bioconductor: clusterProfiler | Projects

10.3389/fmolb.2021.728932

RhoA/ROCK-YAP/TAZ Axis Regulates the Fibrotic Activity in Dexamethasone-Treated Human Trabecular Meshwork Cells
Cited by: 15
Author(s): Zhicheng Liu, Shanshan Li, Xiuqing Qian, Lin Li, Haixia Zhang
Software Mentions: 2
Published: about 5 years ago

10.7554/eLife.63326

The mTORC1-mediated activation of ATF4 promotes protein and glutathione synthesis downstream of growth signals
Cited by: 80
Author(s): Margaret E. Torrence, Michael R. MacArthur, Aaron M. Hosios, Alexander J. Valvezan, John M. Asara, James R. Mitchell, Brendan D. Manning
Software Mentions: 2
Published: over 5 years ago

10.3389/fmolb.2020.562416

Phosphatase and Tensin Homolog Mutation in Immune Cell Infiltration and Clinicopathological Features of Low-Grade Gliomas
Cited by: 2
Author(s): Feng Peng, Zhenqing Li, Yuchen Li, Yuelin Zhang
Software Mentions: 2
Published: almost 6 years ago

10.3389/fimmu.2019.02956

Profile of Histone H3 Lysine 4 Trimethylation and the Effect of Lipopolysaccharide/Immune Complex-Activated Macrophages on Endotoxemia
Cited by: 12
Author(s): Vichaya Ruenjaiman, Patcharavadee Butta, Yu-Wei Leu, Monnat Pongpanich, Asada Leelahavanichkul, Patipark Kueanjinda, Tanapat Palaga
Software Mentions: 2
Published: over 6 years ago

10.3389/fmolb.2020.602328

Prognostic Biomarker TP53 Mutations for Immune Checkpoint Blockade Therapy and Its Association With Tumor Microenvironment of Lung Adenocarcinoma
Cited by: 25
Author(s): Xinqing Lin, Liqiang Wang, Xiaohong Xie, Yinyin Qin, Zhanhong Xie, Ming Ouyang, Chengzhi Zhou
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmolb.2021.598427

An Extracellular Matrix-Based Signature Associated With Immune Microenvironment Predicts the Prognosis and Therapeutic Responses of Patients With Oesophageal Squamous Cell Carcinoma
Cited by: 8
Author(s): Hongpan Zhang, Qi Shi, Zhihao Yang, Kaige Wang, Zhe Zhang, Zheng Huang, Xiaobin Cui, Feng Li
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2021.724451

Genome of Ganoderma Species Provides Insights Into the Evolution, Conifers Substrate Utilization, and Terpene Synthesis for Ganoderma tsugae
Cited by: 12
Author(s): Nan Jiang, Shuang Hu, Bing Peng, Zhenhao Li, Xiaohui Yuan, Shijun Xiao, Yongping Fu
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2020.606482

Effects of Peptide Thanatin on the Growth and Transcriptome of Penicillium digitatum
Cited by: 8
Author(s): Guo-Gang Feng, Xindan Li, Wenjun Wang, Lili Deng, Kaifang Zeng
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2020.00189

Loss of the Periplasmic Chaperone Skp and Mutations in the Efflux Pump AcrAB-TolC Play a Role in Acquired Resistance to Antimicrobial Peptides in Salmonella typhimurium
Cited by: 11
Author(s): Gal Kapach, Reut Nuri, Christiane Schmidt, Adi Danin, Shir Ferrera, Alon Savidor, Roman G. Gerlach, Yechiel Shai
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2021.688819

Genomic Analysis of Staphylococcus aureus Isolates Associated With Peracute Non-gangrenous or Gangrenous Mastitis and Comparison With Other Mastitis-Associated Staphylococcus aureus Isolates
Cited by: 7
Author(s): Silja Åvall-Jääskeläinen, Joanna Koort, Heli Simojoki, Suvi Taponen
Software Mentions: 2
Published: about 5 years ago

10.3389/fmed.2021.702638

Molecular Characteristics, Clinical Implication, and Cancer Immunity Interactions of Pyroptosis-Related Genes in Breast Cancer
Cited by: 35
Author(s): Dandan Xu, Zhipeng Ji, Lei Qiang
Software Mentions: 2
Published: about 5 years ago

10.3390/ijms20081958

The Effects of Epigallocatechin Gallate (EGCG) on Pulmonary Fibroblasts of Idiopathic Pulmonary Fibrosis (IPF)—A Next-Generation Sequencing and Bioinformatic Approach
Cited by: 25
Author(s): Ming‐Ju Tsai, Wei‐An Chang, Ssu‐Hui Liao, Kai‐Chih Chang, Chau‐Chyun Sheu, Po‐Lin Kuo
Software Mentions: 2
Published: over 7 years ago

10.3390/nu10081047

Coffee Consumption and Whole-Blood Gene Expression in the Norwegian Women and Cancer Post-Genome Cohort
Cited by: 10
Author(s): Runa Borgund Barnung, Therese Haugdahl Nøst, Stine Marie Ulven, Guri Skeie, Anja Olsen
Software Mentions: 2
Published: about 8 years ago

10.3389/fmed.2021.649326

Three Immune-Related Prognostic mRNAs as Therapeutic Targets for Pancreatic Cancer
Cited by: 10
Author(s): Cangang Zhang, Yueji Zou, Yanan Zhu, Yi Liu, Hui Feng, F. Niu, Pengcheng He, Haibo Li
Software Mentions: 2
Published: over 5 years ago

10.1038/s41392-020-00382-6

Molecular characteristics of primary pulmonary lymphoepithelioma-like carcinoma based on integrated genomic analyses
Cited by: 18
Author(s): Bojiang Chen, Yu Zhang, Shenyu Dai, Ping Zhou, Wenxin Luo, Zhoufeng Wang, Xuping Chen, Cheng Peng, Guoya Zheng, Jing Ren, Xiaodong Yang, Weimin Li
Software Mentions: 2
Published: over 5 years ago

10.1186/s13287-020-01690-y

Comparative separation methods and biological characteristics of human placental and umbilical cord mesenchymal stem cells in serum-free culture conditions
Cited by: 21
Author(s): Yingying Xiao, Feng Chen, Fenghua Li, Qing Peng, Li Yang, Li Shao, Jiang Du, Yi Gao, Yifeng Wang
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2021.667136

Transcriptomic Analysis of the Effect of GAT-2 Deficiency on Differentiation of Mice Naïve T Cells Into Th1 Cells In Vitro
Cited by: 5
Author(s): Xueyan Ding, Yajie Chang, Siquan Wang, Dong Yan, Jiakui Yao, Guoqiang Zhu
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-99344-3

Transcriptomic analysis revealed increased expression of genes involved in keratinization in the tears of COVID-19 patients
Cited by: 8
Author(s): Leonardo Mastropasqua, Lisa Toto, Luigi Chiricosta, Francesca Diomede, Agnese Gugliandolo, Serena Silvestro, Guya Diletta Marconi, Bruna Sinjari, Jacopo Vecchiet, Francesco Cipollone, Damiano D’Ardes, Antonio Auricchio, Manuela Lanzini, Sergio Caputi, Rossella D’Aloisio, Emanuela Mazzon, Oriana Trubiani
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-021-98948-z

Tanshinone IIA affects the malignant growth of Cholangiocarcinoma cells by inhibiting the PI3K-Akt-mTOR pathway
Cited by: 5
Author(s): Huayuan Liu, Caiyun Liu, Mengya Wang, Dongxu Sun, Pengcheng Zhu, Ping Zhang, Xueying Tan, Guangjun Shi
Software Mentions: 2
Published: about 5 years ago

10.1155/2018/8238496

Genome-Wide DNA Methylation Analysis during Osteogenic Differentiation of Human Bone Marrow Mesenchymal Stem Cells
Cited by: 14
Author(s): Yangyang Cao, Haoqing Yang, Luyuan Jin, Juan Du, Zhipeng Fan
Software Mentions: 2
Published: about 8 years ago

10.1155/2021/7182914

Integrative Network Analysis Revealed Genetic Impact of Pyruvate Kinase L/R on Hepatocyte Proliferation and Graft Survival after Liver Transplantation
Cited by: 2
Author(s): Zhengtao Liu, Junsheng Zhao, Qianqian Wang, Hai Zhu, Junjie Qian, Shuai Wang, Shuping Que, Feng Zhang, Shengyong Yin, Lin Zhou, Lei Geng, Shusen Zheng
Software Mentions: 2
Published: about 5 years ago

10.7150/thno.44782

Therapeutic potential of HERS spheroids in tooth regeneration
Cited by: 10
Author(s): Yufeng Duan, Xuebing Li, Sicheng Zhang, Shikai Wang, Tao Wang, Hong Chen, Yiqin Yang, Sixun Jia, Guoqing Chen, Weidong Tian
Software Mentions: 2
Published: almost 7 years ago

10.3389/fgene.2018.00293

Zearalenone Exposure Enhanced the Expression of Tumorigenesis Genes in Donkey Granulosa Cells via the PTEN/PI3K/AKT Signaling Pathway
Cited by: 15
Author(s): Guoliang Zhang, Junlin Song, Chuanliang Ji, Yulong Feng, Jie Yu, C. M. Nyachoti, Gongshe Yang
Software Mentions: 2
Published: about 8 years ago

10.3389/fimmu.2020.01709

Toxoplasma gondii Dense Granule Proteins 7, 14, and 15 Are Involved in Modification and Control of the Immune Response Mediated via NF-κB Pathway
Cited by: 21
Author(s): Fumie Ihara, Ragab M. Fereig, Yuu Himori, Kyohko Kameyama, Kosuke Umeda, Sadao Tanaka, Rina Ikeda, Masahiro Yamamoto, Yoshifumi Nishikawa
Software Mentions: 2
Published: about 6 years ago

10.3389/fimmu.2021.683330

Single-Cell Profiling Reveals Transcriptional Signatures and Cell-Cell Crosstalk in Anti-PLA2R Positive Idiopathic Membranous Nephropathy Patients
Cited by: 17
Author(s): Jie Xu, Cong Shen, Wei Lin, Ting Meng, Joshua D. Ooi, Peter J. Eggenhuizen, Rong Tang, Gong Xiao, Peng Jin, Xiang Ding, Yangshuo Tang, Weilin Peng, Wannian Nie, Xiang Ao, Xiangcheng Xiao, Yong Zhong, Qiaoling Zhou
Software Mentions: 2
Published: over 5 years ago

10.1093/g3journal/jkab077

Highly effective proximate labeling in Drosophila
Cited by: 21
Author(s): Bo Zhang, Yuanbing Zhang, Ji‐Long Liu
Software Mentions: 2
Published: over 5 years ago

10.1534/g3.119.400785

De Novo Transcriptome Sequencing of Serangium japonicum (Coleoptera: Coccinellidae) and Application of Two Assembled Unigenes
Cited by: 0
Author(s): Ya Hui Hu, Yong Liu, Wei Lin, Hao Tao Chen
Software Mentions: 2
Published: almost 7 years ago

10.1534/g3.116.029504

Whole-Genome Sequencing Reveals Genetic Variation in the Asian House Rat
Cited by: 8
Author(s): Huajing Teng, Yaohua Zhang, Cheng-Min Shi, Fengbiao Mao, Lingling Hou, Hongling Guo, Zhen Sun, Jianxu Zhang
Software Mentions: 2
Published: over 10 years ago

10.7150/thno.57701

TGF-β loaded exosome enhances ischemic wound healing in vitro and in vivo
Cited by: 46
Author(s): Ao Shi, Jialun Li, Xiaozhen Guo, Michael S. Sabbah, Soulmaz Boroumand, Tony Chieh-Ting Huang, Chunfeng Zhao, André Terzic, Atta Behfar, Steven L. Moran
Software Mentions: 2
Published: almost 6 years ago

10.3389/fvets.2021.688684

Construction and Analysis of Coexpression Network to Understand Biological Responses in Chickens Infected by Eimeria tenella
Cited by: 3
Author(s): Baohong Liu, Xiu-Wen Ma, Jianping Cai
Software Mentions: 2
Published: about 5 years ago

10.3389/fsurg.2021.663377

Long Non-coding RNAs in Traumatic Brain Injury Accelerated Fracture Healing
Cited by: 2
Author(s): Guoning Guo, Yajun Gou, Xingyu Jiang, Shuhong Wang, Ruilie Wang, Changqiang Liang, Guang Yang, Tinggang Wang, Anyong Yu, Guofu Zhu
Software Mentions: 2
Published: over 5 years ago

10.1155/2020/8951907

Baicalin Represses C/EBPβ via Its Antioxidative Effect in Parkinson’s Disease
Cited by: 24
Author(s): Kecheng Lei, Yijue Shen, Yijing He, Liwen Zhang, Jingxing Zhang, Weifang Tong, Yawei Xu, Lingjing Jin
Software Mentions: 2
Published: over 6 years ago

10.3389/fpsyt.2020.00256

Integrated Analysis of Summary Statistics to Identify Pleiotropic Genes and Pathways for the Comorbidity of Schizophrenia and Cardiometabolic Disease
Cited by: 22
Author(s): Hao Líu, Yang Sun, Xinxin Zhang, Shiyang Li, Dong Hu, Lei Xiao, Yanghui Chen, Lin He, Dao Wen Wang
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2021.700031

Discovery of Novel Biomarkers for Diagnosing and Predicting the Progression of Multiple Sclerosis Using TMT-Based Quantitative Proteomics
Cited by: 10
Author(s): Yijun Shi, Yaowei Ding, Guoge Li, Limin Wang, Rasha Alsamani Osman, Jialu Sun, Lingye Qian, Guanghui Zheng, Guojun Zhang
Software Mentions: 2
Published: about 5 years ago

10.1128/mSystems.00416-20

Transcriptional Rewiring, Adaptation, and the Role of Gene Duplication in the Metabolism of Ethanol of Saccharomyces cerevisiae
Cited by: 4
Author(s): Beatriz Sabater-Muñoz, Florian Mattenberger, Mario A. Fares, Christina Toft
Software Mentions: 2
Published: about 6 years ago

10.1128/mSystems.00175-21

A MicroRNA Gene Panel Predicts the Vaginal Microbiota Composition
Cited by: 4
Author(s): Liqin Cheng, Dominika Kaźmierczak, Johanna Norenhag, Marica Hamsten, Emma Fransson, Ina Schuppe-Koistinen, Matts Olovsson, Lars Engstrand, Per Hydbring, Juan Du
Software Mentions: 2
Published: over 5 years ago

10.1128/mSystems.00397-21

The DNA Sensor IFIX Drives Proteome Alterations To Mobilize Nuclear and Cytoplasmic Antiviral Responses, with Its Acetylation Acting as a Localization Toggle
Cited by: 8
Author(s): Timothy R. Howard, Marni S. Crow, Todd M. Greco, Krystal K. Lum, Tuo Li, Ileana M. Cristea
Software Mentions: 2
Published: over 5 years ago

10.7150/ijbs.42962

Phosphoinositide specific phospholipase Cγ1 inhibition-driven autophagy caused cell death in human lung adenocarcinoma A549 cells in vivo and in vitro
Cited by: 8
Author(s): Xiaohong Lü, Haijing Fu, Rui Chen, Yue Wang, Yan-yan Zhan, Gang Song, Tianhui Hu, Chun Xia, Xuemei Tian, Bing Zhang
Software Mentions: 2
Published: almost 7 years ago

10.3389/fpls.2021.690841

Integrating Genome-Wide Association Analysis With Transcriptome Sequencing to Identify Candidate Genes Related to Blooming Time in Prunus mume
Cited by: 7
Author(s): Man Zhang, Yang Qiu, Xianjun Yuan, Xiao-lan Yan, Jia Wang, Tangren Cheng, Qixiang Zhang
Software Mentions: 2
Published: about 5 years ago

10.3389/fphar.2020.00284

An Integrated Pharmacology-Based Analysis for Antidepressant Mechanism of Chinese Herbal Formula Xiao-Yao-San
Cited by: 35
Author(s): Naijun Yuan, Lian Gong, Kairui Tang, Liangliang He, Wenzhi Hao, Xiaojuan Li, Qingyu Ma, Jiaxu Chen
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2021.694801

Multi-Omics Analysis Showed the Clinical Value of Gene Signatures of C1QC+ and SPP1+ TAMs in Cervical Cancer
Cited by: 16
Author(s): Li Xiong, Qinghua Zhang, Gang Chen, Danfeng Luo
Software Mentions: 2
Published: over 5 years ago

10.3389/fphar.2021.627126

Blood microRNA Signatures Serve as Potential Diagnostic Biomarkers for Hepatic Sinusoidal Obstruction Syndrome Caused by Gynura japonica Containing Pyrrolizidine Alkaloids
Cited by: 3
Author(s): Xunjiang Wang, Wei Zhang, Yongfeng Yang, Yiran Chen, Yuzheng Zhuge, Aizhen Xiong, Li Yang, Zhengtao Wang
Software Mentions: 2
Published: over 5 years ago

10.1186/s13046-019-1318-5

A positive feedback between IDO1 metabolite and COL12A1 via MAPK pathway to promote gastric cancer metastasis
Cited by: 75
Author(s): Zhen Xiang, Jun Li, Shuzheng Song, Jiexuan Wang, Wei Cai, Wenjun Hu, Jun Ji, Zhenggang Zhu, Lu Zang, Ranlin Yan, Yingyan Yu
Software Mentions: 2
Published: about 7 years ago

10.3389/fphar.2020.559046

Notoginsenoside R1 Protects Against the Acrylamide-Induced Neurotoxicity via Upregulating Trx-1-Mediated ITGAV Expression: Involvement of Autophagy
Cited by: 3
Author(s): Wenjun Wang, Lu Huang, Elizabeth Rosalind Thomas, Yingying Hu, Fancai Zeng, Xiang Li
Software Mentions: 2
Published: about 6 years ago

10.3389/fphar.2020.00485

Kunxian Capsule for Rheumatoid Arthritis: Inhibition of Inflammatory Network and Reducing Adverse Reactions Through Drug Matching
Cited by: 20
Author(s): Yujun Tang, Yi Zeng, Lin Li, Zhihua Xie, Chengping Wen, Lin Huang
Software Mentions: 2
Published: over 6 years ago

10.1186/s13046-021-02066-7

The non-canonical mechanism of ER stress-mediated progression of prostate cancer
Cited by: 14
Author(s): Artem N. Pachikov, Ryan R. Gough, Caroline E. Christy, Mary E. Morris, Carol A. Casey, Chad A. LaGrange, Ganapati Bhat, Anatoly V. Kubyshkin, И. И. Фомочкина, Evgeniya Y. Zyablitskaya, Tatiana P. Makalish, Elena Petrovna Golubinskaya, Kateryna A. Davydenko, Sergey N. Eremenko, Jean-Jack M. Riethoven, Amith S. Maroli, Thomas Payne, Robert Powers, Alexander Y. Lushnikov, Amanda J. Macke, Armen Petrosyan
Software Mentions: 2
Published: about 5 years ago

10.3389/fphar.2021.707930

An m6A-Related Prognostic Biomarker Associated With the Hepatocellular Carcinoma Immune Microenvironment
Cited by: 9
Author(s): Yingxi Du, Yarui Ma, Qing Zhu, Tongzheng Liu, Yuchen Jiao, Peng Yuan, Xiaobing Wang
Software Mentions: 2
Published: over 5 years ago

10.1002/jev2.12063

Proteomic profile of melanoma cell‐derived small extracellular vesicles in patients’ plasma: a potential correlate of melanoma progression
Cited by: 35
Author(s): Monika Pietrowska, Aneta Zebrowska, Marta Gawin, Łukasz Marczak, Prateek Sharma, Sujan Kumar Mondal, Justyna Mika, Joanna Polańska, Soldano Ferrone, John M. Kirkwood, Piotr Widłak, Theresa L. Whiteside
Software Mentions: 2
Published: over 5 years ago

10.3389/fphar.2021.723066

Glycogen Metabolism Predicts the Efficacy of Immunotherapy for Urothelial Carcinoma
Cited by: 1
Author(s): Yueming Zhang, Xuechun Li, Rui Zhou, Anqi Lin, Manming Cao, Qing Lyu, Peng Luo, Jian Zhang
Software Mentions: 2
Published: about 5 years ago

10.1155/2016/8346198

Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types
Cited by: 13
Author(s): André Fonseca, Vandeclécio L. da Silva, Maira Christina Marques Fonseca, Isabella Tanus Job e Meira, Thayná E. da Silva, José Eduardo Kroll, André M. Ribeiro-dos-Santos, Cléber R. Freitas, Raimundo Furtado, Jorge E. de Souza, Beatriz Stransky, Sandro J. de Souza
Software Mentions: 2
Published: almost 11 years ago

10.1155/2019/1429316

Transcriptomic Evidence of Adaptive Evolution of the Epiphytic Fern Asplenium nidus
Cited by: 6
Author(s): Jiao Zhang, Li Liu, Jiang-Ping Shu, Dongmei Jin, Hui Shen, Hongfeng Chen, Rui Zhang, Yue‐Hong Yan
Software Mentions: 2
Published: almost 7 years ago

10.1155/2020/5925126

Metabonomic-Transcriptome Integration Analysis on Osteoarthritis and Rheumatoid Arthritis
Cited by: 6
Author(s): Ningyang Gao, Ding Li, Jian Pang, Yuxin Zheng, Yuelong Cao, Hongsheng Zhan, Yue Shi
Software Mentions: 2
Published: almost 7 years ago

10.7150/ijms.47555

Research on the potential mechanism of Chuanxiong Rhizoma on treating Diabetic Nephropathy based on network pharmacology
Cited by: 7
Author(s): Shanshan Hu, Siteng Chen, Zhilei Li, Yuhang Wang, Yong Wang
Software Mentions: 2
Published: almost 7 years ago

10.3389/fphar.2021.651305

β-Caryophyllene Ameliorates MSU-Induced Gouty Arthritis and Inflammation Through Inhibiting NLRP3 and NF-κB Signal Pathway: In Silico and In Vivo
Cited by: 10
Author(s): Wan-Yang Li, Fan Yang, Jihua Chen, Guofeng Ren
Software Mentions: 2
Published: over 5 years ago

10.7150/ijms.35984

Protein chip and bioinformatic analyses of differentially expressed proteins involved in the effect of hydrogen-rich water on myocardial ischemia-reperfusion injury
Cited by: 6
Author(s): Liangtong Li, Tongtong Liu, Xiangzi Li, Xuanchen Liu, Li Liu, Shaochun Li, Zhilin Li, Yujuan Zhou, Fulin Liu
Software Mentions: 2
Published: almost 8 years ago

10.3389/fphar.2018.01570

High Throughput mRNA Sequencing Reveals Potential Therapeutic Targets of Tao-Hong-Si-Wu Decoction in Experimental Middle Cerebral Artery Occlusion
Cited by: 12
Author(s): Xianchun Duan, Lei Han, Daiyin Peng, Weidong Chen, Can Peng, Ling Xiao, Qiuyu Bao
Software Mentions: 2
Published: over 7 years ago

10.1186/s13045-021-01125-y

Metabolic landscapes in sarcomas
Cited by: 5
Author(s): Richard Miallot, Franck Galland, Virginie Millet, Jean‐Yves Blay, Philippe Naquet
Software Mentions: 2
Published: about 5 years ago

10.3389/fphar.2020.00387

NCAPG Is a Promising Therapeutic Target Across Different Tumor Types
Cited by: 30
Author(s): Cuicui Xiao, Jiao Gong, Yusheng Jie, Jing Cao, Zhongcheng Chen, Rong Li, Yutian Chong, Bo Hu, Qi Zhang
Software Mentions: 2
Published: over 6 years ago

10.3389/fphar.2019.00408

Systems Biology Analysis of the Effect and Mechanism of Qi-Jing-Sheng-Bai Granule on Leucopenia in Mice
Cited by: 12
Author(s): Sai Tian, Pengli Huang, Yu Gu, Jian Yang, Ran Wu, Jing Zhao, Aijun Liu, Weidong Zhang
Software Mentions: 2
Published: over 7 years ago

10.3389/fphar.2021.632225

Knockout of Formyl Peptide Receptor-1 Attenuates Cigarette Smoke–Induced Airway Inflammation in Mice
Cited by: 6
Author(s): Lijuan Gao, Ni Zeng, Zhicheng Yuan, Tao Wang, Lei Chen, Deqing Yang, Dan Xu, Chun Wan, Fuqiang Wen, Yongchun Shen
Software Mentions: 2
Published: over 5 years ago

10.1155/2021/6679316

Ursolic Acid Regulates Intestinal Microbiota and Inflammatory Cell Infiltration to Prevent Ulcerative Colitis
Cited by: 14
Author(s): Qinsong Sheng, Fēi Li, Guanping Chen, Jiacheng Li, Jing Li, Yifan Wang, Yingyan Lu, Qun Li, Mingqian Li, Kequn Chai
Software Mentions: 2
Published: over 5 years ago

10.3389/fphar.2021.709548

YTHDF2 is a Potential Biomarker and Associated with Immune Infiltration in Kidney Renal Clear Cell Carcinoma
Cited by: 16
Author(s): Ganglin Su, Tianshu Liu, Xiaohong Han, Hao Sun, Wen’an Che, Kun Hu, Junwen Xiao, Yanfeng Li, Yuchen Liu, Wujiao Li, Hongbing Mei
Software Mentions: 2
Published: about 5 years ago

10.3389/fphar.2021.710692

Protective Property of Scutellarin Against Liver Injury Induced by Carbon Tetrachloride in Mice
Cited by: 8
Author(s): Zhimin Miao, Yongrong Lai, Yingying Zhao, Lingmin Chen, Jianeng Zhou, Chunyan Li, Yan Wang
Software Mentions: 2
Published: about 5 years ago

10.3389/fphar.2021.697643

Melatonin Alleviates Renal Injury in Mouse Model of Sepsis
Cited by: 6
Author(s): Liyang Chen, Ze‐Guang Han, Z.B. Shi, Chao Liu, Qiulun Lu
Software Mentions: 2
Published: about 5 years ago

10.3389/fphar.2020.512877

A Novel Network Pharmacology Strategy to Decode Mechanism of Lang Chuang Wan in Treating Systemic Lupus Erythematosus
Cited by: 19
Author(s): Yao Gao, Kexin Wang, Peng Wang, Li Xiao, Jingjing Chen, Boya Zhou, Jun-Sheng Tian, Daogang Guan, Xuemei Qin, Aiping Lü
Software Mentions: 2
Published: about 6 years ago

10.3389/fpls.2021.639104

Comparative Phenotypic and Transcriptomic Analysis Reveals Key Responses of Upland Cotton to Salinity Stress During Postgermination
Cited by: 8
Author(s): Jingxia Zhang, Pei Zhang, Xuehan Huo, Yinghui Gao, Yu Chen, Zhangqiang Song, Furong Wang, Jun Zhang
Software Mentions: 1
Published: over 5 years ago

10.1155/2021/5556212

Network Pharmacology/Metabolomics-Based Validation of AMPK and PI3K/AKT Signaling Pathway as a Central Role of Shengqi Fuzheng Injection Regulation of Mitochondrial Dysfunction in Cancer-Related Fatigue
Cited by: 11
Author(s): Wei Guo, Shan Liu, Xiongwei Zheng, Zhiwei Xiao, Hanrui Chen, Lingling Sun, Chi Zhang, Zhijie Wang, Lizhu Lin
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2021.643971

Cocktail Therapy of Fosthiazate and Cupric-Ammoniun Complex for Citrus Huanglongbing
Cited by: 8
Author(s): Jingwei Duan, Xue Li, Junzhe Zhang, Baoping Cheng, Shuhan Liu, Hongmei Li, Quan Zhou, Wenli Chen
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2021.688746

Poria cum Radix Pini Rescues Barium Chloride-Induced Arrhythmia by Regulating the cGMP-PKG Signalling Pathway Involving ADORA1 in Zebrafish
Cited by: 2
Author(s): Ning-Juan Yang, Yanru Liu, Zhishu Tang, Jin‐Ao Duan, Yongmei Yan, Zhong-Xing Song, Ming-Geng Wang, Yuru Zhang, Bai-Jin Chang, Mingwen Zhao, Yan-Ting Zhao
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2021.713984

Comparative Transcriptomics and Metabolomics Reveal an Intricate Priming Mechanism Involved in PGPR-Mediated Salt Tolerance in Tomato
Cited by: 39
Author(s): Ιfigeneia Mellidou, Aggeliki Ainalidou, Αναστασία Παπαδοπούλου, Kleopatra Leontidou, Savvas Genitsaris, Evangelos Karagiannis, Bram Van de Poel, Katerina Karamanoli
Software Mentions: 1
Published: about 5 years ago

10.1155/2021/6439975

Development and Validation of a TNF Family-Based Signature for Predicting Prognosis, Tumor Immune Characteristics, and Immunotherapy Response in Colorectal Cancer Patients
Cited by: 10
Author(s): Xiao Zheng, Kechao Nie, Tong Han, Lin Cheng, Zheyu Zhang, Weijun Peng, Dazun Shi
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.679241

The abaI/abaR Quorum Sensing System Effects on Pathogenicity in Acinetobacter baumannii
Cited by: 11
Author(s): Xiaoyu Sun, Zhaohui Ni, Jie Tang, Yue Ding, Xinlei Wang, Fan Li
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2021.678661

Chronic Obstructive Pulmonary Disease Patients Have Increased Levels of Plasma Inflammatory Mediators Reported Upregulated in Severe COVID-19
Cited by: 6
Author(s): Nathalie Acevedo, Jose Miguel Escamilla-Gil, Héctor Espinoza, Ronald Regino, Jonathan Ramírez, Lucila Florez de Arco, Rodolfo Dennis, Carlos A. Torres‐Duque, Luis Caraballo
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2021.614773

Comprehensive Transcriptomic Analysis Reveals the Role of the Immune Checkpoint HLA-G Molecule in Cancers
Cited by: 8
Author(s): Huihui Xu, Jing Gan, Dan-Ping Xu, Lü Li, Wei‐Hua Yan
Software Mentions: 1
Published: over 5 years ago

10.1186/s13287-020-02114-7

Donor heart preservation with hypoxic-conditioned medium-derived from bone marrow mesenchymal stem cells improves cardiac function in a heart transplantation model
Cited by: 10
Author(s): Pengyu Zhou, Hao Líu, Ximao Liu, Langtao Xiao, Zezhou Xiao, Peng Zhu, Yujie Zhu, Jun Lu, Shaoyi Zheng
Software Mentions: 1
Published: over 5 years ago

10.7150/ijbs.39779

Therapeutic Targeting of CDK7 Suppresses Tumor Progression in Intrahepatic Cholangiocarcinoma
Cited by: 11
Author(s): Huadong Chen, Chen‐Song Huang, Qiong‐Cong Xu, Fuxi Li, Xi‐Tai Huang, Jie‐Qin Wang, Shijin Li, Wei Zhao, Xiaoyu Yin
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13046-018-0970-5

Dysregulation of miR-6868-5p/FOXM1 circuit contributes to colorectal cancer angiogenesis
Cited by: 19
Author(s): Ye Wang, WU Mei-juan, Zengjie Lei, Mengxi Huang, Zhiping Li, Liya Wang, Qijun Cao, Dong Cho Han, Yue Chang, Yanyan Chen, Fei Liu, Lijun Xue, Xiaobei Mao, Jiao Geng, Yanan Chen, Tingting Dai, Lili Ren, Qin Wang, Hong-Ju Yu, Cheng Chen, Xiaoyuan Chen
Software Mentions: 1
Published: almost 8 years ago

10.3389/fimmu.2021.708747

The Spleen as a Target to Characterize Immunomodulatory Effects of Down-Stream Processed Cyberlindnera jadinii Yeasts in Atlantic Salmon Exposed to a Dietary Soybean Meal Challenge
Cited by: 8
Author(s): Byron Morales‐Lange, Jeleel Opeyemi Agboola, Jon Øvrum Hansen, Leidy Lagos, Ove Øyås, Luís Mercado, Liv Torunn Mydland, Margareth Øverland
Software Mentions: 1
Published: about 5 years ago

10.1186/s13287-021-02317-6

Curcumin-primed human BMSC-derived extracellular vesicles reverse IL-1β-induced catabolic responses of OA chondrocytes by upregulating miR-126-3p
Cited by: 42
Author(s): Shushan Li, Sabine Stöckl, Christoph Lukas, Marietta Herrmann, Christoph Brochhausen, Matthias König, Brian Johnstone, Susanne Grässel
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.669893

Premature Senescence and Increased Oxidative Stress in the Thymus of Down Syndrome Patients
Cited by: 14
Author(s): Genni Enza Marcovecchio, Francesca Ferrua, Elena Fontana, Stefano Beretta, Marco Genua, Ileana Bortolomai, Anastasia Conti, Davide Montin, Maria Teresa Cascarano, Sonia Bergante, Veronica D’Oria, Alessandro Giamberti, Donato Amodio, Caterina Cancrini, Adriano Carotti, Raffaella Di Micco, Ivan Merelli, Marita Bosticardo, Anna Villa
Software Mentions: 1
Published: over 5 years ago

10.1038/s41388-020-01512-8

LncRNA SNHG11 facilitates tumor metastasis by interacting with and stabilizing HIF-1α
Cited by: 55
Author(s): Linguo Xu, Lin Huan, Tong Guo, Yangjun Wu, Yanfang Liu, Qifeng Wang, Shenglin Huang, Ye Xu, Linhui Liang, Xianghuo He
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2018.01311

Genome-Wide Association Mapping of Starch Pasting Properties in Maize Using Single-Locus and Multi-Locus Models
Cited by: 58
Author(s): Yongsheng Xu, Tiantian Yang, Yao Zhou, Yin Su, Pengcheng Li, Jun Liu, Shaohang Xu, Zefeng Yang, Chenwu Xu
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2020.00341

Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus
Cited by: 16
Author(s): Salvatore Casarrubia, Elena Martino, Stefania Daghino, Annegret Kohler, Emmanuelle Morin, Hassine‐Radhouane Khouja, Claude Murat, Kerrie Barry, Erika Lindquist, Francis Martin, Silvia Perotto
Software Mentions: 1
Published: over 6 years ago

10.1002/jev2.12054

Highly efficient magnetic labelling allows MRI tracking of the homing of stem cell‐derived extracellular vesicles following systemic delivery
Cited by: 32
Author(s): Han Zheng, Senquan Liu, Yigang Pei, Zheng Ding, Yuguo Li, Xinge Wang, Daqian Zhan, Shuli Xia, Tom A.P. Driedonks, Kenneth W. Witwer, Robert G. Weiss, Peter C.M. van Zijl, Jeff W.M. Bulte, Linzhao Cheng, Guanshu Liu
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13287-020-01594-x

Intra-articular delivery of extracellular vesicles secreted by chondrogenic progenitor cells from MRL/MpJ superhealer mice enhances articular cartilage repair in a mouse injury model
Cited by: 45
Author(s): Rikang Wang, Wei Jiang, Lang Zhang, Sai‐Sai Xie, Shuai Zhang, Shenfang Yuan, Yi Jin, Guangqian Zhou
Software Mentions: 1
Published: over 6 years ago

10.3389/fonc.2021.680873

Significance of DMBT1 in Papillary Thyroid Carcinoma Concurrent With Hashimoto’s Thyroiditis
Cited by: 2
Author(s): Xiao‐Xiong Gan, Ya-Yi Li, Sijin Li, Shi-Sen Mo, Jianhua Feng, Fei Shen, Wei Cai, Ye-Qian Lai, Bo Xu
Software Mentions: 1
Published: about 5 years ago

10.3389/fphar.2020.532041

Ginsenoside Re Treatment Attenuates Myocardial Hypoxia/Reoxygenation Injury by Inhibiting HIF-1α Ubiquitination
Cited by: 11
Author(s): Huiyuan Sun, Shukuan Ling, Di Zhao, Jianwei Li, Yang Li, Hua Qu, Ronghui Du, Ying Zhang, Feng Xu, Yuheng Li, Caizhi Liu, Guangming Zhong, Shuai Liang, Zizhong Liu, Xingcheng Gao, Xiaoyan Jin, Yingxian Li, Donglei Shi
Software Mentions: 1
Published: about 6 years ago

10.3389/fonc.2021.697308

Identification of Key Genes Mutations Associated With the Radiosensitivity by Whole Exome Sequencing in Pancreatic Cancer
Cited by: 3
Author(s): Bin Hu, Xiumei Ma, Rongfu Huang, Zheng Wu, Jun Lü, Yuntao Guo, Jianmin Tang, Chunhui Ma, Jun Ma, Lei Zhang, Yongrui Bai
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.25165

Notch/Her12 signalling modulates, motile/immotile cilia ratio downstream of Foxj1a in zebrafish left-right organizer
Cited by: 23
Author(s): Bárbara Tavares, Raquel Jacinto, Pedro Sampaio, Sara Pestana, Andreia Pinto, Andreia Vaz, Mónica Roxo-Rosa, Rui Gardner, Telma Lopes, Britta Schilling, Ian Henry, Leonor Saúde, Susana S. Lopes
Software Mentions: 1
Published: about 9 years ago

10.3389/fphar.2021.720619

The Downregulation of eIF3a Contributes to Vemurafenib Resistance in Melanoma by Activating ERK via PPP2R1B
Cited by: 4
Author(s): Shilong Jiang, Zhi-Bin Wang, Tao Zhu, Ting Jiang, Jiang-Feng Fei, Chong Liu, Chao Luo, Yan Cheng, Zhao‐Qian Liu
Software Mentions: 1
Published: about 5 years ago

10.3389/fphar.2021.594833

Computational and In Vitro Analysis of Plumbagin’s Molecular Mechanism for the Treatment of Hepatocellular Carcinoma
Cited by: 6
Author(s): Yanfei Wei, Yu‐Hsuan Lin, Wanjun Chen, Shasha Li, Lei Jin, Delun Huang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41398-020-00984-2

An epigenome-wide association study of early-onset major depression in monozygotic twins
Cited by: 28
Author(s): Roxann Roberson‐Nay, Dana M. Lapato, Aaron R. Wolen, Eva Lancaster, Bradley T. Webb, Bradley Verhulst, John M. Hettema, Timothy P. York
Software Mentions: 1
Published: about 6 years ago

10.1155/2019/5894926

Identification and Validation of Core Genes Involved in the Development of Papillary Thyroid Carcinoma via Bioinformatics Analysis
Cited by: 6
Author(s): Xiaoyan Li, Jing He, Mingxia Zhou, Yun Cao, Yonglong Jin, Qiang Zou
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.52695

Tgfβ signaling is critical for maintenance of the tendon cell fate
Cited by: 55
Author(s): Guak Kim Tan, Brian A. Pryce, Anna Stabio, John V. Brigande, Chaojie Wang, Zheng Xia, Sara F. Tufa, Douglas R. Keene, Ronen Schweitzer
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.570903

Transcriptomic Profiling of Mouse Brain During Acute and Chronic Infections by Toxoplasma gondii Oocysts
Cited by: 8
Author(s): Rui-Si Hu, Jun-Jun He, Hany M. Elsheikha, Yang Zou, Muhammad Ehsan, Qiao-Ni Ma, Xingquan Zhu, Wei Cong
Software Mentions: 1
Published: almost 6 years ago

10.3389/fphar.2021.618844

How Aconiti Radix Cocta can Treat Gouty Arthritis Based on Systematic Pharmacology and UPLC-QTOF-MS/MS
Cited by: 10
Author(s): Xietao Ye, Jinlin Wu, Dayong Zhang, Zelun Lan, Songhong Yang, Jing Zhu, Ming Yang, Qingjie Gong, Lei Zhong
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2021.644140

The Mechanism of Lavender Essential Oil in the Treatment of Acute Colitis Based on “Quantity–Effect” Weight Coefficient Network Pharmacology
Cited by: 13
Author(s): Yao Wang, Junbo Zou, Yanzhuo Jia, Xiaofei Zhang, Changli Wang, Yajun Shi, Deliang Guo, Zhenfeng Wu, Wang Fang
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2021.622268

Comprehensive RNA-Seq Analysis of Potential Therapeutic Targets of Gan–Dou–Fu–Mu Decoction for Treatment of Wilson Disease Using a Toxic Milk Mouse Model
Cited by: 4
Author(s): Taohua Wei, Wenjie Hao, Lulu Tang, Huan Wu, Shi Huang, Yongmei Yang, Nannan Qian, Jie Liu, Weiren Yang, Xianchun Duan
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.657950

ATP2C2 Has Potential to Define Tumor Microenvironment in Breast Cancer
Cited by: 9
Author(s): Jiazhou Liu, Yu Wei, Yushen Wu, Jie Li, Jiazheng Sun, Guosheng Ren, Hongzhong Li
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.01730

Cold Acclimation Improves the Desiccation Stress Resilience of Polar Strains of Klebsormidium (Streptophyta)
Cited by: 10
Author(s): Martin Rippin, Nadine Borchhardt, Ulf Karsten, Burkhard Becker
Software Mentions: 1
Published: about 7 years ago

Projects: bioconductor: clusterProfiler

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Papers Mentioning clusterProfiler 2,223