Nik Yusoff, Bisha Fathamah Uzir, Vikneswari Perumal, Faridah Abas, Khozirah Saari, Hesham R. El‐Seedi, Alfi Khatib
Software Mentions: 2
Published: about 6 years ago

10.3390/ma13215013

Experimental and Theoretical Insights into the Synergistic Effect of Iodide Ions and 1-Acetyl-3-Thiosemicarbazide on the Corrosion Protection of C1018 Carbon Steel in 1 M HCl
Cited by: 6
Author(s): Aeshah Hassan Alamri
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0083866

Magnetic Resonance Metabolic Profiling of Breast Cancer Tissue Obtained with Core Needle Biopsy for Predicting Pathologic Response to Neoadjuvant Chemotherapy
Cited by: 40
Author(s): Ji Soo Choi, Hyeon Man Baek, Suhkmann Kim, Min Jung Kim, Ji Hyun Youk, Hee Jung Moon, Youn Ki Nam
Software Mentions: 2
Published: almost 11 years ago

10.1002/rcm.8571

A complex matrix characterization approach, applied to cigarette smoke, that integrates multiple analytical methods and compound identification strategies for non‐targeted liquid chromatography with high‐resolution mass spectrometry
Cited by: 17
Author(s): Daniel Arndt, Christian J. Wachsmuth, Christoph Buchholz, M.C. Bentley
Software Mentions: 2
Published: almost 5 years ago

10.1038/s42003-020-01322-4

Retrograde signaling by a mtDNA-encoded non-coding RNA preserves mitochondrial bioenergetics
Cited by: 13
Author(s): Anna Blumental‐Perry, Raul Jobava, Ilya Bederman, A. J. Degar, Harshavardhan Kenche, Bo Guan, Kusum Pandit, Noam Perry, Neil Molyneaux, Jianrong Wu, E. Prendergas, Z.-W. Ye, Jie Zhang, Carl Nelson, Farida Ahangari, Dawid Krokowski, Susan H. Guttentag, Phillip Linden, Danyelle M. Townsend, Alexander Miron, Min Kang, Naftali Kaminski, Yaron Perry, Maria Hatzoglou
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-017-02676-2

In-situ freeze-drying - forming amorphous solids directly within capsules: An investigation of dissolution enhancement for a poorly soluble drug
Cited by: 29
Author(s): Abdulmalik Alqurshi, K. L. Andrew Chan, Paul G. Royall
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-04934-9

Large perturbations in CO2 flux and subsequent chemosynthesis are induced in agricultural soil by the addition of elemental sulfur
Cited by: 8
Author(s): Brian P. Kelleher, Paul Flanagan, Kris M. Hart, André J. Simpson, Seth F. Oppenheimer, Brian T. Murphy, Shane S. O’Reilly, Sean Jordan, Anthony Grey, A. D. Ibrahim, Christopher C. R. Allen
Software Mentions: 2
Published: over 7 years ago

10.3390/ph14090944

Less Polar Compounds and Targeted Antioxidant Potential (In Vitro and In Vivo) of Codium adhaerens C. Agardh 1822
Cited by: 10
Author(s): Sanja Radman, Ana-Marija Cikoš, Ivana Flanjak, Sanja Babić, Lara Čižmek, Drago Šubarić, Rozelindra Čož‐Rakovac, Stela Jokić, Igor Jerković
Software Mentions: 1
Published: about 3 years ago

10.3390/ph14090847

Alpha-Synuclein PET Tracer Development—An Overview about Current Efforts
Cited by: 45
Author(s): Špela Korat, Natasha Bidesi, Federica Bonanno, Adriana Di Nanni, Anh Nguyên Nhât Hoàng, Kristina Herfert, Andreas Maurer, Umberto Maria Battisti, Gregory D. Bowden, David Thonon, Daniëlle J. Vugts, Albert D. Windhorst, Matthias M. Herth
Software Mentions: 1
Published: about 3 years ago

10.3390/ph5020169

Radiosynthesis and Radiotracer Properties of a 7-(2-[18F]Fluoroethoxy)-6-methoxypyrrolidinylquinazoline for Imaging of Phosphodiesterase 10A with PET
Cited by: 16
Author(s): Uta Funke, Winnie Deuther‐Conrad, Gregor Schwan, Aurélie Maisonial, Matthias Scheunemann, Steffen Fischer, Achim Hiller, D. Briel, Peter Brust
Software Mentions: 1
Published: almost 13 years ago

10.3390/pharmaceutics11010017

Partial Solvation Parameters of Drugs as a New Thermodynamic Tool for Pharmaceutics
Cited by: 9
Author(s): Andreas Niederquell, Nicole Wyttenbach, Martin Kuentz, Costas Panayiotou
Software Mentions: 1
Published: almost 6 years ago

10.3390/pharmaceutics13020175

Investigation of the Factors Responsible for the Poor Oral Bioavailability of Acacetin in Rats: Physicochemical and Biopharmaceutical Aspects
Cited by: 13
Author(s): Dong-Gyun Han, Eunju Cha, Jeongmin Joo, Ji Sun Hwang, Sang-Hyun Kim, Taeuk Park, Yoo-Seong Jeong, Han‐Joo Maeng, Sang-Bum Kim, In‐Soo Yoon
Software Mentions: 1
Published: almost 4 years ago

10.1007/s11095-016-1983-4

Development of a Novel Quantitative Structure-Activity Relationship Model to Accurately Predict Pulmonary Absorption and Replace Routine Use of the Isolated Perfused Respiring Rat Lung Model
Cited by: 28
Author(s): Chris D. Edwards, Chris Luscombe, Peter Eddershaw, Edith M. Hessel
Software Mentions: 1
Published: over 8 years ago

10.14814/phy2.13613

Human physiological and metabolic responses to an attempted winter crossing of Antarctica: the effects of prolonged hypobaric hypoxia.
Cited by: 17
Author(s): Katie A. O’Brien, Ross D. Pollock, Mike Stroud, Rob J. Lambert, Alex Kumar, R. Andrew Atkinson, David A. Green, Ana Antón-Solanas, Lindsay M. Edwards, Steve D. R. Harridge
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0203306

Preservative effect of Chinese cabbage (Brassica rapa subsp. pekinensis) extract on their molecular docking, antioxidant and antimicrobial properties
Cited by: 18
Author(s): Deog‐Hwan Oh, Ramachandran Chellia, Kandasamy Saravanakumar, Suresh Mandava, Imran Khan, Charles Nkufi Tango, Mohammad Shakhawat Hussain, Eric Banan‐Mwine Daliri, Se‐Hun Kim, S. Ramakrishnan, Myeong‐Hyeon Wang, Jong-Kook Lee, Joong‐Ho Kwon, S. Chandrashekar
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0038701

Biochemical and Molecular Characterization of the Gentisate Transporter GenK in Corynebacterium glutamicum
Cited by: 24
Author(s): Ying Xu, Songhe Wang, Han-Chieh Chao, Shuang‐Jiang Liu, Ning‐Yi Zhou
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0032943

A Mitochondria-Dependent Pathway Mediates the Apoptosis of GSE-Induced Yeast
Cited by: 15
Author(s): Sishuo Cao, Wentao Xu, Nan Zhang, Yan Wang, Yunbo Luo, Xiaoyun He, Kunlun Huang
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0120221

Modeling the Interaction between Quinolinate and the Receptor for Advanced Glycation End Products (RAGE): Relevance for Early Neuropathological Processes
Cited by: 14
Author(s): Iris N. Serratos, Pilar Castellanos, Nina Pastor, César Millán‐Pacheco, Daniel Rembao, Ruy Pérez‐Montfort, Nallely Cabrera, Francisco Reyes-Espinosa, Paulina Díaz-Garrido, Ámbar López-Macay, Karina Martínez-Flores, Alberto López‐Reyes, Aurora Sánchez-García, Elvis Cuevas, Abel Santamarı́a
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0207784

Automated algorithms combining structure and function outperform general ophthalmologists in diagnosing glaucoma
Cited by: 23
Author(s): Leonardo Shigueoka, José Paulo Cabral de Vasconcellos, Rui Barroso Schimiti, Arlete Barbosa dos Reis, Gabriel Ozeas de Oliveira, Edson Satoshi Gomi, Jayme R Vianna, Renato Lisboa, Felipe A. Medeiros, Vital Paulino Costa
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0088908

Identification and Characterization of Sebaceous Gland Atrophy-Sparing DGAT1 Inhibitors
Cited by: 9
Author(s): Eric S. Muise, Y. Zhu, Andreas Verras, Bindhu V. Karanam, Judith N. Gorski, Drew T. Weingarth, Hua Lin, Joyce Hwa, John R. Thompson, Guanghui Hu, Jian Liu, Shuwen He, Robert J. DeVita, Dong‐Ming Shen, Shirly Pinto
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0183440

Different methods for volatile sampling in mammals
Cited by: 25
Author(s): Marlen Kücklich, Manfred Möller, Andrea Marcillo, A. Einspanier, B. Weiß, Claudia Birkemeyer, Anja Widdig
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0052205

In Vitro Evaluation of ESE-15-ol, an Estradiol Analogue with Nanomolar Antimitotic and Carbonic Anhydrase Inhibitory Activity
Cited by: 24
Author(s): Barend André Stander, Fourie Joubert, Chingkuang Tu, Katherine H. Sippel, Robert McKenna, Annie M. Joubert
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0076067

Probing the Interaction of a Therapeutic Flavonoid, Pinostrobin with Human Serum Albumin: Multiple Spectroscopic and Molecular Modeling Investigations
Cited by: 81
Author(s): Shevin Rizal Feroz, Saharuddin Bin Mohamad, Zarith S. D. Bakri, Sri Nurestri Abd Malek, Saad Tayyab
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0114106

Intrinsic Thermodynamics and Structure Correlation of Benzenesulfonamides with a Pyrimidine Moiety Binding to Carbonic Anhydrases I, II, VII, XII, and XIII
Cited by: 19
Author(s): Miglė Kišonaitė, Asta Zubrienė, Edita Čapkauskaitė, A. Smirnov, Joana Smirnovienė, Visvaldas Kairys, Vilma Michailovienė, E. Manakova, S. Gražulis, Daumantas Matulis
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0214216

New lupeol esters as active substances in the treatment of skin damage
Cited by: 21
Author(s): Magdalena Malinowska, Barbara Mirosław, Elżbieta Sikora, Jan Ogonowski, Agnieszka M. Wojtkiewicz, Maciej Szaleniec, Monika Pasikowska‐Piwko, Irena Eris
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0135292

Drug Development in Conformational Diseases: A Novel Family of Chemical Chaperones that Bind and Stabilise Several Polymorphic Amyloid Structures
Cited by: 15
Author(s): Marquiza Sablón-Carrazana, I. González Fernández, Alberto Bencomo, Reyna Lara‐Martínez, Suchitil Rivera-Marrero, Guadalupe Domínguez, Rafaela Pérez-Perera, Luis Felipe Jiménez-Garcı́a, Nelly Altamirano-Bustamante, Massiel Diaz-Delgado, Fernand Vedrenne, Lina Rivillas‐Acevedo, Karina Pastén-Hidalgo, María de Lourdes Segura-Valdéz, Sergio Islas-Andrade, Eulalia Garrido‐Magaña, Alejandro Perera-Pintado, Anaís Prats-Capote, Chryslaine Rodríguez-Tanty, Myriam M. Altamirano-Bustamante
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0111472

Lack of Involvement of CEP Adducts in TLR Activation and in Angiogenesis
Cited by: 6
Author(s): John S. Gounarides, Jennifer Cobb, Jing Zhou, Frank R. Cook, Yijun Xiong, Hong Yin, Erik Meredith, Chang Rao, Qian Huang, Yuanyuan Xu, Karen Anderson, A. De Erkenez, Sha-Mei Liao, Maura Crowley, Natasha Buchanan, Stephen Poor, Yubin Qiu, Elizabeth Fassbender, Siyuan Shen, Amber Woolfenden, Amy Jensen, Rosemarie Cepeda, Bijan Etemad-Gilbertson, Shelby Giza, Muneto Mogi, Bruce Jaffee, Sassan M. Azarian
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0160091

Influence of LAR and VAR on Para-Aminopyridine Antimalarials Targetting Haematin in Chloroquine-Resistance
Cited by: 4
Author(s): David C. Warhurst, J. Cymerman Craig, K. Saki Raheem
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0084575

Phenylthiophenecarboxamide Antagonists of the Olfactory Receptor Co-Receptor Subunit from a Mosquito
Cited by: 18
Author(s): Sisi Chen, Charles W. Luetje
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0084531

Anti-Prion Activity of a Panel of Aromatic Chemical Compounds: In Vitro and In Silico Approaches
Cited by: 40
Author(s): Natalia Ferreira, Icaro A. Marques, Wesley A. Conceição, Bruno Macedo, Clarice S C Machado, Alessandra Mascarello, Louise Domeneghini Chiaradia-Delatorre, Rosendo A. Yunes, Ricardo José Nunes, Andrew G. Hughson, Lynne D. Raymond, Pedro Geraldo Pascutti, Byron Caughey, Yraima Cordeiro
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0178069

Carvacrol derivatives as mushroom tyrosinase inhibitors; synthesis, kinetics mechanism and molecular docking studies
Cited by: 46
Author(s): Zaman Ashraf, Muhammad Rafiq, Humaira Nadeem, Mubashir Hassan, Samina Afzal, Muhammad Waseem, Khurram Afzal, Jalifah Latip
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers13081815

The Leloir Cycle in Glioblastoma: Galactose Scavenging and Metabolic Remodeling
Cited by: 8
Author(s): Martyn A. Sharpe, Omkar B. Ijare, David S. Baskin, Alexandra M. Baskin, Brianna N. Baskin, Kumar Pichumani
Software Mentions: 1
Published: over 3 years ago

10.1002/cmdc.201900621

Flexible Fragment Growing Boosts Potency of Quorum‐Sensing Inhibitors against <i>Pseudomonas aeruginosa</i> Virulence
Cited by: 21
Author(s): Michael Zender, F. Witzgall, Alexander F. Kiefer, Benjamin Kirsch, Christine K. Maurer, Andreas M. Kany, Ningna Xu, Stefan Schmelz, Carsten Börger, Wulf Blankenfeldt, Martin Empting
Software Mentions: 1
Published: almost 5 years ago

10.1111/cbdd.13024

1,3-Bis(aryloxy)propan-2-ols as potential antileishmanial agents
Cited by: 1
Author(s): Stefânia Neiva Lavorato, Mariana C. Duarte, Daniela P. Lage, Carlos Alberto Pereira Tavares, Eduardo Antônio Ferraz Coelho, Ricardo José Alves
Software Mentions: 1
Published: over 7 years ago

10.1186/1752-153X-7-107

Structures in solid state and solution of dimethoxy curcuminoids: regioselective bromination and chlorination
Cited by: 13
Author(s): Petra Galer, Amalija Golobič, J. Koller, Berta Košmrlj, Boris Šket
Software Mentions: 1
Published: over 11 years ago

10.1186/1749-8546-9-23

Amygdalin isolated from Semen Persicae (Tao Ren) extracts induces the expression of follistatin in HepG2 and C2C12 cell lines
Cited by: 21
Author(s): Chuanbin Yang, Xuechen Li, Jianhui Rong
Software Mentions: 1
Published: about 10 years ago

10.1007/s13346-020-00864-8

Predicting topical drug clearance from the skin
Cited by: 12
Author(s): Maria Alice Maciel Tabosa, Magdalena Hoppel, Annette L. Bunge, Richard H. Guy, M. Begoña Delgado‐Charro
Software Mentions: 1
Published: about 4 years ago

10.4061/2011/561841

Phosphorylcholine Phosphatase: A Peculiar Enzyme of <i>Pseudomonas aeruginosa</i>
Cited by: 10
Author(s): Carlos E. Domenech, Lisandro H. Otero, Paola Rita Beassoni, Ángela Teresita Lisa
Software Mentions: 1
Published: about 13 years ago

10.12688/f1000research.22090.2

Machine learning meets pKa
Cited by: 14
Author(s): Marcel Baltruschat, Paul Czodrowski
Software Mentions: 1
Published: over 4 years ago

10.3402/fnr.v60.29580

Extract from a mutant Rhodobacter sphaeroides as an enriched carotenoid source
Cited by: 7
Author(s): Chih-Chiang Wang, Shangwu Ding, Kuo-Hsun Chiu, Wen-Sheng Liu, Tai-Jung Lin, Zhi‐Hong Wen
Software Mentions: 1
Published: almost 9 years ago

10.3390/foods6110096

1H NMR and Multivariate Analysis for Geographic Characterization of Commercial Extra Virgin Olive Oil: A Possible Correlation with Climate Data
Cited by: 28
Author(s): Domenico Rongai, Nadia Sabatini, Laura Del Coco, Enzo Perri, Paolo Del Re, N. De Simone, Donato Marchegiani, Francesco Paolo Fanizzi
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2020.00139

Current Antivirals and Novel Botanical Molecules Interfering With Herpes Simplex Virus Infection
Cited by: 53
Author(s): Diana Álvarez, Esteban Castillo, Luisa F. Duarte, José Arriagada, Nicolás Corrales, Mónica A. Farías, Adolfo Henríquez, Cristian Agurto-Muñoz, Pablo A. González
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmolb.2020.613401

Molecular Docking Studies on the Anti-viral Effects of Compounds From Kabasura Kudineer on SARS-CoV-2 3CLpro
Cited by: 40
Author(s): Savariar Vincent, Selvaraj Arokiyaraj, Muthupandian Saravanan, Manoj Dhanraj
Software Mentions: 1
Published: almost 4 years ago

10.3389/fphar.2017.00232

In Vitro and In Silico Antidiabetic and Antimicrobial Evaluation of Constituents from Kickxia ramosissima (Nanorrhinum ramosissimum)
Cited by: 16
Author(s): Adnan Amin, Emmy Tuenter, Kenn Foubert, Jamhsed Iqbal, Paul Cos, Louis Maes, Vassiliki Exarchou, Sandra Apers, Luc Pieters
Software Mentions: 1
Published: over 7 years ago

10.3389/fphar.2016.00309

Current Therapeutic Cannabis Controversies and Clinical Trial Design Issues
Cited by: 79
Author(s): Ethan B. Russo
Software Mentions: 1
Published: about 8 years ago

10.3389/fphar.2018.01013

Bystander Effects of Hypoxia-Activated Prodrugs: Agent-Based Modeling Using Three Dimensional Cell Cultures
Cited by: 20
Author(s): Cho Rong Hong, Gib Bogle, Jingli Wang, Kashyap Patel, Frederik B. Pruijn, William R. Wilson, Kevin O. Hicks
Software Mentions: 1
Published: about 6 years ago

10.3389/fphys.2020.00205

Limitations to Starch Utilization in Barramundi (Lates calcarifer) as Revealed by NMR-Based Metabolomics
Cited by: 9
Author(s): Mariana Palma, Lauren H. Trenkner, João Rito, Ludgero C. Tavares, Emanuel Silva, Brett Glencross, John G. Jones, Nicholas M. Wade, Iván Viegas
Software Mentions: 1
Published: over 4 years ago

10.2478/intox-2013-0001

Modulation of rabbit muscle sarcoplasmic reticulum Ca2+-ATPase activity by novel quercetin derivatives
Cited by: 12
Author(s): D Blaškovič, Petronela Žižková, Filip Držík, Jana Viskupičová, Miroslav Veverka, Ľubica Horáková
Software Mentions: 1
Published: over 11 years ago

10.1007/s10867-014-9354-z

Experimental and theoretical studies on the molecular properties of ciprofloxacin, norfloxacin, pefloxacin, sparfloxacin, and gatifloxacin in determining bioavailability
Cited by: 31
Author(s): Ewa Kłosińska-Szmurło, Franciszek Pluciński, Monika Grudzień, Katarzyna Betlejewska-Kielak, Joanna M. Biernacka, Aleksander P. Mazurek
Software Mentions: 1
Published: over 10 years ago

10.1186/1758-2946-4-5

Blind trials of computer-assisted structure elucidation software
Cited by: 21
Author(s): Arvin Moser, Mikhail Elyashberg, Antony J. Williams, Kirill A. Blinov, Joseph C DiMartino
Software Mentions: 1
Published: almost 13 years ago

10.1186/1758-2946-4-11

Building an R&amp;D chemical registration system
Cited by: 23
Author(s): Elyette Martin, Aurélien Monge, Jacques-Antoine Duret, Federico Gualandi, Manuel C. Peitsch, Pavel Pospíšil
Software Mentions: 1
Published: over 12 years ago

10.1186/s13321-018-0316-5

JPlogP: an improved logP predictor trained using predicted data
Cited by: 33
Author(s): Jeffrey Plante, Stéphane Werner
Software Mentions: 1
Published: almost 6 years ago

10.3390/jcm10040596

Effects of Meal Fructose/Glucose Composition on Postprandial Glucose Appearance and Hepatic Glycogen Synthesis in Healthy Subjects
Cited by: 2
Author(s): Cristina Barosa, Rogério Ribeiro, Rita Andrade, João Filipe Raposo, John G. Jones
Software Mentions: 1
Published: almost 4 years ago

10.1080/14756366.2019.1681988

Optimisation of novel 4, 8-disubstituted dihydropyrimido[5,4-<i>b</i>][1,4]oxazine derivatives as potent GPR 119 agonists
Cited by: 4
Author(s): Fang Yuan, Shaokun Zhang, Min Li, Lijuan Xiong, Liangxing Tu, Sai‐Sai Xie, Yanhua Liu, Zunhua Yang, Ronghua Liu
Software Mentions: 1
Published: about 5 years ago

10.1093/jxb/erx354

Use of D-glucose–fenpiclonil conjugate as a potent and specific inhibitor of sucrose carriers
Cited by: 5
Author(s): Hongya Wu, Sophie Marhadour, Zhiwei Lei, Émilie Dugaro, Cécile Gaillard, Benoît Porcheron, Cécile Marivingt‐Mounir, Rémi Lemoine, Jean‐François Chollet, Jean‐Louis Bonnemain
Software Mentions: 1
Published: about 7 years ago

10.3390/polym12051025

Influence of Oxidation Degree on the Physicochemical Properties of Oxidized Inulin
Cited by: 10
Author(s): Franklin Afinjuomo, Paris Fouladian, Thomas G. Barclay, Yunmei Song, Nikolai Petrovsky, Sanjay Garg
Software Mentions: 1
Published: over 4 years ago

10.1186/2194-0517-2-11

Engineering of chitosan and collagen macromolecules using sebacic acid for clinical applications
Cited by: 23
Author(s): G. Sailakshmi, Tapas Mitra, A. Gnanamani
Software Mentions: 1
Published: over 11 years ago

10.1098/rsos.181296

Supersaturation with water explains the unusual adhesion of aggregate glue in the webs of the moth-specialist spider, <i>Cyrtarachne akirai</i>
Cited by: 15
Author(s): Cándido Díaz, Akio Tanikawa, Tadashi Miyashita, Gaurav Amarpuri, Dharamdeep Jain, Ali Dhinojwala, Todd A. Blackledge
Software Mentions: 1
Published: about 6 years ago

10.1038/srep38885

Systematic Assessment of Seven Solvent and Solid-Phase Extraction Methods for Metabolomics Analysis of Human Plasma by LC-MS
Cited by: 80
Author(s): Dmitri Sitnikov, Cian Monnin, Dajana Vuckovic
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-017-01272-8

NMR-based metabolomics for simultaneously evaluating multiple determinants of primary beef quality in Japanese Black cattle
Cited by: 60
Author(s): Yoshinori Kodani, Takuya Miyakawa, Takafumi Komatsu, Masaru Tanokura
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-04280-w

Engineering Biodegradable and Biocompatible Bio-ionic Liquid Conjugated Hydrogels with Tunable Conductivity and Mechanical Properties
Cited by: 98
Author(s): Iman Noshadi, Brian W. Walker, Roberto Portillo-Lara, Ehsan Shirzaei Sani, Nayara Cândida Gomes, Mohammad Reza Aziziyan, Nasim Annabi
Software Mentions: 1
Published: over 7 years ago