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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s13059-021-02414-y

https://doi.org/10.1186/s13059-021-02414-y

Coordinated changes in gene expression kinetics underlie both mouse and human erythroid maturation

Cited by: 38
Author(s): Melania Barile, Iván Imaz-Rosshandler, Isabella Inzani, Shila Ghazanfar, Jennifer Nichols, John C. Marioni, Carolina Guibentif, Berthold Göttgens
Published: about 4 years ago

Software Mentions 5

bioconductor: batchelor
Single-Cell Batch Correction Methods
Papers that mentioned: 9
Very Likely Science (90)
bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
Very Likely Science (100)
pypi: batchelor
A simple, yet effective batching system using threadpoolexecutor.
Papers that mentioned: 9
Likely Science (40)
pypi: scanpy
Single-Cell Analysis in Python.
Papers that mentioned: 68
Very Likely Science (100)
pypi: velocyto
RNA velocity analysis for single cell RNA-seq data
Papers that mentioned: 25
Very Likely Science (90)