Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: chromPlot

https://packages.ecosyste.ms/registries/bioconductor.org/packages/chromPlot

Global visualization tool of genomic data
1 version
Latest release: about 1 year ago
13,839 downloads total

Papers Mentioning chromPlot 7

10.7717/peerj-cs.251

<i>RIdeogram</i>: drawing SVG graphics to visualize and map genome-wide data on the idiograms
Cited by: 221
Author(s): Zhaodong Hao, Dekang Lv, Ying Ge, Jisen Shi, Dolf Weijers, Guangchuang Yu, Jinhui Chen
Software Mentions: 8
Published: almost 5 years ago

10.1093/bioinformatics/btx346

karyoploteR: an R/Bioconductor package to plot customizable genomes displaying arbitrary data
Cited by: 451
Author(s): Bernat Gel, Eduard Serra
Software Mentions: 7
Published: over 7 years ago

10.1371/journal.pone.0248213

De novo identification and targeted sequencing of SSRs efficiently fingerprints Sorghum bicolor sub-population identity
Cited by: 2
Author(s): John P. Baggett, Richard L. Tillett, Elizabeth A. Cooper, Melinda K. Yerka
Software Mentions: 4
Published: over 3 years ago

10.1016/j.csbj.2020.05.001

Rewired functional regulatory networks among miRNA isoforms (isomiRs) from let-7 and miR-10 gene families in cancer
Cited by: 11
Author(s): Tingming Liang, Leng Han, Li Guo
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12864-018-5317-2

Genome-wide association study for salinity tolerance at the flowering stage in a panel of rice accessions from Thailand
Cited by: 54
Author(s): Chakkree Lekklar, Monnat Pongpanich, Duangjai Suriya-arunroj, Aumnart Chinpongpanich, Helen Tsai, Luca Comai, Supachitra Chadchawan, Teerapong Buaboocha
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12864-021-07797-7

Transcriptome profiling of developing leaf and shoot apices to reveal the molecular mechanism and co-expression genes responsible for the wheat heading date
Cited by: 9
Author(s): Yuxin Yang, Xueying Zhang, Lifen Wu, Lichao Zhang, Guoxiang Liu, Chuan Xia, Lai Xu, Xiuying Kong
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-019-53901-z

Blood transcriptome analysis in a buck-ewe hybrid and its parents
Cited by: 1
Author(s): Clemens Falker‐Gieske, C. Knorr, Jens Tetens
Software Mentions: 3
Published: almost 5 years ago