Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: bigmelon
https://packages.ecosyste.ms/registries/bioconductor.org/packages/bigmelon
Illumina methylation array analysis for large experiments
1 version
Latest release: 7 months ago
10,569 downloads total
Papers Mentioning bigmelon 7
10.1093/bioinformatics/bty713
Bigmelon: tools for analysing large DNA methylation datasetsCited by: 47
Author(s): T.J. Gorrie-Stone, Melissa Smart, Ayden Saffari, Karim Malki, Eilís Hannon, Joe Burrage, Jonathan Mill, Meena Kumari, Leonard C Schalkwyk
Software Mentions: 13
Published: over 5 years ago
10.1371/journal.pgen.1009035
The DNA methylome of human sperm is distinct from blood with little evidence for tissue-consistent obesity associationsCited by: 12
Author(s): Fredrika Åsenius, T.J. Gorrie-Stone, Ama Brew, Yasmin Panchbhaya, Elizabeth Williamson, Leonard C Schalkwyk, Vardhman K. Rakyan, Michelle L. Holland, Sarah Marzi, David Williams
Software Mentions: 6
Published: over 3 years ago
10.1093/brain/awaa334
Recalibrating the epigenetic clock: implications for assessing biological age in the human cortexCited by: 86
Author(s): Gemma Shireby, Jonathan Davies, Paul T. Francis, Joe Burrage, Emma Walker, Grant W. A. Neilson, Aisha Dahir, Alan Thomas, Seth Love, Rebecca Smith, Katie Lunnon, Meena Kumari, Leonard C Schalkwyk, Kevin Morgan, Keeley Brookes, Eilís Hannon, Jonathan Mill
Software Mentions: 4
Published: over 3 years ago
10.1016/j.ajhg.2018.09.007
Leveraging DNA-Methylation Quantitative-Trait Loci to Characterize the Relationship between Methylomic Variation, Gene Expression, and Complex TraitsCited by: 118
Author(s): Eilís Hannon, T.J. Gorrie-Stone, Melissa Smart, Joe Burrage, Amanda Hughes, Yanchun Bao, Meena Kumari, Leonard C Schalkwyk, Jonathan Mill
Software Mentions: 3
Published: over 5 years ago
10.1186/s12864-019-5761-7
Guidance for DNA methylation studies: statistical insights from the Illumina EPIC arrayCited by: 175
Author(s): Georgina Mansell, T.J. Gorrie-Stone, Yanchun Bao, Meena Kumari, Leonard Schalkwyk, Jonathan Mill, Eilís Hannon
Software Mentions: 3
Published: about 5 years ago
10.1186/s13148-020-00984-5
Longitudinal data in peripheral blood confirm that PM20D1 is a quantitative trait locus (QTL) for Alzheimer’s disease and implicate its dynamic role in disease progressionCited by: 19
Author(s): Q Wang, Yinghua Chen, Benjamin Readhead, Kewei Chen, Yi Su, Eric M. Reiman, Joel T. Dudley
Software Mentions: 3
Published: over 3 years ago
10.1186/s13041-021-00810-w
Novel epigenetic clock for fetal brain development predicts prenatal age for cellular stem cell models and derived neuronsCited by: 14
Author(s): Leonard C. Steg, Gemma Shireby, Jennifer Imm, Jonathan Davies, Alison S. Franklin, Robert J. Flynn, Seema C. Namboori, Akshay Bhinge, Aaron R. Jeffries, Joe Burrage, Grant W. A. Neilson, Emma Walker, Leo Perfect, John Price, Gráinne McAlonan, Deepak P. Srivastava, Nicholas John Bray, Emma L Cope, Kimberley M Jones, Nicholas Denby Allen, Ehsan Pishva, Emma Dempster, Katie Lunnon, Jonathan Mill, Eilís Hannon
Software Mentions: 2
Published: almost 3 years ago