Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bioinformatics/btx346

https://doi.org/10.1093/bioinformatics/btx346

karyoploteR: an R/Bioconductor package to plot customizable genomes displaying arbitrary data

Cited by: 451
Author(s): Bernat Gel, Eduard Serra
Published: over 7 years ago

Software Mentions 7

bioconductor: chromPlot
Global visualization tool of genomic data
Papers that mentioned: 7
bioconductor: ggbio
Visualization tools for genomic data
Papers that mentioned: 53
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
bioconductor: IdeoViz
Plots data (continuous/discrete) along chromosomal ideogram
Papers that mentioned: 3
bioconductor: karyoploteR
Plot customizable linear genomes displaying arbitrary data
Papers that mentioned: 50
bioconductor: regioneR
Association analysis of genomic regions based on permutation tests
Papers that mentioned: 30
pypi: Circos
Circos plots in Python!
Papers that mentioned: 2,252