Data

Tools

Indexes

Applications

Experiments

Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: bioconductor: rhdf5

https://packages.ecosyste.ms/registries/bioconductor.org/packages/rhdf5

R Interface to HDF5
2 versions
Latest release: almost 2 years ago
63 dependent packages
1,833,991 downloads total

Enhanced Analysis
Educational Contributors: jgentry@jimmy.harvard.edu jennifer.wokaty@sph.cuny.edu mls40@cam.ac.uk jmacdon@med.umich.edu
Repository Activity:
Repository Owner: Mike Smith (user)
Data Management Coordinator at the European Molecular Biology Laboratory. @Bioconductor Core Team member. Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +80 Educational commit emails
    4 contributors with educational email addresses
  • +20 Academic repository owner
    Repository owned by academic institution
  • +4 Science terms in README
    2 scientific terms found in README
Penalties:
  • -15 No science keywords
    No scientific terms found in keywords/classifiers
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning rhdf5 7

10.1186/s12859-015-0683-0
diffHic: a Bioconductor package to detect differential genomic interactions in Hi-C data
Cited by: 172
Author(s): Aaron T. L. Lun, Gordon K. Smyth
Software Mentions: 14
Published: about 10 years ago
10.3389/fmicb.2020.545419
Species Dependence of SYTO 9 Staining of Bacteria
Cited by: 20
Author(s): Cushla McGoverin, Julia Robertson, Yaqub Jonmohamadi, Simon Swift, Frédérique Vanholsbeeck
Software Mentions: 10
Published: about 5 years ago
10.1186/s13072-021-00411-w
Sensitivity of cohesin–chromatin association to high-salt treatment corroborates non-topological mode of loop extrusion
Cited by: 4
Author(s): Arkadiy K. Golov, Anastasia V. Golova, А. В. Гаврилов, Sergey V. Razin
Software Mentions: 6
Published: about 4 years ago
10.1186/s12859-018-2238-7
GenoGAM 2.0: scalable and efficient implementation of genome-wide generalized additive models for gigabase-scale genomes
Cited by: 1
Author(s): Georg Stricker, Mathilde Galinier, Julien Gagneur
Software Mentions: 6
Published: about 7 years ago
10.1186/s13059-019-1856-3
NanoSatellite: accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION
Cited by: 47
Author(s): Arne De Roeck, Wouter De Coster, Liene Bossaerts, Rita Cacace, Tim De Pooter, Jasper Van Dongen, Svenn D’Hert, Peter De Rijk, Mojca Stražišar, Christine Van Broeckhoven, Kristel Sleegers
Software Mentions: 5
Published: almost 6 years ago
10.3390/microorganisms9050924
Rapid Detection of Escherichia coli Antibiotic Susceptibility Using Live/Dead Spectrometry for Lytic Agents
Cited by: 8
Author(s): Julia Robertson, Cushla McGoverin, Joni Renee White, Frédérique Vanholsbeeck, Simon Swift
Software Mentions: 2
Published: over 4 years ago
10.3390/genes9060274
Transitions from Single- to Multi-Locus Processes during Speciation with Gene Flow
Cited by: 26
Author(s): M. Schilling, Sean P. Mullen, Marcus R. Kronforst, Rebecca J. Safran, Patrik Nosil, Jeffrey L. Feder, Zachariah Gompert, Samuel M. Flaxman
Software Mentions: 2
Published: over 7 years ago