Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: batchelor
https://packages.ecosyste.ms/registries/bioconductor.org/packages/batchelor
Single-Cell Batch Correction Methods
1 version
Latest release: 7 months ago
5 dependent packages
200,045 downloads total
Papers Mentioning batchelor 9
10.3390/biomedicines9040368
Single-Cell RNA Sequencing in Parkinson’s DiseaseCited by: 13
Author(s): Shi-Xun Ma, Su Bin Lim
Software Mentions: 9
Published: about 3 years ago
10.1038/s42003-021-01897-6
Identification of a targetable KRAS-mutant epithelial population in non-small cell lung cancerCited by: 9
Author(s): Giorgia Maroni, Mahmoud A. Bassal, Indira Krishnan, Chee Wai Fhu, Virginia Savova, Rapolas Žilionis, Valerie A. Maymi, Nicole Pandell, Eva Csizmadia, Junyan Zhang, Barbara Storti, Julio Castaño, Riccardo Panella, Jia Li, Corinne E. Gustafson, Sam Fox, Rachel Levy, Claire Meyerovitz, Peter J. Tramontozzi, Kimberly Vermilya, Assunta De Rienzo, Stefania Crucitta, Daniela S. Bassères, Marla Weetall, Art Branstrom, Alessandra Giorgetti, Raffaele Ciampi, Marzia Del Re, Romano Danesi, Ranieri Bizzarri, Henry Yang, Olivier Kocher, Allon M. Klein, Robert S. Welner, Raphael Bueno, Maria Cristina Magli, John G. Clohessy, Azhar Ali, Daniel G. Tenen, Elena Levantini
Software Mentions: 7
Published: about 3 years ago
10.1186/s13287-021-02354-1
Single-cell RNA sequencing of cultured human endometrial CD140b+CD146+ perivascular cells highlights the importance of in vivo microenvironmentCited by: 11
Author(s): Dandan Cao, Rachel Chan, Ernest Hung Yu Ng, Kristina Gemzell‐Danielsson, William S.B. Yeung
Software Mentions: 6
Published: almost 3 years ago
10.1084/jem.20192386
Transcription cofactor GRIP1 differentially affects myeloid cell–driven neuroinflammation and response to IFN-β therapyCited by: 4
Author(s): Sanda Mimouna, David A. Rollins, Gayathri Shibu, Bowranigan Tharmalingam, Dinesh K Deochand, Xi Chen, David J. Oliver, Yurii Chinenov, Inez Rogatsky
Software Mentions: 6
Published: over 3 years ago
10.1186/s13059-021-02414-y
Coordinated changes in gene expression kinetics underlie both mouse and human erythroid maturationCited by: 38
Author(s): Melania Barile, Iván Imaz-Rosshandler, Isabella Inzani, Shila Ghazanfar, Jennifer Nichols, John C. Marioni, Carolina Guibentif, Berthold Göttgens
Software Mentions: 5
Published: almost 3 years ago
10.1371/journal.pbio.3000704
Single-cell mapping reveals new markers and functions of lymphatic endothelial cells in lymph nodesCited by: 83
Author(s): Noriki Fujimoto, Yuliang He, Marco D’Addio, Carlotta Tacconi, Michael Detmar, Lothar C. Dieterich
Software Mentions: 5
Published: about 4 years ago
10.3389/fcvm.2020.00052
A Single-Cell Transcriptional Roadmap of the Mouse and Human Lymph Node Lymphatic VasculatureCited by: 86
Author(s): Menglan Xiang, Rubén Adrián Grosso, Akiko Takeda, Junliang Pan, Tove Bekkhus, Kevin Brulois, Denis Đermadi, Sofia Nordling, Michael Vanlandewijck, Sirpa Jalkanen, Maria H. Ulvmar, Eugene C. Butcher
Software Mentions: 5
Published: about 4 years ago
10.1126/sciimmunol.abc3582
TMPRSS2 and TMPRSS4 promote SARS-CoV-2 infection of human small intestinal enterocytesCited by: 754
Author(s): Ruochen Zang, María Florencia Gómez Castro, Broc T. McCune, Qiru Zeng, Paul W. Rothlauf, Naomi Sonnek, Zhuoming Liu, Kevin Brulois, Xin Wang, Harry B. Greenberg, Michael S. Diamond, Matthew A. Ciorba, Sean P. J. Whelan, Siyuan Ding
Software Mentions: 5
Published: about 4 years ago
10.7554/eLife.59545
Specific Neuroligin3–αNeurexin1 signaling regulates GABAergic synaptic function in mouse hippocampusCited by: 18
Author(s): Motokazu Uchigashima, Kohtarou Konno, Emily Demchak, Amy Cheung, Takuya Watanabe, David G Keener, Manabu Abe, Timmy Le, Kenji Sakimura, Toshikuni Sasaoka, Takeshi Uemura, Yuka Imamura Kawasawa, Masahiko Watanabe, Kensuke Futai
Software Mentions: 3
Published: over 3 years ago