Projects: bioconductor: meshr
https://packages.ecosyste.ms/registries/bioconductor.org/packages/meshr
Tools for conducting enrichment analysis of MeSH
1 version
Latest release: over 2 years ago
1 dependent package
22,695 downloads total
Enhanced Analysis
Repository Activity:
Repository Owner:
RIKEN BiT (organization)
Laboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research Academic
Laboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+10
Science terms in README
5 scientific terms found in README -
+20
DOI references
2 DOI references found in README
Penalties:
-
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (100)
Papers Mentioning meshr 6
10.1186/s12859-015-0453-z
MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysisCited by: 41
Author(s): Koki Tsuyuzaki, Gota Morota, Manabu Ishii, Takeru Nakazato, Satoru Miyazaki, Itoshi Nikaido
Software Mentions: 13
Published: about 11 years ago
10.1186/s13007-017-0159-5
Medical Subject Heading (MeSH) annotations illuminate maize genetics and evolutionCited by: 7
Author(s): Timothy Beissinger, Gota Morota
Software Mentions: 3
Published: about 9 years ago
10.1534/g3.116.031096
MeSH-Informed Enrichment Analysis and MeSH-Guided Semantic Similarity Among Functional Terms and Gene Products in ChickenCited by: 10
Author(s): Gota Morota, Timothy Beissinger, Francisco Peñagaricano
Software Mentions: 3
Published: over 9 years ago
10.1038/s41598-018-29420-8
RNA-Seq reveals novel genes and pathways involved in bovine mammary involution during the dry period and under environmental heat stressCited by: 46
Author(s): Bethany Dado-Senn, Amy L. Skibiel, Thiago F. Fabris, Y. Zhang, Geoffrey E. Dahl, Francisco Peñagaricano, Jimena Laporta
Software Mentions: 2
Published: over 7 years ago
10.1111/age.12307
An application of Me <scp>SH</scp> enrichment analysis in livestockCited by: 27
Author(s): Gota Morota, Francisco Peñagaricano, Jessica L Petersen, Daniel C. Ciobanu, Koki Tsuyuzaki, Itoshi Nikaido
Software Mentions: 1
Published: almost 11 years ago
10.1111/age.13003
Discovering lethal alleles across the turkey genome using a transmission ratio distortion approachCited by: 12
Author(s): E. A. Abdalla, Samir Id‐Lahoucine, Ángela Cánovas, J. Casellas, F.S. Schenkel, Benjamin J. Wood, Christine F. Baes
Software Mentions: 1
Published: over 5 years ago